mRNA_P-fluviatile_contig18.3155.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig18.3155.1
Unique NamemRNA_P-fluviatile_contig18.3155.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig18.3155.1 vs. uniprot
Match: A0A6H5KD56_9PHAE (SufE domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD56_9PHAE)

HSP 1 Score: 421 bits (1081), Expect = 1.330e-141
Identity = 238/319 (74.61%), Postives = 258/319 (80.88%), Query Frame = 1
Query:    1 MFTRTILLSAALVACIFSVGHAFVLRNAAGVSSGSFSSN--AETPRSRRPQRAA-----ESRPDVPLMAASTDLKELGLTPELERLTKMFRSCPTDKMRQMQLLHLAQMGEKMDPALQTEDNKVLGCLSTVYVAAEAKDGLVYYSTDSDAMITKGLAGLL-AKGLSGNTPEAIQTVKPEFIKAAGLQASLTAGRNNGFLNMLRTMKGKALALGGESAILAAAEQVAPAAAPVG-EEVEESGTMAARINEKLQALEPLKLQIMDESGGAESKFTIMVVSKFFEGLTTLKRHRSVYGLIADEMKIVHAVTLDTKTPDEVGM 930
            M  R  +LS AL   + SVG +FV  N A V  G+FSS+  A+  RSRRP           R D PLM+ STDLK+LGLTPELERLTK+FRSCPTDKMRQMQLLHL QMG+KMDPALQTE+NKVLGCLSTVYVAAE KDGL+YYSTDSDAMITKG A LL A GLSGN+PEAIQTVKPEFI+ AGLQASL AGRNNGF+NMLRTMKGKALALGGESAI AA EQ APAA     EE EESGTMA+R+ EKLQ LEPLKL I DESGG ESKF I +VSK FEGLT LKRHRSVYGL+ADEMKIVHAVTLDTKTP+E GM
Sbjct:    1 MVARAAILSVALSTSVCSVGESFVTPNVAVVPGGAFSSHRAAQAARSRRPAAXXXXXXRSGRDDAPLMSTSTDLKQLGLTPELERLTKVFRSCPTDKMRQMQLLHLTQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGSARLLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLAAGRNNGFINMLRTMKGKALALGGESAIRAAMEQAAPAAETAAPEEAEESGTMASRVTEKLQKLEPLKLVIEDESGGEESKFMIKIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEAGM 319          
BLAST of mRNA_P-fluviatile_contig18.3155.1 vs. uniprot
Match: A0A836CLM4_9STRA (Cysteine desulfuration protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLM4_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.410e-63
Identity = 134/260 (51.54%), Postives = 161/260 (61.92%), Query Frame = 1
Query:  178 LMAASTDLKELGLTPELERLTKMFRSCPTDKMRQMQLLHLAQMGEKMDPALQTEDNKVLGCLSTVYVAAEAKDGLVYYSTDSDAMITKGLAGLLAKGLSGNTPEAIQTVKPEFIKAAGLQASLTAGRNNGFLNMLRTMKGKALAL--GGESAILAAAEQVAPAAAPVGEEVEESGT-------MAARINEKLQALEPLKLQIMDESGGAESKFTIMVVSKFFEGLTTLKRHRSVYGLIADEMKIVHAVTLDTKTPDEVGM 930
            LM+ +  ++ELGLT ELERL K FRS P DKMR  QLL +A  G ++    +T DNKV GCLSTV+V A+ K G VY+  DSDA +TKGL  +L +GLSGN    IQ+VKPEFI+ AGLQ SLT GRNNGF+NML TMK KAL                          E ++ G        M   I  KLQAL P++LQ+ DES   E KF I VVS  FEGL  +KRH+ V+  IADEMK VHAV L TKTP E+G+
Sbjct:   60 LMSTAPSIQELGLTRELERLVKAFRSMPDDKMRYKQLLFMAAQGAELPSEFKTTDNKVQGCLSTVHVVAKMKQGKVYFEGDSDAQLTKGLLSILIRGLSGNAAADIQSVKPEFIQVAGLQTSLTPGRNNGFINMLSTMKRKALQAEXXXXXXXXXXXXXXXXXXXXADSEGDDMGVAEVPGKPMTTAIMRKLQALRPVRLQVEDESED-EQKFYIAVVSSAFEGLPLVKRHQLVHLTIADEMKQVHAVQLSTKTPAEMGL 318          
BLAST of mRNA_P-fluviatile_contig18.3155.1 vs. uniprot
Match: A0A7S1T9Y1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T9Y1_9RHOD)

HSP 1 Score: 182 bits (462), Expect = 1.580e-49
Identity = 119/256 (46.48%), Postives = 153/256 (59.77%), Query Frame = 1
