mRNA_P-fluviatile_contig18.3228.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig18.3228.1
Unique NamemRNA_P-fluviatile_contig18.3228.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig18.3228.1 vs. uniprot
Match: D8LF51_ECTSI (Eukaryotic translation initiation factor 3 k subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF51_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 2.810e-111
Identity = 169/189 (89.42%), Postives = 181/189 (95.77%), Query Frame = 3 
Query: 1317 VKSGTYDFEANKALLKLYQFFPDLCQPEKVALMLAKALMNVPTTDFMALMYIVPPSLHRCEPISSLKRGADALEMAKFVDFWQTCAEGDMPALIDKVPGFEKHIRVFIVHTLATTFQDSTRQNMEQCLDLDGTELADFVEANSDVVSAWPDGSKFKFALNEFNQIQPKKFKEAVEFDKILKTTEKLSSF 1883
            VKSGTYDFEANKALLKLYQFFPDLCQPEKVAL+LAKALMNVP+TDFMALMYIVPP+LHRCEP+ SLKR AD+LE AKFVDFWQTCA+GDMPALI+ VPGF+KH+RVFIVHTLATTFQDSTRQNMEQCLDLDG ELA FVEAN+DVVSA PDGSKFKFALNEFNQIQPKKFKE+VEFDKILKT +KLSSF
Sbjct:    7 VKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSASPDGSKFKFALNEFNQIQPKKFKESVEFDKILKTIDKLSSF 195
[Close]
BLAST of mRNA_P-fluviatile_contig18.3228.1 vs. uniprot
Match: A0A835Z1S6_9STRA (Eukaryotic translation initiation factor 3 k subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S6_9STRA)

HSP 1 Score: 208 bits (529), Expect = 5.650e-59
Identity = 116/224 (51.79%), Postives = 142/224 (63.39%), Query Frame = 3 
Query: 1206 LEQMDFPASYEVLRPVVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALMLAKALMNVPTTDFMALMYIVPPSLHRCEPISSLKRGADALEMAKFVDFWQTCAEGDMPALIDKVPGFEKHIRVFIVHTLATTFQDSTRQNMEQCLDLDGTELADFVEANSDVVSAWPDGSKFKFALNEFNQIQPKKFKEAVEFDKILKTTEKLS 1877
            ++ M  PA +  +RPVVEHEYFDHR VPQLE YL EQ  SGTYDFEANKALLKLYQFFPDL + + VAL   KALM +P  DF AL Y+ P +    EP++SL R  DALE A++  FW    E +  ALI ++PGF    R   +  LA TFQ      +E+ + L G EL  FV      V    DG +  FA NEFNQ+QPK+FKE+VEF+K+LK    LS
Sbjct:    2 VQPMQLPARHAAMRPVVEHEYFDHRVVPQLEAYLAEQASSGTYDFEANKALLKLYQFFPDLVKADMVALAAGKALMALPAPDFAALSYLAPAAALAAEPLTSLARALDALEGARYGAFWAVTREPEAAALIQRLPGFADQARRVALSALAATFQSVPLSALEEAVALSGAELEAFVGGLGGEVKLG-DG-RAAFARNEFNQMQPKRFKESVEFEKVLKAVGTLS 223
[Close]
BLAST of mRNA_P-fluviatile_contig18.3228.1 vs. uniprot
Match: A0A7S2FZN4_9STRA (Eukaryotic translation initiation factor 3 subunit K n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZN4_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.120e-43
Identity = 96/223 (43.05%), Postives = 139/223 (62.33%), Query Frame = 3 
Query: 1215 MDFPASYEVLRPVVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALMLAKALMNVPTTDFMALMYIVPPSLHRCEPISSLKRGADALEMAKFVDFWQTCAEGDMPALIDKVPGFEKHIRVFIVHTLATTFQDSTRQNMEQCLDLDGTELADFVEAN-SDVVSAWPDGSKFKFALNEFNQIQPKKFKEAVEFDKILKTTEKLSS 1880
            M  PASYE +  +++ + F+  ++ +L+ YLDEQ+ + TYDF ANKALLKLY F+PD    + +AL L KALM +P+TD M L+Y+VP S    EP+++L R A  LE AKFV+FW+    G    L+D V GF++ IR +++  L+ TFQ    +     L LD  +L ++V AN SD +S   +G    F  N  NQ +PKKFKE + FD++L   + L+S
Sbjct:    1 MALPASYEEIATLLDEQAFEKSSIEKLQAYLDEQIATETYDFVANKALLKLYSFYPDQASDQYIALALTKALMALPSTDMMLLLYLVPESAQTKEPVATLVRCAVHLETAKFVEFWEVANLGGNE-LLDAVSGFDEAIRSYMIGVLSITFQKVESETFADLLALDEGDLEEYVSANQSDKLSI--EGKNVVFTPNSENQQRPKKFKENISFDQMLPLIDFLAS 220
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BLAST of mRNA_P-fluviatile_contig18.3228.1 vs. uniprot
