mRNA_P-fluviatile_contig18.3275.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig18.3275.1 vs. uniprot
Match: A0A6H5KTC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC1_9PHAE) HSP 1 Score: 424 bits (1089), Expect = 1.020e-132 Identity = 219/260 (84.23%), Postives = 235/260 (90.38%), Query Frame = 3
Query: 507 GDKENTAN-GTGKRATLVLVSKYPTPGSSKTRLIPAFGTMFAAQLAMAMLQDLLRRFAMEDTTREFRKVFVYAPPSAGPAVHKMLEDLGLDKSWDAEPVSAGTALRESGLTTILEAALASARARER-GAVIFVGMDTPELPWSEVVAAKTSAEKEGKAYICPASDGGYTLLGLPAAAARGTFEGVKWSDALTCKSQMRALASRGVLTRIGGTYHDVDEADDVAGLEKRSPRGLAESPCPQTLGVARAAL--QLLPRVWVG 1274
GDKE+ AN G+RATLVLVSKYPTPGSSKTRLIPA G AAQLAMAMLQDLL+RF++ED EFRKVFVYAPPSAGP+V+KML+DLGLDK+WDAEPVS+GT LRESGLTTILEAALASAR+RER GAVIFVGMDTPELPWSEVVAA++SAEK+GKAYICPASDGGYTLLGLP A RGTFEGVKWSD+LTCKSQ ALASRGV TR GGTYHDVDEADDVAGLEKRSPRGL SPCPQTLG+AR AL QLLPRVWVG
Sbjct: 4 GDKEHKANKDAGRRATLVLVSKYPTPGSSKTRLIPALGEALAAQLAMAMLQDLLKRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKAWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICPASDGGYTLLGLPPKAGRGTFEGVKWSDSLTCKSQTLALASRGVSTRTGGTYHDVDEADDVAGLEKRSPRGLEGSPCPQTLGIARTALRRQLLPRVWVG 263
BLAST of mRNA_P-fluviatile_contig18.3275.1 vs. uniprot
Match: D8LGD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD1_ECTSI) HSP 1 Score: 258 bits (660), Expect = 1.010e-75 Identity = 135/162 (83.33%), Postives = 149/162 (91.98%), Query Frame = 3
Query: 507 GDKENTAN-GTGKRATLVLVSKYPTPGSSKTRLIPAFGTMFAAQLAMAMLQDLLRRFAMEDTTREFRKVFVYAPPSAGPAVHKMLEDLGLDKSWDAEPVSAGTALRESGLTTILEAALASARARER-GAVIFVGMDTPELPWSEVVAAKTSAEKEGKAYICP 986
GDKE+ AN G+RATLVLVSKYPTPGSSKTRLIPA G AAQLAMAMLQDLL+RF++ED EFRKVFVYAPPSAGP+V+KML+DLGLDK+WDAEPVS+GT LRESGLTTILEAALASAR+RER GAVIFVGMDTPELPWSEVVAA++SAEK+GKAYICP
Sbjct: 4 GDKEHKANKDAGRRATLVLVSKYPTPGSSKTRLIPALGEALAAQLAMAMLQDLLQRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKTWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICP 165
BLAST of mRNA_P-fluviatile_contig18.3275.1 vs. uniprot
Match: A0A835Z1N4_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N4_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.930e-48 Identity = 106/236 (44.92%), Postives = 137/236 (58.05%), Query Frame = 3
Query: 549 TLVLVSKYPTPGSSKTRLIPAFGTMFAAQLAMAMLQDLLRRFAMEDTTREFRKVFVYAPPSAGPAVHKMLEDLGLDKSWDAEPVSAGTALRESGLTTILEAALASARAR-ERGAVIFVGMDTPELPWSEVVAAKTSAEKEGKAYICPASDGGYTLLGLPAAAARGTFEGVKWSDALTCKSQMRALASRGVLTRIGGTYHDVDEADDVAGLEKRSPRGLAESP-CPQTLGVARAALQ 1250
+LVL++K P G SKTRLI FG QLA AML DLLRRF R R+V VYAPP A K++ + G++ W PV+ GT L+++ LT IL+ AL R G V+FVGMDTP LP E++ A E A +CPA+DGGYTLLG+P A F+GV WS TC++Q+ L G+ IG TY D+D A+DV + + A + CP TL A AAL+