Query:  196 DLKELGLTPELERLTKMFRSCPTDKMRQMQLLHLAQMGEKMDPALQTEDNKVLGCLSTVYVAAEAK-DGLVYYSTDSDAMITKGLAGLLAKGLSGNTPEAIQTVKPEFIKAAGLQASLTAGRNNGFLNMLRTMKGKALALGGESAILAAAEQVAPAAAPVGEE--VEESGTMAARINEKLQALEPLKLQIMDES-----------GGAESKFTIMVVSKFFEGLTTLKRHRSVYGLIADEMKI-VHAVTLDTKTPD 918
            +L  LGLTPELERLT+ F   P  KMR  QLL +AQ    MD +L T +NKV GCLSTVYV A    DG V+   DSDA +TKGL  LL +GL G T E I+ V PEFI+A+GL  SLT GRNNGFLNML  +K KA A      I +  E ++    PV E     ++G +  RI +KL  L+P +L I D+S              E+ F+I + S  FE LT ++RHR +Y L+A E+   VHA+ +D +TP+
Sbjct:   46 ELDALGLTPELERLTRQFSMVPDPKMRYQQLLFMAQELPSMDTSLMTSENKVPGCLSTVYVHASRNGDGTVHLVGDSDAQLTKGLIALLIQGLDGKTVEEIERVSPEFIQASGLAVSLTPGRNNGFLNMLAKIKAKARAC-----IDSPVEVLSATPDPVVERNIPPDAGPIYRRIAQKLSVLKPTELVISDKSKQHSGHPGNLQAKTETHFSIRIRSTAFEPLTPVQRHRVIYTLLAQELNDGVHALQIDAQTPN 296          
BLAST of mRNA_P-fluviatile_contig18.3155.1 vs. uniprot
Match: M2XAG5_GALSU (Cysteine desulfuration protein SufE (Plastid) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XAG5_GALSU)

HSP 1 Score: 182 bits (462), Expect = 3.590e-49
Identity = 116/266 (43.61%), Postives = 157/266 (59.02%), Query Frame = 1
Query:  196 DLKELGLTPELERLTKMFRSCPTDKMRQMQLLHLAQMGEKMDPALQTEDNKVLGCLSTVYVAAEAKDGLVYYSTDSDAMITKGLAGLLAKGLSGNTPEAIQTVKPEFIKAAGLQASLTAGRNNGFLNMLRTMKGKALA----LGGES------AILAAAEQVAPAAAPVGEEVEESGTMAARINEKLQALEPLKLQIMDES------------GGAESKFTIMVVSKFFEGLTTLKRHRSVYGLIADEMKI-VHAVTLDTKTPDEV 924
            D K+LGLTPEL RL K F + P  K+R  QLL+LAQ  E +    +T +NKV GCLSTV+V  +  +  +++  DSDA +TKGL  LL KGL+G T E I+ + PEF+  AGL  SLT GRNNGFLNML+TMK KA      L G S      +      Q +P+ A        SG + + I EKLQ L+P +L++ D+S              +E+ F++ VVS  F GL+ +KRH+ VY L+  E+K  +HA+ +  KTP EV
Sbjct:   64 DEKKLGLTPELARLVKSFAAAPDPKLRVQQLLYLAQTLEPLPFQYKTNENKVPGCLSTVHVVGDCDNEKIFFKGDSDAQLTKGLLALLIKGLNGCTVEEIERISPEFVTVAGLSVSLTPGRNNGFLNMLQTMKNKAKEAASKLNGVSREGRNYSDRVPKTQASPSTAETA-----SGPIYSAIVEKLQKLKPSRLEVHDDSFQHAGHVGAKGLRSSETHFSVYVVSDAFVGLSLVKRHQLVYTLLGQELKEGLHALRIQAKTPSEV 324          
BLAST of mRNA_P-fluviatile_contig18.3155.1 vs. uniprot
Match: A0A8J5XHT0_DIALT (SufE domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XHT0_DIALT)

HSP 1 Score: 177 bits (448), Expect = 1.500e-47
Identity = 116/264 (43.94%), Postives = 158/264 (59.85%), Query Frame = 1
Query:  178 LMAASTDLKELGLTPELERLTKMFRSCPTDKMRQMQLLHLAQMGEKMDPALQTEDNKVLGCLSTVYVAAEA-KDGLVYYSTDSDAMITKGLAGLLAKGLSGNTPEAIQTVKPEFIKAAGLQASLTAGRNNGFLNMLRTMKGKALALGGESAILAAAEQVAPAAAPVGEEVEESGTMAAR--INEKLQALEPLKLQIMDESG------------GAESKFTIMVVSKFFEGLTTLKRHRSVYGLIADEMK-IVHAVTLDTKTPDE 921
            LM+AS     LGLTPELE++ ++F+  P  K+R  QLL LAQ  + MD  L+  +NKV GCLSTV+V A A   G ++Y+ DSDAM+TKGL  LL  GLSG+T + I  V P+FI+ AG+ ASLT GRNNG LNML  MK KA AL G  A+ +      P+A+P    VE  G   A   I + L  L+P  +++ D S              +E+ F + VVS  F GL+ ++RH+ +Y L+A+EM   VHA+ +  +T  E
Sbjct:   35 LMSAS-----LGLTPELEQVVEVFKMVPDQKLRYQQLLFLAQKAKPMDAVLKVPENKVPGCLSTVFVHATADSSGNIFYTGDSDAMLTKGLVVLLTDGLSGHTADEILAVDPKFIQEAGIAASLTPGRNNGLLNMLALMKQKAKALAGV-AVPSGPSAANPSASPPAPVVEGGGAPVADSIIGKVLAKLKPTTVRLRDNSAQHAGHAGREGLAASETHFALEVVSDVFSGLSLVQRHQLIYALLAEEMAGSVHALQITARTTAE 292          
