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Homology
BLAST of mRNA_P-fluviatile_contig18.3345.1 vs. uniprot
Match: D8LI10_ECTSI (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI10_ECTSI) HSP 1 Score: 392 bits (1008), Expect = 1.980e-131 Identity = 197/226 (87.17%), Postives = 210/226 (92.92%), Query Frame = 2
Query: 38 MAGPSPLAVLFYYPNLIGYARIIAVLSSFYLADTNWKFSFMCYVLAFAGDAVDGAVARYFNQSSQFGAVLDMVTDRCSTAGLLMVLSRLYGGGAPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFIPEASVVLRAGGAVLSLRAVCYFVFLPACVCKQAVNVAQLCAAALSLALVESERSDAGSKKK 715
MAGPSP AVLFY+PNLIGYARIIAVL+S+YLADTNWK SF+CYVLAF GDAVDGAVARYFNQSS+FGAVLDMVTDRCSTAGLLMVLSRLY GG PAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVF+PEAS+ L GGA +SL AVCY+VFLPACVCKQAVNVAQLCAA+LSLA ESE +D + K+
Sbjct: 1 MAGPSPWAVLFYFPNLIGYARIIAVLASYYLADTNWKASFVCYVLAFVGDAVDGAVARYFNQSSKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFVPEASLALGGGGAAVSLHAVCYYVFLPACVCKQAVNVAQLCAASLSLASAESEAADGVASKQ 226
BLAST of mRNA_P-fluviatile_contig18.3345.1 vs. uniprot
Match: A0A835ZHK8_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK8_9STRA) HSP 1 Score: 257 bits (656), Expect = 9.930e-79 Identity = 138/219 (63.01%), Postives = 162/219 (73.97%), Query Frame = 2
Query: 38 MAGPSPLAVLFYYPNLIGYARIIAVLSSFYLADTNWKFSFMCYVLAFAGDAVDGAVARYFNQSSQFGAVLDMVTDRCSTAGLLMVLSRLYGGGAPAFLFLLLMFIDLFSHWMHVQSTAGR-HHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFIPEASVVLRAGGAVLSLRAVCYFVFLPACVCKQAVNVAQLCAAALSLALVESER 691
MA SP AV YYPNLIGY+RI AVL+S+Y+A TNWK S YVLAFAGD VDGAVAR FNQSS FGA LDMVTDRCSTAG+L VL+ LY A AF F+ LMF+D+FSHW+HV S A + HHKAA TL RN + RLFY CYPFF +CCV TE FY+ LY+L F +A + GG + L + ++ LPACVCKQAVN+AQLCAAA S+A V+ R
Sbjct: 1 MASESPYAVFLYYPNLIGYSRIAAVLASYYVAGTNWKLSVCFYVLAFAGDVVDGAVARRFNQSSSFGATLDMVTDRCSTAGMLFVLAGLYP--AYAFHFMCLMFLDIFSHWIHVASVATKGHHKAAGTLQGRNWLIRLFYSCYPFFGYCCVFTEFFYICLYMLAFNKDAFI--TVGGVEVHLWQLTFYGCLPACVCKQAVNIAQLCAAAYSMAEVDVAR 215
BLAST of mRNA_P-fluviatile_contig18.3345.1 vs. uniprot
Match: D7FMQ7_ECTSI (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMQ7_ECTSI) HSP 1 Score: 224 bits (570), Expect = 3.390e-66 Identity = 122/203 (60.10%), Postives = 148/203 (72.91%), Query Frame = 2
Query: 89 GYARIIAVLSSFYLADTNWKFSFMCYVLAFAGDAVDGAVARYFNQSSQFGAVLDMVTDRCSTAGLLMVLSRLYGGGAPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFIPEASVVLRAGGAVLSLRAVCYFVFLPACVCKQAVNVAQLCAAALSLALVESERSD 697
GYAR+ VL+S+YLA+TNWK S Y++AFAGDAVDG VAR F Q+S+FGAVLDMVTDRCSTAGLL+VLSRLY AF FL+LMFIDLFSHWMH S +HHK+ TL RN++ R +Y PFFAFCC+G ELFYV LYLL F+ E S A LR C+++ LPACV KQ VN+AQ+ +AA LAL E ++ +
Sbjct: 9 GYARVALVLASYYLAETNWKASSCFYLVAFAGDAVDGHVARKFKQASRFGAVLDMVTDRCSTAGLLLVLSRLYDR-RHAFAFLVLMFIDLFSHWMHTHSVVEKHHKSTATLKRRNMLIRTYYDNLPFFAFCCIGAELFYVLLYLLHFVSEES------RAFAPLRTSCFWLCLPACVLKQFVNIAQIFSAASCLALEELDQKE 204
BLAST of mRNA_P-fluviatile_contig18.3345.1 vs. uniprot
Match: A0A6H5JEV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV5_9PHAE) HSP 1 Score: 206 bits (524), Expect = 6.330e-58 Identity = 117/213 (54.93%), Postives = 147/213 (69.01%), Query Frame = 2
