mRNA_P-fluviatile_contig18.3147.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig18.3147.1
Unique NamemRNA_P-fluviatile_contig18.3147.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig18.3147.1 vs. uniprot
Match: D7G7R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7R8_ECTSI)

HSP 1 Score: 731 bits (1886), Expect = 3.790e-255
Identity = 388/457 (84.90%), Postives = 412/457 (90.15%), Query Frame = 2
Query:  404 ATARGQRAAFSSADGAGGGLVPKNKAEQAQAGMDAETRRSIGEGDKKSKKSMKTVK-----------------------------LALAGNLIITLGKFLAYLHSGSSAMSSEAMHSLVDSANQLLLLVGLRSAATAPDNRHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEELVNPTVALDKVGMEVWSVLGLSLLIDGFVLVKTFESIWKSKPKNVSLKKHLKDIRDPTTLAVLLEDGGACLGVLMAIGGIGLSQYYHSPVFDSLAGVSIAGLLGIMGLVLTEVNRRFLIGQSVDAETTEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRYGQEFRQLLARPPDDKTKYKDLETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAFIELEPDSSTHDMFALEQFQTPALRKVEETTLNQMLANLVIAKKAA 1687
            A AR Q+ A SS +GAGG L  ++KAEQ+QAGMDAETRRSIGEGDKKSKKSMKTVK                             LALAGNL+ITLGKFLAY+HSGSSAMSSEAMHSLVDSANQLLL+VGLRSA+TAPD RHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEEL+NPTVALDKVGMEVWSVLGLSLL+DG+VLVKTFESIW+SKPKN+SLKKHL ++RDPTTLAVLLEDG AC+GVLMA+ GIGLSQYY +PVFDSLAGVSIAGLLG+MGLVLTEVNRRFLIGQSVD+ETTEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKL+LNTRYGQEFRQLLARPPDDK KYKD ETLLSFYTEDVMRAAEREVREAETEIRKKYPEAA+IELEPDSSTH+MFALEQFQTPALRKVEETTLNQM ANLVIAKKAA
Sbjct:    3 AIARAQQMALSSEEGAGG-LGSRSKAEQSQAGMDAETRRSIGEGDKKSKKSMKTVKPLTECCSSDDLSLARRRTCFLGRAWHRLQLALAGNLVITLGKFLAYMHSGSSAMSSEAMHSLVDSANQLLLVVGLRSASTAPDKRHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEELINPTVALDKVGMEVWSVLGLSLLVDGYVLVKTFESIWQSKPKNLSLKKHLTNLRDPTTLAVLLEDGAACVGVLMAMSGIGLSQYYQAPVFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDSETTEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLKLNTRYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANLVIAKKAA 458          
BLAST of mRNA_P-fluviatile_contig18.3147.1 vs. uniprot
Match: A0A6H5J9P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9P9_9PHAE)

HSP 1 Score: 728 bits (1878), Expect = 6.740e-253
Identity = 410/536 (76.49%), Postives = 440/536 (82.09%), Query Frame = 2
Query:  119 MLRQASALRTSSSCSGRAWSRNRGRHAIDLAAV----------HHLPPPNRGLLIWSLCHLHHDALRRREGSDCRTPPIPRAAVLSSGIAGGKGHTLALGRGVWGATARGQRAAFSSADGAGGGLVPKNKAEQAQAGMDAETRRSIGEGDKKSKKSMKTVKLALAGNLIITLGKFLAYLHSGSSAMSSEAMHSLVDSANQLLLLVGLRSAATAPDNRHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEELVNPTVALDKVGMEVWSVLGLSLLIDGFVLVKTFESIWKSKPKNVSLKKHLKDIRDPTTLAVLLEDGGACLGVLMAIGGIGLSQYYHSPVFDSLAGVSIAGLLGIMGLVLTEVNRRFLIGQSVDAETTEGIKAILMSRGSIEQLHQVQ---SQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRYGQEFRQLLARPPDDKTKYKDLETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAFIELEPDSSTHDMFALEQFQTPALRKVEETTLNQMLANLVIAKKAA 1687
            MLR A   RTS+ CS R  SRNR     DLA V          + +PP   GL   S  HLHHDA RRREG D   P +PR      G+AGG G   ALGRG   A AR Q+ A SS +GAGG L  K+KAEQAQAGMDAETRRSIGEGDKKSKKSMKTVKLALAGNL+ITLGKFLAY+HSGSSAMSSEAMHSLVDSANQLLL+VGLRSA+TAPD RHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEEL+NPTVALDKVGMEVWSVLGLSLL+DGFVLVKTFE IW+SKPKN+SLKKHL ++RDPTTLAVLLEDG AC+GVLMA+ GIGLSQYY +PVFDSLAGVSIAGLLG+MGLVLTEVNRRFLIGQSVD+ETTEGIKAILMSRGSIEQLHQ +   S W  T   +         + L +   +   YGQEFRQLLARPPDDK KYKD ETLLSFYTEDVMRAAEREVREAETEIRKKYPEAA+IELEPDSSTH+MFALEQFQTPALRKVEETTLNQM ANLVIAKKAA
Sbjct:    1 MLRHAG--RTSTVCSRRFTSRNRVYD--DLATVGAPWCLKPHRYQIPPSTPGLPFCS--HLHHDARRRREG-DGPIPAVPRPV----GLAGGDGKRSALGRGAMAAIARAQQMALSSDEGAGG-LGSKSKAEQAQAGMDAETRRSIGEGDKKSKKSMKTVKLALAGNLVITLGKFLAYMHSGSSAMSSEAMHSLVDSANQLLLVVGLRSASTAPDKRHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEELINPTVALDKVGMEVWSVLGLSLLVDGFVLVKTFEGIWQSKPKNLSLKKHLTNLRDPTTLAVLLEDGAACVGVLMAMSGIGLSQYYQAPVFDSLAGVSIAGLLGVMGLVLTEVNRRFLIGQSVDSETTEGIKAILMSRGSIEQLHQARCNHSGWGRTLLPSRPRSTSMAPSLLLSSSSIQGTYGQEFRQLLARPPDDKGKYKDHETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAYIELEPDSSTHNMFALEQFQTPALRKVEETTLNQMHANLVIAKKAA 524          
BLAST of mRNA_P-fluviatile_contig18.3147.1 vs. uniprot