BLAST of mRNA_P-fluviatile_contig18.3155.1 vs. uniprot
Match: A0A7S3Q629_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q629_9STRA)

HSP 1 Score: 174 bits (440), Expect = 4.180e-46
Identity = 106/279 (37.99%), Postives = 161/279 (57.71%), Query Frame = 1
Query:  181 MAASTDLKELGLTPELERLTKMFRSCPTDKMRQMQLLHLAQMGEKMDPALQTEDNKVLGCLSTVYVAAEAKDG-----LVYYSTDSDAMITKGLAGLLAKGLSGNTPEAIQTVKPEFIKAAGLQASLTAGRNNGFLNMLRTMKGKALAL-------GGESA------ILAAAEQVAPAAAPVGEEVEESGTMAARINEKLQALEPLKLQIMDESGG-------------AESKFTIMVVSKFFEGLTTLKRHRSVYGLIADEMKIVHAVTLDTKTPDEV 924
            MA +++++ LGLTPELE++TK F S P +K+R  QLL++A   + +DP L   +NKV GCLSTVYV   A+D      ++ +  DSD  +TKGL  LL +G+SG T E IQ V PEFI AA +  SLT GRNNGFLNML  MK KA +        GGE A      ++++ +++A               M   + E L  L+P+ L+++D+S                ES F + +V++ F+G+  +KRH+ +Y ++ + M  +HA++++ K P +V
Sbjct:   50 MADTSEIEALGLTPELEKMTKAFGSIPDEKLRYKQLLYMANQLKPLDPKLMVSENKVPGCLSTVYVDCTARDNEEGETVLDFVGDSDGQLTKGLVALLVRGMSGCTAEQIQKVDPEFINAAKITQSLTPGRNNGFLNMLAVMKAKATSYSVGADNSGGEEADADTEGVISSFDEIA------------GKPMYNDMMESLLKLKPVTLELIDDSASHAGHAGSKGWEESGESHFVLNMVAEVFDGMPLVKRHQLIYLVLGETMDKIHALSINAKAPSQV 316          
BLAST of mRNA_P-fluviatile_contig18.3155.1 vs. uniprot
Match: A0A7S4I3L9_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3L9_9STRA)

HSP 1 Score: 171 bits (434), Expect = 6.870e-45
Identity = 111/271 (40.96%), Postives = 150/271 (55.35%), Query Frame = 1
Query:  190 STDLKELGLTPELERLTKMFRSCPTDKMRQMQLLHLAQMGEKMDPALQTEDNKVLGCLSTVYVAA------EAKDGLVYYSTDSDAMITKGLAGLLAKGLSGNTPEAIQTVKPEFIKAAGLQASLTAGRNNGFLNMLRTMKGKALALGGESAILAAAE-------QVAPAAAPVGEEVEESGTMAARINEKLQALEPLKLQIMDESG-------------GAESKFTIMVVSKFFEGLTTLKRHRSVYGLIADEMKIVHAVTLDTKTPDEV 924
            +T    LGLTPEL R+T  F S P +KMR  QLL +A     + P     +NKV GCLSTVYV A      E  + +V +  +SD ++TKGL  LL +GLSG T E +Q V PEFI  A +  SLT GRNNGFLNML  MK KA  +GG  A  A  +       +   AA    EEVE      A + +    L+P  ++++D S                ES F+I +V++ F+GL+ +KRH+ VY L+ D M+ +HA+ +  +TPDEV
Sbjct:   76 ATTADPLGLTPELRRMTDAFASIPDEKMRYKQLLFMANQLPAISPDAMVPENKVPGCLSTVYVDAVMERDEERGEDVVKFLGESDGLLTKGLVALLVRGLSGCTAEEVQRVNPEFIHEAKISQSLTPGRNNGFLNMLAVMKKKAAEIGGPEAAAAGDDAGSVEEGEDEVAATLTFEEVEGKPMYNAMMAKLTTMLKPTSIELVDNSDQHAGHAGSKGWEESGESHFSINIVAEAFDGLSLVKRHQLVYMLLGDIMQKIHALQIVARTPDEV 346          
BLAST of mRNA_P-fluviatile_contig18.3155.1 vs. uniprot
Match: A0A4D9DCV6_9STRA (SufE domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCV6_9STRA)

HSP 1 Score: 169 bits (427), Expect = 2.490e-44
Identity = 110/260 (42.31%), Postives = 152/260 (58.46%), Query Frame = 1
Query:  187 ASTDLKE--LGLTPELERLTKMFRSCPTDKMRQMQLLHLAQMGEKMDPALQTEDNKVLGCLSTVYVAAEAKDGLVYYSTDSDAMITKGLAGLLAKGLSGNTPEAIQTVKPEFIKAAGLQASLTAGRNNGFLNMLRTMKGKALALGGESAILAAAEQVAPAAAPVGEEVEESGTMAARINEKLQALEPLKLQIMDESG-----------GAESKFTIMVVSKFFEGLTTLKRHRSVYGLIADEMKIVHAVTLDTKTPDEVG 927
