mRNA_P-fluviatile_contig18.3285.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig18.3285.1
Unique NamemRNA_P-fluviatile_contig18.3285.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig18.3285.1 vs. uniprot
Match: D8LJZ0_ECTSI (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ0_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 2.780e-118
Identity = 172/192 (89.58%), Postives = 183/192 (95.31%), Query Frame = 1 
Query:    1 MGNAKSMSLGPEAHAIITKAVSQLPPPPAIETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGTTGHTEALQVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDAGTQYRSGIYYTTPEQKEIALASKAEEQAKYDKPIVTEIKEATKFYRAEEYHQKYLEKGGQCSLKGDTTNIRCYG 576
            MGNAKSMSLGPEA AI+TKAVS +P P  +ETGIFAAGCFW VELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSG+TGHTEAL+VKFDPRVVKYNELLTVLWD+IDPTTLNRQGND+GTQYRSGIYYT+ EQKEIALASKA EQAK DKPIVTEIKEAT+FYRAE+YHQKYLEKGGQCSLKGDT+NIRCYG
Sbjct:    1 MGNAKSMSLGPEAAAIVTKAVSPMPTPAIVETGIFAAGCFWSVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGSTGHTEALRVKFDPRVVKYNELLTVLWDKIDPTTLNRQGNDSGTQYRSGIYYTSAEQKEIALASKAAEQAKLDKPIVTEIKEATEFYRAEDYHQKYLEKGGQCSLKGDTSNIRCYG 192
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BLAST of mRNA_P-fluviatile_contig18.3285.1 vs. uniprot
Match: A0A835YZF7_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF7_9STRA)

HSP 1 Score: 270 bits (689), Expect = 4.670e-84
Identity = 127/192 (66.15%), Postives = 152/192 (79.17%), Query Frame = 1 
Query:    1 MGNAKSMSLGPEAHAIITKAVSQLPPPPAIETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGTTGHTEALQVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDAGTQYRSGIYYTTPEQKEIALASKAEEQAKYDKPIVTEIKEATKFYRAEEYHQKYLEKGGQCSLKGDTTNIRCYG 576
            MGN+ + + G +A +I+TK V     P   ET  FAAGCFW +++++ RVPG+ ET VGYTDGHK +PTY+EVCSG+TGHTEALQ+K+DPR+V Y+ELLTVL+DR+DPTTLNRQG+D GTQYRSGIYY   +QKE AL +K E Q  Y +PIV EIK AT FY AE YHQKYLEKGGQCS KGDTT IRCYG
Sbjct:    2 MGNSPTKAFGGQAASIVTKPVPANMDPAGTETATFAAGCFWSIQISFDRVPGITETVVGYTDGHKANPTYEEVCSGSTGHTEALQIKYDPRIVSYHELLTVLYDRMDPTTLNRQGHDIGTQYRSGIYYHNDKQKEEALKAKEEAQKHYKEPIVVEIKPATAFYPAEHYHQKYLEKGGQCSRKGDTTAIRCYG 193
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BLAST of mRNA_P-fluviatile_contig18.3285.1 vs. uniprot
Match: A0A7S2V8A8_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8A8_9STRA)

HSP 1 Score: 256 bits (654), Expect = 6.240e-79
Identity = 122/185 (65.95%), Postives = 144/185 (77.84%), Query Frame = 1 
Query:   22 SLGPEAHAIITKAVSQLPPPPAIETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGTTGHTEALQVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDAGTQYRSGIYYTTPEQKEIALASKAEEQAKYDKPIVTEIKEATKFYRAEEYHQKYLEKGGQCSLKGDTTNIRCYG 576
            + GP A  IITK VS LP     ET  FAAGCFWGVEL++QRVPGV+ T+VGYT G K +PTY+EVC GTTGH EA+Q+ FDP +V Y+ELLTVLWDR+DPT +NRQGND GTQYRSGIYY + +QK  A  S A  Q+  DKP+ TE+  A+KF+ AE+YHQ+YLEKGGQCSLKGD T IRCYG
