mRNA_P-fluviatile_contig18.3252.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig18.3252.1
Unique NamemRNA_P-fluviatile_contig18.3252.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig18.3252.1 vs. uniprot
Match: D8LF71_ECTSI (MI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF71_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 6.660e-93
Identity = 158/169 (93.49%), Postives = 162/169 (95.86%), Query Frame = 3
Query:   75 SAGEKDSEAGRLLALAARQRMNTDVRRSVFVAIVGSSDCEDALEKILRLNLRGAQEREIARVIVECCSQEVSYNPFYAHLAERVCDRQPKLRFTFQVAFWDALKTLDDGAARRAGSLARLMAHLVIRKQLSLTVLKTVDVQDLSPSGLLLMRVFFHEIIAAGDDASFME 581
            S G  DSEA  LLALAARQRMNTDVRRSVFVAIVGSSDCEDA EKILRLNL+GAQEREIARVIVECCSQE SYNPFYAHLAERVCDRQPKLRFTFQVAFWDALKTLDDGAARRAGSLARLMAHLV+RKQLSLTVLKTVDVQ+LSPSGLLLMRVFFHEIIAAGDDA+FME
Sbjct:  660 SGGANDSEAVGLLALAARQRMNTDVRRSVFVAIVGSSDCEDAFEKILRLNLKGAQEREIARVIVECCSQEGSYNPFYAHLAERVCDRQPKLRFTFQVAFWDALKTLDDGAARRAGSLARLMAHLVVRKQLSLTVLKTVDVQELSPSGLLLMRVFFHEIIAAGDDAAFME 828          
BLAST of mRNA_P-fluviatile_contig18.3252.1 vs. uniprot
Match: A0A835YM02_9STRA (MI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM02_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.490e-60
Identity = 116/241 (48.13%), Postives = 164/241 (68.05%), Query Frame = 3
Query:   84 EKDSEAGRLLALAARQRMNTDVRRSVFVAIVGSSDCEDALEKILRLNLRGAQERE-------IARVIVECCSQEVSYNPFYAHLAERVCDRQPKLRFTFQVAFWDALKTLDDGAARRAGSLARLMAHLVIRKQLSLTVLKTVDVQDLSPSGLLLMRVFFHEIIAAGDDASFMEIFRRLVRPAGAKEGGGHSAARDNALVFLRGRLGPAPAGWDRGRRKAFRKRVKGACRLIEAIA--TADE 779
            ++D +  RL  LA+ QRMNTDVRR+VF AI+G++D EDA E+++RL+LRG Q+RE       + RV+V+CC QE +YNP+YA L  R+C+   K +FTFQ+AFWDA K  DD  ARRA +LARL+AHLV+ K LS+ V+KT+ V+ L  SG L +RV F  + +  +D++F+ +F+RL    GA    G   AR+  LV L+  +G AP  W + RRKA +KR+K   +L++A+A  T DE
Sbjct:  601 DEDDDVSRLAQLASHQRMNTDVRRAVFCAIMGAADFEDAFERLMRLDLRGQQDREDPQQLRKVVRVLVDCCGQEKAYNPYYALLGARLCEFDTKYKFTFQLAFWDAFKQFDDMPARRAANLARLLAHLVLHKHLSIGVVKTIQVEALPASGGLFLRVLFVTVFSEPNDSTFLGVFQRLAGTKGASTDQG--MARETVLVLLQRYMGAAPEEWPKPRRKAHKKRLKTITQLLDALAVPTFDE 839          
BLAST of mRNA_P-fluviatile_contig18.3252.1 vs. uniprot
Match: A0A7S3VEI5_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VEI5_9STRA)

HSP 1 Score: 177 bits (449), Expect = 8.220e-46
Identity = 100/243 (41.15%), Postives = 149/243 (61.32%), Query Frame = 3
Query:   84 EKDSEAGRLLALAARQRMNTDVRRSVFVAIVGSSDCEDALEKILRLN-LRGAQEREIARVIVECCSQEVSYNPFYAHLAERVCDRQPKLRFTFQVAFWDALKTLDDGAARRAGSLARLMAHLVIRKQLSLTVLKTVDVQ--DLSPSGLLLMRVFFHEIIAAGDDAS-FMEIFRR-------LVRPAGAKE-------GGGHSAARDNALVFLRGRLGPAPAGWDRGRRKAFRKRVKGACRLIE 758