            +STD+ E  LGLTP L  +++ F+    ++ R   LL LA   + M    +  +NKV GCLSTVYV A  +DG VY+  DSDA +TKGL  LL +G+SG + E IQ VKPEFIK AG+ ASLT GRNNGFLNML  +K KA+    +       E        +   V  S  M   IN     L+P +L++ D+S            G ES F++ +V+  FEGL+ ++RH+ VY ++A EM+ +HA+++D KTP E G
Sbjct:   57 SSTDIDESSLGLTPRLFEVSRAFQLMD-ERTRVQNLLALASSMKPMKDFRKLPENKVPGCLSTVYVHAFMQDGKVYFEGDSDAQLTKGLVALLIEGMSGCSAEEIQAVKPEFIKYAGIAASLTPGRNNGFLNMLAMLKRKAVEAESKGEGAGQEEPAVEFQEDIARPVY-SSCMKKLIN----FLKPKRLEMQDDSAQHAGHAGAKGLGGESHFSLRIVADCFEGLSLVQRHKLVYTVLAAEMQQIHALSIDAKTPAEAG 310          
BLAST of mRNA_P-fluviatile_contig18.3155.1 vs. uniprot
Match: A0A1Z5K9T0_FISSO (SufE domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9T0_FISSO)

HSP 1 Score: 166 bits (420), Expect = 8.550e-44
Identity = 108/252 (42.86%), Postives = 143/252 (56.75%), Query Frame = 1
Query:  214 LTPELERLTKMFRSCPTDKMRQMQLLHLAQMGEKMDPALQTEDNKVLGCLSTVYV---AAEAKDGLVY--YSTDSDAMITKGLAGLLAKGLSGNTPEAIQTVKPEFIKAAGLQASLTAGRNNGFLNMLRTMKGKALALGGESAILAAAEQVAPAAAPVGEEVEESGTMAARINEKLQALEPLKLQIMD----------ESGGAESKFTIMVVSKFFEGLTTLKRHRSVYGLIADEMKIVHAVTLDTKTPDEV 924
            LTPEL ++   F S   DK+R  QLL++A     +DP+    +NKV GCLSTVYV   A +  DG++   +  DSD ++TKGL  LL +GLSGNT E IQ V P FI+  G+ ASLT GRNNGFLNML  MK KA  L         +E     A   G+E      M   I + LQAL+P+ L++ D           S   E+ F + +V+  FEGL  +KRH+ VY L+ D M  +HA+ +  KTP+EV
Sbjct:   24 LTPELLKIANAFESIGDDKLRYKQLLYMATQLSPIDPSQAIPENKVPGCLSTVYVDGTAVDKGDGVIRIEFVGDSDGLLTKGLVALLVRGLSGNTAEDIQNVDPGFIQKTGIAASLTPGRNNGFLNMLNVMKIKAKQLEANYQATGPSESATTTA---GDEK----PMYQAIVQGLQALKPVSLKLEDVSYQHAGHREASKDGETHFNLEIVASAFEGLNLVKRHKLVYMLLGDVMPRIHALQISAKTPEEV 268          
BLAST of mRNA_P-fluviatile_contig18.3155.1 vs. uniprot
Match: A0A7S2ZLB0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLB0_9RHOD)

HSP 1 Score: 165 bits (417), Expect = 3.970e-43
Identity = 110/262 (41.98%), Postives = 143/262 (54.58%), Query Frame = 1
Query:  178 LMAASTDLKELGLTPELERLTKMFRSCPTDKMRQMQLLHLAQMGEKMDPALQTEDNKVLGCLSTVYVAAEAKDGL--VYYSTDSDAMITKGLAGLLAKGLSGNTPEAIQTVKPEFIKAAGLQASLTAGRNNGFLNMLRTMKGKALALGGESAILAAAEQVAPAAAPVGEEVEESGTMAARINEKLQALEPLKLQIMDES--------GGAESKFTIMVVSKFFEGLTTLKRHRSVYGLIADEMKI----VHAVTLDTKTPDE 921
            + AA  ++  L LTP LE++    +  P  K+R  QLLH A     M+P L+TE NKV GCLSTV+V AE       VY+  DSDA +TKGL  +L  GLSG+T   I+ V P+FIKA+GL  SLT GRNNGF+NML+ MK KA  L  E+A L            V  EV      A  I   L  L P++L++ D S         G E+   I VVS+ FE +  + RH+ +Y L+   M      VHA+ +DTK P E
Sbjct:   30 MTAADVEMSSLNLTPALEKMVSSLKMFPDSKVRYQQLLHYASTLGPMEPELKTEMNKVPGCLSTVFVHAEMNPDTRKVYFKGDSDAQLTKGLVSMLVNGLSGSTALQIEKVNPDFIKASGLTVSLTPGRNNGFINMLKLMKRKAAVLDEEAAGLGPRSTGQTDEDAVEFEVP-GKPRATAIGRALMQLNPIELEVEDFSESHKGHAHAGDETHIRIKVVSEAFEDMPLVLRHKVIYTLLDSFMDKGSGGVHALQMDTKAPGE 290          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD56_9PHAE1.330e-14174.61SufE domain-containing protein n=3 Tax=Ectocarpus ... [more]
A0A836CLM4_9STRA1.410e-6351.54Cysteine desulfuration protein n=1 Tax=Tribonema m... [more]
A0A7S1T9Y1_9RHOD1.580e-4946.48Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2XAG5_GALSU3.590e-4943.61Cysteine desulfuration protein SufE (Plastid) n=1 ... [more]
