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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | signal peptide |
| Exons | 5 |
| Model size | 1646 |
| Cds size | 546 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815774.976969-UTR-P-fluviatile_contig18:2220745..2221734 | 1622815774.976969-UTR-P-fluviatile_contig18:2220745..2221734 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 2220746..2221734 - |
| 1693563290.5560796-UTR-P-fluviatile_contig18:2220745..2221734 | 1693563290.5560796-UTR-P-fluviatile_contig18:2220745..2221734 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 2220746..2221734 - |
| 1622815775.0433357-UTR-P-fluviatile_contig18:2225816..2225819 | 1622815775.0433357-UTR-P-fluviatile_contig18:2225816..2225819 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 2225817..2225819 - |
| 1693563290.5977228-UTR-P-fluviatile_contig18:2225816..2225819 | 1693563290.5977228-UTR-P-fluviatile_contig18:2225816..2225819 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 2225817..2225819 - |
| 1622815775.0534134-UTR-P-fluviatile_contig18:2227622..2227730 | 1622815775.0534134-UTR-P-fluviatile_contig18:2227622..2227730 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 2227623..2227730 - |
| 1693563290.6115391-UTR-P-fluviatile_contig18:2227622..2227730 | 1693563290.6115391-UTR-P-fluviatile_contig18:2227622..2227730 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig18 2227623..2227730 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815774.9904218-CDS-P-fluviatile_contig18:2221734..2221858 | 1622815774.9904218-CDS-P-fluviatile_contig18:2221734..2221858 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2221735..2221858 - |
| 1693563290.5635087-CDS-P-fluviatile_contig18:2221734..2221858 | 1693563290.5635087-CDS-P-fluviatile_contig18:2221734..2221858 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2221735..2221858 - |
| 1622815775.0044386-CDS-P-fluviatile_contig18:2223386..2223497 | 1622815775.0044386-CDS-P-fluviatile_contig18:2223386..2223497 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2223387..2223497 - |
| 1693563290.5713623-CDS-P-fluviatile_contig18:2223386..2223497 | 1693563290.5713623-CDS-P-fluviatile_contig18:2223386..2223497 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2223387..2223497 - |
| 1622815775.0161738-CDS-P-fluviatile_contig18:2224250..2224342 | 1622815775.0161738-CDS-P-fluviatile_contig18:2224250..2224342 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2224251..2224342 - |