Query: 59 AVLFYYPNLIGYARIIAVLSSFYLADTNWKFSFMCYVLAFAGDAVDGAVARYFNQSSQFGAVLDMVTDRCSTAGLLMVLSRLYGGGAPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFIPEASVVLRAGGAVLSLRAVCYFVFLPACVCKQAVNVAQLCAAALSLALVESERSD 697
+VL YYPNLIGYAR+ VL+S+YLA+TNWK S Y++AFAGD VDG VAR F Q+S+FGAVLDMVTDRCSTAGLL+VLSRLY AF FL+L+ ++ +HHK+ TL RN++ R +Y PFFAFCC+G ELFYV LYLL F+ E S A LR C+++ LPACV KQ VN+AQ+ +AA LAL E ++ +
Sbjct: 126 SVLLYYPNLIGYARVALVLASYYLAETNWKASSCFYLVAFAGDVVDGHVARKFKQASRFGAVLDMVTDRCSTAGLLLVLSRLYDR-RHAFAFLVLIVVE-------------KHHKSTATLKRRNILIRTYYDNLPFFAFCCIGAELFYVLLYLLHFVSEES------RAFTPLRTSCFWLCLPACVLKQFVNIAQIFSAASCLALEELDQKE 318
BLAST of mRNA_P-fluviatile_contig18.3345.1 vs. uniprot
Match: A0A5D6XI13_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI13_9STRA) HSP 1 Score: 197 bits (502), Expect = 4.700e-56 Identity = 114/222 (51.35%), Postives = 145/222 (65.32%), Query Frame = 2
Query: 50 SPLAVLFYYPNLIGYARIIAVLSSFYLADTNWKFSFMCYVLAFAGDAVDGAVARYFNQSSQFGAVLDMVTDRCSTAGLLMVLSRLYGGGAPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFIPEASVVLRAGGAVLSLRAVCYFVFLPACVCKQAVNVAQLCAAALSLALVESERSDAGSKKK 715
SP AV FY PNLIGYAR+ S +A T+ + S CY L+F D DG AR+F+Q S FGAVLDMVTDRCSTAGLL++LS LY AFLFLL++ D SHW H+ ++ G H A A+RN++ R++YG YPFF FCCVGTELFY+ LY+L F P A + G + L +CY+V PACV K +N+AQL +AA ++A+ E A SK K
Sbjct: 8 SPTAVFFYVPNLIGYARVALTAYSLAVAQTSPRASVTCYALSFVCDYFDGFFARWFDQCSNFGAVLDMVTDRCSTAGLLVILSHLYPQYMLAFLFLLIL--DFSSHWYHMYASKGHHKTVA---AERNLLLRVYYGNYPFFGFCCVGTELFYILLYVLHFFPTALI----PGVDVPLAQLCYYVCGPACVLKNLINIAQLTSAAHAVAV---EDVKAASKTK 217
BLAST of mRNA_P-fluviatile_contig18.3345.1 vs. uniprot
Match: A0A0N7L8K7_PLAHL (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L8K7_PLAHL) HSP 1 Score: 196 bits (499), Expect = 1.170e-55 Identity = 113/218 (51.83%), Postives = 143/218 (65.60%), Query Frame = 2
Query: 26 SERAMAGPSPLAVLFYYPNLIGYARIIAVLSSFYLADTNWKFSFMCYVLAFAGDAVDGAVARYFNQSSQFGAVLDMVTDRCSTAGLLMVLSRLYGGGAPAF--LFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFIPEASVVLRAGGAVLSLRAVCYFVFLPACVCKQAVNVAQLCAAALSLA 673
+ER + G V FY PNLIGY R++ L S +A TN+K S +CY L+F D DG AR NQSS +GAVLDMVTDRCSTAGLL+VLS LY P + +FL L+ +D SHW H+ S+ G HHK A+RN + R +YG YPFF FCCVG ELFY+ LY+L F P + + V+ L C++V LPAC+CK VN+AQLC+AA S+A
Sbjct: 2 TERTVMG-----VFFYVPNLIGYMRVLLTLYSLAVAFTNYKVSVLCYALSFTCDYFDGFFARLCNQSSTYGAVLDMVTDRCSTAGLLLVLSHLY----PQYWIIFLYLLILDFSSHWYHMYSSRG-HHKVVS--AERNFVLRFYYGFYPFFGFCCVGAELFYILLYVLHFNPTVLIPI-VNVPVMKL---CFYVCLPACICKNIVNLAQLCSAASSIA 203
BLAST of mRNA_P-fluviatile_contig18.3345.1 vs. uniprot
Match: M4C1S7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1S7_HYAAE) HSP 1 Score: 196 bits (499), Expect = 6.730e-55 Identity = 109/203 (53.69%), Postives = 136/203 (67.00%), Query Frame = 2
Query: 62 VLFYYPNLIGYARIIAVLSSFYLADTNWKFSFMCYVLAFAGDAVDGAVARYFNQSSQFGAVLDMVTDRCSTAGLLMVLSRLYGGGAPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFIPEASVVLRAGGAVLSLRAVCYFVFLPACVCKQAVNVAQLCAAALSL 670
V Y PNLIGY R++ L S +A +++K S +CYVL+F D DG AR NQ S FGAVLDMVTDRCSTAGLL+VLS LY F++LL++ D SHW+H+ S+ G HHK A+RN + R +Y CYPFF FCCVGTELFY+ LY+L F P L G + + +CY+V LPACVCK NVAQLC+AA S+