A0A8J5XHT0_DIALT1.500e-4743.94SufE domain-containing protein n=1 Tax=Diacronema ... [more]
A0A7S3Q629_9STRA4.180e-4637.99Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4I3L9_9STRA6.870e-4540.96Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A4D9DCV6_9STRA2.490e-4442.31SufE domain-containing protein n=2 Tax=Monodopsida... [more]
A0A1Z5K9T0_FISSO8.550e-4442.86SufE domain-containing protein n=2 Tax=Fistulifera... [more]
A0A7S2ZLB0_9RHOD3.970e-4341.98Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig18contigP-fluviatile_contig18:490035..495377 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score441.0
Seed ortholog evalue4.5e-121
Seed eggNOG ortholog2880.D7G7R0
Preferred namebola1
KEGG koko:K22066
EggNOG free text desc.protein maturation by iron-sulfur cluster transfer
EggNOG OGsCOG0271@1,KOG2313@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptioncysteine desulfuration protein
Ec32 orthologEc-06_000700.1
Exons4
Model size1665
Cds size933
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig18.3155.1prot_P-fluviatile_contig18.3155.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig18 490035..494645 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815754.9345958-CDS-P-fluviatile_contig18:490034..4903901622815754.9345958-CDS-P-fluviatile_contig18:490034..490390Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 490035..490390 +
1693563199.5399692-CDS-P-fluviatile_contig18:490034..4903901693563199.5399692-CDS-P-fluviatile_contig18:490034..490390Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 490035..490390 +
1622815754.9468446-CDS-P-fluviatile_contig18:490888..4910861622815754.9468446-CDS-P-fluviatile_contig18:490888..491086Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 490889..491086 +
1693563199.551495-CDS-P-fluviatile_contig18:490888..4910861693563199.551495-CDS-P-fluviatile_contig18:490888..491086Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 490889..491086 +
1622815754.9582615-CDS-P-fluviatile_contig18:491441..4916091622815754.9582615-CDS-P-fluviatile_contig18:491441..491609Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 491442..491609 +
1693563199.945131-CDS-P-fluviatile_contig18:491441..4916091693563199.945131-CDS-P-fluviatile_contig18:491441..491609Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 491442..491609 +
1622815754.9686542-CDS-P-fluviatile_contig18:494434..4946451622815754.9686542-CDS-P-fluviatile_contig18:494434..494645Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 494435..494645 +
1693563199.958483-CDS-P-fluviatile_contig18:494434..4946451693563199.958483-CDS-P-fluviatile_contig18:494434..494645Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 494435..494645 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815754.9819646-UTR-P-fluviatile_contig18:494645..4953771622815754.9819646-UTR-P-fluviatile_contig18:494645..495377Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 494646..495377 +
