mRNA_P-fluviatile_contig18.3379.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig18.3379.1 vs. uniprot
Match: D7FPU7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPU7_ECTSI) HSP 1 Score: 475 bits (1223), Expect = 1.730e-161 Identity = 235/273 (86.08%), Postives = 251/273 (91.94%), Query Frame = 1
Query: 88 MKSAVMAVACASGVQGFVSPNLAVNSRVAPSAPKTTMMAEVPGSWWTPSDGSKSEALPWADKPVIGDGTLAGDAGFDPLNLANGPADLVWLRTAELKHGRICMLACVGMVAPELVQNPVGFNGFDFAPEFTQMNAFAALSSVPRLGLAQIVLFCSLIEVASFTGNLTSKYAYEDDLTKQELRYKEQGKTQFLAGAAKIASVSANKDQVFEETVVPGDLGFDPLGLAANGINPDYELAELKHARLAMIGFLGMAVQQAVDPNGGVLEQFMNWAA 906
MKSAVMA AC S FV+P+L V+SRVA SAPKTTMMAEVPGSWWTPSDG+KS ALPWADKP+IGDG + GDAGFDPLNLANGPADLVWLRTAELKHGRICMLACVGMVAPELVQ+PVGF+GF+FAPEFTQMNAFAALSSVPRLGLAQIV+ CSLIEVASFTGNLT KY YEDDLTK EL+ K GKT +LAGAAKIA V+ NKDQVFE+TV+PGDLGFDPLGLAANGINPDY LAELKHARLAMIGFLGMAVQQAVDPNGGVLEQFMNWA+
Sbjct: 1 MKSAVMAAACVSSASAFVAPSL-VSSRVASSAPKTTMMAEVPGSWWTPSDGTKSVALPWADKPLIGDGDMVGDAGFDPLNLANGPADLVWLRTAELKHGRICMLACVGMVAPELVQHPVGFSGFEFAPEFTQMNAFAALSSVPRLGLAQIVILCSLIEVASFTGNLTEKYLYEDDLTKLELKNKSLGKTDYLAGAAKIAPVTENKDQVFEDTVIPGDLGFDPLGLAANGINPDYALAELKHARLAMIGFLGMAVQQAVDPNGGVLEQFMNWAS 272
BLAST of mRNA_P-fluviatile_contig18.3379.1 vs. uniprot
Match: A0A835Z6C4_9STRA (Light harvesting complex protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C4_9STRA) HSP 1 Score: 260 bits (665), Expect = 9.520e-78 Identity = 146/295 (49.49%), Postives = 187/295 (63.39%), Query Frame = 1
Query: 88 MKSAVMAVACASGVQGFVSPNLAVNSRVA-PSAPKTTMMAEVP--------------GSWWTPSDGSKSEALPWADKPVIGDGTLAGDAGFDPLNLANGPADLVWLRTAELKHGRICMLACVGMVAPELVQNPVGFNGFDFAPEFTQMNAFAALSSVPRLGLAQIVLFCSLIEVASFTGNLTSKYAYEDDLTKQELRYKEQGKTQFLAGAAKIASVSANK-----DQVFEE--TVVPGDLGFDPLGLAANGINPDYELAELKHARLAMIGFLGMAVQQAVDPNGGVLEQFMNWAA 906
MK+A +A+ GV + +P++ + +AP + A P G+W+ D + S +LPW KPVIGDG + GD GFDPL+L+ D+ WLR AELKHGR+CMLA VG+V PELVQ+PVGF+GF F EFTQMNA AAL +VP+ GLAQIVL C LIE+A+F N S + YED L+ E E + FL G AK S + NK + FE+ + GDLGFDPLGLAANG+ DY LAE+KHARLAMIG LGM + Q +P+ GVL+Q ++WAA
Sbjct: 1 MKAAAVALVACGGVAAYQAPSMVFGKKSGGAAAPAKSAKAAGPPAFLRETEPGQGAAGAWYVREDPTLSTSLPWVTKPVIGDGDMIGDVGFDPLSLSK-TFDISWLRAAELKHGRVCMLAAVGLVTPELVQHPVGFDGFSFPAEFTQMNAIAALGAVPKFGLAQIVLACGLIEIATFGSNYNSAFNYEDGLSLLERAKLEGNERTFLTGVAKTTS-NINKFGNALEVGFEKPGSDNAGDLGFDPLGLAANGVRSDYALAEIKHARLAMIGVLGMLLGQFYEPSKGVLQQTLDWAA 293