Match: A0A7S2H0N4_9STRA (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0N4_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.960e-35
Identity = 86/223 (38.57%), Postives = 128/223 (57.40%), Query Frame = 3 
Query: 1212 QMDFPASYEVLRPVVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALMLAKALMNVPTTDFMALMYIVPPSLHRCEPISSLKRGADALEMAKFVDFWQTCAEGDMPALIDKVPGFEKHIRVFIVHTLATTFQDSTRQNMEQCLDLDGTELADFVEANSDVVSAWPDGSKFKFAL-NEFNQIQPKKFKEAVEFDKILKTTEKLS 1877
            +M+ P S + +   +  +      +  L+EYL+EQV++ TYDF ANK L+KLYQF+P+      +AL + K++M +P+TD   L+Y+VP +L   EPI +L R AD LE A+FV+FW+    G    L+D +PGF + IR F++  L+ TFQ    +     L LD   L +F+   +D +    +  KF   L N  NQ +PKKFKE + FD +L     LS
Sbjct:    5 EMEIPQSAQSIAEKLALDEHSVELIDTLQEYLNEQVQTDTYDFMANKTLMKLYQFYPERSNENCIALAVTKSMMALPSTDLSVLLYLVPETLALKEPIHTLVRCADHLETARFVEFWEVANLGGNE-LLDAIPGFPEAIRSFMIGVLSMTFQKLQSETFLDLLMLDEESLEEFIAEQTDKLCL--EEKKFVIFLPNSENQSRPKKFKENISFDHMLPIINLLS 224
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BLAST of mRNA_P-fluviatile_contig18.3228.1 vs. uniprot
Match: A0A7S2WSD7_9STRA (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSD7_9STRA)

HSP 1 Score: 142 bits (357), Expect = 9.050e-35
Identity = 84/204 (41.18%), Postives = 117/204 (57.35%), Query Frame = 3 
Query: 1269 FDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALMLAKALMNVPTTDFMALMYIVPPSLHRCEPISSLKRGADALEMAKFVDFWQTCAEGDMPALIDKVPGFEKHIRVFIVHTLATTFQDSTRQNMEQCLDLDGTELADFVEANSDVVSAWPDGSKFKFALNEFNQIQPKKFKEAVEFDKILKTTEKLSS 1880
            +D  A+  LE Y+ EQV+  TYDF ANKALLKLYQFFP       VAL+L KALM +P+TD   L+Y+VP ++   EPI +L R  + LE  KFV+FW+    G    L+D + GF++ +R +++  L  TFQ    +     + L    LA++V   SDV+    +G +  F  N  NQ QPK FKE + FD +      L+S
Sbjct:   23 YDQDAIELLESYVAEQVEQNTYDFVANKALLKLYQFFPARTNEHMVALILTKALMALPSTDMTLLLYLVPDTVRAKEPILTLVRCHEHLETGKFVEFWEVANLGGNE-LLDAIHGFDEAMRQYMISVLCMTFQSLESEVFMDLVALPDEHLAEYVGTKSDVMRL--EGKQVIFVENPQNQPQPKTFKENISFDHLAPVMSLLTS 223
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BLAST of mRNA_P-fluviatile_contig18.3228.1 vs. uniprot
Match: W7U338_9STRA (Eukaryotic translation initiation factor 3 subunit K n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U338_9STRA)

HSP 1 Score: 129 bits (323), Expect = 9.190e-30
Identity = 76/204 (37.25%), Postives = 115/204 (56.37%), Query Frame = 3 
Query: 1269 FDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALMLAKALMNVPTTDFMALMYIVPPSLHRCEPISSLKRGADALEMAKFVDFWQTCAEGDMPALIDKVPGFEKHIRVFIVHTLATTFQDSTRQNMEQCLDLDGTELADFVEANSDVVSAWPDGSKFKFALNEFNQIQPKKFKEAVEFDKILKTTEKLSS 1880
            +    V  LEEYL  QVK G+YDFEANK+LLKLY  +P L   E V  +L KAL+N+P TDF  L+YI+P  L   E + ++K  A+ALE A++ DFW         A+   +P ++  IR  I+   A T++   + ++   + L G EL  F+ AN+  + A  +  +  FA N+ NQ   +K+KE V+   +L    +L++
Sbjct:   60 YTQEKVKHLEEYLQLQVKEGSYDFEANKSLLKLYLLYPPLANNENVETILLKALLNLPATDFTLLLYILPEKLQTDENVLTIKDAAEALETARYADFWSIL--NSRAAVFLAIPEWKDDIRKIILTVHAATYKAVDKAHVSDGVGLSGDELDSFLTANTPGLVAKVEVDRVIFAPNKENQPWVRKYKEKVDLQNMLGILNRLAA 261
[Close]
BLAST of mRNA_P-fluviatile_contig18.3228.1 vs. uniprot
Match: A0A7S4ULZ9_GUITH (Eukaryotic translation initiation factor 3 subunit K n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4ULZ9_GUITH)