Match: W7TG20_9STRA (Zinc transporter 9 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG20_9STRA)

HSP 1 Score: 400 bits (1029), Expect = 6.190e-126
Identity = 211/376 (56.12%), Postives = 273/376 (72.61%), Query Frame = 2
Query:  551 KSMKTVKLALAGNLIITLGKFLAYLHSGSSAMSSEAMHSLVDSANQLLLLVGLRSAATAPDNRHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEELVNPTVALDKVGMEVWSVLGLSLLIDGFVLVKTFESIWKSKPKNVSLKKHLKDIRDPTTLAVLLEDGGACLGVLMAIGGIGLSQYYHSPVFDSLAGVSIAGLLGIMGLVLTEVNRRFLIGQSVDAETTEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRYGQEFRQLLARPPDDKTKYKDLETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAFIELEPDSSTHDMFALEQFQTPALRKVEETTLNQMLANLVIAK 1678
            KS   VKLAL GN++IT+ KFLA+LHSGSSAM SE++HSLVDS NQ LLL+G+R+AATAPD  HQYGYGKS+YFW+LVSALGTFWLGAGVS+R+S ++L++PTV L+++  +VW VLG+S LIDG VL +T + +  SKPK+++L +H++ IRDPTTLAVLLED GACLGV+MAI GIGLS    +PV+DS+ G+ I+ LL  MGL L  +N R+L+GQ+V+ E  + I+ +LM+R  I+ +  VQSQW+G +TFA+KAEVDFDGT+LAAKL    RY  EF              +DL  LL+FY EDV+R  EREV           PEA FIELEP S     FA++  +   LR++E  TLNQ+L  + IAK
Sbjct:  147 KSEHVVKLALGGNVVITIAKFLAWLHSGSSAMLSESIHSLVDSGNQTLLLIGIRAAATAPDRHHQYGYGKSIYFWSLVSALGTFWLGAGVSLRNSFQDLMSPTVQLEEITWDVWGVLGVSFLIDGSVLYQTMQLLRDSKPKHLTLWEHIRRIRDPTTLAVLLEDSGACLGVVMAIVGIGLSHALANPVYDSIGGLCISSLLAAMGLALARLNERYLLGQAVEPEIVDDIRKLLMARPGIDNVQSVQSQWIGPYTFAYKAEVDFDGTYLAAKLM--ARYEDEFL-------GSARLKEDLPVLLAFYAEDVVRTLEREVXXXXXXXXXXXPEAQFIELEPASKDATAFAIDGHREKMLRELEHITLNQLL--IAIAK 511          
BLAST of mRNA_P-fluviatile_contig18.3147.1 vs. uniprot
Match: A0A7S3V4S7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4S7_9STRA)

HSP 1 Score: 396 bits (1018), Expect = 7.710e-123
Identity = 209/370 (56.49%), Postives = 262/370 (70.81%), Query Frame = 2
Query:  557 MKTVKLALAGNLIITLGKFLAYLHSGSSAMSSEAMHSLVDSANQLLLLVGLRSAATAPDNRHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEELVNPTVALDKVGMEVWSVLGLSLLIDGFVLVKTFESIWKSKPKNVSLKKHLKDIRDPTTLAVLLEDGGACLGVLMAIGGIGLSQYYHSPVFDSLAGVSIAGLLGIMGLVLTEVNRRFLIGQSVDAETTEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRYGQEFRQLLARPPDDKTKYKDLETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAFIELEPDSSTHDMFALEQFQTPALRKVEETTLNQMLANL 1666
            +KTV+ AL GN++I + K  A+LHSGSSAM SE +HS+VD  NQ LLLVGLR +    D  H YGYGKS+YFWALVSALGTF+LGAGVSM  SI  L+    +LD +   VW VLG+S  +DG+V  KT   + ++KP+  SL  H++++RDP TLA+LLED GACLGVL+AIGGIG +QYY  PVFD+LAGV I+GLL  MGL+L +VN +FL+GQSVD E  +G++ ILM R SI+ +H VQSQW G  TF+FKAEVDFDGTFLAAKL    RY  EF Q  A      T  +DL  LLS+Y EDVMR  EREVR  E EIR++YP A +IELEP S   D  A++     +L+++E   LN+ L +L
Sbjct:  296 IKTVRRALVGNVVIAVSKMAAFLHSGSSAMLSEFIHSVVDCGNQSLLLVGLRDSGNEADRAHPYGYGKSIYFWALVSALGTFFLGAGVSMTQSIPNLIYGH-SLDDISWHVWGVLGMSFAVDGYVFTKTLMEVRETKPEGTSLLNHVRNLRDPATLAILLEDAGACLGVLIAIGGIGATQYYQMPVFDALAGVGISGLLASMGLILVKVNHKFLLGQSVDKEIRQGVEKILMERRSIDNVHSVQSQWTGPDTFSFKAEVDFDGTFLAAKLM--PRYQLEFAQASA------TLDQDLRVLLSWYAEDVMRTVEREVRNIENEIRREYPGAQYIELEPMSKDADRLAIDDGLEASLKRIEIEALNRYLRSL 656          
BLAST of mRNA_P-fluviatile_contig18.3147.1 vs. uniprot
Match: A0A7S1ZLR1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLR1_9STRA)

HSP 1 Score: 376 bits (966), Expect = 2.860e-116
Identity = 206/364 (56.59%), Postives = 252/364 (69.23%), Query Frame = 2
Query:  575 ALAGNLIITLGKFLAYLHSGSSAMSSEAMHSLVDSANQLLLLVGLRSAATAPDNRHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEELVNPTVALDKVGMEVWSVLGLSLLIDGFVLVKTFESIWKSKPKNVSLKKHLKDIRDPTTLAVLLEDGGACLGVLMAIGGIGLSQYYHSPVFDSLAGVSIAGLLGIMGLVLTEVNRRFLIGQSVDAETTEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRYGQEFRQLLARPPDDKTKYKDLETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAFIELEPDSSTHDMFALEQFQTPALRKVEETTLNQMLANL 1666
            AL GNLII   K  A+L SGSSAM SE +HS VD  NQ LLLVGLR +   PD +H YGYGKSVYFWALVSALGTF+LGAGVSM HSI E++NP+  L +V  E+W+VLG+S  +DG+VL KT + +    P N+ L  H+K IRDP TLAVLLEDG ACLG++MAI GI        PVFD +AG+ I+GLL  MGL+L  VN RFL+GQ VD +   GI+ +L++  SI+ +H VQSQW G  TF+FKAEVDFDGTFLAAKL    RY +EF  L AR   D+    DL  LLS+Y EDVMRA EREV   E EIR++YP A +IELEP     D FA++      LR++E  +LN+ L +L