Sbjct:    3 TFGPSATQIITKDVSSLPTNDTTETATFAAGCFWGVELSFQRVPGVISTQVGYTAGEKDNPTYEEVCRGTTGHAEAVQLTFDPSIVSYDELLTVLWDRMDPTQVNRQGNDRGTQYRSGIYYHSEDQKIKAEESIATLQSTLDKPVATEVLPASKFWPAEDYHQQYLEKGGQCSLKGDVTGIRCYG 187
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BLAST of mRNA_P-fluviatile_contig18.3285.1 vs. uniprot
Match: A0A7S3HR50_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HR50_9STRA)

HSP 1 Score: 237 bits (604), Expect = 3.110e-71
Identity = 116/196 (59.18%), Postives = 142/196 (72.45%), Query Frame = 1 
Query:    1 MGNAKSMSLGPEAHAIITKAVSQLPPPPAI----ETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGTTGHTEALQVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDAGTQYRSGIYYTTPEQKEIALASKAEEQAKYDKPIVTEIKEATKFYRAEEYHQKYLEKGGQCSLKGDTTNIRCYG 576
            MGN  S   G  + AI+T+AV+     P +    +    A GCFWG+ELA+QRVPGV++TEVGYT G KK+PTY+EVCSGTTGHTEA+Q+ +DP  V Y++LLTV WD IDPTTLNRQG DAGTQYRSGIYY   +Q ++A  S  ++Q K    IVTE+  AT +Y AE+YHQ+YL KGGQCS  GD T IRCYG
Sbjct:   16 MGNGPSKVFGESSAAIVTRAVA-----PNVAGKKDVATLAGGCFWGIELAFQRVPGVVKTEVGYTQGIKKNPTYEEVCSGTTGHTEAVQITYDPAAVSYDDLLTVFWDLIDPTTLNRQGGDAGTQYRSGIYYHDEDQHQVAERSVEKQQQKLSDKIVTEVLPATTWYPAEDYHQQYLSKGGQCSRTGDLTPIRCYG 206
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BLAST of mRNA_P-fluviatile_contig18.3285.1 vs. uniprot
Match: A0A7S3UAA2_9CHLO (Peptidylprolyl isomerase n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UAA2_9CHLO)

HSP 1 Score: 228 bits (581), Expect = 3.810e-66
Identity = 110/184 (59.78%), Postives = 138/184 (75.00%), Query Frame = 1 
Query:   31 PEAHAIITKAVSQLPPPPAIETGI--FAAGCFWGVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGTTGHTEALQVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDAGTQYRSGIYYTTPEQKEIALASKAEEQAKYDKPIVTEIKEATKFYRAEEYHQKYLEKGGQCSLKGDTTNIRCYG 576
            P A   +T  V  L   PA   G+  F  GCFWG+ELAYQR+PGVL T VGY +G K+DPTYQEVCSG TGH EA+QV ++P+ V Y +LL + WDR+DPTTLNRQGND GTQYR+GIY  TPEQ+EIA  S  +EQAK++KPIVTE+++ + +Y AE+YHQ+YL+KGGQ + K  +  IRCYG
Sbjct:  147 PLAGMALTFEVELLDLVPASSLGLATFGGGCFWGLELAYQRLPGVLSTSVGYANGTKEDPTYQEVCSGETGHAEAVQVTYNPKAVGYEQLLKLFWDRVDPTTLNRQGNDVGTQYRTGIYVHTPEQREIAHRSLKDEQAKHEKPIVTEVEDLSVYYPAEDYHQQYLQKGGQSAEKECSDPIRCYG 330
[Close]
BLAST of mRNA_P-fluviatile_contig18.3285.1 vs. uniprot
Match: A0A067C172_SAPPC (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C172_SAPPC)

HSP 1 Score: 221 bits (563), Expect = 2.160e-65
Identity = 103/158 (65.19%), Postives = 122/158 (77.22%), Query Frame = 1 
Query:  103 FAAGCFWGVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGTTGHTEALQVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDAGTQYRSGIYYTTPEQKEIALASKAEEQAKYDKPIVTEIKEATKFYRAEEYHQKYLEKGGQCSLKGDTTNIRCYG 576
            FAAGCFW VEL +QR+PGVLET VGYT+G K +PTY EVC+G TGH EA+++KFDP VV Y+ LL   W   DPTTLN+Q ND GTQYRSGIYY +  QK +ALASKA  Q ++ +PIVTE+  A  FY AE+YHQ+YLEKGGQC+ KG T  IRCYG