1693563199.969486-UTR-P-fluviatile_contig18:494645..4953771693563199.969486-UTR-P-fluviatile_contig18:494645..495377Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 494646..495377 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig18.3155.1

>prot_P-fluviatile_contig18.3155.1 ID=prot_P-fluviatile_contig18.3155.1|Name=mRNA_P-fluviatile_contig18.3155.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=311bp
MFTRTILLSAALVACIFSVGHAFVLRNAAGVSSGSFSSNAETPRSRRPQR
AAESRPDVPLMAASTDLKELGLTPELERLTKMFRSCPTDKMRQMQLLHLA
QMGEKMDPALQTEDNKVLGCLSTVYVAAEAKDGLVYYSTDSDAMITKGLA
GLLAKGLSGNTPEAIQTVKPEFIKAAGLQASLTAGRNNGFLNMLRTMKGK
ALALGGESAILAAAEQVAPAAAPVGEEVEESGTMAARINEKLQALEPLKL
QIMDESGGAESKFTIMVVSKFFEGLTTLKRHRSVYGLIADEMKIVHAVTL
DTKTPDEVGM*
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mRNA from alignment at P-fluviatile_contig18:490035..495377+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig18.3155.1 ID=mRNA_P-fluviatile_contig18.3155.1|Name=mRNA_P-fluviatile_contig18.3155.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5343bp|location=Sequence derived from alignment at P-fluviatile_contig18:490035..495377+ (Porterinema fluviatile SAG_2381)
ATGTTCACACGCACGATATTACTATCAGCAGCATTGGTAGCTTGCATTTT CTCCGTCGGCCATGCATTCGTGTTACGAAATGCCGCGGGAGTGTCAAGCG GGTCGTTCTCGTCAAACGCGGAAACCCCACGCTCGAGAAGACCACAACGT GCTGCCGAATCAAGACCCGACGTCCCGCTGATGGCGGCGTCGACGGACTT GAAGGAGTTGGGATTGACCCCAGAGCTGGAGCGATTGACCAAGATGTTCA GATCGTGCCCCACCGACAAGATGAGACAGATGCAGCTGTTGCACCTTGCC CAAATGGGGGAAAAGATGGACCCAGCCCTCCAGACGGAGGACAACAAGGT GTTGGGGTGAGCTACTACTATACACCTACTGCTTGTATTCCGGAGATAGA AATCAATGAGGATGTTCGGCGAAGGGTGTACAGCTCCAGCTGGCCATGAA AGCGCGTTCTTTTTGCCAAAAAAACGCAGAATTCATGTGTGACGTCCTTC ATGTGTCGGCCGCGTCGCCGAGCGAGTCAGGGGAAAGAGGCAGCGGTCAG TTAGCCTGGTCGCACTAAGGTTGTGATAGACTCTGCGCCGCGCTTGGCTT TCACATGGACACGAAACATAGGGTATGCGCACAGCGCGGTCGCAGATACA TTGATCTACTTGTCGTAAAATCGAAGTTTGTAGACGAAAACTAAGCTGAT GTAGCCCGAGCGAGAAGTGGATAGTCTAGCCTACAGAAAGTACTCCCGGA TGTCCACGCACTTCCATCCGGTCAGGATCGACTCCGTGATCTCTTGTCAG CACAGCTTTGTTTTCATGCAGCCTTGCTTTCCGTTGGGTTTGCACTTTTC CCAGATGCCTCTCCACGGTGTACGTCGCGGCGGAGGCTAAGGACGGCCTC GTCTACTACTCCACGGACTCGGACGCGATGATCACGAAGGGCCTGGCCGG CCTCCTAGCGAAGGGGCTGTCGGGCAACACGCCGGAGGCTATCCAGACCG TAAAGCCGGAATTCATCAAAGCGGCCGGTCTCCAGGCCAGCCTCACTGCT GGGTACTTTTGAGTCTGATCGCCGCCGCTGTGTGTGTGCGTGTGTCATAA ACTTGTTGCGATATGTATGTGTTGATGTTCAAATTTCTTTCTTCAGATGC TCCAGGCTCTCACGTCCCGGGGCGTTGGGTGCCGGCCTGGAACGACTTGT CGATAGCAATGGTGGTAACTGGGTTGCAAACGCCACTGCTTTCCCCCCAT GCCGTCCCAAGAAGGGCCAAACATCAAACGTTGAAGACAGAAAAAAGCCA CGCATGATCTTGCATCACATGACGATGCTCACATGAAAACGCCCGACCTG CACTGCCGTTTTTCATGTGCTGTACACTAACGCCCTGATGCCTCTGCTGA ACACCAGGCGAAACAACGGATTCCTCAACATGCTGCGAACGATGAAGGGG AAGGCGCTCGCGTTAGGCGGCGAATCAGCCATCCTCGCTGCCGCGGAGCA AGTTGCGCCGGCGGCAGCGCCGGTAGGGGAGGAAGTCGAGGAAAGCGGGA CGATGGCGGCCCGGATAAACGAAAAGTGAGTAGGACGAGGACAACAAACG GCGGCTATTGCCGTCGTGTCACATCGCAAGCTACCGCCTCCTTCCGACCG TTACTGACATGGACTAGGTCTTGAGCTACAGCAAGACCGCCGCGCACACA TTTAATGCGATGCTCTGGTCGGCTCTGATTTGTAACCGTTCGCGGAGCGT TTAAATCCTCGATCGAGATCTCGGATGCTTTCGCTTAGTCCGCACCAAGC