Sbjct:  171 ALNGNLIICFAKLGAWLSSGSSAMLSEFIHSCVDCGNQGLLLVGLRDSNNEPDRKHPYGYGKSVYFWALVSALGTFFLGAGVSMTHSIGEILNPS--LQEVTWEIWAVLGVSFGVDGYVLYKTIKEVKSEMPSNIKLWDHVKKIRDPATLAVLLEDGAACLGIVMAIAGISAVHATSMPVFDGIAGLGISGLLASMGLILVRVNHRFLLGQGVDQDIVTGIEKMLLTHRSIDHVHSVQSQWTGPETFSFKAEVDFDGTFLAAKLM--PRYQKEF--LEARNTLDQ----DLRVLLSWYAEDVMRAVEREVHHIEAEIRREYPGAEYIELEPMGKDADKFAIDDGMEAELRRIEIESLNRYLKSL 524          
BLAST of mRNA_P-fluviatile_contig18.3147.1 vs. uniprot
Match: A0A7S1FQ98_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQ98_9STRA)

HSP 1 Score: 370 bits (950), Expect = 4.710e-115
Identity = 203/372 (54.57%), Postives = 261/372 (70.16%), Query Frame = 2
Query:  551 KSMKTVKLALAGNLIITLGKFLAYLHSGSSAMSSEAMHSLVDSANQLLLLVGLRSAATAPDNRHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEELVNPTVALDKVGMEVWSVLGLSLLIDGFVLVKTFESIWKSKPKNVSLKKHLKDIRDPTTLAVLLEDGGACLGVLMAIGGIGLSQYYHSPVFDSLAGVSIAGLLGIMGLVLTEVNRRFLIGQSVDAETTEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRYGQEFRQLLARPPDDKTKYKDLETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAFIELEPDSSTHDMFALEQFQTPALRKVEETTLNQMLANL 1666
            KS+ TV+LAL GNL I + K  A+  SGSSAM+SEA+HS VD  NQ LLLVG+R    A D RH YGYGKS+YFWALVSALGTFWLGAGV +  S++EL+NP+     V  EVW+VLG SLL+DG VL K      ++ P ++SL +H++ IRDP TLA+L ED  A  GV++A  GI  +    SPV+D  AGV+I+GLL  +GL L  +N+RFL+GQ+VDA+ TEGI++IL+ R SIE +  VQSQW G + F++KAEVDFDGT+LAA+L   +RY +EFR+       DK    DL  LLS+Y EDVMR  EREVR+ E EIR  YP AA+IELEPDS   D FA++  +  AL+K+E   L +M+ +L
Sbjct:  103 KSLGTVRLALGGNLAIFIAKVWAWQASGSSAMASEAIHSAVDFLNQALLLVGMREGMGAADKRHPYGYGKSIYFWALVSALGTFWLGAGVGLGQSVQELMNPS--FQAVTWEVWAVLGFSLLVDGAVLGKVLLDFRRTAP-DLSLLQHVRRIRDPATLAILYEDAAAVAGVVLASAGIVATYATGSPVYDGTAGVAISGLLAFVGLQLVLLNQRFLLGQAVDADITEGIESILLQRRSIEGVSSVQSQWTGPYAFSYKAEVDFDGTYLAARLM--SRYKKEFRKATEGSSLDK----DLSVLLSWYAEDVMRLVEREVRDIEAEIRSVYPGAAYIELEPDSKYSDQFAIDDVKQEALQKIEMDALEKMMVSL 465          
BLAST of mRNA_P-fluviatile_contig18.3147.1 vs. uniprot
Match: A0A7S2M4U9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M4U9_9STRA)

HSP 1 Score: 371 bits (952), Expect = 2.190e-113
Identity = 202/380 (53.16%), Postives = 261/380 (68.68%), Query Frame = 2
Query:  566 VKLALAGNLIITLGKFLAYLHSGSSAMSSEAMHSLVDSANQLLLLVGLRSAATAPDNRHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEELVNPTVALDKVGMEVWSVLGLSLLIDGFVLVKTFESIWKSK-------PKNVSLKKHLKD-IRDPTTLAVLLEDGGACLGVLMAIGGIGLSQYYHSPVFDSLAGVSIAGLLGIMGLVLTEVNRRFLIGQSVDAETTEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRYGQEFRQLLARPPDDKTKYKDLETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAFIELEPDSSTHDMFALEQFQTPALRKVEETTLNQMLANLVIAKK 1681
            V+ ALAGN +I + K  A + SGSSAM SE +HS+VD  NQ LLLVGL S+  APD  H YGYGK++YFWALVSALGTF+LGAGVSM H++ EL+NP V + +V  EVW VLG+S ++DG+V  KT + +  S         KN+S   +    +RDP TLAVLLEDG ACLG+++AIGGIG++QY   P+FD +AG+SI+ LLG+MG+ L  VN R+LIG  VD  T E I+ I++ R SI+ +H +Q+QW G  TF++KAE+DFDGTFLAAKL    RY QEF    A+   D+    DL  LL++Y EDVMRA ERE+R  E EIRKKYP A +IELEP S   D +A++      LR+VE   LN+ L +L   K+
Sbjct:  282 VQRALAGNFVIAVAKLAAAISSGSSAMLSEFVHSVVDCGNQALLLVGLNSSQHAPDRSHPYGYGKAIYFWALVSALGTFFLGAGVSMTHAVGELMNPRV-MTEVPWEVWGVLGMSFVVDGYVFSKTVQGVRASMRIDGGQDTKNMSFWTYATTKVRDPATLAVLLEDGAACLGIVLAIGGIGMTQYTGLPIFDGMAGISISALLGVMGIALVSVNHRYLIGHGVDRATREDIEQIILGRRSIDNVHAIQTQWTGPDTFSYKAEIDFDGTFLAAKLM--PRYQQEFFD--AKESLDR----DLRVLLAWYAEDVMRAVEREIRHIEEEIRKKYPAAQYIELEPMSKDADRYAIDDGMKAQLRRVEIEVLNRYLKSLYKIKE 652          
BLAST of mRNA_P-fluviatile_contig18.3147.1 vs. uniprot
Match: A0A7S2UA45_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA45_9STRA)

HSP 1 Score: 363 bits (932), Expect = 2.810e-113
Identity = 200/384 (52.08%), Postives = 254/384 (66.15%), Query Frame = 2
Query:  551 KSMKTVKLALAGNLIITLGKFLAYLHSGSSAMSSEAMHSLVDSANQLLLLVGLRSAATAPDNRHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEELVNPTVALDKVGMEVWSVLGLSLLIDGFVLVKTFESIWKSKPKNVSLKKHLKDIRDPTTLAVLLEDGGACLGVLMAIGGIGLSQYYHSPVFDSLAGVSIAGLLGIMGLVLTEVNRRFLIGQSVDAETTEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRYGQEFRQL------------LARPPDDKTKYKDLETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAFIELEPDSSTHDMFALEQFQTPALRKVEETTLNQMLANL 1666