Sbjct: 66 VFLYVPNLIGYMRVVLSLYSLAIARSDYKTSVLCYVLSFICDYFDGFFARLCNQCSSFGAVLDMVTDRCSTAGLLVVLSHLYPQYMVCFIYLLVL--DFSSHWLHMYSSRG-HHKVVP--AERNFLLRFYYSCYPFFGFCCVGTELFYILLYVLHFDPA----LMIPGINVPVMQLCYYVCLPACVCKTMTNVAQLCSAAHSV 259
BLAST of mRNA_P-fluviatile_contig18.3345.1 vs. uniprot
Match: A0A067BHE0_SAPPC (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BHE0_SAPPC) HSP 1 Score: 194 bits (493), Expect = 7.740e-55 Identity = 107/210 (50.95%), Postives = 141/210 (67.14%), Query Frame = 2
Query: 62 VLFYYPNLIGYARIIAVLSSFYLADTNWKFSFMCYVLAFAGDAVDGAVARYFNQSSQFGAVLDMVTDRCSTAGLLMVLSRLYGGGAPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFIPEASVVLRAGGAVLSLRAVCYFVFLPACVCKQAVNVAQLCAAALSLALVESER 691
V Y PNLIGY R+ SFY+A+T+WK S +CY +F D DG AR+FNQ S FGAVLDMVTDRCSTAGLL++LS LY AFLFLL++ D SHW H+ ++ G HHK+ ++ +NV+ R++YGCYP F +CCVG E FY+ LY+L F P +V AG L L ++ ++ PACV K +NVAQL +AA S+A + E+
Sbjct: 7 VYLYIPNLIGYVRVALTAYSFYVAETDWKTSIICYAFSFICDYFDGFFARWFNQCSTFGAVLDMVTDRCSTAGLLVILSHLYPAYKLAFLFLLVL--DFSSHWYHMYASRG-HHKSIES--KKNVLLRVYYGCYPLFGYCCVGAEFFYILLYVLSFEPTLAV---AG---LPLASIAWYGCFPACVMKNIINVAQLASAAASVAEFDYEQ 205
BLAST of mRNA_P-fluviatile_contig18.3345.1 vs. uniprot
Match: A0A485L0Z3_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0Z3_9STRA) HSP 1 Score: 193 bits (490), Expect = 2.250e-54 Identity = 103/204 (50.49%), Postives = 135/204 (66.18%), Query Frame = 2
Query: 62 VLFYYPNLIGYARIIAVLSSFYLADTNWKFSFMCYVLAFAGDAVDGAVARYFNQSSQFGAVLDMVTDRCSTAGLLMVLSRLYGGGAPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFIPEASVVLRAGGAVLSLRAVCYFVFLPACVCKQAVNVAQLCAAALSLA 673
V FY PNLIGY R+ SFY+A +W+ + +CY ++F D DG AR+FNQ S FGAVLDMVTDRCSTAGLL++LS LY FLFL M +D SHW H+ ++ G HHK+ D +NV+ R++YGCYP F +CCVG E +++ Y+L F P + G LS+ +C +V LPACV K +NVAQLC+AA S+A
Sbjct: 6 VYFYIPNLIGYTRVALTAYSFYVALDDWQTAIVCYAISFICDFFDGYFARWFNQCSTFGAVLDMVTDRCSTAGLLVILSHLYPDQKLVFLFL--MVLDFSSHWYHMYASRG-HHKSID--GKKNVLLRVYYGCYPLFGYCCVGAEFYFILRYVLAFEPTLVI----PGIDLSVALLCNYVCLPACVIKNIINVAQLCSAAASVA 200
BLAST of mRNA_P-fluviatile_contig18.3345.1 vs. uniprot
Match: A0A8K1FF61_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF61_PYTOL) HSP 1 Score: 192 bits (489), Expect = 3.250e-54 Identity = 110/221 (49.77%), Postives = 142/221 (64.25%), Query Frame = 2
Query: 50 SPLAVLFYYPNLIGYARIIAVLSSFYLADTNWKFSFMCYVLAFAGDAVDGAVARYFNQSSQFGAVLDMVTDRCSTAGLLMVLSRLYGGGAPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFIPEASVVLRAGGAVLSLRAVCYFVFLPACVCKQAVNVAQLCAAALSLALVESERSDAGSKK 712
+P V FY PNLIGY R++ L S Y+A ++K S +CY L+F D DG AR+FNQ S FGAVLDMVTDRCSTAGLL++LS LY FL+LL++ D SHW + S G HHK T+ADRN++ RL+Y YPFF +CCVGTE FY+ LY+L F P + G L + ++V LPACV K +NVAQL +AA ++A + D +KK
Sbjct: 6 NPTPVFFYVPNLIGYVRVVLSLYSLYVALDDYKTSVLCYALSFVCDYFDGFFARWFNQCSNFGAVLDMVTDRCSTAGLLVILSHLYPKYMIVFLYLLIL--DFSSHWYQMYSAKG-HHK---TVADRNLLLRLYYNVYPFFGYCCVGTEFFYILLYVLHFDPAYVI----PGTAFPLEKLAFYVCLPACVLKNIINVAQLASAAHAVA-----QDDINNKK 211
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 391.3 |
| Seed ortholog evalue | 3e-106 |