BLAST of mRNA_P-fluviatile_contig18.3379.1 vs. uniprot
Match: A0A7S1XTT1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTT1_9STRA) HSP 1 Score: 247 bits (630), Expect = 2.570e-72 Identity = 128/223 (57.40%), Postives = 156/223 (69.96%), Query Frame = 1
Query: 229 PSDGSKSEALPWADKPVIGDGTLAGDAGFDPLNLANGPADLVWLRTAELKHGRICMLACVGMVAPELVQNPVGFNGFDFAPEFTQMNAFAALSSVPRLGLAQIVLFCSLIEVASFTGNLTSKYAYEDDLTKQELRYKEQGKTQFLAGAAKIASVSANKDQVFEETVVP----GDLGFDPLGLAANGINPDYELAELKHARLAMIGFLGMAVQQAVDPNGGVLE 885
P DG S ALPW+DKPVIGDGTLAGD GFDP NL++ L WLR AELKHGR+CMLA VG+VAPEL Q+P+GF G FAPEFT+MNAF AL++ P LGLAQI+LFC L+E+ +F + Y+D LTK E + G +FL G AK A + + T V GD+GFDPLG A NG+NPDY LAELKH R+AM+G LGM +QQ+ P+ G+LE
Sbjct: 62 PVDGM-SAALPWSDKPVIGDGTLAGDQGFDPWNLSS-VFPLTWLRAAELKHGRVCMLAAVGLVAPELFQHPIGFEGLKFAPEFTEMNAFKALNTAPGLGLAQILLFCGLVEIFTFGKAYDGTFTYDDGLTKIEKEDIDAGAFKFLTGGAKNAVAADTASKFDGLTTVDEGRAGDIGFDPLGFADNGVNPDYALAELKHGRVAMLGVLGMLIQQSKTPDFGLLE 282
BLAST of mRNA_P-fluviatile_contig18.3379.1 vs. uniprot
Match: W7TZB5_9STRA (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZB5_9STRA) HSP 1 Score: 243 bits (619), Expect = 5.730e-71 Identity = 141/299 (47.16%), Postives = 183/299 (61.20%), Query Frame = 1
Query: 88 MKSAVMAVACASGVQGFVSPNLAV-------------NSRVAPSAPKTTMMAEV-PGS-----WWTPSDGSKSEALPWADKPVIGDGTLAGDAGFDPLNLANGPADLVWLRTAELKHGRICMLACVGMVAPELVQNPVGFNGFDFAPEFTQMNAFAALSSVPRLGLAQIVLFCSLIEVASFTGNLTSKYAYEDDLTKQELRYKEQGKTQFLAGAAKI-ASVSANK-----DQVFE--ETVVPGDLGFDPLGLAANGINPDYELAELKHARLAMIGFLGMAVQQAVDPNGGVLEQFMNWA 903
MK+AV+ ++ G Q F++PN V ++ +A + EV PGS W+ D + S ALPW +P IGDG+L GD GFDP L+ D+ WLR AELKHGR+ MLA +GMV PELVQ P GF GF FAPEF+++NA ALS+VP LGLAQI+L S +EVA+F+ ++ +ED+LT E + QG+ L+GAAK A N D F+ E VPGDLGFDP+G NGINPDY LAE+KHARLAM+G GM +Q+ + P G +L Q + WA
Sbjct: 1 MKTAVLFLSGLVGAQAFLTPNARVPAATKMEAIKAGKGAKAGKAATANNYLKEVEPGSGPLGKWYVRDDPTLSTALPWVTRPEIGDGSLVGDFGFDPFGLSK-IFDVNWLRNAELKHGRLAMLATLGMVTPELVQAPAGFEGFKFAPEFSELNAIKALSAVPTLGLAQIILAISFVEVATFSKVYNERFTFEDNLTPLERKKVVQGRFSDLSGAAKTQAKAGVNPFGNAVDVGFQDPEKFVPGDLGFDPVGFTDNGINPDYALAEIKHARLAMLGAAGMLIQEFLQPKG-ILSQTVEWA 297
BLAST of mRNA_P-fluviatile_contig18.3379.1 vs. uniprot