CCTCCTCTTCCTCCAAATGACCTTTATTCTGGTGCGGTCCACGTTTTTTC CCGTATCTAATTATGTTTCTCTTTCCAGCGATTTGTTCATCAAAGAAAAT GAAAAAGGACACAAGTGGTGAGTCGAGAAGAGCAGAGAACAGAATGGGAG AGAAGAGAAGAACAGAGAAGAGAAGAGAATCTAGAGGAAACACAGCCAAG TCCGGATCGACTCGACGATGGACGGAGAAGTAGTAACAGCCTAACATCTA TGTTGAGGATGGGGCTTTCGTTGAGGATGAATAGCACGCGGAAATGTCTC CAGCAACTGGAAAAATATTTTTCCGCAGGAACATTTGTATGGTGAAGTGT GCGGGCCGAGAGTATTCTGCGTGTGTAAAAGTACGAGCATTCGGCGCTGC GTGAAGCAAGAAGAAGCAGCAGCAGCAAGCAGAGACAACCAAGCAGAAGG AACTGTACTCTGTTGTGCTCAAAACGACGCACGCCTGTCGCGAACTTAAA GCCTCGATCGACGTGAATTCTTTGTTGTTCACGTTTGTTTGTCCCGGGAG CAATACTACCTCGCTTTTATTTAGAAATGGGCATCATTCAATCATTATTG GGGAGGTCTCTTGTCATCATCATCTCTGCCTCGAGTTCACACAAGATTTT TACTCCGCATCTCATGGCCTCCTCCTCTATCAAGTCATGGTCTCGTCAAC ACCTCCACCACGACGACCACACACAGTGCTACTATCATCATCGTCAATTA GCGTATTCGTGGAGCCAGAAGAAGACAATGATAACTACATGCTGGAAGAC AAAGAAGACGGAGGGGATACCGAAACTCACTCACACTTCTACCTACGACG GGTCCGAAAGTGTGCAGCTGTCAACCGAACTCGAGTGTTTTGCTGGGTAA GCTGCGAGTCTGAGTGCGGTCTCTTTCGCACCCCTTTACTGCCACTTCCT CTGTCCGCGTCAAGTGCGGGCTCTTCCACGGCATCCTGAAAAGAATTTTC CCTTCTTCTTGCCCCTGCACTGGTGGACGATCCTCCTCCCTCTTCCCACC ATCACCTCCCCCGTGGCCTACTCGTCCGAACGCGCCCCAGCTCTTGGTCG TGTTCAGCGCTCTCGACGTGTGAAAACCTTTGTTGAGAACGGCAGAAAGA TTCCAAAAGGGTCCTGAAGGTGCTAAGGTCTGTTGTTGGAGACAGAGGCA GTGCGAGCAGTAAGCGAGGAGCACAGGAGGGAGAGGAGAGGGGGATGGGG GGTGGGATTGGTCAGTATGGATGCCCTGGCATCATGGAGGACGAGAACGA GTCTGGAGAACAACAGCCGGAGAACGAGTCCGAGAGCGCTGAACACGACC AAGAGCTGGGGCGCGTTCGGACGAGTAGGCCACGGGGAGGTGATGGTGGG GAAGAGGGAGGAGGATCGTCCACCAGTGCAGGGGCAAGAAGAAGGGAAAA TTCTTTTCAGGATGCCGTGGAAGAGCCCGCACTTGACGCGGACAGAGGAA GTGGCAGTAAAGGGGTGCGAAAGAGACCGCACTCAGACTCGCAGCTTACC CAGCAAAACACTCGAGTTCGGTTGACAGCTGCACACTTTCGGACCCGTCG TAGGTAGAAGTGTGAGTGAGTTTCGGTATCCCCTCCGTCTTCTTTGTCTT CCAGCATGTAGTTATCATTGTCTTCTTCTGGCTCCACGAATACGCTAATT GACGATGATGATAGTAGCACTGTGTGTGGTCGTCGTGGTGGAGGTGTTGA CGAGACCATGACTTGATAGAGGAGGAGGCCATGAGATGCGGAGTAAAAAT CTTGTGTGAACTCGAGGCAGAGATGATGATGACAAGAGACCTCCCCAATA ATGATTGAATGATGCCCATTTCAAAATAAAAGCGAGGTAGTATTGCTCCC GGGACAAACAAACGTGAACAACAAAGAATTCACGTCGATCGAGGCTTTAA GTTCGCGACAGGCGTGCGTCGTTTTGAGCACAACAGAGTACAGTTCCTTC TGCTTGGTTGTCTCTGCTTGCTGCTGCTGCTTTTTCTTGCTTCACGCAGC GCCGAATGCTCGTACTTTTACACACGCAGAATACTCTCGGCCCGCACACT TCACCATACAAATGTTCCTGCGGAAAAATATTTTTCCAGTTGCTGGAGAC ATTTCCGCGTGCTATTCATCCTCAACGAAAAGCCCCATCCTCAACATAGA TGTTAGGCTGTTTAGTCCGTTCGAGATCTCATGTGGTGCGCTTGTGCCGG TTTTGCCGCGCACGCGACCACACACCTAGGGGCATTCCACTCCTGGAAGC TGCCTGGTGTAGCTCGTCTTACATGCCCGGGTGGCCGACGGCAAACATTC ACCCTCCTCCAAAAAAGTGTGCCGCCGACGATGGGTCCTCTTGGCAGAAG GGTCCGCGCCATGCACGAACAAGCAAGGCTACTGTGGGTTATGATTCGCT GATGTGGGATACTCCACATGGTAGACTCAATGAATCTTGCTCGAGCCGGC CCAAGTGGCACAATTGTTGACGAATATCTAGAGGGCCGTTTCCGTTCAAT CTAACAGCACGTGCGCATACCTTGCAATGGGCTCGTTTTGTTTGCCGCAG GCTACAGGCGCTCGAGCCCCTAAAGCTGCAAATTATGGACGAGTCCGGGG GCGCGGAGTCCAAATTTACGATTATGGTGGTCAGCAAGTTCTTTGAAGGC CTGACGACGCTGAAGCGGCACCGATCTGTGTACGGCCTGATTGCCGACGA GATGAAAATCGTGCACGCGGTTACCCTAGACACAAAAACGCCCGACGAGG TGGGCATGTAAAATCTCGCAGCAGGGGCCTCCAGCGCACGATGTTTTGCC TTGACTGATCCTGGCAGCAAGCTTACCGCCCGGGCGTAATCTGGGTGATG GGATGCTCTGTCGAGCGGGCTTTGATGGCTCGCGCGTCTCGGTATTTGCC