| Seed eggNOG ortholog | 2880.D8LI10 |
| Preferred name | PIS1 |
| KEGG rclass | RC00002,RC00031,RC00078,RC02795 |
| KEGG ko | ko:K00999,ko:K15893 |
| KEGG Reaction | R01388,R01802 |
| KEGG Pathway | ko00260,ko00562,ko00564,ko00630,ko01100,ko01110,ko01130,ko01200,ko04070,map00260,map00562,map00564,map00630,map01100,map01110,map01130,map01200,map04070 |
| KEGG Module | M00532 |
| GOs | GO:0003674,GO:0003824,GO:0003881,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0090407,GO:1901576 |
| EggNOG free text desc. | CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity |
| EggNOG OGs | COG0558@1,KOG3240@2759 |
| EC | 2.7.8.11 |
| COG Functional cat. | I |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | CDP-diacylglycerol---inositol 3-phosphatidyltransferase |
| Ec32 ortholog | Ec-18_001300.1 |
| Exons | 6 |
| Model size | 1787 |
| Cds size | 681 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815776.1617777-UTR-P-fluviatile_contig18:2326072..2326109 | 1622815776.1617777-UTR-P-fluviatile_contig18:2326072..2326109 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 2326073..2326109 + |
| 1693563291.8279848-UTR-P-fluviatile_contig18:2326072..2326109 | 1693563291.8279848-UTR-P-fluviatile_contig18:2326072..2326109 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 2326073..2326109 + |
| 1622815776.253646-UTR-P-fluviatile_contig18:2333037..2334106 | 1622815776.253646-UTR-P-fluviatile_contig18:2333037..2334106 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 2333038..2334106 + |
| 1693563292.0676775-UTR-P-fluviatile_contig18:2333037..2334106 | 1693563292.0676775-UTR-P-fluviatile_contig18:2333037..2334106 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 2333038..2334106 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815776.181318-CDS-P-fluviatile_contig18:2326109..2326161 | 1622815776.181318-CDS-P-fluviatile_contig18:2326109..2326161 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2326110..2326161 + |
| 1693563291.9016879-CDS-P-fluviatile_contig18:2326109..2326161 | 1693563291.9016879-CDS-P-fluviatile_contig18:2326109..2326161 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2326110..2326161 + |
| 1622815776.1909146-CDS-P-fluviatile_contig18:2327308..2327372 | 1622815776.1909146-CDS-P-fluviatile_contig18:2327308..2327372 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2327309..2327372 + |
| 1693563292.0204654-CDS-P-fluviatile_contig18:2327308..2327372 | 1693563292.0204654-CDS-P-fluviatile_contig18:2327308..2327372 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2327309..2327372 + |
| 1622815776.2009637-CDS-P-fluviatile_contig18:2328439..2328510 | 1622815776.2009637-CDS-P-fluviatile_contig18:2328439..2328510 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2328440..2328510 + |
| 1693563292.0317657-CDS-P-fluviatile_contig18:2328439..2328510 | 1693563292.0317657-CDS-P-fluviatile_contig18:2328439..2328510 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2328440..2328510 + |