Match: A0A7R9U4N3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4N3_9STRA) HSP 1 Score: 236 bits (603), Expect = 9.520e-69 Identity = 124/229 (54.15%), Postives = 151/229 (65.94%), Query Frame = 1
Query: 214 GSWWTPSDGSKSEALPWADKPVIGDGTLAGDAGFDPLNLANGPADLVWLRTAELKHGRICMLACVGMVAPELVQNPVGFNGFDFAPEFTQMNAFAALSSVPRLGLAQIVLFCSLIEVASFTGNLTSKYAYEDDLTKQELRYKEQGKTQFLAGAAKIASVSANKDQVFE-----ETVVPGDLGFDPLGLAANGINPDYELAELKHARLAMIGFLGMAVQQAVDPNGGVLE 885
G W + S+ALPW+DKPVIGDG LAGD GFDP L+ L WLR AE+KHGR+CMLA VG++APELVQNPVG+ G F P F +MNAF AL +VP LGLAQIVL L+E+ S N + ++D LT E + G +FL G AK A + K + FE E V PGDLGFDPLG A +GI P++ AE+KHARLAM+G LGM +QQA P G+LE
Sbjct: 56 GQWLPKTKEGMSQALPWSDKPVIGDGNLAGDRGFDPWGLSK-IFPLAWLRAAEIKHGRVCMLAAVGLIAPELVQNPVGYEGLQFDPVFQEMNAFKALGTVPGLGLAQIVLVAGLVEIFSIKSNYEGTFTFDDGLTSIERSDIDSGAFKFLTGGAKNALAADTKSK-FETLQVTEQVSPGDLGFDPLGFADDGIKPEFAEAEIKHARLAMLGTLGMLIQQAKTPEFGLLE 282
BLAST of mRNA_P-fluviatile_contig18.3379.1 vs. uniprot
Match: A0A0G4G8I9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G8I9_VITBC) HSP 1 Score: 221 bits (562), Expect = 1.060e-62 Identity = 117/237 (49.37%), Postives = 157/237 (66.24%), Query Frame = 1
Query: 214 GSWWTPSDGSKSEALPWADKPVIGDGTLAGDAGFDPLNLANGPADLVWLRTAELKHGRICMLACVGMVAPELVQNPVGFNGFDFAPEFTQMNAFAALSSVPRLGLAQIVLFCSLIEV--ASFTGNLTSKYAYEDDLTKQELRYKEQGKTQFLAGAAKIASVSANKDQVFEE-----TVVPGDLGFDPLGLAANGINPDYELAELKHARLAMIGFLGMAVQQAVDPNGGVLEQFMNWA 903
G W+ D + S ALPW +P IGDG L GD GFDP L+ ++ WLR AELKHGR+CMLA VG++APELVQ P GF G DF P F++++ + AL+++P G+AQI++ +LIE+ A + N T+K D LT +E + G T+FLAG A A + ++ EE + VPGDLG+DPLGLA NGI D+ LAE+KHARLAMIG LGM +Q ++PN +L+Q + WA
Sbjct: 62 GQWYVRDDPNISPALPWVSRPTIGDGNLVGDFGFDPFGLSK-LVNIQWLRNAELKHGRVCMLASVGLLAPELVQRPEGFKGIDFVPAFSELSPYKALTALPPAGIAQIIIAIALIELTTAKYLYNPTTKIKLAD-LTLRERALVQTGNTRFLAGGA-FAELGRLGEERIEERPDAVSRVPGDLGWDPLGLADNGIREDWALAEIKHARLAMIGTLGMMLQAFIEPNKPILQQTIEWA 295
BLAST of mRNA_P-fluviatile_contig18.3379.1 vs. uniprot
Match: A0A0G4FH94_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FH94_VITBC) HSP 1 Score: 208 bits (530), Expect = 2.260e-58 Identity = 118/232 (50.86%), Postives = 151/232 (65.09%), Query Frame = 1