TGTGTTTGCTGTCGTCTTTTTCTTTGCTTTGTGTCGTGGACGTTGTCGAG TTCAATCGCTGTAAGGTTTGGCGTTGCTTTGACGCACGTGGAGCTTTGTC TGAACTGGGATGTGCTTGTCTGTAACCATGTTGCGCATTAGACCCACCTA GATTTGTGAAATTGGAGCCGGAGCCTTTCTGGCAGGTACACGGGTGATTT CGGAATTTCCATTTTGTCCCCACATCATACGGTTGACCGTCGGGTACTGA TCTCGCTTTGGTTTTTGTTTTCAATGTTGCTCTGTTGTACCTGACGGCTT GAACCGCTGTAGTCCATGCGAAGATTCTAGACGGGCAACATTGTGGAACC AAGTGGTTTTTTCTCAAAGGTGGTATGAACCACATATGGATACCAGGACT TCCGACGGAAGCTGTCGATCGAGCTGGCCGCGCCAAGTCGGTGGAAAATC CGACCGTCGAGCTGTACTCGCATGAAATTCGCATCTGCAGGAATCTGTAA ATCACGCGAAGTGGAAGCGGTTGAGCTATAACTTCCTTTTCAGTAAGTGC CATAGAGGCTTTGGTAAAAAGGTATACAGATTTTTTTTTTCTC
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Coding sequence (CDS) from alignment at P-fluviatile_contig18:490035..495377+

>mRNA_P-fluviatile_contig18.3155.1 ID=mRNA_P-fluviatile_contig18.3155.1|Name=mRNA_P-fluviatile_contig18.3155.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1866bp|location=Sequence derived from alignment at P-fluviatile_contig18:490035..495377+ (Porterinema fluviatile SAG_2381)
ATGTTCACACGCACGATATTACTATCAGCAGCATTGGTAGCTTGCATTTT
CTCCGTCGGCCATGCATTCGTGTTACGAAATGCCGCGGGAGTGTCAAGCG
GGTCGTTCTCGTCAAACGCGGAAACCCCACGCTCGAGAAGACCACAACGT
GCTGCCGAATCAAGACCCGACGTCCCGCTGATGGCGGCGTCGACGGACTT
GAAGGAGTTGGGATTGACCCCAGAGCTGGAGCGATTGACCAAGATGTTCA
GATCGTGCCCCACCGACAAGATGAGACAGATGCAGCTGTTGCACCTTGCC
CAAATGGGGGAAAAGATGGACCCAGCCCTCCAGACGGAGGACAACAAGGT
GTTGGGATGTTCACACGCACGATATTACTATCAGCAGCATTGGTAGCTTG
CATTTTCTCCGTCGGCCATGCATTCGTGTTACGAAATGCCGCGGGAGTGT
CAAGCGGGTCGTTCTCGTCAAACGCGGAAACCCCACGCTCGAGAAGACCA
CAACGTGCTGCCGAATCAAGACCCGACGTCCCGCTGATGGCGGCGTCGAC
GGACTTGAAGGAGTTGGGATTGACCCCAGAGCTGGAGCGATTGACCAAGA
TGTTCAGATCGTGCCCCACCGACAAGATGAGACAGATGCAGCTGTTGCAC
CTTGCCCAAATGGGGGAAAAGATGGACCCAGCCCTCCAGACGGAGGACAA
CAAGGTGTTGGGATGCCTCTCCACGGTGTACGTCGCGGCGGAGGCTAAGG
ACGGCCTCGTCTACTACTCCACGGACTCGGACGCGATGATCACGAAGGGC
CTGGCCGGCCTCCTAGCGAAGGGGCTGTCGGGCAACACGCCGGAGGCTAT
CCAGACCGTAAAGCCGGAATTCATCAAAGCGGCCGGTCTCCAGGCCAGCC
TCACTGCTGGATGCCTCTCCACGGTGTACGTCGCGGCGGAGGCTAAGGAC
GGCCTCGTCTACTACTCCACGGACTCGGACGCGATGATCACGAAGGGCCT
GGCCGGCCTCCTAGCGAAGGGGCTGTCGGGCAACACGCCGGAGGCTATCC
AGACCGTAAAGCCGGAATTCATCAAAGCGGCCGGTCTCCAGGCCAGCCTC
ACTGCTGGGCGAAACAACGGATTCCTCAACATGCTGCGAACGATGAAGGG
GAAGGCGCTCGCGTTAGGCGGCGAATCAGCCATCCTCGCTGCCGCGGAGC
AAGTTGCGCCGGCGGCAGCGCCGGTAGGGGAGGAAGTCGAGGAAAGCGGG
ACGATGGCGGCCCGGATAAACGAAAAGCGAAACAACGGATTCCTCAACAT
GCTGCGAACGATGAAGGGGAAGGCGCTCGCGTTAGGCGGCGAATCAGCCA
TCCTCGCTGCCGCGGAGCAAGTTGCGCCGGCGGCAGCGCCGGTAGGGGAG
GAAGTCGAGGAAAGCGGGACGATGGCGGCCCGGATAAACGAAAAGCTACA
GGCGCTCGAGCCCCTAAAGCTGCAAATTATGGACGAGTCCGGGGGCGCGG
AGTCCAAATTTACGATTATGGTGGTCAGCAAGTTCTTTGAAGGCCTGACG
ACGCTGAAGCGGCACCGATCTGTGTACGGCCTGATTGCCGACGAGATGAA
AATCGTGCACGCGGTTACCCTAGACACAAAAACGCCCGACGAGGTGGGCA
TGTAAGCTACAGGCGCTCGAGCCCCTAAAGCTGCAAATTATGGACGAGTC
CGGGGGCGCGGAGTCCAAATTTACGATTATGGTGGTCAGCAAGTTCTTTG
AAGGCCTGACGACGCTGAAGCGGCACCGATCTGTGTACGGCCTGATTGCC
GACGAGATGAAAATCGTGCACGCGGTTACCCTAGACACAAAAACGCCCGA
CGAGGTGGGCATGTAA
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