mRNA_P-fluviatile_contig18.3276.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig18.3276.1
Unique NamemRNA_P-fluviatile_contig18.3276.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE)

HSP 1 Score: 462 bits (1188), Expect = 3.390e-157
Identity = 229/234 (97.86%), Postives = 230/234 (98.29%), Query Frame = 2
Query:  152 PEADHVHNTDETGEILGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
            PEADHVHNTDETG    TTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRG+IDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL
Sbjct:  158 PEADHVHNTDETG----TTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 387          
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE)

HSP 1 Score: 462 bits (1188), Expect = 3.300e-154
Identity = 229/234 (97.86%), Postives = 230/234 (98.29%), Query Frame = 2
Query:  152 PEADHVHNTDETGEILGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
            PEADHVHNTDETG    TTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRG+IDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL
Sbjct:  399 PEADHVHNTDETG----TTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 628          
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 2.290e-128
Identity = 186/234 (79.49%), Postives = 209/234 (89.32%), Query Frame = 2
Query:  152 PEADHVHNTDETGEILGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
            P+ADHVHNTDETG     TPQG KTMKA+ +AGQKVVES+R+NS ENTT+VTTISA+G+TWAPTIIFKGQRLQPDWFAE+NGP DARYTCTDSSFMQG+VFIKYLKDFH+QL  RGV+DGKPH L+LDGHASHVS EVI+LAMELNI+LFQLPSHTSHITQPLDVVAFG FK+EVTKVL DYY  +GGLLP KRDVPGVIAAAW  + T ERN +SF GAGL PV+M+RA++RL
Sbjct:  154 PKADHVHNTDETGP----TPQGTKTMKAFAEAGQKVVESMRSNSLENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFHKQLDDRGVLDGKPHTLVLDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQRSLTLERNNASFGGAGLRPVDMDRALTRL 383          
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5KHG4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG4_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 1.040e-120
Identity = 177/225 (78.67%), Postives = 197/225 (87.56%), Query Frame = 2
Query:  152 PEADHVHNTDETGEILGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPV 826
            PEADHVHNTDETG    TTPQG KTMKA+ + GQKVVES+R+NSREN T+VTTIS +G TWAPTIIFKGQRLQ DWFAE+NGP DARYTCTDSSFMQG+VFIKYLKDF++QL  RGV+DGKPHIL+L GHAS VS EVI+LAMELNI+LFQLPSHTSHITQPLDVVAFG FK+EVTKVL DYY  +GG LP KRDVP VIAAAW  +FT ERN++SF GAGLWP+
Sbjct:   97 PEADHVHNTDETG----TTPQGTKTMKAFAEVGQKVVESMRSNSRENATVVTTISTNGVTWAPTIIFKGQRLQLDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFYKQLDDRGVLDGKPHILVLGGHASLVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGSLPLKRDVPSVIAAAWQRSFTPERNKASFGGAGLWPL 317          
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5KGL1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL1_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 1.160e-117
Identity = 167/209 (79.90%), Postives = 192/209 (91.87%), Query Frame = 2
Query:  227 MKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
            MKA+ +AGQKVVES+R+NSRENTT+VTTISA+G+TWAPTIIFKGQRLQPDWFAE+NGP DARYTCTDSSFMQG+VFI YLKDFH+QL  RGV+DGKPHIL+LDGHASHVS E I+LAM+LNI+LF+LPSHTSHITQPLDVVAFG FK+EVTKVL DYY  +GGLLP KRDVPGVIAAAW  + T ERN++SF GAGLWPV+M+RA++RL
Sbjct:    1 MKAFAEAGQKVVESMRSNSRENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIMYLKDFHKQLDDRGVLDGKPHILVLDGHASHVSYEFIKLAMDLNIILFKLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQNSLTPERNKASFGGAGLWPVDMDRALTRL 209          
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5K3Q3_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q3_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 3.980e-115