            +K  +  RLL LA +QRMNTD+RRS+F  ++GS DC+DA EK++R   LRG  ERE+ RV+V CC QE  YNP+Y+HLA+R+C  Q K +FTFQ+A WD+ K  +D  AR+A +LA+L+AHL++  QL+L VLK +D+   D+S + ++ + +FF  I  + +D    + +FRR       L + A   E       G   +A ++N  VFL   L  +P      ++  FRK +K A ++ E
Sbjct:  709 KKSPKQDRLLKLATKQRMNTDLRRSIFCIVMGSDDCQDAFEKLIRAGTLRGKSEREVVRVLVHCCGQEKVYNPYYSHLAKRLCSYQNKCKFTFQLALWDSFKQFEDMKARKAANLAKLLAHLIMNHQLNLNVLKVIDISPNDMSEASVIFLTIFFSSIFDSYEDPQDIVVLFRRGEKSQVQLQKEAAEIEKDDLYDGGDDRAALKENMSVFLIHYLEKSPKNV---KKSTFRKNLKTAIKICE 948          
BLAST of mRNA_P-fluviatile_contig18.3252.1 vs. uniprot
Match: A0A5D6Y3G9_9STRA (MI domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3G9_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.090e-44
Identity = 96/232 (41.38%), Postives = 139/232 (59.91%), Query Frame = 3
Query:   81 GEKDSEAGRLLALAARQRMNTDVRRSVFVAIVGSSDCEDALEKILRLNLRGAQEREIARVIVECCSQEVSYNPFYAHLAERVCDRQPKLRFTFQVAFWDALKTLDDGAARRAGSLARLMAHLVIRKQLSLTVLKTVDVQDLSPSGLLLMRVFFHEIIAAGDDASFMEIFRRLVRPAGAKEGGGHSAARDNALVFLRGRLGPAPAGWDRGRRKAFRKRVKGACRLIEAIATAD 776
            G++  E  RLL LA +QRMNTDVRR +FVAI+G+SDC DA E++LRL+L+  QEREI RV++ C   E  +N FY  LA+++C+  P+ +FTFQ+AFWDA K LD  A R+  +LA+L+A L + K LSL+VLK +D   LS   +L +RV    I+    +    ++F RL++   A+         D   VFL   L    +  D   R   +KR +  C L++ ++  D
Sbjct:  703 GQERDEEDRLLRLAEKQRMNTDVRRQIFVAIMGASDCVDAYERLLRLHLKEKQEREIVRVLLHCAGHEQQFNKFYLVLADKLCEMDPRYKFTFQLAFWDAFKQLDTFAPRKLYNLAQLLAGLAVSKALSLSVLKVLDFTALSAKTVLFLRVALERILRLDTELEVAQVFERLLQTKKAQ------VTLDGLAVFLHQHLTSFRSEEDVAARALLKKRSRHVCSLLDHLSKDD 928          
BLAST of mRNA_P-fluviatile_contig18.3252.1 vs. uniprot
Match: A0A6G0X9M9_9STRA (MI domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9M9_9STRA)

HSP 1 Score: 172 bits (436), Expect = 3.030e-44
Identity = 96/219 (43.84%), Postives = 135/219 (61.64%), Query Frame = 3
Query:  108 LLALAARQRMNTDVRRSVFVAIVGSSDCEDALEKILRLNLRGAQEREIARVIVECCSQEVSYNPFYAHLAERVCDRQPKLRFTFQVAFWDALKTLDDGAARRAGSLARLMAHLVIRKQLSLTVLKTVDVQDLSPSGLLLMRVFFHEIIAAGDDASFMEIFRRLVRPAGAKEGGGHSAARDNALVFLRGRLGPAPAGWDRGRRKAFRKRVKGACRLIEAI 764
            LL LA +QRMNTDVRRS+F AI+G+SDC +A + +L+L L+  QEREI RVI+ CC QE  YNP+YA LA +     PK +FT Q+A+WD  K + +  +R+  +L  L+A L+    +SL+ LK +D  DLSPS +LL++V F  I+   DD + MEIF RL     ++     SA RD   VFL   +  A     +G+      RVK A R++E++
Sbjct:  610 LLRLAEKQRMNTDVRRSIFCAIMGASDCIEAYDAVLKLGLKDKQEREIIRVIIHCCGQEAKYNPYYALLASKFAASDPKFKFTLQLAYWDCFKQMSEWKSRKVYNLGCLLASLLEDGSMSLSCLKVLDFTDLSPSAVLLLKVTFERILLIDDDNALMEIFERL-----SQHNTQVSATRDGITVFLHQHMINAKLKDPKGK-----TRVKKAIRMLESM 818          