| 1622815776.2142236-CDS-P-fluviatile_contig18:2330584..2330744 | 1622815776.2142236-CDS-P-fluviatile_contig18:2330584..2330744 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2330585..2330744 + |
| 1693563292.040666-CDS-P-fluviatile_contig18:2330584..2330744 | 1693563292.040666-CDS-P-fluviatile_contig18:2330584..2330744 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2330585..2330744 + |
| 1622815776.224515-CDS-P-fluviatile_contig18:2331354..2331556 | 1622815776.224515-CDS-P-fluviatile_contig18:2331354..2331556 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2331355..2331556 + |
| 1693563292.048648-CDS-P-fluviatile_contig18:2331354..2331556 | 1693563292.048648-CDS-P-fluviatile_contig18:2331354..2331556 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2331355..2331556 + |
| 1622815776.2402263-CDS-P-fluviatile_contig18:2332905..2333037 | 1622815776.2402263-CDS-P-fluviatile_contig18:2332905..2333037 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2332906..2333037 + |
| 1693563292.0595756-CDS-P-fluviatile_contig18:2332905..2333037 | 1693563292.0595756-CDS-P-fluviatile_contig18:2332905..2333037 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2332906..2333037 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3345.1 >prot_P-fluviatile_contig18.3345.1 ID=prot_P-fluviatile_contig18.3345.1|Name=mRNA_P-fluviatile_contig18.3345.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=227bp
MAGPSPLAVLFYYPNLIGYARIIAVLSSFYLADTNWKFSFMCYVLAFAGD AVDGAVARYFNQSSQFGAVLDMVTDRCSTAGLLMVLSRLYGGGAPAFLFL LLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCV GTELFYVALYLLVFIPEASVVLRAGGAVLSLRAVCYFVFLPACVCKQAVN VAQLCAAALSLALVESERSDAGSKKK* back to topmRNA from alignment at P-fluviatile_contig18:2326073..2334106+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig18.3345.1 ID=mRNA_P-fluviatile_contig18.3345.1|Name=mRNA_P-fluviatile_contig18.3345.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8034bp|location=Sequence derived from alignment at P-fluviatile_contig18:2326073..2334106+ (Porterinema fluviatile SAG_2381) GTTGTAGTGTCCGCAAGCCAGAGGGAGCGAGAGGGCGATGGCGGGCCCTT
CCCCCCTTGCGGTTCTCTTCTACTACCCAAATCTTATAGGTGTGATCGAT
CTCACCTTGAAGGAGAAGGCGTTGCAAAGCTGGATCAAAATCGCACCCGG
AATGTGTTCCGCCGTGATGCAGCTATCAAATTGTCGAGTCTGCCAATCTA
AAGATTGTGCCTTGTGGCGAGTTTCCCTTGTGCGTGTGTGAACAAGATGT
ATGAGAAGGGACAGTCCAACCCGATTTGCGTTTCAGCTCTTGCTTGCTCT
CAACTGCTATATCCGTTGCCAGCACACGTGCGTGCGAAACTGGGTCTTGC
TTTTGTTGCCCCGATTGGACGCGGACACATGGAACACACCTGCTCCTAAC
CTGGATGTGTTGCGCCCCTCGACTGTCTCGTTGCTGCAACACATGCAATG
TTGTCCAGGGCGACCACATCTCATTGGTACGTCGGCAGTGTGTTTTCCAC
ACACAGGTTGTGAAATTCGCCGCGCGTTCTCTCAGCAGCAGCAGTGCTTA
CGAATCTCAGCACCTGTGATATACTCGAGTATATCGGACATAGGGTCAAA
GTCCACCGTTGTAGTATTGATCCCTGCCGTTTACATCCGGGTACAAGGAG
TCGAAGTCCCCAGCAATTGTTGGCGTCCATCGCGAAGTTCGCCGGCCTTG
CGCTGGTTGTTGGAATGACGCATTCCCTTTTTTAGAACCAGGTGTGCGAT
TAGGCAGCTGTACAACTCCTTATGATCGACCAACATTCGCCGCAACGTGT
GCTTTTTTGAGAACGCCCGCCAAACGCTGCGGCCGCCGGCTCTTTTCCGC
ATTCGGGTTGGCCAGAGGTCGCCTTGAGTTGGTAAGGTCTACGGTTAGGC
TGAGGGTTGGGTCGACTGCTTTGCACGAACTGAAGGTGAGTTGGTGTGCA
