mRNA_P-fluviatile_contig18.3203.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig18.3203.1 vs. uniprot
Match: D7FWP0_ECTSI (Beta-hydroxyacyl-ACP dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP0_ECTSI) HSP 1 Score: 260 bits (664), Expect = 1.920e-78 Identity = 139/178 (78.09%), Postives = 149/178 (83.71%), Query Frame = 1
Query: 52 MVPSSCFALIAALCALLPETTAFVAPT-----NVA-RARARSTLRSSSRCVPALEMGDEAAAAEGEARPGPTAADISKGIAHPEAVFTVPDNILKVLPHRYPFALVDKVLHFEPGKSIVGVKCITNNEPQFTGHFPDQPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 567
M+PS AALCALLPE T F+AP+ N A A AR+ SSSR VPAL M +EAAA EGE P PTA+DISKGIAHPEA+FTVP+NILKVLPHRYPFALVDKVLHF PGKSI+G+KCITNNEPQFTGHFPD PIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV
Sbjct: 1 MLPSYFMTTAAALCALLPEVTGFLAPSAFMGSNTAPTAAARAAAASSSR-VPALRMAEEAAAGEGEEAPAPTASDISKGIAHPEAIFTVPENILKVLPHRYPFALVDKVLHFVPGKSIIGIKCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 177
BLAST of mRNA_P-fluviatile_contig18.3203.1 vs. uniprot
Match: A0A836C6N5_9STRA (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6N5_9STRA) HSP 1 Score: 182 bits (462), Expect = 4.040e-50 Identity = 84/102 (82.35%), Postives = 94/102 (92.16%), Query Frame = 1
Query: 262 SKGIAHPEAVFTVPDNILKVLPHRYPFALVDKVLHFEPGKSIVGVKCITNNEPQFTGHFPDQPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 567
SKGIAHPEA+FTV ++I K+LPHRYPFALVDKV++FEPGK VG+KCITNNEPQFTGHFPD+PIMPGVLQVEAMAQLGG+I LQ P SDG+GTFFF GVDGV
Sbjct: 12 SKGIAHPEAIFTVDEHIAKILPHRYPFALVDKVIYFEPGKRAVGIKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGIIALQAPISDGKGTFFFGGVDGV 113
BLAST of mRNA_P-fluviatile_contig18.3203.1 vs. uniprot
Match: A0A7S3X4Z6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X4Z6_9SPIT) HSP 1 Score: 150 bits (379), Expect = 4.010e-39 Identity = 72/97 (74.23%), Postives = 82/97 (84.54%), Query Frame = 1
Query: 283 EAVFTVPDN--ILKVLPHRYPFALVDKVLHFEPGKSIVGVKCITNNEPQFTGHFPDQPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 567
E+V V DN I K+LPHRYPF LVDKV+HFE GK VGVK +T NEPQFTGHFPD+PIMPGVL VEAMAQLGG++CLQ+P SDGQG FFFAG+DG+
Sbjct: 22 ESVPLVFDNVQIAKILPHRYPFLLVDKVVHFEAGKKAVGVKNVTANEPQFTGHFPDRPIMPGVLMVEAMAQLGGIVCLQDPVSDGQGEFFFAGIDGI 118
BLAST of mRNA_P-fluviatile_contig18.3203.1 vs. uniprot
Match: A0A7R9UF58_9STRA (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF58_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.640e-38 Identity = 73/103 (70.87%), Postives = 86/103 (83.50%), Query Frame = 1
Query: 259 ISKGIAHPEAVFTVPDNILKVLPHRYPFALVDKVLHFEPGKSIVGVKCITNNEPQFTGHFPDQPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 567
++KG+ E VF V + I VLPHRYPFALVDKV+ FE GK VG+KC+TNNEPQFTGHFPD+PIMPGVL +EAMAQLGG+I LQEP SDG+G FFFAG++GV