BLAST of mRNA_P-fluviatile_contig18.3252.1 vs. uniprot
Match: A0A067CR09_SAPPC (MI domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CR09_SAPPC)

HSP 1 Score: 172 bits (435), Expect = 4.490e-44
Identity = 93/231 (40.26%), Postives = 140/231 (60.61%), Query Frame = 3
Query:   72 TSAGEKDSEAGRLLALAARQRMNTDVRRSVFVAIVGSSDCEDALEKILRLNLRGAQEREIARVIVECCSQEVSYNPFYAHLAERVCDRQPKLRFTFQVAFWDALKTLDDGAARRAGSLARLMAHLVIRKQLSLTVLKTVDVQDLSPSGLLLMRVFFHEIIAAGDDASFMEIFRRLVRPAGAKEGGGHSAARDNALVFLRGRLGPAPAGWDRGRRKAFRKRVKGACRLIEAI 764
            ++AG KD++   LL LA +QRMNTDVRRS+F AI+G+SDC +A E +L+L L+  QEREI RV++ CC  E  YNP+YA LAE+     P+ +FT Q+A+WD  K LD+   R+  ++A L+A L+    ++L VLK +D  DLS + +L +RV F  I++  DD++ + +F R+ +     E     A RD   VF    L PA    +       +K+ K   R+++A+
Sbjct:  617 SAAGGKDAQQNALLKLAEKQRMNTDVRRSIFCAIMGASDCIEAYEGVLKLGLKDKQEREIIRVLMHCCGNEAKYNPYYALLAEKFATADPRYKFTLQLAYWDVFKQLDEWKPRKVYNMACLLAKLLETGAMTLAVLKVLDFTDLSDATVLFLRVAFERILSIADDSALIGVFERIAQQKSKME-----ATRDGVAVFFHQHLLPALKTLE------AKKKAKMVTRMLDAM 836          
BLAST of mRNA_P-fluviatile_contig18.3252.1 vs. uniprot
Match: K3X0S8_GLOUD (MI domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0S8_GLOUD)

HSP 1 Score: 166 bits (419), Expect = 6.510e-43
Identity = 91/228 (39.91%), Postives = 138/228 (60.53%), Query Frame = 3
Query:   84 EKDSEAGRLLALAARQRMNTDVRRSVFVAIVGSSDCEDALEKILRLNLRGAQEREIARVIVECCSQEVSYNPFYAHLAERVCDRQPKLRFTFQVAFWDALKTLDDGAARRAGSLARLMAHLVIRKQLSLTVLKTVDVQDLSPSGLLLMRVFFHEIIAAGDDASFMEIFRRLVRPAGAKEGGGHSAARDNALVFLRGRLGPAPAGWDRGRRKAFRKRVKGACRLIEAIA 767
            E+D E  RL+ LA +QRMNTDVR+ +FVAI+G+SDC DA E++L+L+L+  QEREI RV++ C  QE  +N +Y  LA+++C+  P+ +FTFQ+AFWD  K  D    R+  +LA+++A L+I K LSL+ LK +D  DL    +L MRV   +I+   D+    ++F+RL++   A+         D   VF+   L    +  D   R   +KR K    L++ +A
Sbjct:  326 ERDEE-NRLVKLAEKQRMNTDVRKKIFVAIMGASDCLDAYERLLQLHLKEKQEREIVRVLLHCSGQEKKFNKYYLVLADKLCEMDPRYKFTFQLAFWDIFKQFDTFKPRKLYNLAQMLAGLIISKSLSLSCLKVLDFTDLPEKSILFMRVVLEKILKLEDELEMAQVFQRLLQTKKAQ------LTIDGLAVFVHQHLTNFHSEEDAAVRALLKKRSKSVKSLLDHLA 546          
BLAST of mRNA_P-fluviatile_contig18.3252.1 vs. uniprot
Match: A0A7S1FNP7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNP7_9STRA)

HSP 1 Score: 155 bits (393), Expect = 5.830e-42
Identity = 91/224 (40.62%), Postives = 132/224 (58.93%), Query Frame = 3
Query:  108 LLALAARQRMNTDVRRSVFVAIVGSSDCEDALEKILRLNLRGAQEREIARVIVECCSQEVSYNPFYAHLAERVCDRQPKLRFTFQVAFWDALKTLDDGAARRAGSLARLMAHLVIRKQLSLTVLKTVDV--QDLSPSGLLLMRVFFHEIIAAGDDASFMEIFRRLVRPAGAKEGGGHSAARDNALVFLRGRLGPAPAGWDRGRRKAFRKRVKGACRLIEAIATA 773