Sbjct:   34 FAAGCFWSVELNFQRIPGVLETHVGYTNGPKANPTYTEVCTGKTGHAEAVRIKFDPAVVSYDALLDKFWSIHDPTTLNQQKNDVGTQYRSGIYYHSDAQKSLALASKASAQPRFRRPIVTEVVAAETFYVAEDYHQRYLEKGGQCARKGSTDAIRCYG 191
[Close]
BLAST of mRNA_P-fluviatile_contig18.3285.1 vs. uniprot
Match: A0A8J4PPY2_9MYCE (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PPY2_9MYCE)

HSP 1 Score: 219 bits (559), Expect = 3.570e-65
Identity = 105/163 (64.42%), Postives = 122/163 (74.85%), Query Frame = 1 
Query:   88 IETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGTTGHTEALQVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDAGTQYRSGIYYTTPEQKEIALASKAEEQAKYDKPIVTEIKEATKFYRAEEYHQKYLEKGGQCSLKGDTTNIRCYG 576
            IE   FAAGCFW VEL +QRV GVL T VGYT+G   +PTY++VCSGTTGH EA+++ +DP  V Y  LL + W + DPTTLNRQGND+GTQYRSGIYY   +QK  A+ASK +EQ K+  PIVTEI  A  FY AE+YHQKYLEKGGQCS KG    IRCYG
Sbjct:    3 IEKATFAAGCFWSVELFFQRVTGVLGTRVGYTNGQVLNPTYRQVCSGTTGHAEAVELDYDPSQVSYTHLLDLFWSKHDPTTLNRQGNDSGTQYRSGIYYHNDQQKLEAIASKEKEQTKHKNPIVTEIAPAGVFYVAEDYHQKYLEKGGQCSSKGCNDKIRCYG 165
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BLAST of mRNA_P-fluviatile_contig18.3285.1 vs. uniprot
Match: A0A4D9CT60_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT60_9STRA)

HSP 1 Score: 220 bits (560), Expect = 8.030e-65
Identity = 103/162 (63.58%), Postives = 122/162 (75.31%), Query Frame = 1 
Query:   91 ETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGTTGHTEALQVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDAGTQYRSGIYYTTPEQKEIALASKAEEQAKYDKPIVTEIKEATKFYRAEEYHQKYLEKGGQCSLKGDTTNIRCYG 576
            E   FAAGCFW VEL++QRVPGV  T VGYT G    P+Y+EVC+G TGH EA+++KFDP +V Y ELLT+LWDR DPT  +RQGND GTQYRS I+Y +PEQK  A A+  EEQ +   PIVT++  AT FY AE YHQ+YLEKGGQC+ KGD T IRCYG
Sbjct:   39 EVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYEEVCTGRTGHAEAVEIKFDPSIVTYPELLTILWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKLQAEAAIKEEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG 200
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BLAST of mRNA_P-fluviatile_contig18.3285.1 vs. uniprot
Match: A0A1R1XCD5_9FUNG (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XCD5_9FUNG)

HSP 1 Score: 219 bits (557), Expect = 1.080e-64
Identity = 104/181 (57.46%), Postives = 133/181 (73.48%), Query Frame = 1 
Query:   34 EAHAIITKAVSQLPPPPAIETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGTTGHTEALQVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDAGTQYRSGIYYTTPEQKEIALASKAEEQAKYDKPIVTEIKEATKFYRAEEYHQKYLEKGGQCSLKGDTTNIRCYG 576
            E   IITK+ S     P  E   FAAGCFW VEL +QR+ GVL+T+VGY+ G   +PTY++VCSG+TGH E++ +++DP V+ YN+LL   W++ DPTT NRQG D GTQYRS I+Y +PEQK+ A+ S   EQ KY   IVT+I +A++FY AEEYHQKYLEKGGQC+LKG+   IRCYG
Sbjct:    2 EMATIITKSASA----PNSEFAEFAAGCFWSVELMFQRLHGVLQTQVGYSGGSIPNPTYKQVCSGSTGHAESVLLEYDPAVISYNQLLNAFWEKHDPTTENRQGGDIGTQYRSAIFYHSPEQKDAAIKSLEAEQVKYKSKIVTQIVQASQFYPAEEYHQKYLEKGGQCALKGNKDRIRCYG 178
[Close]