Query: 229 PSDGSKSEALPWADKPVIGDGTLAGDAGFDPLNLANGPADLVWLRTAELKHGRICMLACVGMVAPELVQNPVGFNGFDFAPEFTQMNAFAALSSVPRLGLAQIVLFCSLIEV--ASFTGNLTSKYAYEDDLTKQELRYKEQGKTQFLAGAAKIASVSANKDQVFEETV----VPGDLGFDPLGLAANGINPDYELAELKHARLAMIGFLGMAVQQAVDPNGGVLEQFMNWAA 906
PSD S ALPW KP IGDGTL GD GFDPL L+ AD+ +LR AELKHGR+CMLA VG++APELVQ P GF+G +F P F++MN F AL ++P GL QI++ +LIE+ A F + + K D K+ L + G T+FLAG+A+ S + V E++ VPGDLGFDPLGLA GI D+ LAE+KH RLAM+ LGM +Q P+ G+LE +W A
Sbjct: 49 PSDVSL--ALPWVAKPQIGDGTLVGDFGFDPLGLSK-IADVGFLRNAELKHGRLCMLAAVGLLAPELVQKPAGFDGLEFVPAFSEMNPFKALFAMPPAGLMQILIAIALIELNTAKFLWDPSMKMRITDMSEKERLLV-QTGNTRFLAGSARPQLASLGNEVVMEKSGMFSRVPGDLGFDPLGLADEGIREDWALAEIKHGRLAMLAVLGMLLQVGARPDKGILEMTGDWLA 276
BLAST of mRNA_P-fluviatile_contig18.3379.1 vs. uniprot
Match: A0A0G4HNT2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HNT2_9ALVE) HSP 1 Score: 177 bits (448), Expect = 1.480e-46 Identity = 101/231 (43.72%), Postives = 129/231 (55.84%), Query Frame = 1
Query: 214 GSWWTPSDGSKSEALPWADKPVIGDGTLAGDAGFDPLNLANGPADLVWLRTAELKHGRICMLACVGMVAPELVQNPVGFNGFDFAPEFTQMNAFAALSSVPRLGLAQIVLFCSLIEVASFTGNLTSKYAYEDDLTKQELRYKEQGKTQFLAGAAKIASVSANKDQVFEETVVPGDLGFDPLGLAANGINPDYELAELKHARLAMIGFLGMAVQQAVDPNGGVLEQFMNWAA 906
G+W+ D S++ PW K I DGTLAGD GFDPL L+ D W+RTAELKHGRI MLACVG++ PEL+ P GF G +F P F + AL P LG+ QI L +LIE T KY K + Y + ++ K + D+ FE+ PG +GFDP G A NGI D+ AE+KHARLAM+G GM +Q + P+ +LEQ WAA
Sbjct: 84 GAWYIVQDPEISKSAPWVKKEQIYDGTLAGDYGFDPLRLSER-RDAWWMRTAELKHGRIAMLACVGLLTPELILKPEGFKGLNFVPAFDAVAPLEALRKAPPLGILQIALVLALIEFQ------TLKYV------KNPMEYLQP----YMDKGIKFS------DEYFEKRT-PGSIGFDPAGFADNGIRSDFAEAEIKHARLAMVGAAGMLIQSLIKPDMPILEQTSKWAA 290
BLAST of mRNA_P-fluviatile_contig18.3379.1 vs. uniprot
Match: A0A7S1TMR6_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TMR6_9RHOD) HSP 1 Score: 133 bits (335), Expect = 4.350e-32 Identity = 82/220 (37.27%), Postives = 113/220 (51.36%), Query Frame = 1
Query: 241 SKSEALPWADKPVIGDGTLAGDAGFDPLNLANGPADLVWLRTAELKHGRICMLACVGMVAPELVQNPVGFNGFDFAPEFTQMNAFAALSSVPRLGLAQIVLFCSLIEVASFTGNLTSKYAYEDDLTKQELRYKEQGKTQFLAGAAKIASVSANKDQVFEETVVPGDLGFDPLGLAANGINPDYELAELKHARLAMIGFLGMAVQQAVDPNGGVLEQFMNW 900
+KS+A+P+ +KP DG+LAGDAGFDPL L+ +L +LR AELKHGRICMLA +G V E+V+ P P F + +A A+ VP QI+ F S+IE+ +F N ++++ PGD GFDPL L +G+ Y+L E+K+ RLAMI F+G QQ V G V+EQ N+