            LL LAARQRMNTD+RRS+F  ++GS DCEDA  K+ +LNLRG QEREI RV+V+CC QE  YNPFYA +A+R  +  P ++FT +  +WD LK ++   ARRA +LA+L+  LV     SL +L+T+++    L    ++ + VFF +++   D      IF +  R    KE GG S    +  VFL   +  +P      +   FR R+K   ++ +  + A
Sbjct:   30 LLHLAARQRMNTDLRRSIFCILMGSVDCEDAFVKLTKLNLRGKQEREILRVLVDCCGQEAVYNPFYALVAKRALEAHPSMKFTVRTVYWDVLKQMEGMKARRAANLAKLLGALVREGSASLDILRTLEMGLTSLPEEAVIFLTVFFSDLLEHCDVKDLENIFGKAQR----KEDGG-SELCTSMSVFLMNYVKKSPKNIKHSK---FRARLKAILKVCKPSSDA 245          
BLAST of mRNA_P-fluviatile_contig18.3252.1 vs. uniprot
Match: A0A7S4MUB1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MUB1_9STRA)

HSP 1 Score: 165 bits (417), Expect = 8.020e-42
Identity = 91/197 (46.19%), Postives = 130/197 (65.99%), Query Frame = 3
Query:   75 SAGEKDSEAGRLLALAARQRMNTDVRRSVFVAIVGSSDCEDALEKILRLN-LRGAQEREIARVIVECCSQEVSYNPFYAHLAERVCDRQPKLRFTFQVAFWDALKTLDDGAARRAGSLARLMAHLVIRKQ--LSLTVLKTVDV--QDLSPSGLLLMRVFFHEIIAAGDDA-SFMEIFRRLVRPAGA---KEGGGHSA 638
            S GE++ +  RLLALA++QRMNTD RRS+F  ++GS DCEDA EK++R   LRG  ER+  RV+++CC QE SYNP+YAHL  R+C  QP+ +FTFQ+AFWDA K  +   ARRA +LA+L+AHLV   +  L + +LK ++V  + +  S ++ + +FF  +  + DD      +FRR +   G    K GGG S+
Sbjct:  544 SGGEREED--RLLALASKQRMNTDARRSIFCVVMGSMDCEDAFEKLVRGGMLRGKSERDAVRVLMDCCGQEKSYNPYYAHLGVRLCQYQPQSKFTFQLAFWDAFKQFETMKARRAANLAKLLAHLVGTAENCLGMQILKVIEVTPEGMPESAVIFLTIFFTNLFESSDDPFRVTALFRRALALRGKTANKSGGGSSS 738          
BLAST of mRNA_P-fluviatile_contig18.3252.1 vs. uniprot
Match: A0A1V9ZL45_9STRA (MI domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZL45_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.740e-40
Identity = 81/195 (41.54%), Postives = 120/195 (61.54%), Query Frame = 3
Query:   81 GEKDSEAGRLLALAARQRMNTDVRRSVFVAIVGSSDCEDALEKILRLNLRGAQEREIARVIVECCSQEVSYNPFYAHLAERVCDRQPKLRFTFQVAFWDALKTLDDGAARRAGSLARLMAHLVIRKQLSLTVLKTVDVQDLSPSGLLLMRVFFHEIIAAGDDASFMEIFRRLVRPAGAKEGGGHSAARDNALVFL 665
            G+ D++  +LL LA +QRMNTDVRRS+F AI+G+SDC +A + +L+L L+  QEREI RVI+ CC  E  YNP+YA L E+     P+ +FT Q+A+WD  K +++  AR+  ++A  +A L+    ++L VLK +D  DL  S +L +RV F  +++   D+  +EIF R+       E     A RD   VF 
Sbjct:  431 GKDDAQYNKLLKLAEKQRMNTDVRRSIFCAIMGASDCVEAYDAVLKLGLKDKQEREIIRVIMHCCGNEAKYNPYYALLTEKFAVSDPRYKFTLQLAYWDIFKQVEEWKARKVYNMACFLAKLLQTGAMTLAVLKVLDFTDLGTSTILFLRVVFERLLSIEKDSELIEIFERIAHQKSKME-----ATRDGIAVFF 620          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF71_ECTSI6.660e-9393.49MI domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835YM02_9STRA1.490e-6048.13MI domain-containing protein n=1 Tax=Tribonema min... [more]