| 1693563290.5793629-CDS-P-fluviatile_contig18:2224250..2224342 | 1693563290.5793629-CDS-P-fluviatile_contig18:2224250..2224342 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2224251..2224342 - |
| 1622815775.0290377-CDS-P-fluviatile_contig18:2225597..2225816 | 1622815775.0290377-CDS-P-fluviatile_contig18:2225597..2225816 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2225598..2225816 - |
| 1693563290.587368-CDS-P-fluviatile_contig18:2225597..2225816 | 1693563290.587368-CDS-P-fluviatile_contig18:2225597..2225816 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig18 2225598..2225816 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3335.1 >prot_P-fluviatile_contig18.3335.1 ID=prot_P-fluviatile_contig18.3335.1|Name=mRNA_P-fluviatile_contig18.3335.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=182bp
MAPHHARKTETSNRGGWLLSALALVALLCNGAAAAAPDPFRQLQTATTLD CSPETRSCTENDVCNNCIISFEAEGLTCTDYDYDKTNECQVRGVAYCCGA EGTGDPDECLVDASTLELWACLMEENGCNLSDMPCFQRESSGVSAQQSGA SRGAAAAGAAAAAATALALALTVTGGGLFSL* back to topmRNA from alignment at P-fluviatile_contig18:2220746..2227730- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig18.3335.1 ID=mRNA_P-fluviatile_contig18.3335.1|Name=mRNA_P-fluviatile_contig18.3335.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6985bp|location=Sequence derived from alignment at P-fluviatile_contig18:2220746..2227730- (Porterinema fluviatile SAG_2381) CTGACCCCTCACTCTCTACCTTGTTCGACGAACCCTCGCTAGACTCATCG
CCGTCCTTCTACCTCGGCTACCGTTCCCAAGCATCGCTGTTGTTTTCCTC
GTCTCGATGTGAGTAAATCCTTCCGCTCCGGCACGAACGATACAAGTACT
GCTGTAGGTGGTTGGGACGGTACAGGTGTGGGGAGAGATTCGTTGGCACA
AAAAACCCGAGATAGAAGGCTCCCAGCGGCGTCAATACCGACAAGCTGCT
GGACTGGCGCGTTGTCGATAAGCTTCACGGAAACCACGGGTTCTTTTTTC
GTTCGACCGCGAGAGGTGCTTGTCGATCCCTGACGGAGGGCCCTGCGCGC
TTTGTCGGGAGAGAGTGGTGACCGCGTCGTCGCATCCCCGAGCGACGTCG
CATCTCTGTTCATATTTCGACCGGACAACAATTTGTGCGCACAGCAGCAG
GGTCTAGTGGTGCGCACTCGAGAGCAGCACGCCCACCAATGATGGGCACG
GTGCCGTGTGCTGCGTTAGTGCACCAGCTTTCCCAAGCTTTGAAAGTGCG
CGCGCGCGTGATGCGTGTGAGTCGTAGGACATGGATTTTTGAATTCCCGA
CGAGACACACATCTACACACACAAATCGACCAAGGGAAAAAATACATGTG
TATTTTTTCCTCATTCCCTACTCCCTTGCCCCCCGCGCCTGCCATCATGC
TTAACGCCATTTGATCAAGTGTGGTATACAACATTCAATCTGCATCGGCT
CCCTAGTCACTAGGGAGCGTTCACGTCCCACCGCGCGTCTCTCTGTTTGT
GACATCAGAACAAGACTTGAGAAACGAAGGCGCGAGCTCCTGCTTCGGAT
CAATTATTTAAAATACTCTGGAACAAGATACGTTAAATCGAAACAATCGG
AATAATTGTTGACCGCGGTCGAACCTAGCAGTCCCCTACCACCGCCTCTG
GCTGGGACAGAGGGCTTATTCCACCAACATGGCAAGTAGAAGACTGGCCT
CACTCTGCAGCAGCCATAGCGGTTGCCGGAACGAGAGCCGGTCGATTTCC
CGCCGTTGGGACCTCTCGAAATAATCACCCGCTTTCGTCCATGCCTTCCG