CCTGGCTATTTGCACACACCTGGTGTCCCAAAGGGTCTACACCACTTCGA
AAGCGCCCCCCCCACTCGAGCGTCGGCCGGTGGAAACCCGGCAGATCGCT
ACGTCCAGGCTTATTACTCTGAGTGTTGGGGATCGGAGCTTTTCGGCCTA
ATGTCTTCGACGTGCGATTCTTGAGTACCCCCCCCACCCTCCCCTCCCGC
ACTCTTCGCCTGAGATCATGCAAGTAACCCGCATTTCCGCGACGAAACAC
CATGCACGTGCCTCATCCAACGTTGCACGCCCCAAGGGTACGCGCGCATC
ATCGCGGTCCTCTCGAGCTTCTATCTGGCCGACACCAACTGGAAGTTCAG
GTGTGGGACAGGACGCAGCGAGAGTGACAGCAACAGAGAGACAAGCAGAG
GCAGACCCGAACCGCTTGGGCTTGGATGACCACATGATCACTCCTGTTTT
GGCACATGGCCACAATGCGCACTTGTAGACGTCCTTGTGCTGAGAGGACG
GGGAGACGGAACTCACCCGAAGGCTGCACTCAGGCCATTGCTCCCAATAT
ATGTGCTGTTGGTTTTCTCGAGGGGGCGCAGTCTAGAATCGTTGTAAGAA
ATTATAGGAGAAAAAAGGTGGTTTGTCCACTTTGGCGTGTTTCCAAGCCA
AAAAAGAGTATCGAACGGAGCAGGGGTCTAGCGACACTGCGGGAGCAACC
CACCGACTGCTTTCAAACGGTGCCCCCCTCTCCGTTTCCAGGTGCCAGGG
CAGCCAGTTTTGGTGTTTTGGGCGTGTCGTACTTTGATTTGTATGAATGA
GCGCTGTTGCTTCCATTGGCAGGCCCTCCACGCAGTTTCCTTCGTGTCTT
CGTGTAATGTGATTGATATCGTTACCAAAATTATGTCGTTGTTGCTCATG
CGTCGTCGCAAGTCGCCATTATATGTGCAGCTGGAGCTTTTGAAGGTCGG
CCGCCGTCGCGACCGTTGTTCTCGTCATCGTCATCGTCATCGTCGTCACC
GTGTCCATTTGTTGTTGCTGACGTCTCGCCCTTGATGTGATCGCCGTCAC
TGTTTTGCCGCATTTCCTATTTCGATGCTACTTTTGTTCTCGTTTCGGTA
TTCTGCGACGCCGAAGTTCTTAACCTTAATCGTGGCTCGTGGCTCGCGAC
GCCGAAGGGCGCTTGCTACGTTCCTGGACGAAAACACAAAAAGTGCACGC
CCTGTAGTATGACTCCTCCCCCACCACAACCTCTTGCCACCCCCGCCCCG
CCCCTCACAGCCATACTCTCCGTCCTGCTTTATTGAGTTGCGAGGTGAAT
GGTTTTAGGCAGGCACGGCTAAAGTACCCCCCCCCCTGGCCCATCTTTCT
CCCCCCCTTCCCCCCCCTTCCAATCCTCCTTGCCCTCCTGCGGCACTCTT
TTATGGCCGGCGTGCAGCTTCATGTGCTATGTGCTGGCTTTCGCGGGAGA
CGCTGTGGACGGCGCCGTGGCCAGATATTTCAACCAATGTGAGAGCCTCT
GCTTCCGTGGCGGCGGGTTTGTGTGTACTCGTTTGTCGTGCACGGCGATG
AAGTGATGAATGAGACTAGATCTGGGGGGGAGAGCAATCAACAGACGTGC
ATGCCGTAGTCGTAAGACCATTGACTTCGCATTCCCACAAAAGTCGGGGC
GGAGTACACCGGGTTTGCACCAGACTAGACTCACGTCAACAGAGCGGCGG
GGGGGGTAGGAGAGGTCGACAACAAGTCAACGTTTTTCGCGGTCTTCACG
AGTCCCTCACGGGCGAAGGCTGAAAGTGACACGGCGAGTGTTGTGACTCG
GACCATAACATGATTTTCCCCCCGCATCATGCGGGCACATGCAGTGAATC
GCGCCTTGCCTTGCACATCCGCAACCCCCCCCCCCCCTCGACTACCCTTC
CTTGTCCACCTTGCTGCCCGCCCGGCGGTCTCCTCCCGTGGATACTCGTA
CAGAGGGGCGCCGTATTGCGGTGGTGGGCCGGAAGTTTCCCCCCGCATAA
CTGTGGGCGCCCCGCTCTTAAGCAGCTGGCAATCAAGAAATTGAGTCTTC
AAATTTAAAAAGAATTGAATGTGACGATAAACATACGTACTCCATTCCGA
CGTGGAACTGTGAACCCGCAAGTGAGGTATTCCACTGCGGCCATAGATAG
TACACGAACCCGTTTAAGCGATAGTGGCCGTTTACGCGATGGCGGCCAAG
AATAATAAAAAAATCCGAGGCCGGTGTGTCGTCAAGCACCCTCCACCCCC
AAACAAGAAACAATATTGCTTCAGGGAAGGTACCCCCACTTTTGTTTATC
TACACAGGGTGCCCCTCTGTGCGGGGTTGTTGCGTGCCACAAGGTTTGTC
TGCATGCACGGCAACCATGTCATTGCCCTGTGAAACATTGAACGAGCTCG
GACACAACTTACTTCCACGGCTCAGAGGAAGAGGGGTCATTCGCGAACGA
CATATGAAGAGGTCGATCGATCCTGGCGGGAAACTGCGAAGGGACACTGG
GAGGACATCAGCTTGATGCTAGGGGAAAGAGAAAGTGGCCTCTTCTCTGA
ATGGGTGGATCCGGGAGGTTGTTTTCCATATTCACGGTATCATTCGGAGC
GCCAGGCCTAACGTATCCTGATCGATAAATAGGGTTGGGGGCTGTTCAAT
TTGCTTTTGGCACACTGCAAGATGTAAAGTTTGGGTTTGTGGTTGATCAC
GGAGTCCTCCTTGCGACCGTCTTCCACCACTCTAGTCATAACAAGAGATT
GCCTTTGTTTCCATTCGTCGTATGGATGGTAAACAATAAGTGAGCGTCGT
TTATTTTGCTTTGTGTTTTTGATTCGGTCGATTGCCCTTCTTCGAGGAAA
ACAAGTACTTCGACCTGCATGACAATCTATCGTCAAAATGAAGTACAATT
TCAGCGACTCTCGCGTTGAATCCTGACCTCCCAAATAAGCAAAAGACAAA