A0A7S3VEI5_9STRA8.220e-4641.15Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A5D6Y3G9_9STRA1.090e-4441.38MI domain-containing protein (Fragment) n=1 Tax=Py... [more]
A0A6G0X9M9_9STRA3.030e-4443.84MI domain-containing protein n=2 Tax=Aphanomyces e... [more]
A0A067CR09_SAPPC4.490e-4440.26MI domain-containing protein n=2 Tax=Saprolegnia T... [more]
K3X0S8_GLOUD6.510e-4339.91MI domain-containing protein n=1 Tax=Globisporangi... [more]
A0A7S1FNP7_9STRA5.830e-4240.63Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S4MUB1_9STRA8.020e-4246.19Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
A0A1V9ZL45_9STRA1.740e-4041.54MI domain-containing protein n=1 Tax=Thraustotheca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig18contigP-fluviatile_contig18:1481349..1483811 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score283.5
Seed ortholog evalue8.4e-74
Seed eggNOG ortholog2880.D8LF71
Preferred nameNOM1
KEGG koko:K17583
GOsGO:0000003,GO:0000151,GO:0001942,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005677,GO:0005730,GO:0005737,GO:0006139,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006349,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0006972,GO:0006996,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008283,GO:0008544,GO:0009507,GO:0009536,GO:0009555,GO:0009628,GO:0009790,GO:0009791,GO:0009793,GO:0009888,GO:0009909,GO:0009987,GO:0010026,GO:0010154,GO:0010214,GO:0010468,GO:0016043,GO:0017053,GO:0019219,GO:0019222,GO:0021700,GO:0022008,GO:0022404,GO:0022405,GO:0022414,GO:0022607,GO:0022613,GO:0030154,GO:0031323,GO:0031461,GO:0031497,GO:0031507,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0040029,GO:0042254,GO:0042274,GO:0042303,GO:0042633,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043588,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045787,GO:0046483,GO:0048229,GO:0048316,GO:0048366,GO:0048367,GO:0048513,GO:0048518,GO:0048522,GO:0048580,GO:0048608,GO:0048731,GO:0048820,GO:0048827,GO:0048831,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051239,GO:0051276,GO:0051726,GO:0060255,GO:0060429,GO:0061458,GO:0065007,GO:0070013,GO:0070828,GO:0071103,GO:0071514,GO:0071695,GO:0071704,GO:0071840,GO:0080008,GO:0080090,GO:0090558,GO:0090568,GO:0097078,GO:0097159,GO:0098773,GO:0099402,GO:1901360,GO:1901363,GO:1902494,GO:1990234,GO:2000026,GO:2000241,GO:2000653
EggNOG free text desc.hair follicle maturation
EggNOG OGsKOG2141@1,KOG2141@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Hectar predicted targeting categoryother localisation
Exons4
Model size1055
Cds size654