Sbjct: 31 AKSQAIPFLEKPDTLDGSLAGDAGFDPLRLSKY-LNLKYLRAAELKHGRICMLATLGWVVQEIVRLP--------GPMFQEKHALQAIYKVPLASWVQIIAFISIIELVTFRSN-------------------------------------------YDDSSAPGDYGFDPLNLGKSGVIERYQLNEIKNGRLAMIAFMGFLFQQLVTGQG-VIEQLANF 197
BLAST of mRNA_P-fluviatile_contig18.3379.1 vs. uniprot
Match: A0A8J6CE65_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CE65_DIALT) HSP 1 Score: 131 bits (330), Expect = 6.000e-31 Identity = 93/227 (40.97%), Postives = 112/227 (49.34%), Query Frame = 1
Query: 226 TPSDGSKSEALPWADKPVIGDGTLAGDAGFDPLNLANGPADLVWLRTAELKHGRICMLACVGMVAPELVQNPVGFNGFDFAPEF--TQMNAFAALSSVPRLGLAQIVLFCSLIEVASFTGNLTSKYAYEDDLTKQELRYKEQGKTQFLAGAAKIASVSANKDQVFEETVVPGDLGFDPLGLAANGINPDYELAELKHARLAMIGFLGMAVQQAVDPNGGVLEQFMNW 900
T S S ++P+A KP DGTL GD GFDPL L+N D+ WLR AE+KHGR+ MLA G LVQ G PE T ALS+ P LGLAQIV LIE+ + + L + YED L A S PGDLG+DPLGL+A G+N DY +AELKH RLAM+G GM V + EQ +W
Sbjct: 41 TASPVEYSASIPFAPKPAKLDGTLLGDIGFDPLGLSN-LWDIKWLRAAEIKHGRVGMLAATGF----LVQEGYRLPGPASNPELFATAKTPLEALSTAPPLGLAQIVALIFLIELVTSSSLLITDSFYEDSPN--------------LKAPAGSGS--------------PGDLGWDPLGLSAGGLNLDYAIAELKHGRLAMLGAAGMLAGSLVSGKS-ISEQTYDW 233 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3379.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3379.1 >prot_P-fluviatile_contig18.3379.1 ID=prot_P-fluviatile_contig18.3379.1|Name=mRNA_P-fluviatile_contig18.3379.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=274bp MKSAVMAVACASGVQGFVSPNLAVNSRVAPSAPKTTMMAEVPGSWWTPSDback to top mRNA from alignment at P-fluviatile_contig18:2658753..2663137- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig18.3379.1 ID=mRNA_P-fluviatile_contig18.3379.1|Name=mRNA_P-fluviatile_contig18.3379.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4385bp|location=Sequence derived from alignment at P-fluviatile_contig18:2658753..2663137- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig18:2658753..2663137- >mRNA_P-fluviatile_contig18.3379.1 ID=mRNA_P-fluviatile_contig18.3379.1|Name=mRNA_P-fluviatile_contig18.3379.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1644bp|location=Sequence derived from alignment at P-fluviatile_contig18:2658753..2663137- (Porterinema fluviatile SAG_2381)back to top |