            K++K V+ ALAGN++I   K  A+L SGS +M SE +HS VD  NQ LLLVGLR +    D  H YGYGK+VYFWALVSALGTF+LGAGVSM HS+ EL++P+  + + G EV +VL  SLL+DG+VL +T   +  + P+ +S  KH+  +RDP TLA+LLEDG ACLG++MA  GI  +      VFD LAGVSI+ LL  MG++L  VN RFL+GQ+VD E T GI+ IL++R SI+ +H VQSQW G  TF++KAEVDFDGTFLAAKL    RY  EF Q+                        DL  LLS+Y EDVMR  EREVR  E+EIRK+YP A +IELEP S   D FA++      LR++E   LN+ L +L
Sbjct:   22 KTVKNVQRALAGNVVICGAKLGAWLSSGSPSMLSEFVHSCVDCGNQSLLLVGLRDSRNLADRAHPYGYGKAVYFWALVSALGTFFLGAGVSMTHSVGELMHPSSLIAEYGPEVGAVLAFSLLVDGYVLSRTLYEVRSTVPEGMSFWKHVSQLRDPATLAILLEDGAACLGIVMACTGIAATHASGLVVFDGLAGVSISALLATMGIILVRVNHRFLLGQAVDREITGGIERILLARRSIDHVHSVQSQWTGPDTFSYKAEVDFDGTFLAAKLM--PRYQSEFLQVNNSXXXXXXXXXXXXXXXXXXXXSDLRVLLSWYAEDVMRTVEREVRHIESEIRKEYPGAEYIELEPMSKDADRFAIDDGMEAQLRRIEIEALNRYLKSL 403          
BLAST of mRNA_P-fluviatile_contig18.3147.1 vs. uniprot
Match: B8C824_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C824_THAPS)

HSP 1 Score: 368 bits (945), Expect = 6.930e-113
Identity = 206/376 (54.79%), Postives = 255/376 (67.82%), Query Frame = 2
Query:  566 VKLALAGNLIITLGKFLAYLHSGSSAMSSEAMHSLVDSANQLLLLVGLRSAATAPDNRHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEELVNPTVALDKVGMEVWSVLGLSLLIDGFVLVKTFESIWKSKPKNVS----LKKHLKDIRDPTTLAVLLEDGGACLGVLMAIGGIGLSQYYHSPVFDSLAGVSIAGLLGIMGLVLTEVNRRFLIGQSVDAETTEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRYGQEFRQLLARPPDDKTKYKDLETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAFIELEPDSSTHDMFALEQFQTPALRKVEETTLNQMLANLVIAKK 1681
            V+ ALAGN II   K  A + SGSSAM SE +HS+VD  NQ LLLVGL ++  A D  H YGYGK++YFWALVSALGTF+LGAGVSM H++ EL+NP++  + V MEVW VLG+S  +DG+V  KT + +  S   +       K     +RDP TLAVLLEDG ACLGV++AIGGIG++QY   PVFD LAG+ I+ LLG+MG+ L  VN RFLIGQ +D  T E I+ I++SR SI+ ++ VQSQW G  TF++KAEVDFDGTFLAAKL    RY QEF           T  +DL  LLS+Y EDVMRAAEREVR  E EIR KYP A +IELEP S   D +A++      LR+VE   LN+ L +L   K+
Sbjct:  249 VQRALAGNFIIAAAKLAAAMSSGSSAMLSEFVHSVVDCGNQALLLVGLSTSHQAADRSHPYGYGKAIYFWALVSALGTFFLGAGVSMTHAVGELMNPSMTTE-VPMEVWGVLGMSFAVDGYVFGKTVQGVKASMRIDGDGGSFWKYATTKVRDPATLAVLLEDGAACLGVVLAIGGIGMTQYTGMPVFDGLAGMGISALLGVMGMALVSVNHRFLIGQGLDKATREDIEKIILSRRSIDNVYSVQSQWTGPDTFSYKAEVDFDGTFLAAKLM--PRYQQEFFDA------KHTLDRDLRVLLSWYAEDVMRAAEREVRHIEEEIRLKYPSAQYIELEPMSKDADRYAIDDGMEAQLRRVEIEVLNRYLKSLYKIKE 615          
BLAST of mRNA_P-fluviatile_contig18.3147.1 vs. uniprot
Match: A0A7S4JAV4_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAV4_9STRA)

HSP 1 Score: 368 bits (944), Expect = 3.260e-111
Identity = 204/371 (54.99%), Postives = 253/371 (68.19%), Query Frame = 2
Query:  566 VKLALAGNLIITLGKFLAYLHSGSSAMSSEAMHSLVDSANQLLLLVGLRSAATAPDNRHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEELVNPTVALDKVGMEVWSVLGLSLLIDGFVLVKTFESIWKSKPKNVSLKKHLKDIRDPTTLAVLLEDGGACLGVLMAIGGIGLSQYYHSPVFDSLAGVSIAGLLGIMGLVLTEVNRRFLIGQSVDAETTEGIKAILMSRGSIEQLHQVQSQWVGTHTFAFKAEVDFDGTFLAAKLQLNTRYGQEFRQLLARPPDDKTKYKDLETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAFIELEPDSSTHDMFALEQFQTPALRKVEETTLNQMLANLVIAK 1678
            V+ AL GNL+I + KF A+L SGSSAM SE +HS+VD  NQ LLLVGLR +    D +H YGYGKSVYFWALVSALGTF+LGAGVSM H++ EL+    +L +V   VWSVLGLS  +DG+VL KT   +    P       +++++RDP TLA+LLEDG ACLGV++AI GIG + Y   PVFD LAGV+I+GLL  MGL L  VN RFL+GQ+VD   T GI+ IL  R SIE ++ VQSQW G  TF++KAEVDFDGTFLAAK+    RY +EF  L AR   D     DL  LLS+Y EDVMR  EREVR+ E +IR+ YP A FIELEP S   + FA++      L+++E   LN  L+ L  +K
Sbjct:  365 VRRALYGNLVICVAKFGAWLSSGSSAMLSEFIHSVVDCGNQSLLLVGLRDSGMEADRKHPYGYGKSVYFWALVSALGTFFLGAGVSMTHAVGELMGGP-SLQEVTWHVWSVLGLSFAVDGYVLWKTVAGLRVDAPDGTPFWTYVRNMRDPATLAILLEDGAACLGVVIAIAGIGATSYSGMPVFDGLAGVTISGLLAAMGLALVRVNHRFLLGQAVDPVITRGIEDILTGRSSIENVYSVQSQWTGPDTFSYKAEVDFDGTFLAAKIM--PRYQREF--LEARDTLDS----DLRVLLSWYAEDVMRTVEREVRDIEADIREAYPGAEFIELEPMSKDSNRFAIDDGMEAQLKRIETDALNHFLSRLYKSK 726          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7R8_ECTSI3.790e-25584.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9P9_9PHAE6.740e-25376.