HSP 1 Score: 125 bits (315), Expect = 3.170e-29
Identity = 71/195 (36.41%), Postives = 110/195 (56.41%), Query Frame = 3 
Query: 1269 FDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALMLAKALMNVPTTDFMALMYIVPPSLHRCEPISSLKRGADALEMAKFVDFWQTCAEGDMPALIDKVPGFEKHIRVFIVHTLATTFQDSTRQNMEQCLDLDGTELADFVEANSDVVSAWPDGSKFKFALNEFNQIQPKKFKEAVEFDKI 1853
            FD    PQLE Y+DEQ+K G  D +AN ALL+ YQ+ P     E V  +L KALM +P TDFM  MY+VP ++   + I  LK+ +D LE  +F ++W   A+    ++ + +PGF + IR +IV  ++ T+Q   R  +E  ++L G +L   +E    V      GS  +  +NEFN+   K  ++ + FD++
Sbjct:   14 FDPSITPQLEAYVDEQIKGGYTDLDANLALLRFYQYNPATANSEVVCKILVKALMQMPATDFMLCMYLVPGAVKE-QKIEVLKQLSDKLETCQFKEYWADMADEKNASVANGIPGFHEAIRQYIVGVISATYQVIARDELEILINLKGAQLDQLLEEKKWVAK----GSDVQIPVNEFNEASVKFKQDGISFDQL 203
[Close]
BLAST of mRNA_P-fluviatile_contig18.3228.1 vs. uniprot
Match: A0A7S2SPG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPG3_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.770e-26
Identity = 62/133 (46.62%), Postives = 85/133 (63.91%), Query Frame = 3 
Query: 1269 FDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALMLAKALMNVPTTDFMALMYIVPPSLHRCEPISSLKRGADALEMAKFVDFWQTCAEGDMPALIDKVPGFEKHIRVFIVHTLATTFQ 1667
            +D  A+  LE Y+ EQV+  TYDF ANKALLKLYQFFP       VAL+L KALM +P+TD   L+Y+VP ++   EPI +L R  + LE  KFV+FW+    G    L+D + GF++ +R +++  L  TFQ
Sbjct:   23 YDQDAIELLESYVAEQVEQNTYDFVANKALLKLYQFFPARTNEHMVALILTKALMALPSTDMTLLLYLVPDTVRAKEPILTLVRCHEHLETGKFVEFWEVANLGGNE-LLDAIHGFDEAMRQYMISVLCMTFQ 154
[Close]
BLAST of mRNA_P-fluviatile_contig18.3228.1 vs. uniprot
Match: A0A1X6NQY4_PORUM (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQY4_PORUM)

HSP 1 Score: 110 bits (275), Expect = 1.060e-23
Identity = 69/205 (33.66%), Postives = 117/205 (57.07%), Query Frame = 3 
Query: 1251 VVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCQPEKVALMLAKALMNVPTTDFMALMYIVPPSLHRCEPISSLKRGADALEMAKFVDFWQTCAEGDMPALIDKVPGFEKHIRVFIVHTLATTFQDSTRQNMEQCLDLDGTELADFVEANSDVVSA--WPDGSKFKFAL--NEFNQIQPKKFKEAVEFDKI 1853
            +++ + +D   +P LEEY+++QV +GT D  AN A LKLYQF+P   +   V+ +L KA+M +P+TDF+  MY++P +    EPI +L + A  LE  +F DFW   A G +  L+D VPGF++ +R F++  +  T++   R  + + L L+G + A    A  +V+ +  W  G +    +  N  N+ + K   E + F ++
Sbjct:   17 LLQSQRYDPDILPTLEEYVEQQVATGTNDAMANLATLKLYQFYPATYKTAVVSKILIKAIMALPSTDFLCAMYLIPAATADDEPIPALVQLASMLETGRFEDFWP--ATGAVRQLLDGVPGFDEAVRSFMLVVIGRTYKRVERTVLARLLGLEGVDEAAEEAAVDEVIKSVGWKAGGEGMIVVPGNGENEERAKTVGEQLTFRQV 219
[Close]
BLAST of mRNA_P-fluviatile_contig18.3228.1 vs. uniprot
Match: A0A067CBU0_SAPPC (Eukaryotic translation initiation factor 3 subunit K n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CBU0_SAPPC)

HSP 1 Score: 108 bits (271), Expect = 3.370e-23
Identity = 76/206 (36.89%), Postives = 114/206 (55.34%), Query Frame = 3 
Query: 1272 DHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCQPE----KVALMLAKALMNVPTTDFMALMYIVPPSLHRCEPISSLKRGADALEMAKFVDFWQTCAEGDMPALIDKVPGFEKHIRVFIVHTLATTFQDSTRQNMEQCLDLDGTELADFVEANSDVVSAWPDGSKFKFALNEFNQIQPKKFKEAVEFDKILKTTEKLS 1877
            D + V  LE YLDEQ+ S   D EAN  LLKLY  +P   +PE    +VA +LAK LM +P+  F+   Y+V  +L + + I+ L +  D L+   F DFW      D+P    K+PGFE+ +R FI+ T+A + +   +  ++  L+L   ++A  V   +++     D S +    N  NQ++PKKFKE +EF  IL T + LS