CGAGAAATGTGCTCGGTCCGGGACAGGCGATTTGCAATGAGCCTCGACCG
AAAGAGGCGTTTCTGAAGTGCGCGCGCCTATAGCGGACACCCACGCTTGT
CATATACGGGTAGATTTTTTTTGTGCGCGAGCACTTCCGTGCCAACTGTG
TTCACCCGCACTATACCGACGAACCGCACCACAGCGGGTATCTTCCTCTA
TTTTCAAAATGAGGGGCGGAAGAAACAGACACGCGTTGAACGAAACCGCC
CGTGTTTCGTGGGATGATCGCTCTTCAAACGTGTCGCTAGCGTTCGCGGC
AAAAGAGATCAAAATTGTTCTTGCATTTTTCTGCCTTCATCTCACTTCCT
CCCCTATCGCCGCTTCCAAGTTCTCCCCGCTGGGACATGGAATAGACCGC
TATGCTCACGAACTGTATCCGGCTCTTTCGTTTTCGTATGTTTGTTTTTG
CCTTCCTCGCCTCCTTTCCTCCCTGCTCGCAGCCCCACAGTTCTGAGCTG
TGTAGGACATGGTGACGAACAGCTTTACTCACGACATGTCTGTTTTGCCT
GTTCTAGAAAAAAGTCCCTCAATCCCCCCCCCCCCAATGTGTACCTGCCT
CGCTTTTCGCAGCTTCCCAGTTCGGCGCCGTCCTCGACATGGTGACCGAC
CGCTGCTCCACAGCGGGGCTGCTGATGGTGCTATCCAGGCTGTACGGGGG
GGGGGCGCCGGCCTTTTTATTTCTGCTCCTCATGTTCATCGACCTATTCA
GCCACTGGATGCACGTGCAAAGGTGCACCCGCGCACTGAAAGAGTTTTTT
TTCAATTTTTTCACGGTCGTGGAATGGGAATGAAAGGTATATGAGCAAAA
AAGTTTGAATTTAATTCTTTTTGGCAGCACTGACCATAATCGGTGAGCTT
TCACGGCACTTCGGGCTTTGTTGGCGAAAAAAATAAAATCTCCCGCTGCC
GTGTGGAGGCTGTCGAACCCAGTTCCAAAGAGAACCTCGGAAGATTGACG
ACTGACCCGTGCGAACACGCCGGTGGTGTTGGAAAGATCGTTTGCGTGAT
CCGTGGTGCTTGACCCCGAATCCCTCGCGATTGGTGCAGCACAATATCTG
ATGCAGCCTCGTTTTCCGTTCGGAGAATTTCACTTTGAGAAGAAAAAGAA
GTGCTGCAGTTTTCCGACCGACCTCCCTCACAAAGAACGCCGCTCAATGC
CATCGGCCTGCAGGCCAGAAACGTAAGGAGCGCCCAAATGCCGGAGGTGC
CTCTGTTAGGGGTAGGAATGGTGCTCCCTGTCCAAAGGGCTGCGTGACCA
ATGGTCCAATGAACGAGGCAAGCATCAGAGCCCCCCCCCCCCCCCCCCTT
CGCGCACGCGGTCAAATCTCGCTCCTCCTCAGCACGGCCGGTCGACATCA
CAAGGCTGCCGACACCCTTGCGGACCGCAACGTGATCACGCGCCTGTTCT
ACGGCTGCTACCCGTTCTTTGCCTTCTGCTGCGTCGGGACGGAGCTGTTC
TACGTGGCGCTCTACCTTCTGGTCTTTATCCCGGAGGCGTCGGTCGTGCT
CAGGGCTGGGGGGGCGGTGTTGTCCTTGCGCGCGGTGAGTGGTTCGTGGT
TGGTCTTATCTTTGGTTGTTGTTGTTGCTGTTGTTGTTGTCGTTGGTTGT
TGTTGTTGCTGCGGTTTGTGCTACTGCTGCTGCTGCTGCTGTTGTGTTTA
GAATTGTTGCGGCCGCCGAAGGCGACCACTGTTGTCGCCTCCGTTGGTCA
TTTGTAGCCGCTGATGCCCCTTTTTCTTTGAGACGCAGCGCCTGGACGCT
GTGTTGTGCTCGCTCACCTGAAGTAACCCCACCTCTACGAACTGGCGCGG
CGGGCGTCGGAACGCAAATTACCGGTAGCCGTAGCATCCGATGACCTCTT
CCCTCGTCCATGGCCAAGAAGGGTCTCCCGGCCGTGAACCCCCCCATGCC
TCGTCGTGAGGGTGGGCAAAGCCGCCGACAGCGGCTGCTGGTGGGCTCGC
CCACCCGAAACATGAGACACGAGAGCTTCTACGGCAAGGCGTAGCCTCCC
TGACAATGGGCGGGGGCAGATGTCACGACCATCCATTGGCACCGGGAGTA
CGGCGCCAAAAACGCAGCGGGTGGCTTCGTCCTCACCGGAGCCGCGAGAG
CCCTGCCATGCGCGCGCTCGTGGCTGGGGTGGGGGCAGCCATCTCCCTTG
CTCCTTGTCGTCGTCCCGATGCCGACAGTCGTAGCATCCGCCGCCCCCCT
ACCCCCGCCCTTTGTCGAGAGGGGTCTTTCTTTCGTGAAGGCTCCGCCGG
TTCGGATTGGCGAGGTGATTCGCAGGCGGCCATCTGTGGCGTTCCTTGTC
GTTGAATCCCGGTGCCGGTAATCGTAGCATCCGCCGCCCACCTCCCCCGG
CCTCTTATCGAGAGGGGTCTTTCTGCTTTGAACGCTCTCCTGGGTTGGGG
GGGGCGACGTGATGCCCATGTTGTTTTGGTTGGAAGGTCATCCGTCTGTT
CAGCCGCCGCGCCTTCCTTTGCCGTGCCCCCCCATTCTCTTCGCGCTTGG
TGGTGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTGCTCCGTCCCGGCTT
TGTAGGGATGCGAGGTCAATGGTCTAACGACTACGGCATGCACGACTATG
AGTACACCCCCATTCTCGAACAACACGcccCCCCCTTTGAAAATATGTTG
GTATCGCCTTTGATCTTTGCTTTCTTTTTCCCACGCACGCGCCTGTTTAA
TCATCTGCATGTTTGTCAGCTTGGTCCATTTGATTTGACGCGACCTGATC
CTGAAAAATGATGCGCTGCTGACCAATCAAGTTCTGCTTCGCTCCGCTGT
CTTCCCCGTTCCGTTTTTTTTCTTCAATCGATCGTTCCCGTGTTTCTTTC
CCATCTTTCCATCTTTGTTTCACACGTGTGCAGGTGTGCTACTTCGTGTT