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TG20_9STRA6.190e-12656.12Zinc transporter 9 n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A7S3V4S7_9STRA7.710e-12356.49Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1ZLR1_9STRA2.860e-11656.59Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1FQ98_9STRA4.710e-11554.57Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2M4U9_9STRA2.190e-11353.16Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2UA45_9STRA2.810e-11352.08Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8C824_THAPS6.930e-11354.79Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S4JAV4_9STRA3.260e-11154.99Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig18contigP-fluviatile_contig18:421431..429849 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score736.9
Seed ortholog evalue7.7e-210
Seed eggNOG ortholog2880.D7G7R8
KEGG koko:K14696
KEGG TC2.A.4.6
EggNOG free text desc.cation transmembrane transporter activity
EggNOG OGsCOG0053@1,KOG2802@2759
Ec32 ortholog descriptionCation efflux protein
Ec32 orthologEc-06_000610.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categorymitochondrion
Exons11
Model size2700
Cds size1815
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815753.6515274-UTR-P-fluviatile_contig18:421430..4222211622815753.6515274-UTR-P-fluviatile_contig18:421430..422221Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 421431..422221 -
1693563189.8562078-UTR-P-fluviatile_contig18:421430..4222211693563189.8562078-UTR-P-fluviatile_contig18:421430..422221Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 421431..422221 -
1622815753.7942982-UTR-P-fluviatile_contig18:429755..4298491622815753.7942982-UTR-P-fluviatile_contig18:429755..429849Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 429756..429849 -
1693563189.972397-UTR-P-fluviatile_contig18:429755..4298491693563189.972397-UTR-P-fluviatile_contig18:429755..429849Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 429756..429849 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815753.6721408-CDS-P-fluviatile_contig18:422221..4225031622815753.6721408-CDS-P-fluviatile_contig18:422221..422503Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 422222..422503 -
1693563189.8701806-CDS-P-fluviatile_contig18:422221..4225031693563189.8701806-CDS-P-fluviatile_contig18:422221..422503Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 422222..422503 -
1622815753.6866302-CDS-P-fluviatile_contig18:422707..4228331622815753.6866302-CDS-P-fluviatile_contig18:422707..422833Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 422708..422833 -
1693563189.877975-CDS-P-fluviatile_contig18:422707..4228331693563189.877975-CDS-P-fluviatile_contig18:422707..422833Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 422708..422833 -
1622815753.698025-CDS-P-fluviatile_contig18:423718..4238391622815753.698025-CDS-P-fluviatile_contig18:423718..423839Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 423719..423839 -
1693563189.88575-CDS-P-fluviatile_contig18:423718..4238391693563189.88575-CDS-P-fluviatile_contig18:423718..423839Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 423719..423839 -
1622815753.709914-CDS-P-fluviatile_contig18:424377..4244751622815753.709914-CDS-P-fluviatile_contig18:424377..424475Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 424378..424475 -
1693563189.8933818-CDS-P-fluviatile_contig18:424377..4244751693563189.8933818-CDS-P-fluviatile_contig18:424377..424475Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 424378..424475 -
1622815753.7209725-CDS-P-fluviatile_contig18:424933..4250351622815753.7209725-CDS-P-fluviatile_contig18:424933..425035Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 424934..425035 -
1693563189.9009688-CDS-P-fluviatile_contig18:424933..4250351693563189.9009688-CDS-P-fluviatile_contig18:424933..425035Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 424934..425035 -
1622815753.731327-CDS-P-fluviatile_contig18:425345..4254391622815753.731327-CDS-P-fluviatile_contig18:425345..425439Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 425346..425439 -