Sbjct:   29 DEKLVGLLEAYLDEQIASNVVDEEANLMLLKLYTIYP--VKPEQHQTRVAQVLAKGLMALPSKYFLGATYMVTEALRKDKNITDLLKAGDVLQSCLFTDFWTL----DLP-FAKKIPGFEQAVRAFILSTIAKSHEVVAKAFVQAQLNLSEKDVASLV---AELGWTTKDAS-YVVTPNSENQMRPKKFKEDIEFADILDTIQVLS 223
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF51_ECTSI2.810e-11189.42Eukaryotic translation initiation factor 3 k subun... [more]
A0A835Z1S6_9STRA5.650e-5951.79Eukaryotic translation initiation factor 3 k subun... [more]
A0A7S2FZN4_9STRA1.120e-4343.05Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2H0N4_9STRA4.960e-3538.57Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2WSD7_9STRA9.050e-3541.18Eukaryotic translation initiation factor 3 subunit... [more]
W7U338_9STRA9.190e-3037.25Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S4ULZ9_GUITH3.170e-2936.41Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2SPG3_9STRA2.770e-2646.62Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1X6NQY4_PORUM1.060e-2333.66Eukaryotic translation initiation factor 3 subunit... [more]
A0A067CBU0_SAPPC3.370e-2336.89Eukaryotic translation initiation factor 3 subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig18contigP-fluviatile_contig18:1236278..1243715 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.5
Seed ortholog evalue1.9e-92
Seed eggNOG ortholog2880.D8LF51
Preferred nameEIF3K
KEGG koko:K05699,ko:K13344,ko:K15028
KEGG TC3.A.20.1
KEGG Pathwayko04146,ko04510,ko04520,ko04530,ko04670,ko04810,ko05146,ko05203,ko05322,map04146,map04510,map04520,map04530,map04670,map04810,map05146,map05203,map05322
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005852,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010941,GO:0010942,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0042981,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0065007,GO:0071704,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.ribosome binding
EggNOG OGsKOG3252@1,KOG3252@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03012,ko04131,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Exons6
Model size2158
Cds size687
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig18.3228.1prot_P-fluviatile_contig18.3228.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig18 1237477..1243443 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815763.0199847-UTR-P-fluviatile_contig18:1236277..12374761622815763.0199847-UTR-P-fluviatile_contig18:1236277..1237476Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1236278..1237476 +
1693563255.449511-UTR-P-fluviatile_contig18:1236277..12374761693563255.449511-UTR-P-fluviatile_contig18:1236277..1237476Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1236278..1237476 +
1622815763.104631-UTR-P-fluviatile_contig18:1243443..12437151622815763.104631-UTR-P-fluviatile_contig18:1243443..1243715Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1243444..1243715 +
1693563255.509914-UTR-P-fluviatile_contig18:1243443..12437151693563255.509914-UTR-P-fluviatile_contig18:1243443..1243715Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 1243444..1243715 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815763.0312705-CDS-P-fluviatile_contig18:1237476..12375931622815763.0312705-CDS-P-fluviatile_contig18:1237476..1237593Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1237477..1237593 +