BLAST of mRNA_P-fluviatile_contig18.3285.1 vs. uniprot
Match: A0A1R0GMR3_9FUNG (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GMR3_9FUNG)

HSP 1 Score: 219 bits (557), Expect = 1.080e-64
Identity = 102/165 (61.82%), Postives = 125/165 (75.76%), Query Frame = 1 
Query:   82 PAIETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGTTGHTEALQVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDAGTQYRSGIYYTTPEQKEIALASKAEEQAKYDKPIVTEIKEATKFYRAEEYHQKYLEKGGQCSLKGDTTNIRCYG 576
            P  +   FAAGCFW VELA+QRV GVL+ +VGY+ G   DPTY +VC G TGH E++ ++FDP VV YN+LL V W + DPTT N+QGND GTQYRS I+Y +PEQKE A+ S  +EQ KY+  IVT+I EA  FY AEEYHQKYLEKGGQC++KG+  +IRCYG
Sbjct:   14 PGSQFAEFAAGCFWSVELAFQRVHGVLQAQVGYSGGSTVDPTYNQVCRGNTGHAESVLLEFDPSVVSYNQLLDVFWKKHDPTTPNKQGNDVGTQYRSVIFYHSPEQKEQAIKSMEKEQKKYNSKIVTQIVEAGPFYPAEEYHQKYLEKGGQCAMKGNNDHIRCYG 178
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJZ0_ECTSI2.780e-11889.58Peptide-methionine (S)-S-oxide reductase n=1 Tax=E... [more]
A0A835YZF7_9STRA4.670e-8466.15Peptide-methionine (S)-S-oxide reductase n=1 Tax=T... [more]
A0A7S2V8A8_9STRA6.240e-7965.95Peptide-methionine (S)-S-oxide reductase n=2 Tax=F... [more]
A0A7S3HR50_9STRA3.110e-7159.18Peptide-methionine (S)-S-oxide reductase n=1 Tax=S... [more]
A0A7S3UAA2_9CHLO3.810e-6659.78Peptidylprolyl isomerase n=1 Tax=Picocystis salina... [more]
A0A067C172_SAPPC2.160e-6565.19Peptide-methionine (S)-S-oxide reductase n=2 Tax=S... [more]
A0A8J4PPY2_9MYCE3.570e-6564.42Peptide-methionine (S)-S-oxide reductase n=1 Tax=P... [more]
A0A4D9CT60_9STRA8.030e-6563.58Peptide-methionine (S)-S-oxide reductase n=1 Tax=N... [more]
A0A1R1XCD5_9FUNG1.080e-6457.46Peptide-methionine (S)-S-oxide reductase n=2 Tax=S... [more]
A0A1R0GMR3_9FUNG1.080e-6461.82Peptide-methionine (S)-S-oxide reductase n=1 Tax=S... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig18contigP-fluviatile_contig18:1758399..1764233 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score221.5
Seed ortholog evalue3.5e-55
Seed eggNOG ortholog112098.XP_008611073.1
Preferred nameMSRA4
KEGG koko:K02214,ko:K07304,ko:K14442,ko:K16914
KEGG Pathwayko03018,ko04110,ko04111,ko04113,map03018,map04110,map04111,map04113
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006464,GO:0006807,GO:0006950,GO:0006970,GO:0006979,GO:0008113,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009735,GO:0009941,GO:0009987,GO:0010033,GO:0016491,GO:0016667,GO:0016671,GO:0019538,GO:0031967,GO:0031975,GO:0033554,GO:0033744,GO:0034599,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071704,GO:0080167,GO:1901564
EggNOG free text desc.peptide-methionine (S)-S-oxide reductase activity
EggNOG OGsCOG0225@1,KOG1635@2759
EC1.14.11.27,1.8.4.11,2.7.11.1,3.6.4.13
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03009,ko03019,ko03032,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeptide methionine sulfoxide reductase