1693563189.91-CDS-P-fluviatile_contig18:425345..4254391693563189.91-CDS-P-fluviatile_contig18:425345..425439Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 425346..425439 -
1622815753.740587-CDS-P-fluviatile_contig18:426522..4266051622815753.740587-CDS-P-fluviatile_contig18:426522..426605Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 426523..426605 -
1693563189.9220984-CDS-P-fluviatile_contig18:426522..4266051693563189.9220984-CDS-P-fluviatile_contig18:426522..426605Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 426523..426605 -
1622815753.749953-CDS-P-fluviatile_contig18:427191..4273201622815753.749953-CDS-P-fluviatile_contig18:427191..427320Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 427192..427320 -
1693563189.9324744-CDS-P-fluviatile_contig18:427191..4273201693563189.9324744-CDS-P-fluviatile_contig18:427191..427320Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 427192..427320 -
1622815753.7602875-CDS-P-fluviatile_contig18:427935..4280541622815753.7602875-CDS-P-fluviatile_contig18:427935..428054Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 427936..428054 -
1693563189.942748-CDS-P-fluviatile_contig18:427935..4280541693563189.942748-CDS-P-fluviatile_contig18:427935..428054Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 427936..428054 -
1622815753.7721906-CDS-P-fluviatile_contig18:428455..4286391622815753.7721906-CDS-P-fluviatile_contig18:428455..428639Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 428456..428639 -
1693563189.953774-CDS-P-fluviatile_contig18:428455..4286391693563189.953774-CDS-P-fluviatile_contig18:428455..428639Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 428456..428639 -
1622815753.7823393-CDS-P-fluviatile_contig18:429278..4297551622815753.7823393-CDS-P-fluviatile_contig18:429278..429755Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 429279..429755 -
1693563189.9643745-CDS-P-fluviatile_contig18:429278..4297551693563189.9643745-CDS-P-fluviatile_contig18:429278..429755Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 429279..429755 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig18.3147.1prot_P-fluviatile_contig18.3147.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig18 422222..429755 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig18.3147.1

>prot_P-fluviatile_contig18.3147.1 ID=prot_P-fluviatile_contig18.3147.1|Name=mRNA_P-fluviatile_contig18.3147.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=605bp
MLHARQCHMLRQASALRTSSSCSGRAWSRNRGRHAIDLAAVHHLPPPNRG
LLIWSLCHLHHDALRRREGSDCRTPPIPRAAVLSSGIAGGKGHTLALGRG
VWGATARGQRAAFSSADGAGGGLVPKNKAEQAQAGMDAETRRSIGEGDKK
SKKSMKTVKLALAGNLIITLGKFLAYLHSGSSAMSSEAMHSLVDSANQLL
LLVGLRSAATAPDNRHQYGYGKSVYFWALVSALGTFWLGAGVSMRHSIEE
LVNPTVALDKVGMEVWSVLGLSLLIDGFVLVKTFESIWKSKPKNVSLKKH
LKDIRDPTTLAVLLEDGGACLGVLMAIGGIGLSQYYHSPVFDSLAGVSIA
GLLGIMGLVLTEVNRRFLIGQSVDAETTEGIKAILMSRGSIEQLHQVQSQ
WVGTHTFAFKAEVDFDGTFLAAKLQLNTRYGQEFRQLLARPPDDKTKYKD
LETLLSFYTEDVMRAAEREVREAETEIRKKYPEAAFIELEPDSSTHDMFA
LEQFQTPALRKVEETTLNQMLANLVIAKKAAAAAAAAEAKARKEKDRTKN
TSRTKNDDDEAGRREAERIDAAIAADDLRRKQGGEGEDTANGGPGVQGGL
GSRR*
back to top

mRNA from alignment at P-fluviatile_contig18:421431..429849-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig18.3147.1 ID=mRNA_P-fluviatile_contig18.3147.1|Name=mRNA_P-fluviatile_contig18.3147.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8419bp|location=Sequence derived from alignment at P-fluviatile_contig18:421431..429849- (Porterinema fluviatile SAG_2381)