Sbjct: 57 LTKGV---ETVFPV-EKIADVLPHRYPFALVDKVVEFEAGKRAVGIKCVTNNEPQFTGHFPDRPIMPGVLMIEAMAQLGGVIALQEPLSDGKGIFFFAGIEGV 155
BLAST of mRNA_P-fluviatile_contig18.3203.1 vs. uniprot
Match: A0A1S6K7Y0_9DINO (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gambierdiscus excentricus TaxID=986170 RepID=A0A1S6K7Y0_9DINO) HSP 1 Score: 153 bits (387), Expect = 1.650e-38 Identity = 86/137 (62.77%), Postives = 99/137 (72.26%), Query Frame = 1
Query: 181 CVPALEMGDEAAAAEGEARPGPTA--ADISKGIAH----PEAVFTVPDNIL--KVLPHRYPFALVDKVLHFEPGKSIVGVKCITNNEPQFTGHFPDQPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 567
C+ A+ AAAA+ +AR A D KG H E V V DN+ KVLPHRYPF LVDKV+ FEPGK IVGVK +T NEPQFTGHFPD+PIMPGVL VEAMAQLGGL+CLQ+P SDG+G FFFAG+DG+
Sbjct: 64 CLVAICAATAAAAAKVQARTRCKADGEDKFKGAQHYSGLTEGVPLVMDNVAVAKVLPHRYPFLLVDKVVAFEPGKKIVGVKNVTANEPQFTGHFPDRPIMPGVLMVEAMAQLGGLVCLQDPISDGKGEFFFAGIDGI 200
BLAST of mRNA_P-fluviatile_contig18.3203.1 vs. uniprot
Match: A0A1S6K873_9DINO (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gambierdiscus belizeanus TaxID=439316 RepID=A0A1S6K873_9DINO) HSP 1 Score: 152 bits (384), Expect = 4.760e-38 Identity = 77/107 (71.96%), Postives = 86/107 (80.37%), Query Frame = 1
Query: 253 ADISKGIAHPEAVFTVPDNIL--KVLPHRYPFALVDKVLHFEPGKSIVGVKCITNNEPQFTGHFPDQPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 567
AD G+ E+V V DN+ KVLPHRYPF LVDKV+ FEPGK IVGVK +T NEPQFTGHFPD+PIMPGVL VEAMAQLGGL+CLQ P SDGQG FFFAG+DG+
Sbjct: 100 ADYFSGLT--ESVPLVMDNVAVAKVLPHRYPFLLVDKVVAFEPGKKIVGVKNVTANEPQFTGHFPDRPIMPGVLMVEAMAQLGGLVCLQAPISDGQGEFFFAGIDGI 204
BLAST of mRNA_P-fluviatile_contig18.3203.1 vs. uniprot
Match: A0A7S2DJT4_9DINO (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=2 Tax=Alexandrium TaxID=2924 RepID=A0A7S2DJT4_9DINO) HSP 1 Score: 148 bits (374), Expect = 1.440e-37 Identity = 71/97 (73.20%), Postives = 82/97 (84.54%), Query Frame = 1
Query: 283 EAVFTVPDN--ILKVLPHRYPFALVDKVLHFEPGKSIVGVKCITNNEPQFTGHFPDQPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 567
E+V V DN + K+LPHRYPF LVDKV+ FE GK IVGVK +T NEPQFTGHFPD+PIMPGVL VEAMAQLGGL+CLQ+P SDG+G FFFAG+DG+
Sbjct: 35 ESVPLVMDNEGVAKILPHRYPFLLVDKVVEFEAGKRIVGVKNVTANEPQFTGHFPDRPIMPGVLMVEAMAQLGGLVCLQQPVSDGKGEFFFAGIDGI 131
BLAST of mRNA_P-fluviatile_contig18.3203.1 vs. uniprot
Match: A0A0G4F2M0_9ALVE (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F2M0_9ALVE) HSP 1 Score: 148 bits (373), Expect = 4.250e-37 Identity = 79/140 (56.43%), Postives = 99/140 (70.71%), Query Frame = 1
Query: 148 RARSTLRSSSRCVPALEMGDEAAAAEGEARPGPTAADISKGIAHPEAVFTVPDNILKVLPHRYPFALVDKVLHFEPGKSIVGVKCITNNEPQFTGHFPDQPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 567