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig18.3252.1prot_P-fluviatile_contig18.3252.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig18 1481616..1483677 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815766.1394107-UTR-P-fluviatile_contig18:1481348..14816151622815766.1394107-UTR-P-fluviatile_contig18:1481348..1481615Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1481349..1481615 -
1693563261.4479814-UTR-P-fluviatile_contig18:1481348..14816151693563261.4479814-UTR-P-fluviatile_contig18:1481348..1481615Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1481349..1481615 -
1622815766.2068508-UTR-P-fluviatile_contig18:1483677..14838111622815766.2068508-UTR-P-fluviatile_contig18:1483677..1483811Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1483678..1483811 -
1693563261.4915442-UTR-P-fluviatile_contig18:1483677..14838111693563261.4915442-UTR-P-fluviatile_contig18:1483677..1483811Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1483678..1483811 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815766.152023-CDS-P-fluviatile_contig18:1481615..14818221622815766.152023-CDS-P-fluviatile_contig18:1481615..1481822Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1481616..1481822 -
1693563261.4577742-CDS-P-fluviatile_contig18:1481615..14818221693563261.4577742-CDS-P-fluviatile_contig18:1481615..1481822Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1481616..1481822 -
1622815766.1687307-CDS-P-fluviatile_contig18:1482509..14826081622815766.1687307-CDS-P-fluviatile_contig18:1482509..1482608Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1482510..1482608 -
1693563261.4656532-CDS-P-fluviatile_contig18:1482509..14826081693563261.4656532-CDS-P-fluviatile_contig18:1482509..1482608Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1482510..1482608 -
1622815766.1827264-CDS-P-fluviatile_contig18:1483010..14831431622815766.1827264-CDS-P-fluviatile_contig18:1483010..1483143Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1483011..1483143 -
1693563261.4735773-CDS-P-fluviatile_contig18:1483010..14831431693563261.4735773-CDS-P-fluviatile_contig18:1483010..1483143Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1483011..1483143 -
1622815766.195078-CDS-P-fluviatile_contig18:1483462..14836771622815766.195078-CDS-P-fluviatile_contig18:1483462..1483677Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1483463..1483677 -
1693563261.481501-CDS-P-fluviatile_contig18:1483462..14836771693563261.481501-CDS-P-fluviatile_contig18:1483462..1483677Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1483463..1483677 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig18.3252.1