1693563255.4598937-CDS-P-fluviatile_contig18:1237476..12375931693563255.4598937-CDS-P-fluviatile_contig18:1237476..1237593Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1237477..1237593 +
1622815763.0424387-CDS-P-fluviatile_contig18:1238419..12385271622815763.0424387-CDS-P-fluviatile_contig18:1238419..1238527Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1238420..1238527 +
1693563255.4683342-CDS-P-fluviatile_contig18:1238419..12385271693563255.4683342-CDS-P-fluviatile_contig18:1238419..1238527Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1238420..1238527 +
1622815763.055073-CDS-P-fluviatile_contig18:1239035..12391761622815763.055073-CDS-P-fluviatile_contig18:1239035..1239176Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1239036..1239176 +
1693563255.476444-CDS-P-fluviatile_contig18:1239035..12391761693563255.476444-CDS-P-fluviatile_contig18:1239035..1239176Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1239036..1239176 +
1622815763.069386-CDS-P-fluviatile_contig18:1239937..12400781622815763.069386-CDS-P-fluviatile_contig18:1239937..1240078Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1239938..1240078 +
1693563255.4844425-CDS-P-fluviatile_contig18:1239937..12400781693563255.4844425-CDS-P-fluviatile_contig18:1239937..1240078Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1239938..1240078 +
1622815763.0813248-CDS-P-fluviatile_contig18:1241041..12411131622815763.0813248-CDS-P-fluviatile_contig18:1241041..1241113Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1241042..1241113 +
1693563255.4927976-CDS-P-fluviatile_contig18:1241041..12411131693563255.4927976-CDS-P-fluviatile_contig18:1241041..1241113Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1241042..1241113 +
1622815763.0945325-CDS-P-fluviatile_contig18:1243335..12434431622815763.0945325-CDS-P-fluviatile_contig18:1243335..1243443Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1243336..1243443 +
1693563255.5011423-CDS-P-fluviatile_contig18:1243335..12434431693563255.5011423-CDS-P-fluviatile_contig18:1243335..1243443Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 1243336..1243443 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig18.3228.1

>prot_P-fluviatile_contig18.3228.1 ID=prot_P-fluviatile_contig18.3228.1|Name=mRNA_P-fluviatile_contig18.3228.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=229bp
MPLEQMDFPASYEVLRPVVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEAN
KALLKLYQFFPDLCQPEKVALMLAKALMNVPTTDFMALMYIVPPSLHRCE
PISSLKRGADALEMAKFVDFWQTCAEGDMPALIDKVPGFEKHIRVFIVHT
LATTFQDSTRQNMEQCLDLDGTELADFVEANSDVVSAWPDGSKFKFALNE
FNQIQPKKFKEAVEFDKILKTTEKLSSF*
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mRNA from alignment at P-fluviatile_contig18:1236278..1243715+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig18.3228.1 ID=mRNA_P-fluviatile_contig18.3228.1|Name=mRNA_P-fluviatile_contig18.3228.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7438bp|location=Sequence derived from alignment at P-fluviatile_contig18:1236278..1243715+ (Porterinema fluviatile SAG_2381)