CCTGCCGGCGTGCGTGTGCAAGCAGGCCGTCAACGTGGCACAACTGTGCG
CGGCCGCTCTTTCCCTCGCGTTGGTCGAGTCGGAGAGGAGCGATGCCGGC
TCTAAGAAGAAGTGACGGTGAAAACGATGACGGCACATTGGAGCACAAGT
GATTGGGAAAACGACGGCGGCGCATCCTCGCAAAAATGGCAGCCGTGAGC
GACGGTGGCGTATTGACGCTGAATGCGAGGGCGGAGGGTATTGCCGGTGG
TGTGCTGTTGTGCATCCGGCCGCGGAACGACAACACATCAGAGGAGGGTT
GCGCAGGCTTCGTTTTCTCGCTCCCATCTGTAGGTGGGGGGGAGGGGCGG
GTAACAAGATAAAGGCGATACGCTGCTGTGCACCTACCCCAGACCAAATG
GAGCACGCGCTAACACAATCACATGCATGCTATCGGTCGCCCCGGTGGTC
TGTTATTAGTCGGTATCCCCGTAACCTTCTAGCAGGCAAGGTCATGGTTT
CGAATCCCAGCGTGAGCGACTTCTCGAAACGAAATTAATCTTGCGTTCTT
GCCGGTGGATAGAGACTGGTGCGTGTGTACACAGTGGGAAAGAAGGTGGC
TGAAACTCTTCTCACAGTGAAAGCTATCAGTCAGCACGCAGGAGGAAGGG
AGTGGGGGGCTCAGGGAGAGGAACATTTCGTGCGCCCACGATTCATGTGT
TCAGGCAAGTTGCCCCAGGTGGCAAGGCGCCCTTTGAACTCCGGAACAAA
TGTGATGGCAAAAATAAGAAAATGCATCTAAGTTTCAAAGCCACCTCTGC
CATTTGCTAGCAGGTCCGGCTGTGTGTCGCGTAAGGGAGCAAGTGCACCA
GGCAGTCGGGGAGGAGCTTAGAAAAGGCGTTGAAGCACCAAGCAGAGACC
TGCAAGTTCGGTACGGGCCCGGTCGCTGACAGAGCGTTAGAGGGACAAGG
CGGCGAAAAGCGGCTCCACCCTCGCTTTTTTGTTGTGCTCTTTACGGCAA
AAAAATCGGGTCATATCCTTTGCTTTCTGAGTTTTCGCCGATAGTTGAGG
ATGATGTGCACTGCTTTGCTTCAGCAGGTTTGCCACTGGCGCAAGCAGCA
GATGGAAGCAGTATTCGGCCTCGCATGCACGATTCTTTGGGTGTTGTGGC
GGGCGTTTTTCGCATCACGGTGGCCCACCTTGGC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig18:2326073..2334106+ >mRNA_P-fluviatile_contig18.3345.1 ID=mRNA_P-fluviatile_contig18.3345.1|Name=mRNA_P-fluviatile_contig18.3345.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1362bp|location=Sequence derived from alignment at P-fluviatile_contig18:2326073..2334106+ (Porterinema fluviatile SAG_2381) ATGGCGGGCCCTTCCCCCCTTGCGGTTCTCTTCTACTACCCAAATCTTAT AGATGGCGGGCCCTTCCCCCCTTGCGGTTCTCTTCTACTACCCAAATCTT ATAGGGTACGCGCGCATCATCGCGGTCCTCTCGAGCTTCTATCTGGCCGA CACCAACTGGAAGTTCAGGGTACGCGCGCATCATCGCGGTCCTCTCGAGC TTCTATCTGGCCGACACCAACTGGAAGTTCAGCTTCATGTGCTATGTGCT GGCTTTCGCGGGAGACGCTGTGGACGGCGCCGTGGCCAGATATTTCAACC AATCTTCATGTGCTATGTGCTGGCTTTCGCGGGAGACGCTGTGGACGGCG CCGTGGCCAGATATTTCAACCAATCTTCCCAGTTCGGCGCCGTCCTCGAC ATGGTGACCGACCGCTGCTCCACAGCGGGGCTGCTGATGGTGCTATCCAG GCTGTACGGGGGGGGGGCGCCGGCCTTTTTATTTCTGCTCCTCATGTTCA TCGACCTATTCAGCCACTGGATGCACGTGCAAAGCTTCCCAGTTCGGCGC CGTCCTCGACATGGTGACCGACCGCTGCTCCACAGCGGGGCTGCTGATGG TGCTATCCAGGCTGTACGGGGGGGGGGCGCCGGCCTTTTTATTTCTGCTC CTCATGTTCATCGACCTATTCAGCCACTGGATGCACGTGCAAAGCACGGC CGGTCGACATCACAAGGCTGCCGACACCCTTGCGGACCGCAACGTGATCA CGCGCCTGTTCTACGGCTGCTACCCGTTCTTTGCCTTCTGCTGCGTCGGG ACGGAGCTGTTCTACGTGGCGCTCTACCTTCTGGTCTTTATCCCGGAGGC GTCGGTCGTGCTCAGGGCTGGGGGGGCGGTGTTGTCCTTGCGCGCGCACG GCCGGTCGACATCACAAGGCTGCCGACACCCTTGCGGACCGCAACGTGAT CACGCGCCTGTTCTACGGCTGCTACCCGTTCTTTGCCTTCTGCTGCGTCG GGACGGAGCTGTTCTACGTGGCGCTCTACCTTCTGGTCTTTATCCCGGAG GCGTCGGTCGTGCTCAGGGCTGGGGGGGCGGTGTTGTCCTTGCGCGCGGT GTGCTACTTCGTGTTCCTGCCGGCGTGCGTGTGCAAGCAGGCCGTCAACG TGGCACAACTGTGCGCGGCCGCTCTTTCCCTCGCGTTGGTCGAGTCGGAG AGGAGCGATGCCGGCTCTAAGAAGAAGTGAGTGTGCTACTTCGTGTTCCT GCCGGCGTGCGTGTGCAAGCAGGCCGTCAACGTGGCACAACTGTGCGCGG CCGCTCTTTCCCTCGCGTTGGTCGAGTCGGAGAGGAGCGATGCCGGCTCT AAGAAGAAGTGA back to top
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