Identity = 180/278 (64.75%), Postives = 208/278 (74.82%), Query Frame = 2
Query:  152 PEADHVHNTDETGEILGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAME-----------------------------------LNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNR---------SSFAGAGLWPVNMERAMSRL 853
            P+ADHVHNTDET     TTPQG  TMKA+ +AGQKVV S+R+NSR NTT+VTTISA+ +TWAPTIIFKGQ+LQPD FAE+NGP DARYTCT+SSFMQG+VF+KYLKDFH+QL  R V+DGKPHIL+LDGHASHVS EVI+LAME                                   LNI+LFQLPSHTSHITQPLDVVAFG FK+EVT+VL DYY  +GGLLP KRDVPGVIAAAW  +FT ERN+         +SF GAGLWPV+M+RA++RL
Sbjct:   88 PKADHVHNTDETS----TTPQGTTTMKAFAEAGQKVVASMRSNSRGNTTVVTTISANDATWAPTIIFKGQQLQPDCFAERNGPKDARYTCTNSSFMQGDVFVKYLKDFHKQLDDRSVLDGKPHILVLDGHASHVSYEVIKLAMEXSPSRGQGAAAAQGAALPVRQPAPSLSRPPMRLSELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTEVLQDYYHANGGLLPLKRDVPGVIAAAWQRSFTPERNKKHPSAGRGXASFGGAGLWPVDMDRALTRL 361          
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5J9B8_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B8_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 7.760e-115
Identity = 163/209 (77.99%), Postives = 188/209 (89.95%), Query Frame = 2
Query:  227 MKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
            MK + +AGQ VVES+R+NSRENTT+VTTISA+G+TWAPTIIF+GQRLQPDWFAE+NGP DARYTCTDSSFMQG+VFIKY KDFH+QL  RGV+DGKPH L+LD HAS+VS EVI+LAMELNI+LFQLPSHTSHITQPLDVVAFG FK+EVT VL DYY  +GGLLP KRDVPGVIAAAW  +FT ERN++SF G GLWPV+M+RA++RL
Sbjct:    1 MKTFAEAGQTVVESMRSNSRENTTVVTTISANGATWAPTIIFRGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYFKDFHKQLDDRGVLDGKPHTLVLDEHASYVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTTVLQDYYHANGGLLPLKRDVPGVIAAAWQRSFTPERNKASFGGVGLWPVDMDRALTRL 209          
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5JE68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE68_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 1.040e-111
Identity = 164/216 (75.93%), Postives = 191/216 (88.43%), Query Frame = 2
Query:  197 LGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAM 844
            + TT QG KTMKA+ +A QKVVES+ +NSRENTT+VTT SA+G+TWAPT IFKGQ+LQPDWFAE+NGP DARYTC +SSFMQG+VFIKYLKDFH+QL  RGV+D KPHIL+LDGHASHVS EVI+LAME+NI+LFQLPSHTSHITQPLDVVAFG FK+EVTKVL DYY  +GGLL  KRDVPGVIAAAW  +FT ER+++SF GA LWPV+M+RA+
Sbjct:  166 MWTTLQGTKTMKAFAEAEQKVVESMLSNSRENTTVVTTNSANGATWAPTTIFKGQQLQPDWFAERNGPKDARYTCANSSFMQGDVFIKYLKDFHKQLDDRGVLDRKPHILVLDGHASHVSYEVIKLAMEVNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLSLKRDVPGVIAAAWRRSFTPERSKASFGGAALWPVDMDRAL 381          
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5JYS0_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS0_9PHAE)

HSP 1 Score: 337 bits (865), Expect = 3.280e-110
Identity = 180/285 (63.16%), Postives = 205/285 (71.93%), Query Frame = 2
Query:    2 GRIG*LASSKGTRGLGSAPLASTRPTESPMRANLAS*SSTGSGQLSSRTLPEADHVHNTDETGEILGTTPQGNKTMKAYCQAGQKVVESVRANSRENTT-LVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
            G+IG  AS  GT G  SA  ASTR T SP   +LA                                 TPQG KT KA+ ++GQKVV S+R+NSRENTT +V TISADG TWAPTIIFKG RLQ DWF E+NGP  ARYTCTDSSFMQG+VFI YLKDFH+Q  +RG++DGKPHILLLDGH+SHV VEV +LAM L I+L QLPSHTSHITQPLDVVAFG FK+ VT+VL+ +Y  SGGLLP KRD+PGVIA AW  +FT E N+SSFAGAGLWPVN ERA+ RL
Sbjct:  109 GKIGLRASFVGTYGWRSARPASTRQTGSPRTRSLA-----------------------------WCSNTPQGTKTTKAFAESGQKVVGSMRSNSRENTTTVVVTISADGHTWAPTIIFKGHRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQFGERGLLDGKPHILLLDGHSSHVRVEVTRLAMNLKIILIQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRL 364          