Ec32 orthologEc-06_007510.1
Exons6
Model size1778
Cds size579
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815770.4464118-UTR-P-fluviatile_contig18:1758398..17595971622815770.4464118-UTR-P-fluviatile_contig18:1758398..1759597Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1758399..1759597 -
1693563280.4662964-UTR-P-fluviatile_contig18:1758398..17595971693563280.4662964-UTR-P-fluviatile_contig18:1758398..1759597Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1758399..1759597 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815770.4587147-CDS-P-fluviatile_contig18:1759597..17596631622815770.4587147-CDS-P-fluviatile_contig18:1759597..1759663Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1759598..1759663 -
1693563280.4794567-CDS-P-fluviatile_contig18:1759597..17596631693563280.4794567-CDS-P-fluviatile_contig18:1759597..1759663Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1759598..1759663 -
1622815770.4689617-CDS-P-fluviatile_contig18:1760347..17604111622815770.4689617-CDS-P-fluviatile_contig18:1760347..1760411Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1760348..1760411 -
1693563280.489127-CDS-P-fluviatile_contig18:1760347..17604111693563280.489127-CDS-P-fluviatile_contig18:1760347..1760411Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1760348..1760411 -
1622815770.4812512-CDS-P-fluviatile_contig18:1761302..17613771622815770.4812512-CDS-P-fluviatile_contig18:1761302..1761377Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1761303..1761377 -
1693563280.4988604-CDS-P-fluviatile_contig18:1761302..17613771693563280.4988604-CDS-P-fluviatile_contig18:1761302..1761377Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1761303..1761377 -
1622815770.4932723-CDS-P-fluviatile_contig18:1761919..17620161622815770.4932723-CDS-P-fluviatile_contig18:1761919..1762016Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1761920..1762016 -
1693563280.5081725-CDS-P-fluviatile_contig18:1761919..17620161693563280.5081725-CDS-P-fluviatile_contig18:1761919..1762016Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1761920..1762016 -
1622815770.5076835-CDS-P-fluviatile_contig18:1762925..17630901622815770.5076835-CDS-P-fluviatile_contig18:1762925..1763090Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1762926..1763090 -
1693563280.517247-CDS-P-fluviatile_contig18:1762925..17630901693563280.517247-CDS-P-fluviatile_contig18:1762925..1763090Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1762926..1763090 -
1622815770.518979-CDS-P-fluviatile_contig18:1764121..17642331622815770.518979-CDS-P-fluviatile_contig18:1764121..1764233Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1764122..1764233 -
