mRNA_P-fluviatile_contig18.3276.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 462 bits (1188), Expect = 3.390e-157 Identity = 229/234 (97.86%), Postives = 230/234 (98.29%), Query Frame = 2
Query: 152 PEADHVHNTDETGEILGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
PEADHVHNTDETG TTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRG+IDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL
Sbjct: 158 PEADHVHNTDETG----TTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 387
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE) HSP 1 Score: 462 bits (1188), Expect = 3.300e-154 Identity = 229/234 (97.86%), Postives = 230/234 (98.29%), Query Frame = 2
Query: 152 PEADHVHNTDETGEILGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
PEADHVHNTDETG TTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRG+IDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL
Sbjct: 399 PEADHVHNTDETG----TTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 628
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE) HSP 1 Score: 381 bits (978), Expect = 2.290e-128 Identity = 186/234 (79.49%), Postives = 209/234 (89.32%), Query Frame = 2
Query: 152 PEADHVHNTDETGEILGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
P+ADHVHNTDETG TPQG KTMKA+ +AGQKVVES+R+NS ENTT+VTTISA+G+TWAPTIIFKGQRLQPDWFAE+NGP DARYTCTDSSFMQG+VFIKYLKDFH+QL RGV+DGKPH L+LDGHASHVS EVI+LAMELNI+LFQLPSHTSHITQPLDVVAFG FK+EVTKVL DYY +GGLLP KRDVPGVIAAAW + T ERN +SF GAGL PV+M+RA++RL
Sbjct: 154 PKADHVHNTDETGP----TPQGTKTMKAFAEAGQKVVESMRSNSLENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFHKQLDDRGVLDGKPHTLVLDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQRSLTLERNNASFGGAGLRPVDMDRALTRL 383
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5KHG4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG4_9PHAE) HSP 1 Score: 362 bits (930), Expect = 1.040e-120 Identity = 177/225 (78.67%), Postives = 197/225 (87.56%), Query Frame = 2
Query: 152 PEADHVHNTDETGEILGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPV 826
PEADHVHNTDETG TTPQG KTMKA+ + GQKVVES+R+NSREN T+VTTIS +G TWAPTIIFKGQRLQ DWFAE+NGP DARYTCTDSSFMQG+VFIKYLKDF++QL RGV+DGKPHIL+L GHAS VS EVI+LAMELNI+LFQLPSHTSHITQPLDVVAFG FK+EVTKVL DYY +GG LP KRDVP VIAAAW +FT ERN++SF GAGLWP+
Sbjct: 97 PEADHVHNTDETG----TTPQGTKTMKAFAEVGQKVVESMRSNSRENATVVTTISTNGVTWAPTIIFKGQRLQLDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFYKQLDDRGVLDGKPHILVLGGHASLVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGSLPLKRDVPSVIAAAWQRSFTPERNKASFGGAGLWPL 317
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5KGL1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL1_9PHAE) HSP 1 Score: 351 bits (901), Expect = 1.160e-117 Identity = 167/209 (79.90%), Postives = 192/209 (91.87%), Query Frame = 2
Query: 227 MKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
MKA+ +AGQKVVES+R+NSRENTT+VTTISA+G+TWAPTIIFKGQRLQPDWFAE+NGP DARYTCTDSSFMQG+VFI YLKDFH+QL RGV+DGKPHIL+LDGHASHVS E I+LAM+LNI+LF+LPSHTSHITQPLDVVAFG FK+EVTKVL DYY +GGLLP KRDVPGVIAAAW + T ERN++SF GAGLWPV+M+RA++RL
Sbjct: 1 MKAFAEAGQKVVESMRSNSRENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIMYLKDFHKQLDDRGVLDGKPHILVLDGHASHVSYEFIKLAMDLNIILFKLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQNSLTPERNKASFGGAGLWPVDMDRALTRL 209
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5K3Q3_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q3_9PHAE) HSP 1 Score: 346 bits (888), Expect = 3.980e-115 Identity = 180/278 (64.75%), Postives = 208/278 (74.82%), Query Frame = 2
Query: 152 PEADHVHNTDETGEILGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAME-----------------------------------LNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNR---------SSFAGAGLWPVNMERAMSRL 853
P+ADHVHNTDET TTPQG TMKA+ +AGQKVV S+R+NSR NTT+VTTISA+ +TWAPTIIFKGQ+LQPD FAE+NGP DARYTCT+SSFMQG+VF+KYLKDFH+QL R V+DGKPHIL+LDGHASHVS EVI+LAME LNI+LFQLPSHTSHITQPLDVVAFG FK+EVT+VL DYY +GGLLP KRDVPGVIAAAW +FT ERN+ +SF GAGLWPV+M+RA++RL
Sbjct: 88 PKADHVHNTDETS----TTPQGTTTMKAFAEAGQKVVASMRSNSRGNTTVVTTISANDATWAPTIIFKGQQLQPDCFAERNGPKDARYTCTNSSFMQGDVFVKYLKDFHKQLDDRSVLDGKPHILVLDGHASHVSYEVIKLAMEXSPSRGQGAAAAQGAALPVRQPAPSLSRPPMRLSELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTEVLQDYYHANGGLLPLKRDVPGVIAAAWQRSFTPERNKKHPSAGRGXASFGGAGLWPVDMDRALTRL 361