RA S RS R AL+ E A + E + + ++KG+ +A+F + + I +LPHRYPF LVDKV+ FEPGK VG+K + NEPQFTGHFP++ IMPGVLQVEAMAQLGG++CLQ+P SDG G FFFAGVDGV
Sbjct: 27 RAASLTRSGERMETALQ---ETAEGDAEWKGAEAVSGLTKGV---DAIFDI-EKIKTILPHRYPFLLVDKVIEFEPGKRAVGIKNVAMNEPQFTGHFPERAIMPGVLQVEAMAQLGGVVCLQDPVSDGTGDFFFAGVDGV 159
BLAST of mRNA_P-fluviatile_contig18.3203.1 vs. uniprot
Match: W7TUB8_9STRA (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUB8_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.090e-36 Identity = 87/164 (53.05%), Postives = 103/164 (62.80%), Query Frame = 1
Query: 76 LIAALCALLPETTAFVAPTNVARARARSTLRSSSRCVPALEMGDEAAAAEGEARPGPTAADISKGIAHPEAVFTVPDNILKVLPHRYPFALVDKVLHFEPGKSIVGVKCITNNEPQFTGHFPDQPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 567
L+AAL AL TAFV P A A V + GD A A E R G A+ +SK + +N+ +LPHRYPF LVDKV+ EPGK VG+K IT NEPQFTGHFP++PIMPGVL VEAMAQL G++CLQ P SDG+G FFFAG+DGV
Sbjct: 3 LLAALVALPAMCTAFVVPLPSAPKHA----------VRMMADGDAAGA---EWRGGQAASAVSKDLK----TLLTNENVASILPHRYPFLLVDKVIEMEPGKKAVGIKQITANEPQFTGHFPERPIMPGVLMVEAMAQLSGVLCLQPPVSDGKGLFFFAGIDGV 149
BLAST of mRNA_P-fluviatile_contig18.3203.1 vs. uniprot
Match: A0A0G4H2S5_VITBC (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H2S5_VITBC) HSP 1 Score: 147 bits (371), Expect = 1.120e-36 Identity = 74/110 (67.27%), Postives = 87/110 (79.09%), Query Frame = 1
Query: 238 PGPTAADISKGIAHPEAVFTVPDNILKVLPHRYPFALVDKVLHFEPGKSIVGVKCITNNEPQFTGHFPDQPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGV 567
P +AA +S+ + V + + I KVLPHRYPF LVDKV+ FEPGK VGVK I+ NEPQFTGHFP++ IMPGVLQ+EAMAQLGGL+CLQEP SDG+G FFFAGVDGV
Sbjct: 64 PWRSAASVSELTSDVPVVMDI-EAIRKVLPHRYPFLLVDKVIEFEPGKRAVGVKTISANEPQFTGHFPERAIMPGVLQIEAMAQLGGLVCLQEPLSDGKGDFFFAGVDGV 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3203.1 >prot_P-fluviatile_contig18.3203.1 ID=prot_P-fluviatile_contig18.3203.1|Name=mRNA_P-fluviatile_contig18.3203.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=256bp MVPSSCFALIAALCALLPETTAFVAPTNVARARARSTLRSSSRCVPALEMback to top mRNA from alignment at P-fluviatile_contig18:954927..957454- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig18.3203.1 ID=mRNA_P-fluviatile_contig18.3203.1|Name=mRNA_P-fluviatile_contig18.3203.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2528bp|location=Sequence derived from alignment at P-fluviatile_contig18:954927..957454- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig18:954927..957454- >mRNA_P-fluviatile_contig18.3203.1 ID=mRNA_P-fluviatile_contig18.3203.1|Name=mRNA_P-fluviatile_contig18.3203.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1536bp|location=Sequence derived from alignment at P-fluviatile_contig18:954927..957454- (Porterinema fluviatile SAG_2381)back to top |