AGTGTTTAGCCCGTTCTGCATGTGCACCTTTTCCTCTCACGAGGTTGCCT
TCCCCGAGTTTCTAGACGGAGGTTGTGTTTTGTGTGTTTGGTGCGCGATT
GCCACAAAGCAGGCAACGAATCCTCCCCCATCAGAAGCGGCTGCTGGCCG
TTCCCCTGTCCATTGGGTGCTCCTATGCGCGTTTGCGGGCCTCGCTGGAA
TATTGTAAACCTTCCCGTCGATCTTTTTTCACGACACGGGGGGGACGCTA
GAATGGGCTCCATGAGTACTGTCCCAGCTCACAGAATGCTTCGTCGCGAA
GACATAGCTCGTTGGAGTGGTGTATCCCACCTCTCACCCTCTCTCTCCGC
GCGAGGAACCTTGTGGAGCATTTTCGCGTCGGGGCGCGAAGCAAGCGATG
GCCATAGCCGGCATAACGTTCCCCATCAACTCTCACTGGAGCCATTGGTG
TAGACCGGCAGCCACGGCAGTGGTCACCGTTATTGTGGTCGAGAGGCCAG
CTGCGCAAATCCAACTTACCCACCACGACTGCTATTCCCTCCTATGCTCC
CCGTCTCGCTGCAACTGATACCCCTTCCCCCTCCTGCCTTAGCCCCCACT
CGTTCCCCCCACGACCCCTCTCGCTTCAAGGCACGAAGCACGAACCCCGT
TTTGGATCACTTAATCCATTTTGCCCTTCGAAAATTCTGAGAACCGCAGA
CGAAGACATCATATGTATGTATCCGATATTTTTAGACATACTTCTCTTCG
ACAACATCGATGAATTCATCAAAGTTTTCTCTTTGCCATGTCGCGCACCC
GCACACCGCAGAAGATGGCCCCGCATCACGCCCGAAAGACGGAGACATCC
AACAGGGGGGGCTGGTTGCTGTCCGCTCTCGCCCTCGTAGCGCTCCTCTG
CAACGGAGCGGCGGCGGCTGCGCCCGATCCGTTCCGCCAGCTGCAGACCG
CGACTACTTTGGATTGCTCCCCCGAGACCAGATCGTGCACTGAAAACGAC
GTATGCAACAATTGCATCATATCCTTCGAAGCCGTGAGTATGATAGCTTC
TTGGGGAGGGGGGGGGGACAAGGACACAAGCGAGAGACGCGCGCGCAATT
GGGTGTGCGCGCGCTTAGAGAGGGGGAGGGAGGGAGGGGGCATGTGGGCG
CAGGAGTAGCGGAGGAGCGGGGGTTCACGCCGATATTGCCCGTGCGTGTG
TCTTGCTCTGCTAACTTGTGCACGACGGTCTCGAACAACAGAAGAGAGCT
GCGCCAAGGCGCGCCACCTTCTGTCTCGAGATTTGCAGCTGCTACCTTGA
GAGTACCCAGGCCGGTATGGTTTTCAAACCAAGAAGGCGAGCGCGGATGA
TGCGGCACACGAGGGCGTGGGCGGGTGTGGGGATTAGAGGGTACTTCGTA
TACAGTCACTGATTCGGTCATTCGCCACGCATCCACTGCGCCCCCAGAGG
CATGAGAGACAGACGGCGCTGGCACCGCTCCCGACGATGGGGCTGCTACG
CATTCTCCTTATGGACTTCCGCACGACCCAAACGTCTGCCGTGGATGGTG
CCACCTCTCAACCCCCATGAACAATTTTTGCTCTGCTTTCCCTTTGATGC
CTCCCCCGCTGGCATGCACGCGAGTAACGAGTACGACCGCACATTGTTTG
GCTTTTTATCCACGTTAATAATATTTTCCCCTTCTGATTCGTTTTGGATA
CATCTTCCACGAGGGACTGTCGTACACTCGAGAGCAAGACCGAATGAAGC
AATCTCCACGCCCGTTATTTGTTGATGCTCTCCCCGGTCCAAATTTCCCT
CTCCAGGAGGGACTGACGTGCATTCGTCACGACTAGAGGGCCGCATGATA
CCCCGTTTTCACTTCACGCTCACCGTGCTATTTTCTTCTGATGTGTATAT
CTCGGATACAATGGTTGTGGCGTTGGTTCACCGGTTCCCGGCTACGCGGC
GATCTATTTAAGAGCGTCGCGGTTGCAAAATTAATCCCGCAACACCACTG
CATTCTTGACGTGCAGGCCAAACTTTGGTATGGCGGCGATGCTCCTGAGC
ACAGGGGCCAGAAATTTCCCCGACACGATGAACCGCTTAACCTCTAACCG
CGACGGTACACCTTGAAGGAGCACGCAGTACGACTATGCGCCCCCCAAAA
CATCCTCTTTTTACCGGTAATCAAATGGCGTTAACAGTGGGAATACGAAA
ATATTTCCAAGTATGCTTTTGTGTTTAAACTATAATGACAATTTCTCCTT
TGTGTCTTTTGTTGTTTGATCTTGGATTCATCCCGCAGGAGGGATTGACG
TGCACGGATTACGATTACGACAAGACGAATGAGTGCCAGGTCCGAGGCGT
GGCCTACTGCTGCGGGGCGGAGGGCACCGGGTGAGTCGATTAGAGTCGAG
TTGGGTGGAATTGTGTCAAGTTGAGTCGAGTCGAGTCGATTGTATACGCG