GTGGAAGGCCCAATTCTAGGAATAGAAAAACCAGCTGTCCATCCCCATCG TTATCCCTCCGCATTCCGAATCTGCTGATGCTTAAACGCTTCACATGCTT CACGCTCGCCAGTGCCACATGCTCCGCCAAGCGAGCGCCCTTCGTACCTC TAGTTCTTGCTCAGGGCGAGCCTGGTCTCGGAATCGTGGGCGGCATGCCA TCGACCTTGCTGCAGTACACCACCTCCCACCTCCTAACCGAGGCCTGCTA ATCTGGTCATTATGCCATCTCCATCATGATGCCTTGCGAAGGAGAGAGGG CAGCGACTGCCGTACGCCGCCCATACCCCGTGCAGCAGTGTTGTCATCGG GTATTGCCGGGGGCAAAGGTCACACGTTAGCATTAGGTCGGGGCGTCTGG GGCGCAACAGCACGTGGTCAGAGAGCTGCATTCAGCAGCGCGGACGGGGC GGGAGGCGGACTGGTGCCCAAGAACAAGGCGGAGCAGGCGCAGGCCGGCA TGGACGCCGAGACCCGCAGGTCCATCGGGGAGGGGGACAAGAAGTCCAAG AAGAGCATGAAGACAGTGAAGGTCAGCATAACATGTTGTACTCGCAGACA ATTTGGACACGGGATGCGTGCTGGACCTCCCGACGTCGAGACGTCGACAC ACAGTCTTTTCCTGGAAGCCCGCGGTTGCAGTTGGTGTGCCTTCTCCGAG AGAACCGTCCTCGTTTTGGCATGGTGAATGTTTTAACTAAGTTCGCCGCG ATGATAGTTTTTGAACACCGGGTAAAAAGGGAGATTTGCGAGAGACTTGG TGTGCGCTCAGACAGGAGATACTGATGCTGGTGTTGCAAGTGGCCACATC GTACCAGTAAATCGTGAGCGTTCTGATAGCTTTTCATTTGGAATCCATTC GCTCTGTGGGTCACTGCATCAGCAGGAGCATGTCGTCTGCATCCTTCAAG CGCCGCACGCTGCGCTGTGCTGGGTGCGCGCTCTCACTCGGTTGTCCACC TGTCGCGGTCTATCGGCGTTCCTTCGGTAGACTCCATCTCCACCGCATCC GCCGTCGCCCCCCATCCTTTGTCCGTGTACATTTACCCGTACACGTAGCA CCCTGATCTGACCCAAGGTGTAATTCTGTGAACAATCGCAACTCGCCTCT CTGCGTTTTCCCCCGATCTCAAATTCCTGCACCACGCTGCAACGCGATGT CTGCGTCCAGCTTGCGTTGGCCGGCAACCTGATCATCACTTTGGGCAAGT TCCTGGCGTACCTGCACAGCGGCTCTAGCGCCATGAGCTCAGAAGCTATG CACTCCCTCGTCGACTCGGCGAACCAACTTCTGCTCTTGGTGGGGCTCAG GAGTGCCGCCACGGCTCCCGACAATCGGCATCAGTACGGATACGGTGGGG AATGCGACGTGTACTAGAAGGAGGACACGCGACGGGGATTCAAATGCTGT GCCTCGCACGTCGTGACCGACATTATCAGTCACACCAACACTAATAAGTG GAATCAACACCCGTTACTAGCACCAAGATCCGCCATTCGCGCCGACACGC GCCAGCAGTGTTGGTAGCACCGACAGTAGCTCCCGCCTTTCCAGGGTCTC TAAGGAGTCGACGGATGGTGGGATACTGTAGGAAAACGTGGATGCCTTCG AGGACGGGGAAACGGAAGGACGGGAGGGTGCCGATACAACATTGGCGCGC AGGCGCGCAGTATGCACACCGCCACCGCGGTATCCTGCGTAGCGATCGAT TTTACCCGCCGCTCGCATCCTCCGGTTGTCGTCCCCTCGCTTCAGGGAAG TCGGTGTACTTTTGGGCTCTTGTGTCCGCGCTGGGGACGTTCTGGCTGGG CGCGGGGGTGTCCATGCGACATAGCATAGAGGAGCTCGTCAACCCGACGG TGGCTTTGGACAAGGTGGGAGGTGTGAGGAGAACGCCGTGCATAGGACTA TTTCAGCAAGTGTCGTGGGGCACGGCATGATGGGGGAGGGCGTAGCCGGA TGGAGAGGTCGAGGTGGCCACGGTGGCGGGGGAACGTCGTGATCCTCCTC GCGTTGGTCGCGTAATCTAGGCAACGGGGTCGACGGGAAGCTCATATTTT CCCCGAGGTAAATGTTGCTTCGACGCTTTTGGTGTTCCCGGCCGGTGTTC GGCTCTTGTACAGCACAGAAAAGGCTCCCACGTGAGGCGGTGGTGAGGCA GCCGAAAACGACCGTCTTCTATGAGGCAGTCCCCGTACTTAGGCCTGCCG AATATCGGTCCCCATGCTATATTGGCATGTGTGTTTGTTTCTCGGCCAGC ACTGCCCGCCCTTACCGCGATTCTTTACGTTCGGGCGGGGTCTTGAGCGT ACCGATTACTTGCGAGCCCCCGTCTTGAAGGAGGCACACAACATTCCAAC CAACTCCACCGCAACATGAGCGCCAGCGCCGGGGTCCGCACCCGACGCCT TTGTCTTCCTTTCACCGGATGCTGTCGTACTGCGTGTTTTATTGTTCGCC TCCTTGTGATGCTTTCCGCATTTTGTGAGGTGGGAATGGAGGTGTGGTCT GTTCTAGGACTCAGTCTGCTCATCGACGGCTTCGTCCTGGTGAAGACGTT CGAGAGCATCTGGAAGTCCAAGCCCAAGAACGTCAGCTTGAAGAAGCATC TCAAGGACGTGAGCGGGGGAGGCTCCTCTTGCAGCCTCCGCGAAAGTGTG ACGTTGTTTCTTGTCGTGTTGACCGAGCAAACAAACGCTCTCGAGCACTC TCAAGGAAGAACTCTTGCGACCGCTGCCGATATGACGTCATGTTGAGCGG AGTAAGCGACACCCTCCATACTTTCTGTTTTATCCAACGTTGCTCTGCAT GGCCACCGCTGGAGGGCCGGATGAGGGTCACAGTCACGGAATGCACAGCC CGTCTTACTGCCTACTATCCCCGGAGAGTCAAGCTCCCCTTTTGCGAGGT CCCGTTTTCGTTCTGCAAGTGTTGTCGAGTTGAGTCGGGCGTGAAAATTC TCCAGCGCACATTGCATGGGTTCGTCCTTCGCTTCGGCCTTCTTAGGTTG CACATCTCGAGCGATCATACGCTGGAAGAAGTCGATCACATTCTCAGTCA CTCACCCGCTTGCCCCCTCCTCTCAGCCAGTCGGTCCATGTCTGCTGAAC GGTCGAACTGAATCGATGCCCCCCTCGATTCTTCGGTCGAAACGATGCTG ATGGTGCTTTATGCTGTTGCTTCTGCTGTTGATGTTGGGGGCAGATCCGA GACCCTACCACGCTGGCTGTCCTACTCGAGGATGGCGGGGCGTGCCTGGG CGTGCTCATGGCCATCGGTGGCATCGGGTGAGAGATATGCAGAGGGGATG AAGTACAATGGGCCCCCCTCAGTAGCGCCGATTGAAAAGTGCCGCTGCCC GATACAGTGCCGGTCGAATCTCTGAGCAGATAATGGCACCATTTATTGAG GTCCCCCCACGGAAGTCTGTCGCTGCACTGGTCCTGTCCACCTCGTCCTG CCGACTCGCTCCGCGTGCTCTTTTAATCTGCCGGTCGAGCAACGGCTCTA GGACCACCACCCTCGTGTGATCGATCGATTGCGGTGTCGCTGTGAATGCA ATCCATCGATCGATTGCGGTTTAGTTTAGGCAGCGTTTTCTCGTCCCCAA AGTGTGCACGCTTTGTAGCCCTGCGGCTACACTTATGCTCGTCGTCGCTG CTGCGGCTGACATTTGCGGTAAACAGCTGATATTCCATGTCATTTGCGCT GGTGTCCGCACCAAGGGCATCAAATTACCGTATTTCATGGGGTACAATAG ACGGCCTGGGCCGATCCTCAGAGCTCGATTGCTGCACGATCAAGCGGTTA CTGATGCTTGGCGATACGCTTTCTTAGCTCTCGACGAGGTATTCCCAACG CCGGGCTTTTCGGCGTCGGCGCTCATCGGACTGCGGAGCTCCGTGGTTTG AAAATCGGCCCACGGTGTCTGTCGTACTTCGTGGAACACGGAATATCACT CTTGCGTGCGTGCACTTCCAAGGTGTCGTTCGCCAGTAGACCTGGCAAGT TCGGACAAGGCCAGGGGAGGAAGGACCCCCTGTTTCTGTCCGTTGTTGCT ATTTCCTTCTGCACGTCCCGCGAGCTGCTTGTATACCATTTTCTCGATCG CGCACCGCGTGACAAGATGGCACGGAAGATCTCCCTTCCATGCGCGTGTC CACTATTGATTCAGCGAGAGCAGCGGAGTGCTGTTCCACTCTTGCTACTT TCAGTCGAGGCGATTTCCGGAACGTCCTCACTCTCGGACCGTGCACGCCC CGATGCCCCCCTGATTTATCGCGCGCTTCTCGTCGTGGTCCGTCTTGCGT ACTACCCCTTTTATCTTGCTTGCTTCTTTCGCCGCCCCGTCCTGCCCGGT TGGTGTGCAGGCTGAGCCAGTACTACCATAGCCCGGTGTTCGACAGTCTG GCTGGCGTGAGCATCGCGGGGCTGCTAGGGATCATGGGGCTGGTGCTGAC TGAGGTGCATGTCCAAATGTAGCAAAGTATAGTAACGTCGTGGCTCCAAG