1693563280.526173-CDS-P-fluviatile_contig18:1764121..17642331693563280.526173-CDS-P-fluviatile_contig18:1764121..1764233Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1764122..1764233 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig18.3285.1prot_P-fluviatile_contig18.3285.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig18 1759598..1764233 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig18.3285.1

>prot_P-fluviatile_contig18.3285.1 ID=prot_P-fluviatile_contig18.3285.1|Name=mRNA_P-fluviatile_contig18.3285.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=193bp
MGNAKSMSLGPEAHAIITKAVSQLPPPPAIETGIFAAGCFWGVELAYQRV
PGVLETEVGYTDGHKKDPTYQEVCSGTTGHTEALQVKFDPRVVKYNELLT
VLWDRIDPTTLNRQGNDAGTQYRSGIYYTTPEQKEIALASKAEEQAKYDK
PIVTEIKEATKFYRAEEYHQKYLEKGGQCSLKGDTTNIRCYG*
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mRNA from alignment at P-fluviatile_contig18:1758399..1764233-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig18.3285.1 ID=mRNA_P-fluviatile_contig18.3285.1|Name=mRNA_P-fluviatile_contig18.3285.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5835bp|location=Sequence derived from alignment at P-fluviatile_contig18:1758399..1764233- (Porterinema fluviatile SAG_2381)
ATGGGAAACGCCAAATCAATGTCGCTCGGACCAGAAGCACACGCTATCAT
CACGAAGGCCGTTTCACAGCTGCCTCCGCCTCCAGCAATCGAAACGGGGA
TTTTCGCGGCAGGTAACCATGGAATTTTGCAGGGATCTGTACACCTCCTC
CGACGAGCTGACTCCACGTGTTTATGAACGTTGCCGCGAGCGAGCTCACG
ACCATGCTGTAGACTACCTGCACCCGAGAGTCGCATCGATTTCAGGCTCC
ACCTTCAGATTTGGCGATGCCCCGAGCAGTGGAGTGTGCCAAATGTTCCC
TTGTGAGAGATATGAACCGCAGCGGTAGATGCAGTCCCTCCGCACGTCAC
CCTTCCTCAACCAACACTCCCTCGTTCAAGAAAGGACAGATATTTTTGCT
CTTCAGACGGCCAACGGAGTCTTTTCTGCGCTTACTGCGGATTAGGAAAT
GTCCCCGCCGTCGTTTGCGAGCTTCCTGACGCAATTTCTCATGAGCGATC
GATGCGCGAAGTCTCCTGATTTTCCATCACCTGTATAGTCCTATATGGTG
CTGACTCATGCGCTGGAAATCAACTGGTACGTTGAGTCAAGCGCAGCGGC
AATCCTTGTGGGACGGCCGCCTCTGCTAGCGCACACCACTGCTGTTTTAG
AACGTTTTGCCTGACATCAATGTCGCACTTAGACTGCAGTCATTCTTACG
AGAAATTCAAAAGCATCGAACAGGGTTGTACAACTAGATAGGGAGCTGAC
TGCTGTCCCTGCTGGAAACGTCGCGTGCTTAGTCTACATTCGGAAGGCAT
TTCAACCACTAGGTCACACGAGACGACGACAGCTGTTTCTGCAATTCTGA
CCCAATCGACCTCAAACCGGTCGTTTCCTAGTGGCGTTTATGATATTGAT
CTTCTCGCGTGTTTTTTTTTTTCCGAACAGAGGCAACGAGTTTTTAAGCT
ATTCGGCGGTTGGAGCGAGTCTCTACACGATCCTCTTTACGACGGTGCTC
GCAGCTATCTCCCCCTTGTCTTGCACCCCACGGCGATCGTCAAGCATCCA
ACTTCGCAGACCCTCTGGTCTCCCTCAGGCTTTGCAAATTTGATCGACTG
GCTTCGTTCGCTTCGCACTCACGCCCGCCTCGCCCGCTGGCAGGCTGCTT
CTGGGGCGTGGAGCTCGCCTACCAGCGCGTCCCGGGCGTGCTGGAGACAG
AGGTCGGCTACACCGACGGCCACAAGAAGGACCCGACCTATCAGGAGGTG
TGCTCCGGAACGACGGGCCACACAGAGGCTCTGCAAGTCAAGTTCGACCC
GCGCGTCGGTGAGAGCCAGAAGGAAAGCATGATGTGACTGCTTATCCTGA
TTCTCTCGTTCCTCATTACTTGGTCTGTCCGTCGCTGGACGGTTTTGTCC
GACACACTCACTGCCGCCACTGCTTCTGCCGCGATGGTTGTGGTGGGGCC
ATTTGGCCGTAGTTTTGATTGGCTGGACGATGTTTGCGAGGGAAGGGCCG
CGGGGGGGGGGCAAGGCTGCCGGAAAAATTCTCTGTTTTTCGGAGTTCTC
CTTACCTTGACGATGCCAGAGAGTGCACGCAGGCTGCGCACAGGGCCTGT
TGTACCGAACAGAAACCCCATCGGGCTGTACCTGTGGACTCGTACGGGCG
CGAACTTGGTTCCGTGAGTTGGAGGCGAGAGGACGCGTGAGGAAGGGAGC
TAGATCCGAGGGGGCTTCGTCGTATGACCATTCTTCATCGACTCTGCTGC
TCTCAACCCTTGGTGCACCTTTTTCGTCACGCGGTCGGTCACGCCGTCGA