AGGAAAACGAAGGTTCGCTATCCTGGCCGTGTATCGAGGTTGTGTGACCA
CAGAGTATCAAGGTTGTGTGACCACAACTGCAGTACACCTGCGGTCTTGG
TTGGAGAGGAAGCACTCCCTGTATTGCTCCACTTCACGCTGTCACGGCGA
GAGAAGTCGCTCTATTCGATTGATTACTGCTATGCAACAGCGCAAGAAAT
GATCGAAGTCCAAGGTTGCCCAGAAGGCCGACTCGACCTCCCTTTTACTT
TAAATCGAACGAAGGGGCGTGGTCGTTGCATGTTTGTGTTGCTGGTTGCT
TCTCGACGACCTTCTCATGTACCTCAGAAGCAATCGGTGAAGTCGACAAG
CTTAATGAGGGGAGAGACTACCTTTAAGCAGACTCTGCAGAGAAAGATAA
ACAATGTGCAGATTTACCTGCTGAGTTCACACCAAGATGTTTCCTTACGA
GATTGGATCGTGCGCACGCTGAGTTTGATGACCCTGATCGCTAGCCATTG
CATCTGTTCGCCCTCACACTTTGTCATTGCAATCGCACTGCTCCCCGGTA
ACATGCTCTCGGCATGCTTTCCCTTCCCAAGGGTTAGGACCTGGGTGTTG
TGCTTCGTAAAGCGCATCGCCTTAGAGGGCCGGTCGGACAGGTGTTGATC
TTTTTTGGGCCAAATCGCCGGAAACAAGGACAACATCAACGCAAACACGG
CCGTTCGGTGAAAGAAAAAAAAGTGCAATCGTTGCTGCGTTGCTCGGCTG
CGAGCGTAGGCTGCGGCCGCGCCGCTGAGAAAGCTTATAGAAGAGTCGCA
TCTAGATGTCGTGTTTTGGCGATATCGCTCTCTTTGGAAGTCGCCGTGAA
CGGCAGTGCGTCACCGGGCAAATCCGTCAAGCTCGGTCAGCCAAGCTCAG
GTCAGGCGGTCGTTGTGCACCTGCCTCCAGGGGAACGCGGGCGTCGATCT
TGATCGTCTGCCGTAACGTAAGAGCGAAAGGGCTCCTAGTGCTCATAAAA
AGAAGACGGGACGACGACGAGCAAAGAACAAAACATTGATGACCGAGTCA
GAATACGGCGAGCACCTCTTGCCTCTGTTTTGTTTGACAACGCTACGCGT
CATCCCCCCTTCCCCTTTCTTCCGCTCCCAAAATCCGCCGCGGAGCCGCA
GAGTCCTCTTTCAGCGCTGCCAGACTCTAGCTGTCTTGCACTGCCAAGCA
TGCCGTTGGAGCAAATGGACTTTCCGGCATCGTACGAGGTCTTGAGGCCC
GTCGTGGAGCACGAGTACTTCGACCACCGGGCCGTGCCTCAACTGGAAGA
GTACCTCGACGAGCAGGTGCATGAGAAGAAAACAAAAAGGTCTAGTTTTA
GGTGCAGGGATTACAGGGTGTCATGCATGCCGGCACGCTGATTTTACATC
GTACGAGGCTGGATAGCTTTGGGGAGGGGGGCAAGGAGTTGGATCGTGGA
TTGATCGCCATGAATTGGTCCGGATTGATCGCCATGAATAGGTCCGACCG
AAAGGGGTTGTGGTTTTGGGGGGCGGGAGTTTATGTTGTGTCTGGAGCAT
TTGATCGTTGGATCTTTGACAACGCTTGCCGCGCACTTTCAGCAAGGGAA
AAACGGGGGGGGGTGAATGTCGACGTGTCGATTTGCGGTATCTGACCCAC
ACGTGATCACAATTTCGAGAATGCACTATGCACGGGAGGCTAGGGTGTGC
GACCTTTATGGGTGACTTTCACAACAGGTTCATCCAGTCACAAGCCTTGC
TGTCTGCTTTTCTGCACCTCGCTCTATTCCCCACTGCTGTGTTGATCTCG
CTGAGAGCAACGAAGTCGCTGTTTGTGCCCTAGGACGTTGCAGCTTTCAG
ATCCCGCTGCCCCCGTGCCCTTTCCTTCTGCGCAAACCCGAGGCATTCAT
TCCGTTGCCTCGGTTGGCAAGGATGACGCCCGCTCCTCTCGCCCCGCTGC
TCTGGGTGGGGAATGGCGCGCCAATCCAGAAACGACGCCTGTGCCTTTCC
GCGCGAAGTGCAGCCCCCCGCTGGCCGAACGGTGTAGGTTCTGTTTCATA
ACAAAGACACGAAGATGATTATAAACGCACCCGTGTGTGGGTGCTTGTGT
TTGTGTCCCTACTGCGCCAATTTCCTGCTACCCTGCCACAAGGTGAAGTC
AGGAACCTACGATTTCGAGGCGAACAAGGCGCTGCTGAAGCTGTACCAGT
TCTTCCCGGACCTGTGTCAGCCGGAGAAGGTGGCTCTCATGCTCGCAAAG
GTGAGGCCAACCAAAACACAGCGTGGGCGTGAAGGAATGCCAATAAACTG
GCGATGGAAGTAGGAAGGTGATTCAAACACGATTCAAAATTTGTACCCCA
AGCGCTTCCTCGTTGATGCGGCCACCAGGGCGTCCATGACGTCGGCCCTC
CAGTGCCCATATTTCTGCGGCCCGACTTGCCCTGGTTCGGTCACAGCCTC
ATTCGCAGGGCGAAATCTGAGTGGCATTGCACCAAAAAAAATCAGCGACA
ATTCTGGACGATGATTTTCAAATTTTTCACTCGTTTTGGTTTTGAGACAT
TGATTGGCTGGTTTTGCCGGAAGGCTACAGGGAGCTACGACCGATTTCGC
CAAGTGAATGTACTCTTGAAGCCCGCTCTAAAATGTGAAACATCAAGAGC
AACAGCAGTCATCACTGCGGCAAGCGAAAACGATATCAAATGACCCCCTA
CCCCTCCCGCACCCGCCCTGTATCCCGCCGCAACCACTGCGCGGTGCTTC
ACTCCCAGGCACTCATGAACGTGCCGACCACGGACTTCATGGCGTTGATG
TACATCGTGCCACCGTCGCTACACCGGTGCGAGCCCATCAGCTCGCTCAA
GAGGGGGGCGGACGCATTAGAGATGGCTAAGTTTGTCGACTTCTGGCAGG
TGAGGGGAGAAGAAAGAGGCGATCGAGAGAAGTTGCTAGCGTCGGAGGGT
GCCAACGTATTGCCACGTGCTCCACGAGTTTCGCACGGATGGTGGTGTGG
TGTGAAGATGCCTTATGATTTTTGGCTCAGGGCTATAGTTTTCCTGGTCT