Sbjct: 5 SLVLIAKCPRMGISKTRLIACFGEEATFQLARAMLLDLLRRFGSSAELRSLRRVLVYAPPEARDEAAKLVREAGVEHEWVLTPVAGGTKLKDADLTAILKDALEGTREEGTTGTVVFVGMDTPHLPSFEIIEACRKGA-EDVALVCPANDGGYTLLGVPRNAPAKIFDGVLWSSPKTCETQVTRLRECGISVMIGATYEDLDTAEDVHSWHRTATATSAAAHICPLTLEAAAAALR 239
BLAST of mRNA_P-fluviatile_contig18.3275.1 vs. uniprot
Match: A0A7S2CAW3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CAW3_9STRA) HSP 1 Score: 163 bits (412), Expect = 6.660e-40 Identity = 103/277 (37.18%), Postives = 140/277 (50.54%), Query Frame = 3
Query: 543 RATLVLVSKYPTPGSSKTRLIPAFGTMFAAQLAMAMLQDLLRRFAMEDTTREFRKVFVYAPPSAGPAVHKMLEDLGLDKS-WDAEPVSAGTALRESGLTTILEAALASARA---------------RERGAVIFVGMDTPELPWSEVVAAKTSAEKEGKAYICPASDGGYTLLGLPAAAARGTFEGVKWSDALTCKSQMRALASRGVLTRIGGTYHDVDEADDVAGLEKRS--------PRGLAESPCPQTLGVARAALQLLPRVWVG*PSGSREDR 1301
R ++LV+K+PT G SKTRL+PA G +A A++ D L + KV ++AP S+ ++L+DLGLD + W P+ G LR S L L L ARA RGA +F+GMD PE+ ++ A +A G AYICPA+DGGYTLL LP A F GV+WS TC SQM +AS+G+ +G TY D+D+ D+ GL +R P L ES T + A +LP SG ++ R
Sbjct: 52 RDVIILVAKFPTRGKSKTRLMPALGEDGTLAIARALVSDALYSVGTAPELKAATKVLLFAPESSRSDFQRLLQDLGLDAATWVLIPIQQGDDLRSSDLGGKLAFGLKDARAVPSASFGGDGKMVAGLSRGAALFIGMDAPEVSPLQIAQALATARSRGSAYICPATDGGYTLLALPPGAPDTVFSGVRWSADDTCLSQMSQIASKGIPVLVGPTYDDIDDIHDLRGLSQRLRRQQLSCVPGELNESAPASTSRIFSALATVLPNDDPPGESGQKDSR 328
BLAST of mRNA_P-fluviatile_contig18.3275.1 vs. uniprot
Match: K0S136_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S136_THAOC) HSP 1 Score: 149 bits (377), Expect = 4.040e-36 Identity = 94/236 (39.83%), Postives = 132/236 (55.93%), Query Frame = 3
Query: 537 GKRATLVLVSKYPTPGSSKTRLIPAFGTMFAAQLAMAMLQDLLRRFAMEDTTREFRKVFVYAP--PSAGPAVHKMLEDLGLDK--------------SWDAEPV-SAGTALRESGLTTILEAALASARARERGA-VIFVGMDTPELPWSEVVAAKTSAEKEG--KAYICPASDGGYTLLGLPAAAARGTFEGVKWSDALTCKSQMRALASRGVLTRIGGTYHDVDEADDVAGLEKR 1184
G+ T+V+ +K P PGSSKTRL P G AA LA AML D+L D ++ K+ VYAP + G + K+L LGL +W P+ S + L S L L +L AR + G+ V+F+GMD+PE+P E+V +A + +AY+CPA+DGGY LL LP+ A F G++WS ALT SQ++AL+ G+ IG +D+DE +DV+ L KR
Sbjct: 2 GRNGTIVVFAKCPLPGSSKTRLAPLLGDDGAALLAQAMLSDVLSSLTACDHLQDTLKLLVYAPGDSNTGSRMTKILASLGLSSCSSESYTPRKDTTSNWVLMPMLSDSSDLTSSSLGDKLMDSLTRARELDEGSPVLFLGMDSPEVPTDEIVRGLETASSKDMPRAYMCPANDGGYGLLALPSCAPTSVFSGIRWSCALTAVSQLKALSDSGIDVSIGRLMYDIDEPEDVSSLAKR 237
BLAST of mRNA_P-fluviatile_contig18.3275.1 vs. uniprot
Match: A0A6S9DJ27_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DJ27_HETAK) HSP 1 Score: 141 bits (355), Expect = 1.860e-33 Identity = 82/211 (38.86%), Postives = 120/211 (56.87%), Query Frame = 3
Query: 549 TLVLVSKYPTPGSSKTRLIPAFGTMFAAQLAMAMLQDLLRRFAMEDTTREFRKVFVYAPPSAGPAVHKMLEDLGLDKSWDAEPVSAGTALRESGL-TTILEAALASARARERGAVIFVGMDTPELPWSEVVAAKTSAEKEGKAYICPASDGGYTLLGLPAAA-ARGTFEGVKWSDALTCKSQMRALASRGVLTRIGGTYHDVDEADDVAGL 1175