CAAACTCGTGCCTGCGATTCGCCTCAGGCATGCGTTGCATGTACCTGTGA
AATCGAATTATCTTGGTCTAGGTCAGGCAGACATTATCCTGCTAGGCGCG
GTGTTTGGACAGACCCATTGAGGATTTCTGCGTCGCGGGGGGTTTGCCGT
GCTCGGGCGCGTCTCGACACCAACACGCCCAGCCGCCTTCATGCCGAGCC
TTTCCCCGTCTCGTTGCAATACCTGAGGGAGCTGAAATCTTTTGGGGGGT
GAGGTGGCGCACGCCGGACGCGTTCCTGTCACTGATCTCGCTTCAGCAAA
CATGTTACTCGACATCCCCCGCACATTTCTCGCTACACCCTCCGTACTCC
CCGCCCGCCCGCCGCCGCCCGCTTTGGTCTTGGCGGCGTGGTTTTTTCGA
CCCCGCCCTGCGCGCAGTGAAGTACAACGAGCTACTAACGGTGCTCTGGG
ACAGGATCGACCCGACGACCCTCAATCGGCAAGGAAATGACGCAGGGACT
CAGTACCGATCAGGGTGAGTGGGGTAGGAGAGGTGCCATACGGACGGGCA
ACAGCTGGCGAGAGTGGGGGAGAGGGAGCTGGAGGGAGAGGGGGAATGGG
GGAGGGGAAGCGGAAAGGAGAAGGAAAACAGCAGGGAGAGGCAGAAGCAG
AGCGAGAGACAGAGGGTGAAAGAGAGATGAACGTTGCGGGACACGGAAAA
AAAGGGCGACGGGGAGAGGGTGTCCTCGTCCCGACACCTGCGCTGCGATG
TTGCGATTCTTGTCCAGATGAGCGGCTTCGCATCCCCACCGAGGCGAGCA
CAGCCCGGGCAGGGCCAGCGGCTGCGCATGACGTGCCATATCCTGCGTTC
CTTGCTGCGTGCTGGCGTCTGGCTTTGAGCCTGTTGTTGTGCCGTTACCC
AGGAATAGCTAGGCTGGAAGAAGCAGGCAGGAAGAAGCAGCGAGACATCA
TGCTGTTGTGGTTGTGAAGTTTCCCGTATCTCTCTGCAATGCGCTCGCCC
CCCCGCTTGCTTTCGCACACCCATGCGCACGCCTCACTTCTTTCTTTCGC
CCTCAGGATCTACTACACAACCCCGGAGCAGAAGGAAATCGCGCTCGCTT
CGAAGGCGGAGGAGCAGGCGAAATACGACAAGTGAGAGGAAGGAACACCA
ACCCTGGGTCATTTGTACACAGCCGAATGGATGCAGACCCATCGCGTGTC
AAGCAGGCGGCGACTCGCGAAATCACCGTTTGCGGCGGCGCGTGTGCCCG
AAGCCGATGCTGCCTCCGTGTGCTTGTGATATTAGCTGCTTTTCTGCAAC
GGCTGCGGGCGAGATGGTTGTCGTCACTGTCCTCCTGTATTAAGCGCTTC
CTTGCGTGCATTGATCTTTTAATCTAGGTGCACGCAAGCCCTCGTCGTGC
TGGGTCGGGGGGTCATTTTTCCTTCTGCCCCCCCCCCCCTCCCCCAGTCC
TCTCGAGGACGCGTGGTCAATGGTCTAGCCGCTAAGGCATGCAAAACATA
AGAATACGCCCCCACCCCGCCCCCCGTGTTTCACGCGGTTTAAAAGCGTG
AGCGCCGTCCTTCATCTTCTCGAATCGAGCCGTGAACAGGCAGGCAGGCA
GGTAGGCACCGACGTAATGCGGTCGTCTACTCAGGCAGACATCTCGGGCT
CTCTTTGACGGATGGATCTTCTGGTGCCTGACTTGGTACCCCCCACCCCC
GCTCAATCCTCCCCCGCCACCAGACTTTGTATGTCGTCGCCGCTTGATGC
TTCTTTCGCTCCGTCTCTATGTGATCCCTTGAGCGCCAACCAGCACGTAA
CTACTCTTATCCCACGCAGTGATACCGGTTCAAGACGTTGTTGTGGTCAC
GGACTCAAAAAGAAACAACGAGCGCGCATGCACAAACAAACTTGTTAGGA
AATAGGAGTAGTTGTTTCATGTCCGCAGAAAGTGACGGGTAAGAAGGAAA
GCTTTCACCCCGTGTTCGGCACCAACGCTGAGCCCCCGCCCCGGCCTGGC
GTTTGCCCCGTCATGCATGCAGGCCAATCGTTACAGAGATTAAGGAGGCG
ACGAAATTCTACCGGGCGGAGGAATACCACCAGAAGGTACTTGGGCTGAA
TCAAGCAAGCAGCCCGCCACCAGAGCGTTTCAGAAGGAAAATTGCGATTG
TTCTTCCTCTCTGCACTTTTTTTTTTGCGCTCCCTTCTCTCTCCCGTACG
TCCACAGATGAGCGCATTGTTGTTGCAGCTGCTGCTGCTGCCGTCCACAG
CTTGAACTCACTAGTTGATATGTCGATCCGTCGATCTCGAGCAGTTTTGT
TAGACCCCCTTCGATTTTGTCGCATTGCTGACCCACGCGAGTGTCGCGCA
GTGGCGGCAGCCTTCGAGGATTACTTCTCTTCGGATCTGGTGCCGTCTAG
CCGTTCTGTACTGCTGCCCGGTGAAGGTGTAGGGAGGGGAGGGGGGGAGG
CGAAGACGACTGACCGAGGTACATCATCAGCGAAAGGTCGGGGTCACAAG
AAGCGGGTCACGCGGGCGCCGGTCGCGCGTGCATGAAAATGATCTTCTCG
CTCCGTCGTCACGTTCCCCCACGCTCCCCTCAGGCCAGATTGCGCCGTTC
TGACGTGGCTCGCCACGAAATTATCGGGTGCACGTACGTGTCCGAACGGC
GCGAGTATGATCCCGAATGTTGCACCTTCCCTGACCCCCCCCCTCCCCCC
CTCCCACGTTCGTGCCCACGACTTCTTCACCACTGATTGCACTTCCCCTG
ATGGGACACGCCCGCCGTAGTACCTGGAGAAGGGCGGGCAGTGCTCTTTG