CTTGGAGCAGTAGTCCCGCGCGTGCACGACACCTTTTGAGCGACTGTCCC
CCACGACGAAGGCGAGCTGGGACTTGGAGCCCTCAATAAAATGTTTCGAG
GATTGATCAGTAAAATGTTTCCAGAATTGATGCGATTCAGACGTGGCAAC
ACAAAAGCGCGAGAATGACGCCGGTTTCGGGGCGGTGCCCTTCCGCTTCG
CGGTGTGTGCGGATAAGATTCTAGGATTTTTCTGTAATGCGTCGGGATTA
CGCTTTGTCGCCTCCCCGGCCACAAGCGTCATGAAAAAACTGCTCCAACC
TGGTCCTGCCTGGCTTGGTTCACCGTGGAACCTCTCAGGCGGGCTGTACT
GTGGGGCTGTCCGCTGGCCAACCGTGTCTCCATCGGTGTCGCACACCCTC
GACCGTGCGTTCGGCTAGTCTTGGTTATCCTCGAACAATAGGGAGTGTTC
GACTGCTGTTGTGCTCTTCCAAAGCAAAGCGGATGCGTTTTTAGGGTCAA
CACTATCTGGCTGCCTGCCCCATCCCGCGCGTTGCGCTCATCGGCGTGTG
CCCGATTTTGGTTCCCGTTTGTTCCGACCGATCGTGATCGTGACGGCGCG
ATTGCGGCAGACCTGCGCGGAGGGGGACATGCCAGCATTGATAGACAAGG
TGCCCGGGTTCGAGAAGCACATCCGCGTGTTCATCGTCCACACGCTGGCC
ACTACTTTCCAGGACTCGACGCGACAGAACATGGAGCAATGTCTCGACTT
GGTGAGCGAGGCCGGTGGCCCTTGCAGAGGAATTAAGGGGACCCGTAAGG
GGGTCGGCATGAGCGCGTAGGGAAGGGGCAGGGAGGGACGGGGAAGGAAA
GGGAAGGAAAGGAAACGCGCCTCGTCTGACGCAAGTGAACGGGGGGGGGA
CGGGGAGGGAAGGGGAGGGATACTGCAGGATTCTCCTTTTCGCTCTACTG
ATAGCGGAAACGTATTGGATCGGACTCTCGCATGGCTTGGAACGGTTCAG
CGGTTCCCTGTTTAGCGGCGATGCCCTATCTCGTGGCGACCGGACCCCAT
GAGAACGCTGCATGCCGATTGTACAAACCATACTAAGGTTTATCGGCGAT
GCCCTGAGTAACGGTTATATAATCACACTACTAACCTCTAAGTCGGGACC
AAAATCGTACGTTCATTCCAAAATCGTACGTTCATTCTGGGACCGTCCGA
TTTTTGCATGGCCGCACTTACCGGCTTGGCCTTATTCGCCACCTTTCCTC
GAGTACCGTCGATCGCCTTCGGCAGCGGTGGGCAGATCTGTGTGGCTATT
CGTCACATCCGGGCATCGACTGTGGCACACACCATGAGGTAGCCTCGTAT
TCCGCGCTCGAGCCGAACGCTTCTGAGATCTAGCGGCCCGGCTGCTGCTG
CTGCTTCCACCAACGGTACTACTTCACGCAGTTGCCTGTGTCTTTTTTTT
TTTTTTTTTTTACCCACCCCGGCAGCTAGCTACGAGGATGCACGTTCTCT
GCCGCTAGCCTGTGTCCCGCCAGTGGCTGGTAATCTCGTTACAAGACCGT
GAGTGCCTTCGATTGGGCGCACCATACCTCACGTTCATGTGCCTGTGTCT
TGGGGTCTCGATTGCTCGCCGTGAAACTCGCCTGCCCTCGGGTTACCGTT
ACTGCCGCTGCTGCCGCCACCGCCGCCGCCACCGCCGCCGCTGCTGCTGC
TGCTGCCGCCTCAGGACGGAACGGAGCTGGCGGACTTTGTGGAGGCAAAC
TCGGACGTGGTATCAGCCTGGCCGGACGGGTCGAAGGTGCGTTACCGCTC
CCGTCGCCGTTACACCGTTGCCGAACTCGGGTGTGTGATATTCTCCGCGC
ATTCGTCTGCTGTGAAGGCTTCATTCGGGCAGCTTTTCTTGAGGCGCGAT
CGTCTGCGGGGGTGGAAGCTCGCTTCTCCTCCCGAATGTATGGATCCCAT
TCTCCAGGGCCCCGCAACAAAATGGAGCGGCGGGACACAAGCGCCCGAGT
TGGCGTCGCGCGTCAACTTTCGGGATGGCCTTGCAACCAAATGTTCCGTT
GGATCATGCGCTCACCGTGTACTCTGAAGTTATCTCGATCCTTGCTCGGC
CAGCCACTTCCCTCCTACTTCCATTGACACATTAGTCAAGTCGGTTATGG
CGTGAAATCCATAACTCTTTAACGGAAGCGTTCCTTGCAACAAACTTAGA
TTCGTGGAAAAAGTATTTATACACAGGAGCTCTTGAAAAATTGATAAAAA
AATCGGCTCAATTGTGATTGAAAAACTTACGCTCAGAGTTCCTCTTTTAG
AATTTTGTAAACTGAATTTTGTAAACAGGCTCGGTACGCCCCCCCCCTCG
CCCCCAACAAGATGGAGGAATCCTGAGCGACCACCCTACGTCGTAAGCGG
GGCGCCGAAGTATCACTGAGCCGCCGGTTTGCCATGGTTGTTGAGATTGT
GCCGTTATTGCACCGGGCAAAACGAGGCTGCCCAAGGGCACCGTCGGCCC
CCTCGCAGAGCGGTAGAACGTTGGCCCAGAGTACCCGACAGCGCTTTGGA
AACACCGCAAAACTCGATGACTTTGTCTAGGCTTCCTTGCGTCGCTTACG
TCAATAGTGTGTAGGGCAAGCGCAACTTCGGAAGATGAGTTGAAGACTAT
CGTCGAGCTGCACGACAGAGTACGACGGTGACACGTAAGAGAGGGTGTTG
CAGAGCCTGTCCAACGCGTACCATCAAACACTTCGTAGAATAGGCGATAA
CCGTTTCACGTGAAGCGTACCCGGGTCAAGGCGCGGCAGAGGGCAGGGAC
GTTGAAAAGGTGGTTAAATAGTAAACTACCAGGAAGCACGTAGCTTGGCC
TGGGACTCACTGGCATCCGAGGACTTTTTTCTTTTTTCACGGGGAGGGGG
GTGTTTGTACCCCGGAATGGGGCAAAAGTACAGCCATTTTTGAGTCGACT
TAATTTTCTTCAGACCGTTGGTAAATGCAGGAAAATGCTTGAAAAAAAAA
AGGAGTAGGTTCAACCCAAAAAACGCCGAAGGTTTCAAAAAATCATCGCG
TCGGGCATCGGACACGGGTAAAGGTCCGTACAAACATAACGGACTTTCCT