TL+ V+K+P+ G+SKTRLIP G A LA AM++DL+ +F+ ++ + KV +AP A L+ + + W P+ L+ L ++ A + GA FVGMDTP+LP + V A T + G+A++CPA+DGGY LLGLPA A A F GV+WS TC+ Q+RA+ + + G Y DVD+A+D+ L
Sbjct: 4 TLIFVTKWPSIGASKTRLIPDLGEEGAFLLAKAMVEDLIIKFSSSESLQNINKVLYFAPEEAKEDACSFLQQNDITEQWVLLPMIQSNELQSPDLGDKLVHAHNTCTQWFGPGATAFVGMDTPQLPAAAVARALTEG-RGGRAFVCPATDGGYVLLGLPAGAPAEACFRGVRWSADTTCEDQVRAINAASIEVVTGDIYTDVDDAEDMEAL 213
BLAST of mRNA_P-fluviatile_contig18.3275.1 vs. uniprot
Match: A0A7S3X3J9_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X3J9_9SPIT) HSP 1 Score: 134 bits (336), Expect = 6.320e-31 Identity = 95/232 (40.95%), Postives = 123/232 (53.02%), Query Frame = 3
Query: 549 TLVLVSKYPTPGSSKTRL----IPAFGTM----FAAQLAMAMLQDLLRRFAMEDTTREFRKVFVYAPPSAGPAVH--KMLEDLGLDKSWDAEPV-SAGTALRESGLTTILEAALASARARERGAVIFVGMDTPELPWSEVVAAKTSAEKEGKAYICPASDGGYTLLGLPA-AAARGTFEGVKWSDALTCKSQMRALASRGVLTRIGGTYHDVDEADDVAGLEKRSPRGLAES 1208
TLVL++K P P SKTRL +P G F A++ L DLL+RF+M+ R+V +YAPP+ H +L+ LG+ K+W PV S L IL A + +IF+GMD+P LP E+ A AYICPA DGGY LLGLPA A A F V WS + TC+SQ+ ALA G IG TY DVDEA+D+ + ++ R ES
Sbjct: 17 TLVLLAKRPGP-KSKTRLAVSLVPLLGPKAAQDFTTDFALSSLSDLLQRFSMDCD----RRVLLYAPPTDVSREHLSSLLDALGVAKAWTLLPVLETPEGSSSSDLGAILMDAAKRCPSASAPNLIFIGMDSPTLPSKELTKAAQVCSTSSHAYICPAVDGGYVLLGLPADAKAEVAFADVSWSASDTCESQVDALARAGCKCEIGPTYADVDEAEDLRTIGQQLLRESVES 243
BLAST of mRNA_P-fluviatile_contig18.3275.1 vs. uniprot
Match: A0A1Z5K6U4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6U4_FISSO) HSP 1 Score: 130 bits (328), Expect = 1.370e-28 Identity = 94/269 (34.94%), Postives = 132/269 (49.07%), Query Frame = 3
Query: 549 TLVLVSKYPTPGSSKTRLIPAFGTMFAAQLAMAMLQDLLRRFAMEDTTREFRKVFVYAPPS--AGPAVHKMLEDLGLDK----------------------------SW-----------------DAEPVSAGTA----LRESGLTTILEAALASARARER-----GAVIFVGMDTPELPWSEVVAAKTSAEKEGKAYICPASDGGYTLLGLPA-AAARGTFEGVKWSDALTCKSQMRALASRGVLTRIGGTYHDVDEADDVAGLEKR 1184
++V+V+K P PG SKTRLIP G +AQLA AML D+L +T + F ++ +YAPP+ + +L+ G+ + SW + +P+ ++ L+ S L+ ILE AL R R R G VIFVGMDTP++P E+ A E +A +CP++DGGY LL +P A A F GV+WSD LT SQ++AL V +G +DVDE DDV L +R
Sbjct: 10 SVVVVAKCPIPGRSKTRLIPLTGVDGSAQLATAMLADVLTALTQAETEKNFDRILLYAPPTDVGKLTMENLLDRFGIPRQRTDDNDASEVMSTKSYKSSKSDRKHTQSWNPDAWTLLPMSNEKLNSEGDPIDHSSSKPLNLKSSYLSDILENALHRVRLRLRKLKSDGPVIFVGMDTPDIPLDELAYA---LEDYKRARVCPSADGGYGLLSVPHHAPAERIFAGVRWSDPLTLASQLKALTDEDVRVTVGRVMYDVDEPDDVVQLVER 275
BLAST of mRNA_P-fluviatile_contig18.3275.1 vs. uniprot
Match: R1D0W7_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D0W7_EMIHU) HSP 1 Score: 127 bits (318), Expect = 3.200e-28 Identity = 93/267 (34.83%), Postives = 132/267 (49.44%), Query Frame = 3