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 2.160e-109
Identity = 168/244 (68.85%), Postives = 194/244 (79.51%), Query Frame = 2
Query:  152 PEADHVHNTDETGEILGTT---PQGNKTMKAYCQAGQ-------KVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 853
            PEA+HVHNTDET          P+  +  +A+            KVV S+R+NSRENTT+V TISADG TWAPTIIFKGQRLQ DWF E+NG   A+YTCTD SFMQG++FI YLKDFH+QLC RG++DGKPHILLLDGHASHVSVEVI+LAM L I+LFQLPSHTSHITQPLDVVAFG+FK+ VT+VL+ +YR SGGLLP KRD+PGVIA AW  +FT E N+SSFAGAGLWPVN ERA+ RL
Sbjct:  159 PEANHVHNTDETEPPRXHRRKGPEAAEGARAHRHGNPSRHGXDCKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGLEGAKYTCTDYSFMQGDLFIAYLKDFHKQLCDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRL 402          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV04_9PHAE3.390e-15797.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ12_9PHAE3.300e-15497.86Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JBS6_9PHAE2.290e-12879.49DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KHG4_9PHAE1.040e-12078.67DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KGL1_9PHAE1.160e-11779.90DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K3Q3_9PHAE3.980e-11564.75DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5J9B8_9PHAE7.760e-11577.99DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5JE68_9PHAE1.040e-11175.93DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JYS0_9PHAE3.280e-11063.16DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5JRA3_9PHAE2.160e-10968.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig18contigP-fluviatile_contig18:1693849..1694969 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score197.2
Seed ortholog evalue7.6e-48
Seed eggNOG ortholog2880.D8LN28
EggNOG free text desc.DDE superfamily endonuclease
EggNOG OGs2CZS4@1,2SBGG@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size853
Cds size627
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig18.3276.1prot_P-fluviatile_contig18.3276.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig18 1694343..1694969 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815769.4740875-UTR-P-fluviatile_contig18:1693848..16940431622815769.4740875-UTR-P-fluviatile_contig18:1693848..1694043Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1693849..1694043 +
1693563276.693696-UTR-P-fluviatile_contig18:1693848..16940431693563276.693696-UTR-P-fluviatile_contig18:1693848..1694043Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1693849..1694043 +
1622815769.4876878-UTR-P-fluviatile_contig18:1694311..16943421622815769.4876878-UTR-P-fluviatile_contig18:1694311..1694342Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1694312..1694342 +
1693563276.709948-UTR-P-fluviatile_contig18:1694311..16943421693563276.709948-UTR-P-fluviatile_contig18:1694311..1694342Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1694312..1694342 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815769.501964-CDS-P-fluviatile_contig18:1694342..16949691622815769.501964-CDS-P-fluviatile_contig18:1694342..1694969Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1694343..1694969 +
1693563276.7183812-CDS-P-fluviatile_contig18:1694342..16949691693563276.7183812-CDS-P-fluviatile_contig18:1694342..1694969Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1694343..1694969 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig18.3276.1

>prot_P-fluviatile_contig18.3276.1 ID=prot_P-fluviatile_contig18.3276.1|Name=mRNA_P-fluviatile_contig18.3276.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=209bp
MKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPD
WFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGVIDGKPHIL
LLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREV
TKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPV
NMERAMSRL
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mRNA from alignment at P-fluviatile_contig18:1693849..1694969+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig18.3276.1 ID=mRNA_P-fluviatile_contig18.3276.1|Name=mRNA_P-fluviatile_contig18.3276.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1121bp|location=Sequence derived from alignment at P-fluviatile_contig18:1693849..1694969+ (Porterinema fluviatile SAG_2381)
GGGAAGGATTGGCTAGCTGGCTTCCTCGAAAGGCACCCGCGGGTTAGGGA GCGCACCACTCGCATCTACGAGGCCAACAGAGTCACCGATGAGAGCGAAC CTCGCATCGTAGAGTTCTACAGGAAGTGGGCAGCTCTCCTCGAGGACCCT GCCGGAGGCCGACCACGTGCACAACACGGATGAGACAGGTGAGATGTACC TGTAGACTAGTCTAGACTAGTGTGGTATCAACAGGAGCTGTATTAGGCGA GCTCCTGTGCAAAGATCTCGAAGGTAGCATGTCAATATCTGGCGGAGTTC TGCCGTCGGCCGGACTTGCGTGCGGCGTTTTGCGTACACAGCAGTATCTA CTCTAGGACCCGGTCTTCGTTGCATGGTTTTTGTGCGTGGGTAAACCTTC GCATCTTGTATGTGCCTTTACGTTTCTCTCCCCTGTTCTCCTCCTCTCTC GCGATTGATTTAGACTAGGTACCACTCCGCAAGGCAACAAGACCATGAAG GCCTACTGTCAGGCAGGGCAGAAGGTGGTCGAGTCGGTTCGGGCCAACTC GCGAGAGAACACCACCTTGGTCACCACCATCAGCGCTGATGGCTCCACGT GGGCGCCGACTATCATCTTCAAAGGGCAGCGACTCCAGCCTGACTGGTTT GCGGAGAAGAACGGGCCGCCGGACGCGAGGTACACTTGTACGGATTCTTC GTTCATGCAGGGTAACGTGTTCATCAAGTACCTTAAAGACTTCCACCAGC AGCTTTGCAAACGAGGCGTGATCGACGGAAAGCCGCACATCCTCCTGCTT GATGGACACGCATCGCACGTGAGCGTCGAGGTCATCCAACTGGCCATGGA ACTCAACATCGTCCTCTTTCAGCTGCCGTCCCACACGTCGCACATCACCC AGCCCTTGGACGTCGTCGCCTTCGGAGCCTTCAAGAGGGAGGTGACTAAG GTGTTGTCAGACTACTACCGCGTGTCCGGCGGGTTGCTTCCACAGAAGCG TGACGTCCCCGGCGTTATCGCGGCGGCTTGGGGGGCGACTTTCACATCGG AGCGAAATAGATCATCCTTCGCCGGGGCGGGCCTGTGGCCTGTGAACATG GAGCGAGCGATGAGCCGGCTT
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Coding sequence (CDS) from alignment at P-fluviatile_contig18:1693849..1694969+

>mRNA_P-fluviatile_contig18.3276.1 ID=mRNA_P-fluviatile_contig18.3276.1|Name=mRNA_P-fluviatile_contig18.3276.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1254bp|location=Sequence derived from alignment at P-fluviatile_contig18:1693849..1694969+ (Porterinema fluviatile SAG_2381)
ATGAAGGCCTACTGTCAGGCAGGGCAGAAGGTGGTCGAGTCGGTTCGGGC
CAACTCGCGAGAGAACACCACCTTGGTCACCACCATCAGCGCTGATGGCT
CCACGTGGGCGCCGACTATCATCTTCAAAGGGCAGCGACTCCAGCCTGAC
TGGTTTGCGGAGAAGAACGGGCCGCCGGACGCGAGGTACACTTGTACGGA
TTCTTCGTTCATGCAGGGTAACGTGTTCATCAAGTACCTTAAAGACTTCC
ACCAGCAGCTTTGCAAACGAGGCGTGATCGACGGAAAGCCGCACATCCTC
CTGCTTGATGGACACGCATCGCACGTGAGCGTCGAGGTCATCCAACTGGC
CATGGAACTCAACATCGTCCTCTTTCAGCTGCCGTCCCACACGTCGCACA
TCACCCAGCCCTTGGACGTCGTCGCCTTCGGAGCCTTCAAGAGGGAGGTG
ACTAAGGTGTTGTCAGACTACTACCGCGTGTCCGGCGGGTTGCTTCCACA
GAAGCGTGACGTCCCCGGCGTTATCGCGGCGGCTTGGGGGGCGACTTTCA
CATCGGAGCGAAATAGATCATCCTTCGCCGGGGCGGGCCTGTGGCCTGTG
AACATGGAGCGAGCGATGAGCCGGCTTATGAAGGCCTACTGTCAGGCAGG
GCAGAAGGTGGTCGAGTCGGTTCGGGCCAACTCGCGAGAGAACACCACCT
TGGTCACCACCATCAGCGCTGATGGCTCCACGTGGGCGCCGACTATCATC
TTCAAAGGGCAGCGACTCCAGCCTGACTGGTTTGCGGAGAAGAACGGGCC
GCCGGACGCGAGGTACACTTGTACGGATTCTTCGTTCATGCAGGGTAACG
TGTTCATCAAGTACCTTAAAGACTTCCACCAGCAGCTTTGCAAACGAGGC
GTGATCGACGGAAAGCCGCACATCCTCCTGCTTGATGGACACGCATCGCA
CGTGAGCGTCGAGGTCATCCAACTGGCCATGGAACTCAACATCGTCCTCT
TTCAGCTGCCGTCCCACACGTCGCACATCACCCAGCCCTTGGACGTCGTC
GCCTTCGGAGCCTTCAAGAGGGAGGTGACTAAGGTGTTGTCAGACTACTA
CCGCGTGTCCGGCGGGTTGCTTCCACAGAAGCGTGACGTCCCCGGCGTTA
TCGCGGCGGCTTGGGGGGCGACTTTCACATCGGAGCGAAATAGATCATCC
TTCGCCGGGGCGGGCCTGTGGCCTGTGAACATGGAGCGAGCGATGAGCCG
GCTT
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