TATGTGTCAGAGGAGGTATCGTTCTGGCTGGTCTCACTGAGGCCTTGCTA
TCTCCCTGGAAGGCCGGTGCGTCATGAACCTCTGCGTCCCTCCTTCCTTG
AAGTTGACTTTTGCACAGTCATTTCACGTTTTCTACCGTATTTGCAGGCG
GTTGAGAGTAATTGACTTACCCTCGAGGTCATGGAGAGGCGCGTACTTTT
TCGGGTGATTTTGCCAGGCATTGGAAATGGTTTGGTGTGGCCGCCCTCAG
GGGCCTGGACACGGCCAAACATTTTGTACAAGTCGGCGTTTCTGTCAAGG
CGCAAATGCCGTTTGATACCTTGAAATTTTCGCCAAAATCCAATCCTAAG
CACGGTGTAGTTGTGGCGCATACAAAGAGCGGAGGGTGTTGTGGATGGGT
GGCATAAGCAATCATGTGCCTACAAGCGCACGCAAATCCGTAAATCGTTT
TGCGCTCTCCAGCGGTGGTTTCGTGTTGATTTGCTGATTTCGCGTGAAGC
TCGTCGCTTAAGCGCAAGCCTTGCGCACATTGTTGTGAAGGCAAAAACCG
CAAGCTTTGCAGGACTCTCCCCATCTTGCTGTCTCCCCCCGGCCTCCCCA
CCCGCCCAGCGCACGCTCGAAGCGGCAGTGCCCTCCCCCGAAAAGGTGTT
CCATGACCTTGGATTCGGTAAACGGAAGGTAGGACAAGAAGAGGGCGCTT
GCATGAGGGTTGCAGCTTGTGTGTGTGACGGCGCGGGGACGTTTCACGTC
GCCGGACTTGACGCGATTTATGCTCCCGGCCCGTTTCGTACGTTTTCTCT
TGGATGGTCGCGTGATCCGTTATTGGTAGTTTTGTGCAAAACTGCTTTAG
ATGTTTCCATGATATGGCTGACCCGTTTCCTCTCGCCCCCGTCCTCTTTT
CTCCGCAGTTCAAGTTCGCCCTGAACGAGTTCAACCAGATCCAGCCTAAG
AAGTTCAAGGAGGCGGTGGAGTTCGACAAGATTCTCAAGACGACCGAGAA
GCTCTCCAGCTTCTAAGCGACACATGCATCTGTCGGCCTTTCGGATCCCT
TCTCCGCACTTGCAGGTTGTCGGTGTAGATGTCGCAGAATTGGCGTGGAA
CACAAGCAGCTTGTAGTGGAGAGCAGAAAGTGTCACTAGCTGCTTGGGGG
CGGCAATTAGAACAGGTTCCCGAATTTCACAAATCAACCGACCCTAACAC
GGACGGGTCGGTTTGTTGAGGCGTAGACATGAACAAACCGGTGTTTATTG
AAACCGTCGAATTCCGTGATTCATTTGTGGGGTACGTA
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Coding sequence (CDS) from alignment at P-fluviatile_contig18:1236278..1243715+

>mRNA_P-fluviatile_contig18.3228.1 ID=mRNA_P-fluviatile_contig18.3228.1|Name=mRNA_P-fluviatile_contig18.3228.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1374bp|location=Sequence derived from alignment at P-fluviatile_contig18:1236278..1243715+ (Porterinema fluviatile SAG_2381)
ATGCCGTTGGAGCAAATGGACTTTCCGGCATCGTACGAGGTCTTGAGGCC
CGTCGTGGAGCACGAGTACTTCGACCACCGGGCCGTGCCTCAACTGGAAG
AGTACCTCGACGAGCAGATGCCGTTGGAGCAAATGGACTTTCCGGCATCG
TACGAGGTCTTGAGGCCCGTCGTGGAGCACGAGTACTTCGACCACCGGGC
CGTGCCTCAACTGGAAGAGTACCTCGACGAGCAGGTGAAGTCAGGAACCT
ACGATTTCGAGGCGAACAAGGCGCTGCTGAAGCTGTACCAGTTCTTCCCG
GACCTGTGTCAGCCGGAGAAGGTGGCTCTCATGCTCGCAAAGGTGAAGTC
AGGAACCTACGATTTCGAGGCGAACAAGGCGCTGCTGAAGCTGTACCAGT
TCTTCCCGGACCTGTGTCAGCCGGAGAAGGTGGCTCTCATGCTCGCAAAG
GCACTCATGAACGTGCCGACCACGGACTTCATGGCGTTGATGTACATCGT
GCCACCGTCGCTACACCGGTGCGAGCCCATCAGCTCGCTCAAGAGGGGGG
CGGACGCATTAGAGATGGCTAAGTTTGTCGACTTCTGGCAGGCACTCATG
AACGTGCCGACCACGGACTTCATGGCGTTGATGTACATCGTGCCACCGTC
GCTACACCGGTGCGAGCCCATCAGCTCGCTCAAGAGGGGGGCGGACGCAT
TAGAGATGGCTAAGTTTGTCGACTTCTGGCAGACCTGCGCGGAGGGGGAC
ATGCCAGCATTGATAGACAAGGTGCCCGGGTTCGAGAAGCACATCCGCGT
GTTCATCGTCCACACGCTGGCCACTACTTTCCAGGACTCGACGCGACAGA
ACATGGAGCAATGTCTCGACTTGACCTGCGCGGAGGGGGACATGCCAGCA
TTGATAGACAAGGTGCCCGGGTTCGAGAAGCACATCCGCGTGTTCATCGT
CCACACGCTGGCCACTACTTTCCAGGACTCGACGCGACAGAACATGGAGC
AATGTCTCGACTTGGACGGAACGGAGCTGGCGGACTTTGTGGAGGCAAAC
TCGGACGTGGTATCAGCCTGGCCGGACGGGTCGAAGGACGGAACGGAGCT
GGCGGACTTTGTGGAGGCAAACTCGGACGTGGTATCAGCCTGGCCGGACG
GGTCGAAGTTCAAGTTCGCCCTGAACGAGTTCAACCAGATCCAGCCTAAG
AAGTTCAAGGAGGCGGTGGAGTTCGACAAGATTCTCAAGACGACCGAGAA
GCTCTCCAGCTTCTAATTCAAGTTCGCCCTGAACGAGTTCAACCAGATCC
AGCCTAAGAAGTTCAAGGAGGCGGTGGAGTTCGACAAGATTCTCAAGACG
ACCGAGAAGCTCTCCAGCTTCTAA
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