Query: 522 TANGTGKRATLVLVSKYPTPGSSKTRLIPAFGTMFA---------AQLAMAMLQDLLRRFAMEDTTRE--FRKVFVYAPPS--AGPAVHKMLEDLGLDKSWDAEPVSAGTALRESGLTTIL-EAALASARARERGAVIFVGMDTPELPWSEVVAAKTSAEKEGKAYICPASDGGYTLLGLPAAA-ARGTFEGVKWSDALTCKSQMRALASRGVLTRIGGTYHDVDEADDVAGLEKR-SPRGLAESPCPQTLGVARAALQLLPRVWVG 1274
T +G + LVL++KYP G SKTRL A A A DLL+RFA ++ F YAPP+ A +L++ ++ W +PV + ++ S L IL +A + AR V F+G+D P+LP ++AA +++ G A +CPASDGGYTLL LP A R F V+WS TC SQ++AL G+ + + T+ DVDE D+ L R + + S CP T + A P V G
Sbjct: 28 TNSGPQRATALVLLAKYPGAGKSKTRLAAQLRPFCASDDAVQAIIANFVRAATLDLLQRFAAATASQGGGFECFLTYAPPTEEARSWFASLLQEGRVEDRWRLQPVLSSSSAASSSLGDILCDAGQRARAARGCARVSFLGVDCPDLPLEALLAAASASSAPGVAAVCPASDGGYTLLALPEGADERLCFSDVRWSAGDTCLSQLQALTRAGLTSAVLETHSDVDELPDLRALWARLAGEPDSTSQCPHTRAMLAALATSAPAVLCG 294
BLAST of mRNA_P-fluviatile_contig18.3275.1 vs. uniprot
Match: A0A7S4QW63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QW63_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.370e-27 Identity = 91/241 (37.76%), Postives = 124/241 (51.45%), Query Frame = 3
Query: 552 LVLVSKYPTPGSSKTRLIPAFGTMFAAQLAMAMLQDLLRRFAMEDTTREFRKVFVYAPPSAGPAVHKM--LEDLGLD------------------KSWDAEPVSAGTALRESGLTTILEAAL---------ASARARERGAVIFVGMDTPELPWSEVVAAKTSAEKEGKAYICPASDGGYTLLGLPAAAARGT-FEGVKWSDALTCKSQMRALASRGVLTRIGGTYHDVDEADDVAGLEKR 1184
+VLV+K P PG SKTRL P G+ AA LA AML D+L + KV +YAP + H + L+DLGL + W P+ T+L+ S L L L S+ + E G V+F+GMD+PELP E+ A + + KA++CPA+DGGY +L +P+ A T FE V+WS LT SQ++AL GV +G D+DE +DV GL R
Sbjct: 7 IVLVAKCPIPGKSKTRLTPLLGSDGAASLARAMLSDILVTL-LSSFPENVLKVLLYAPGNEEGEAHMVDILKDLGLPYTTXXXXXXXXXXXXDVYQRWILLPMVNDTSLQSSDLGGKLSNGLNRVRTLQSKLSSSSNENGDVVFLGMDSPELPLHEISHALQISSQ--KAHLCPANDGGYGMLCVPSHAPCPTIFEHVQWSTHLTAVSQLKALTDCGVEVSLGKLMFDIDEMEDVRGLAGR 244 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3275.1 >prot_P-fluviatile_contig18.3275.1 ID=prot_P-fluviatile_contig18.3275.1|Name=mRNA_P-fluviatile_contig18.3275.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=355bp MMVAPQNLSFYLLRSTNTAWSPIFSVKSPRQAHLTLHPKSYSHPLYSTYIback to top mRNA from alignment at P-fluviatile_contig18:1684357..1693272- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig18.3275.1 ID=mRNA_P-fluviatile_contig18.3275.1|Name=mRNA_P-fluviatile_contig18.3275.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8916bp|location=Sequence derived from alignment at P-fluviatile_contig18:1684357..1693272- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig18:1684357..1693272- >mRNA_P-fluviatile_contig18.3275.1 ID=mRNA_P-fluviatile_contig18.3275.1|Name=mRNA_P-fluviatile_contig18.3275.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2130bp|location=Sequence derived from alignment at P-fluviatile_contig18:1684357..1693272- (Porterinema fluviatile SAG_2381)back to top |