TTGACTCGGGTCGGGTGGAATTGTGTCAAGTAGAGTCGAGTCGAGCCGAG
TCGATTGGATTTAATTGGCTCGGAAGTCTTACGATTTTTAACTCTGCTGC
CGGCAGCTTTTCGACAACGATTTGTGCGGCACACAACTTCTTACTTTTCC
TGGGGCTCACGCTTGCCCACTAGTGGAGATAAAACATATGCGCTTTTTGT
AGAACATCTTGAAAGCGAATATCACGAAACACTCGTCTCCGAAGCATCCT
GAGGGAAAGTCGCGACAGGAATGGATTCTACCGTCGGCGTAGCTTCGAGC
CATGAAATGAGCCTCTGCTGATAGGCTGGCGAGGAGGGCCAATCCTTCTG
TACCCAGGTTTCATTGATAATTTGGCGGTCCACAAGCGCCAGCAATTGGC
GGTATCCCGAGCTGTGCCCACGCCCAACCACCATAACCAAGGACACAGCC
ACAGAAAAAGCAATGGTTGAAAGAGCAGCGAACGGGATAGAAAAGCACAA
CGGTGTAAAGGAAGCAACCGAAACAAGCAACAGAAAAACGTTCGTGTATG
GGAACAAATGAGTGGAAAAACGACGGTGTTGAGGGAGTACATGTGAGACA
AAAGACGCCGGCGCGGAATCGTGCTTGCTACTGCTGTCTTCTCCCCCCTC
CTCACCTCCCCCCTTCGCTCGCTCGGAAAACAGCGACCCGGATGAGTGCC
TCGTGGACGCCTCCACGCTGGAATTGTGGGCTTGCCTGATGGAAGAGAAC
GGCTGCAACCTGTCCGATATGCCGTGCTTCCAACGTGAGTCGTCGTTTTG
ATTCCAACGTTTTATATTCTCGCTCCAACATTCATATTTTCGCTGTCAGC
GAGGCACCTTGCCGTTTCCAACTTGAGATATACTCCGGAGTAATTTTGCG
TCTAGCTTGAGCTTCAGTCTTTCGGCGCATACTCGGAAGCTGCTCCTGGA
CTTTGGCCATCCACCGCACGCAGGATCTCCCTCGTCCTTGTCGAAGGGTA
TTCCCGCTGCGCCCTCGATGGGAGGATGCGTCGAATGCCAAACTTTAATT
CGGCCGGAATTGAATCGAGTTTGTGCGAGGTTGGACGCCTCTCCTGAACT
GCCTACCTCAATCCCGCAAGATTTGAACGCTTTTGCGCGAGTGCCCTCGA
AATCGTGAAACCTCAAGACATGTCTCTTTTGTGCCCCTCCCCTCCCCTCC
CCTCCCCTCCCTTTCCCCCCGACATGCACGCTGTGGGGCCCCGGTGTGTC
GCGAGCAAGCAGAGGACTTCAAGTGAGTGACTGTAGTCCACCCGTAATGT
GTATGCCCATGTGTAGTCCCCCCCGTAACCAGGCAGCCGTGGTGCACACG
GTTTCCATATTGGTGAAGCACGGGGGGAGTAAACGACGCTCTGTGATGGG
TATAATCGCTTGAAACAGAGACACCATTGCCAATATTGCCTTGTGATTGT
ACGACGGCGGTGGGGTTTGATCACATCATTCCCCTTCTTGCTTCTCAGTA
ATTCACAAGTATTTTCAGGGCAAGTCTTTCCCTCCAAGTACACCCTCCAA
GTACAGGATTCCACAGTGGCATCACCTCCCGCGGGTAGCGTGACCACTCC
TTTCTTTCTTCGAAGTTTCCAGTAAACCTCCTCGATGACGGGATGCTTCC
CACCATATCCCATGCTGCATGAGTGCCGAGAATGTTGTGTATTCGTGCGC
ACGTGCCAAAGTTGCAAGCCGCGAGACGATGCCCCCACCCGTCTTCGCTT
GTTGACTGTTCGTTTCCATCTGAGTGTTTTTCTAATGCTGTACGTGGACA
GACTGGCACCTGATTTGTTCGCGTGTGGATTGCTTCAACTGCTTGCCTCG
GTGTAGTTCGAAGGGCTTCACCCCGCTCGTTGCAGCACCTGCGGTGTGGA
ATCAGCAGTGGGTACGGGGTAATCGGCAACAGATTGGAGAAACCGGAACT
GAATCTACAGAAAATCGACCGGCCGCCTCGCTTGTCGCACGACCAGACCA
CAGCACACAGAAACGCTCTAGAATTTGCCTGTGCGTACACTCCAAATGTT
TCCAAGCTGACAAGCTGATCGGTGTTCCTCTTGTGTACCACGGACGCGAA
GGTACGAGAAACCCTCCCTCTCGAAAAGGGATGGTTCAAATCTGCACTTA
CTCGTTAATGCCACCTCCTCCCCCCCCTTCCCTCTCCCCCGAAAGAAAGT
GCACGTCACCCCCGCCCCCCCACATTCTCGGACAAACACGCAACCCCATG
TGCGGGCACAAACACGTAACTCCCGCTCCCCCCGCGCGCGCTCATGTTTC
CTTTGTTCTTCGATGCCTGCAGTGGAGTCTCGGCCCAGCAATCCGGGGCC
TCTCGAGGTGCCGCTGCGGCAGGAGCGGCAGCGGCGGCGGCGACCGCTCT
CGCGCTTGCGCTCACCGTTACCGGCGGCGGCCTCTTTAGTTTGTGAATTC
TGTGTTTGGTCAGGGCGGGGAAGTAGCAACGCTGATGTTGGGTACGGTCC