AAGGGCGACACCACAAATATTCGCTGCTACGGCTAGCCAAGTGTGTGGGG
AACAAGATTTTGAGCACTCCCCCTACGGCCCGTGAATAGGAACGTCGCCA
TCGGTTGCGCATCCCTCTTATTGGTCGAAAGGCGGGGCTCTACCAGACGA
GTTGGTTTTGGCAGCTTAGGAGAGAAAAGGGGAGGGGGCGTTGGGGGGGT
GAATACACGCAGAGGACGAGGTGTCGTCGTTTGTACCCTCCTGCATGCTG
CGCTCGCTGCATCGGTGTGTTGTCGAGTGTTGCGAAAAAAAAGTGGTGCG
TGCGGGGCCCTTCCGCGCAGTAGGCTGTGTTCCGCTGTGTACCGGGCGGG
TTTTCGGGATGGCAGGCCCACATGTGGTGCATGGTCAATAGGGTATCAAT
CGGGGACTCTCATGCCGAGCCTCTTCGTTTGGAAGTTTTTTCGGAGATGG
AAAAGAACACAGCAGTACTCGCATTTATGTGGATATCCTTTTCAACTAAG
GTCGAGCCGAGTCTCTTCGTACAACGAGCGACTTGCGTTGTTTCTTTCCC
ATGCCGATATGCTTAGACTCCGGGGCGCCCGCTGCTGACCTTTTTCGTGT
TTCCGGGTTTGGGGTGCAATCGCTTTTCCCGTGACTCAAGAAGTGAACAA
GTTGACGCTTGGCTCTCTCTGGCGGCACTGTATGTTGTAGATGATGCATT
TTTTTCTCATTTTGCATAATTCTCCACAGCAGTATGTCGAGCGAAAAAAA
CGGCATTACCGGCTAGTATTGCCAACGGTTTCCCCTCGGAAATGCACGTG
ATTCGGTCGGTCGGCCGCGTTCTAGCTCAAAACTAGACATGGTGAAATGG
TATTTGATGTGGTCAAGGAAAATAATATGGACGGACGCCGAGTGAGTTGA
CTATGCAACACCATGGCGGAAGTGGTTCATGTTGCCGTGGCGACATGTTG
CAGTGTGGTGAGTACAAGCTGAGAGGTGAATTCAACGTCGCATAGTAATT
TTTTGTGGACGTGTGAAGGAGAGCGCTGCCTTGTCACAGCGATCCAGTCT
AAACTCGAGGAACGAGAAGGTGAAGATTGACGAGAAGAGCCAAACTCTCC
AGTTCCCTCTGCTTGCCCCCAAAGGTATACCCTAAAAAAAAGATCTTTGC
TTGCCCCTGTCAATCCCGCGGAATTTTTTGTGCCCCCAAATGCCCCGCGG
AATCGACCCATCGGCCCGCTCTCTCCGCATCACAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig18:1758399..1764233-

>mRNA_P-fluviatile_contig18.3285.1 ID=mRNA_P-fluviatile_contig18.3285.1|Name=mRNA_P-fluviatile_contig18.3285.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1158bp|location=Sequence derived from alignment at P-fluviatile_contig18:1758399..1764233- (Porterinema fluviatile SAG_2381)
ATGGGAAACGCCAAATCAATGTCGCTCGGACCAGAAGCACACGCTATCAT
CACGAAGGCCGTTTCACAGCTGCCTCCGCCTCCAGCAATCGAAACGGGGA
TTTTCGCGGCAGATGGGAAACGCCAAATCAATGTCGCTCGGACCAGAAGC
ACACGCTATCATCACGAAGGCCGTTTCACAGCTGCCTCCGCCTCCAGCAA
TCGAAACGGGGATTTTCGCGGCAGGCTGCTTCTGGGGCGTGGAGCTCGCC
TACCAGCGCGTCCCGGGCGTGCTGGAGACAGAGGTCGGCTACACCGACGG
CCACAAGAAGGACCCGACCTATCAGGAGGTGTGCTCCGGAACGACGGGCC
ACACAGAGGCTCTGCAAGTCAAGTTCGACCCGCGCGTCGGCTGCTTCTGG
GGCGTGGAGCTCGCCTACCAGCGCGTCCCGGGCGTGCTGGAGACAGAGGT
CGGCTACACCGACGGCCACAAGAAGGACCCGACCTATCAGGAGGTGTGCT
CCGGAACGACGGGCCACACAGAGGCTCTGCAAGTCAAGTTCGACCCGCGC
GTCGTGAAGTACAACGAGCTACTAACGGTGCTCTGGGACAGGATCGACCC
GACGACCCTCAATCGGCAAGGAAATGACGCAGGGACTCAGTACCGATCAG
GTGAAGTACAACGAGCTACTAACGGTGCTCTGGGACAGGATCGACCCGAC
GACCCTCAATCGGCAAGGAAATGACGCAGGGACTCAGTACCGATCAGGGA
TCTACTACACAACCCCGGAGCAGAAGGAAATCGCGCTCGCTTCGAAGGCG
GAGGAGCAGGCGAAATACGACAAGATCTACTACACAACCCCGGAGCAGAA
GGAAATCGCGCTCGCTTCGAAGGCGGAGGAGCAGGCGAAATACGACAAGC
CAATCGTTACAGAGATTAAGGAGGCGACGAAATTCTACCGGGCGGAGGAA
TACCACCAGAAGGCCAATCGTTACAGAGATTAAGGAGGCGACGAAATTCT
ACCGGGCGGAGGAATACCACCAGAAGTACCTGGAGAAGGGCGGGCAGTGC
TCTTTGAAGGGCGACACCACAAATATTCGCTGCTACGGCTAGTACCTGGA
GAAGGGCGGGCAGTGCTCTTTGAAGGGCGACACCACAAATATTCGCTGCT
ACGGCTAG
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