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5J9B8_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B8_9PHAE) HSP 1 Score: 343 bits (880), Expect = 7.760e-115 Identity = 163/209 (77.99%), Postives = 188/209 (89.95%), Query Frame = 2
Query: 227 MKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
MK + +AGQ VVES+R+NSRENTT+VTTISA+G+TWAPTIIF+GQRLQPDWFAE+NGP DARYTCTDSSFMQG+VFIKY KDFH+QL RGV+DGKPH L+LD HAS+VS EVI+LAMELNI+LFQLPSHTSHITQPLDVVAFG FK+EVT VL DYY +GGLLP KRDVPGVIAAAW +FT ERN++SF G GLWPV+M+RA++RL
Sbjct: 1 MKTFAEAGQTVVESMRSNSRENTTVVTTISANGATWAPTIIFRGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYFKDFHKQLDDRGVLDGKPHTLVLDEHASYVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTTVLQDYYHANGGLLPLKRDVPGVIAAAWQRSFTPERNKASFGGVGLWPVDMDRALTRL 209
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5JE68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE68_9PHAE) HSP 1 Score: 341 bits (874), Expect = 1.040e-111 Identity = 164/216 (75.93%), Postives = 191/216 (88.43%), Query Frame = 2
Query: 197 LGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAM 844
+ TT QG KTMKA+ +A QKVVES+ +NSRENTT+VTT SA+G+TWAPT IFKGQ+LQPDWFAE+NGP DARYTC +SSFMQG+VFIKYLKDFH+QL RGV+D KPHIL+LDGHASHVS EVI+LAME+NI+LFQLPSHTSHITQPLDVVAFG FK+EVTKVL DYY +GGLL KRDVPGVIAAAW +FT ER+++SF GA LWPV+M+RA+
Sbjct: 166 MWTTLQGTKTMKAFAEAEQKVVESMLSNSRENTTVVTTNSANGATWAPTTIFKGQQLQPDWFAERNGPKDARYTCANSSFMQGDVFIKYLKDFHKQLDDRGVLDRKPHILVLDGHASHVSYEVIKLAMEVNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLSLKRDVPGVIAAAWRRSFTPERSKASFGGAALWPVDMDRAL 381
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5JYS0_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS0_9PHAE) HSP 1 Score: 337 bits (865), Expect = 3.280e-110 Identity = 180/285 (63.16%), Postives = 205/285 (71.93%), Query Frame = 2
Query: 2 GRIG*LASSKGTRGLGSAPLASTRPTESPMRANLAS*SSTGSGQLSSRTLPEADHVHNTDETGEILGTTPQGNKTMKAYCQAGQKVVESVRANSRENTT-LVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
G+IG AS GT G SA ASTR T SP +LA TPQG KT KA+ ++GQKVV S+R+NSRENTT +V TISADG TWAPTIIFKG RLQ DWF E+NGP ARYTCTDSSFMQG+VFI YLKDFH+Q +RG++DGKPHILLLDGH+SHV VEV +LAM L I+L QLPSHTSHITQPLDVVAFG FK+ VT+VL+ +Y SGGLLP KRD+PGVIA AW +FT E N+SSFAGAGLWPVN ERA+ RL
Sbjct: 109 GKIGLRASFVGTYGWRSARPASTRQTGSPRTRSLA-----------------------------WCSNTPQGTKTTKAFAESGQKVVGSMRSNSRENTTTVVVTISADGHTWAPTIIFKGHRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQFGERGLLDGKPHILLLDGHSSHVRVEVTRLAMNLKIILIQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRL 364
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE) HSP 1 Score: 332 bits (852), Expect = 2.160e-109 Identity = 168/244 (68.85%), Postives = 194/244 (79.51%), Query Frame = 2
Query: 152 PEADHVHNTDETGEILGTT---PQGNKTMKAYCQAGQ-------KVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
PEA+HVHNTDET P+ + +A+ KVV S+R+NSRENTT+V TISADG TWAPTIIFKGQRLQ DWF E+NG A+YTCTD SFMQG++FI YLKDFH+QLC RG++DGKPHILLLDGHASHVSVEVI+LAM L I+LFQLPSHTSHITQPLDVVAFG+FK+ VT+VL+ +YR SGGLLP KRD+PGVIA AW +FT E N+SSFAGAGLWPVN ERA+ RL
Sbjct: 159 PEANHVHNTDETEPPRXHRRKGPEAAEGARAHRHGNPSRHGXDCKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGLEGAKYTCTDYSFMQGDLFIAYLKDFHKQLCDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRL 402 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3276.1 >prot_P-fluviatile_contig18.3276.1 ID=prot_P-fluviatile_contig18.3276.1|Name=mRNA_P-fluviatile_contig18.3276.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=209bp MKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDback to top mRNA from alignment at P-fluviatile_contig18:1693849..1694969+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig18.3276.1 ID=mRNA_P-fluviatile_contig18.3276.1|Name=mRNA_P-fluviatile_contig18.3276.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1121bp|location=Sequence derived from alignment at P-fluviatile_contig18:1693849..1694969+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig18:1693849..1694969+ >mRNA_P-fluviatile_contig18.3276.1 ID=mRNA_P-fluviatile_contig18.3276.1|Name=mRNA_P-fluviatile_contig18.3276.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1254bp|location=Sequence derived from alignment at P-fluviatile_contig18:1693849..1694969+ (Porterinema fluviatile SAG_2381)back to top |