ATCCTTGGAGAGCAGTTTGGTGCTTGAGAGAGTGAGAAACAGTCCGGTGA
TCAGCCCGATGTGTGTTTGATTATTCCTAACGATGTGCGTCGTGTTTGAT
GAGCCCTGCATGTGCGGAGTTGCTGAAAGATGGTGAATGTGTGTTCTGCT
AACTGTAATATGGTGTAAGATTTATCGCGCCCGCCGTGCACGAGAAGTCG
ATGAAGCGAGTTTCGCGTTCCGCGTGTGGCTTTGGACGCGTTTTATCTTT
CGGGGAAGCAGCGAATGTCGCCCTCCGCCCCACCTCATCCCGCACGGGGG
CAGGGCTTCAGCCGCTCCCGTCGCCCCCTCTTGGTCGATGTTGATACGCT
TCAGGCAGCAGCAAACCGCAACAGCAAGCAGCACGGGGTTTGGCGGACAT
TCGTTGCTTGAGGCCTGCCGAGCTGTTGGAGGCAGCCAGCCAAGCCGGTT
CTAATTGCCTTTGCCGGCGGCTTCGTGTTCGCGAAGGCATCACAAGTAGA
TGACGTGTTCGACGTTTGAATTGTTTTTCGGTGAAGGCATGGAAATTAGA
ACCGGTTCAGTTGTCGAGCCACCTACGCAAGTTTCTAACTGCTGCCGTTG
TCGCTGTCGCTGACGCTGCCGTTGTTTCATGCCATCGTTGAATTGGTCTT
TGCTGTTTATTGCTGTTTTCTTTGTTCTTCGTTGACGAGGTCCCATTCTT
GTACTGTTGTAGGCGCCCGACATTTCTCTTGGGGATTTCGTTGAGCCAGA
ATGCCCTCGCGACTTTCGAAGACATGTCTGCCCTCAGTTTGTAGGCTCTC
CATGCTTGATATCACCAAATGAGTGCAGGCGGGAAGGCGTGGCAAACGAG
GCGGAGTTTATGTATACTCCCGAACAATCGCGAACGCTTTTCGCCCAACG
GGTGCAGAACTGCCTCGACTTTTTGCCAACCGACC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig18:2220746..2227730- >mRNA_P-fluviatile_contig18.3335.1 ID=mRNA_P-fluviatile_contig18.3335.1|Name=mRNA_P-fluviatile_contig18.3335.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1092bp|location=Sequence derived from alignment at P-fluviatile_contig18:2220746..2227730- (Porterinema fluviatile SAG_2381) ATGGCCCCGCATCACGCCCGAAAGACGGAGACATCCAACAGGGGGGGCTG GTTGCTGTCCGCTCTCGCCCTCGTAGCGCTCCTCTGCAACGGAGCGGCGG CGGCTGCGCCCGATCCGTTCCGCCAGCTGCAGACCGCGACTACTTTGGAT TGCTCCCCCGAGACCAGATCGTGCACTGAAAACGACGTATGCAACAATTG CATCATATCCTTCGAAGCCATGGCCCCGCATCACGCCCGAAAGACGGAGA CATCCAACAGGGGGGGCTGGTTGCTGTCCGCTCTCGCCCTCGTAGCGCTC CTCTGCAACGGAGCGGCGGCGGCTGCGCCCGATCCGTTCCGCCAGCTGCA GACCGCGACTACTTTGGATTGCTCCCCCGAGACCAGATCGTGCACTGAAA ACGACGTATGCAACAATTGCATCATATCCTTCGAAGCCGAGGGATTGACG TGCACGGATTACGATTACGACAAGACGAATGAGTGCCAGGTCCGAGGCGT GGCCTACTGCTGCGGGGCGGAGGGCACCGGGAGGGATTGACGTGCACGGA TTACGATTACGACAAGACGAATGAGTGCCAGGTCCGAGGCGTGGCCTACT GCTGCGGGGCGGAGGGCACCGGCGACCCGGATGAGTGCCTCGTGGACGCC TCCACGCTGGAATTGTGGGCTTGCCTGATGGAAGAGAACGGCTGCAACCT GTCCGATATGCCGTGCTTCCAACGTGAGTCGTCCGACCCGGATGAGTGCC TCGTGGACGCCTCCACGCTGGAATTGTGGGCTTGCCTGATGGAAGAGAAC GGCTGCAACCTGTCCGATATGCCGTGCTTCCAACGTGAGTCGTCTGGAGT CTCGGCCCAGCAATCCGGGGCCTCTCGAGGTGCCGCTGCGGCAGGAGCGG CAGCGGCGGCGGCGACCGCTCTCGCGCTTGCGCTCACCGTTACCGGCGGC GGCCTCTTTAGTTTGTGATGGAGTCTCGGCCCAGCAATCCGGGGCCTCTC GAGGTGCCGCTGCGGCAGGAGCGGCAGCGGCGGCGGCGACCGCTCTCGCG CTTGCGCTCACCGTTACCGGCGGCGGCCTCTTTAGTTTGTGA back to top
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