>prot_P-fluviatile_contig18.3252.1 ID=prot_P-fluviatile_contig18.3252.1|Name=mRNA_P-fluviatile_contig18.3252.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=218bp
MNTDVRRSVFVAIVGSSDCEDALEKILRLNLRGAQEREIARVIVECCSQE
VSYNPFYAHLAERVCDRQPKLRFTFQVAFWDALKTLDDGAARRAGSLARL
MAHLVIRKQLSLTVLKTVDVQDLSPSGLLLMRVFFHEIIAAGDDASFMEI
FRRLVRPAGAKEGGGHSAARDNALVFLRGRLGPAPAGWDRGRRKAFRKRV
KGACRLIEAIATADELG*
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mRNA from alignment at P-fluviatile_contig18:1481349..1483811-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig18.3252.1 ID=mRNA_P-fluviatile_contig18.3252.1|Name=mRNA_P-fluviatile_contig18.3252.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2463bp|location=Sequence derived from alignment at P-fluviatile_contig18:1481349..1483811- (Porterinema fluviatile SAG_2381)
CGGCTGCAGGCTTGACGGCTGGCGAAGCGGCGGCGGCGAAGGGCGGCAGT GATACAGGCGGCGTCGGCGGAACATCCGCCGGCGAGAAGGACAGCGAGGC GGGCCGGCTCCTAGCCCTCGCGGCGCGGCAGCGCATGAACACCGACGTCC GGCGGTCCGTGTTCGTGGCGATCGTCGGCAGCTCGGACTGCGAGGACGCC CTCGAGAAGATCCTCAGGCTCAACCTCAGGGGGGCGCAGGAGAGGGAGAT CGCCAGGGTCATCGTCGAGTGCTGCAGCCAGGAGGTCTCTTACAACCCGT TCTACGCCCACTTGGCGGAGCGCGTTTGCGATCGACAGCCGAAGCTCAGG TAGGGTTGATTCTGGAAATAGAGACCGAGGGGAAGCGCGGGGCGGAGCTA GCTCGAGCAGCTCGATGCCGGGACATCCTGTTTTACCCTTGTGCCATTCG TTTGTTTGGGTCCTTCGCTCTTGAAGTAGCGCGTGCCAATTTCATCCAAG GTTTAGTCGTGCCCTAACTCGAGATCCCTCCGTTTTGGCGAACATCCGTT TGCTCACGTGCGAGGGGCGTGCGCTTGAAGCGGCGGATTGCCGAAAGACG AGCACCGACCCACGGTCAATCTCGCTGTCTTCTCCCCCTCCCCTCTCCGC CCCCCTCCGTCAAAAAAGGTTCACCTTTCAGGTGGCGTTCTGGGACGCGC TCAAGACTCTCGACGACGGTGCTGCGCGACGGGCGGGTAGCCTGGCGCGC CTTATGGCCCACCTCGTCATCCGCAAGCAGCTATCCCTGACAGTACTCAA GGTGTGCGTTCTGAACACTCAGCCAAGTTGTCCGGAGTTTTGTGTGCCAT TGCCTCTGCCGGCGGTCAATGCCACACCCGCGATAAGACAACAGTGGAAA TCCCGCTTCGATTGCTGCTGCGTTTCTTTGAAACCTCCAATGCGCCCATC GACGCCTGTTTGTAGGTATGGTCGCGTTGAAATTTCCCGATCAGGTGAGA GGAAGAATGTCGGAGGTCTCCTGGCATTCGGGCAGGTAAGCAGCCTTGCT ATCCTAAGTTCCGCTCAGCCTTTCCCACTTTTTTTCACTTTCCAGTACCT CGGAACCGTCTGACTCCTTGCCTATTTTCCTGATCATCTTGACAGCCTTT CCCCGATTTCTTCCCGTTCGTGCGCGTTGATTTCGCTGTGTTCCGGGTGC CAGACGGTTGATGTTCAAGACCTCTCGCCAAGCGGGCTTCTGCTCATGAG AGTCTTCTTCCACGAGATCATCGCAGCGGGCGACGATGCTTCCTTCATGG AGGTAAGTTTTGCCCTCCCATGTCCATCGCTTCCTGTCAGACGCCCCGCT GTTGTCGCCAGTGATTCAAGATGCTCGCTGATATTGACATCGTGGAAAGC AGTGCGACCTTTTGACGGCATGTGCTATCTACAGATGGAGGCTAGCCCAA GCTTGTCTGACGAGGAGTGGTTTCCTGATGTCGCCTTGTTGGCACCTCGT CAAAGTTGTAGCAGAAGCATGGGATTGAGAAGTGTTGGACGGCGGTGGCG CGGGTGGGGAGGAGGGAAGAAGGCAAACTGGCTTGAAATATTGAAATTGA AATTTTGCGCCCTCCGGATCATATGTTTTTGTTTCGTGTCTGCGGAAAGA AGAACGGTGAGCTGTGTGTTCAGCGGTCTCCACGCGAAGTGCTAGCCGTG GCATATCGACCGCAACATCCACTACATGACCCAAGCGCAAGATACAGAGC CGTTTGGGCACAGCAGCTCCCGGCTCTGGACGTGGGTACACGTCTTCGCA ACACTCATTGCGCAGGACACAGCAGCAGTCGGAGCGGGGGCAAGCGCAAT GTTCGATACTCCGTACGTACGGACTCAACGATACCTTGAAAGCCGCAGTG AATTTTCCGCAAAATATCGGTTTTCAGCAAACCATCGGCTTCGCACCGCG CTCTGCCCTCTGCCTCTGTCCCTCGCCACCATGTCAAAGATATTCCGCCG CCTCGTGCGACCGGCGGGGGCGAAAGAGGGCGGGGGGCACTCCGCCGCGA GGGACAACGCCCTGGTGTTTTTGAGGGGGCGACTGGGGCCCGCCCCCGCT GGCTGGGACCGCGGCAGACGAAAGGCTTTTCGCAAGAGGGTGAAGGGGGC GTGCCGGTTGATCGAGGCCATCGCCACCGCCGACGAGCTCGGGTGACCGG GTTACCGAGCCGATGCGGGTACTTCGGTCGTTCCGCCGCGGTCGCTCTTT TGTTGGTGTGTGCTGTTTAGAGGTGCTGCGGGGTTTTGCTGCCCAGCCGA ATCTCCTCTTTTGTTTTTGACAAGAAGTCCGTTCGGTTCGAGTTGAAGAA GAGAGCATGTTCAATTCTGCGTTTATTGTTAGCCGCAGCAGTGCTGCCCA CAGTTTTGGGGTTCAAACTTTTTCATTCTTGGAATGCTGGGAAGGAACCC ACAACATTTGTGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig18:1481349..1483811-

>mRNA_P-fluviatile_contig18.3252.1 ID=mRNA_P-fluviatile_contig18.3252.1|Name=mRNA_P-fluviatile_contig18.3252.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1308bp|location=Sequence derived from alignment at P-fluviatile_contig18:1481349..1483811- (Porterinema fluviatile SAG_2381)
ATGAACACCGACGTCCGGCGGTCCGTGTTCGTGGCGATCGTCGGCAGCTC
GGACTGCGAGGACGCCCTCGAGAAGATCCTCAGGCTCAACCTCAGGGGGG
CGCAGGAGAGGGAGATCGCCAGGGTCATCGTCGAGTGCTGCAGCCAGGAG
GTCTCTTACAACCCGTTCTACGCCCACTTGGCGGAGCGCGTTTGCGATCG
ACAGCCGAAGCTCAGATGAACACCGACGTCCGGCGGTCCGTGTTCGTGGC
GATCGTCGGCAGCTCGGACTGCGAGGACGCCCTCGAGAAGATCCTCAGGC
TCAACCTCAGGGGGGCGCAGGAGAGGGAGATCGCCAGGGTCATCGTCGAG
TGCTGCAGCCAGGAGGTCTCTTACAACCCGTTCTACGCCCACTTGGCGGA
GCGCGTTTGCGATCGACAGCCGAAGCTCAGGTTCACCTTTCAGGTGGCGT
TCTGGGACGCGCTCAAGACTCTCGACGACGGTGCTGCGCGACGGGCGGGT
AGCCTGGCGCGCCTTATGGCCCACCTCGTCATCCGCAAGCAGCTATCCCT
GACAGTACTCAAGGTTCACCTTTCAGGTGGCGTTCTGGGACGCGCTCAAG
ACTCTCGACGACGGTGCTGCGCGACGGGCGGGTAGCCTGGCGCGCCTTAT
GGCCCACCTCGTCATCCGCAAGCAGCTATCCCTGACAGTACTCAAGACGG
TTGATGTTCAAGACCTCTCGCCAAGCGGGCTTCTGCTCATGAGAGTCTTC
TTCCACGAGATCATCGCAGCGGGCGACGATGCTTCCTTCATGGAGACGGT
TGATGTTCAAGACCTCTCGCCAAGCGGGCTTCTGCTCATGAGAGTCTTCT
TCCACGAGATCATCGCAGCGGGCGACGATGCTTCCTTCATGGAGATATTC
CGCCGCCTCGTGCGACCGGCGGGGGCGAAAGAGGGCGGGGGGCACTCCGC
CGCGAGGGACAACGCCCTGGTGTTTTTGAGGGGGCGACTGGGGCCCGCCC
CCGCTGGCTGGGACCGCGGCAGACGAAAGGCTTTTCGCAAGAGGGTGAAG
GGGGCGTGCCGGTTGATCGAGGCCATCGCCACCGCCGACGAGCTCGGGTG
AATATTCCGCCGCCTCGTGCGACCGGCGGGGGCGAAAGAGGGCGGGGGGC
ACTCCGCCGCGAGGGACAACGCCCTGGTGTTTTTGAGGGGGCGACTGGGG
CCCGCCCCCGCTGGCTGGGACCGCGGCAGACGAAAGGCTTTTCGCAAGAG
GGTGAAGGGGGCGTGCCGGTTGATCGAGGCCATCGCCACCGCCGACGAGC
TCGGGTGA
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