GCTTTGCTTGCGTTTTCTGGTCATGGGATGTTGCAGGCGGGTAGCAGCAG GGACGACTCCGTAGGTTTGTCGAACCGCCCGTGCAGTTGCGGACGAAGCA TTGCCGGAGTACGCGGCCCGAGCTATTGTTGAAGGTGTGCTCCAGCGGGG GACTTTGATTCAACTGTCGTGGGCAGTAATTTTTGCGCTGCACGAACCCC CGTGAGCTTGTTCGTCATGTTCGTCGTGTTGCCTTTCTGGTGGGTCCGAT ACTGATCGCCTCAGGTGAATCGCCGCTTTTTGATCGGGCAGTCCGTCGAC GCGGAGACCACGGAGGGCATCAAGGCGATCCTCATGAGCAGGGGGTCCAT CGAACAGCTGCACCAGGTGGGACTGGCAGGCGTGCACGCCTGGTCAGAAC GATTCATGAAAAGAAGCAGAGGGCGGGGGGGCGACTATTTACAGAATGGC GAAGCAGAAATGAAGAAGCAGCGCTGCCAGCCATCGGCAGCCCAGAATGC ACAAGCTGTTTGCTGCGCGATGCGCGGAATAAGCCGAGACCCAAAAGTTG TCTGTGGGAAGCGTGAGTCTGCACACATACTTCACCAGACCCTGGCGTAT GGCATTGGCTCCACTCCCTGTGGGCATCGCCGTTTCCGTGTCGCCGCATA CCCGGACGTCTCAGACTGCTTTGTACTGTGTTACGTCTAGGGCGGGTCGA TTGTTGGCCATAATCTAAGCCTATGCCCGATCGCACTTCCTACACGCATG CACAGCTTCGTTTCCGCTCCCAACCGAATTCGTTTCTGTTGCGCATCTGA CTCATTCGTTCGCCCTACCCGAAGGTACAATCGCAGTGGGTGGGGACGCA CACCTTCGCCTTCAAGGCGGAGGTCGACTTCGATGGCACCTTCCTCGCCG CGAAGCTCCAGCTTAACACCAGGCAAGCGTCATTCGGAGTGTATTGCTAT TGCTTGTTACTTTGCCGAGCCGTAGCTTGTCGCCGGTCGCTGCCTGTAAT TGTGAAGAACACGAACGATACGGCTTGGTGCTGGTATTGAAGAACTTATA CCTGGGAGTACTTTCTGAACTATTGAGGCATTCCCCCCGGACCCGGTGGC CCCGCACCCTGTCGCAGACAAATACCATTTAGGTGTCTCTGCTTTCCTTG CCGTCCGAATAGCGTATCCAATCGAAATGTCCCGGTACAGGTGTCTCGCG TCGGCGAATTAGCGGGACACTGTGTGACTGCCTTCGACTTTACGCACCGC AGGCATCGAAGCCCTCACCTGCCAATTTTAAAGCGAAAGTGTGGGACTAA GCAAGAACTCCACGTCCCACGCAACCTCCCTCACCCAGTCTCCTGTCCTC GCGTTGAGCTTTTTTTCACTGACTGTTCCCTACCAGCGGTCTTCGGTGTC AGGTTTCCGTCAGAACCACATTGTGCTCAATTCCTTCCGATCATGAAACC GATACTTCAGGTACGGTCAGGAGTTCAGGCAGCTGCTAGCTCGACCTCCG GACGACAAAACGAAGTACAAGGACCTCGAGACGCTGTTGTCCTTCTACAC CGAGGATGTCATGCGGGCGGCAGAACGAGAGGTGTGAAGAGGGAACCTTG TGCGTTTTTGCTCGGTAGGCGATTGGCTGATTTTGGATAGAGGGGGTGGT TTGTAAACTGAGGTTAGTAAAGTTAGTGTTGCTAAATCGGGGGGAAAATC GCCTACTGATAAAGCCTAGAACCTCTACTTTTCTTTTTATGAACGAGGTT TGAGGGATGGGGGGGGGGGTCGAGAACCTGCGGTGGGGCCACTGGCCGAG CAGTGCGCATCCAACGATCTACAGCAAGCGCGCGTCGCTAAATATCGTTT CCGCTCGGACTTTCACAAAAGCCTTCGGTGGACTTTGTTCCAGCTCGAGC TCTCGCCGTGCCGATGGCTGGGTGCGATTTGATTTGGTGGGAAAGGCAAG CCCCATCTCGTGATCGTCTCAGGCAAGTGTCTCAACGAAACGCTTCCGAA GCCGGCCGTCTTGTTCGCCCTTGGGGGGACGGGAATGTATCCCGCTTTTG CTTGCAAACTTGCAGAATTTCCGCCGACTCCATGCGCTGGTCTCCTTGCG GAAACTCGCAGCTCGTGCCGTTGTCCCCGAAACGAGTATTCCTGGTCTCC TCGAGGAAACGTGTTGCTCGAGTCGTTGTCCCCGAAAACGAGTTTTGCCG GCTTCCTCAAGCGGAACCATTTCACTGGTGGCGCGTCACGCCTCTCGTCG ATTTTGCCGTCATCCGCCACCCTTTGGAATCAATGAGTTTTTGTTGTTGA TGTTGTTGTGGTGGTGTAGTGGTGGTGGTGCTTCTTGAGTTTGACCGTGA GGCGATGTTTGTTGAGTTTGACCGTGAGGCGATCTTGTTCTCTTTCCGCA CGCTTACAAACTTGTCTAGAGCGACGTTGATCGACTGCTGTTTGAAACAA TTTTGGCCGGAACAAGGTGCGCGAGGCGGAGACCGAGATCCGCAAAAAGT ACCCGGAGGCGGCGTTCATCGAGCTGGAGCCGGATAGCAGCACCCACGAC ATGTTCGCTCTCGAGCAGTTCCAGACCCCCGCCCTGCGAAAGGTGAGAAC CGGGAGTTGATTGAATCGTGATCAGTGGTTGACGGTGACAATTTTGATGA AGGACAAGTGTCCTTTAGTTTCTTCATGCAGGAAGCCGTTTGCGTTGAAC ACCAGCAAGACCAGCATGACGACTGCACTAGAGGTACTCGAAGAAAAAAC ATTTGCTGAGTTGAAGTTTGGCTGTCCACTTGCGTGCTTCGTGCAGGTGG AAGAAACGACGCTTAACCAAATGCTGGCGAACCTAGTGATCGCGAAGAAG GCTGCCGCAGCTGCCGCCGCTGCTGAGGCGAAGGCGCGCAAAGAGAAAGA TAGGACAAAAAACACCAGCAGGACCAAGAACGATGACGACGAAGCTGGGA GGCGGGAAGCCGAGCGCATAGACGCGGCCATTGCCGCCGATGATCTGCGG AGAAAGCAGGGCGGGGAAGGCGAGGATACAGCGAATGGAGGGCCAGGGGT GCAGGGCGGGCTGGGAAGCCGCCGATAGAATATCGCACAGCACAGGGCAA AGACAACTAGATGATATTCGGAGTGGGCAAGTGTGTCGCATGCGGCGAGT GTCGTAGAGTTGCATCGACGTTCGTGTTGGATCACTGCTTTTGCGCATGA TAAGCTAGTTCTCGTCCGTGCACAGCGATAAACACTATGCTTTTTTATTG GTCGTTTTTGAGGGGGGCGCTGTGCTGCTGCTGCATGTTGGGTGAGGATG GGATTGGACGAAGAAGAACAAGAGCATGGAGTTCTGAGGCGTCATTCGAT GCTGCTGCTTTCATGTTGGGGTGTCGAGTGGGGCGGCATGTTGGGCCAGG CAATTTTGCCGGTGTAGGCGTGGTCGAGCGTTGTTGAACTCTGGTTGTGT CACAAGGGGGATATTTAGGATACGTAGGCACATCTGTTGGATAGGCACAT CTTTCGGCACTGAGATTCGTTTCAGGCGTGTGTAACTTGATGCAGTCTAA AGCGAAAACGGGAACGACTCGTCCGATGCAGTCGATTGAGTTGTTAACAA CTCTCAGGCGACTGCATTTGATTAGTCCAACTTGAGCGGAATGAAGTTAG ACGAGGAGGGGCGTGTCTTCGATCCGCGCACTGGTAGGCACACATGGCAT TACGTAAGTGAGTGGTATTGGGCCGCAGACACAACTCGAGGCGCCCATCA TACTTTTATTTTCATGATCAATATGCTCCTGGTTGAGTTTCCGCAGGCTG GTCCGCTACAACACATCTAGCAAGCTAGAGAATATTTCGCCCTCCATTTG CCTCCACAGCAAGTTGTCC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig18:421431..429849-

>mRNA_P-fluviatile_contig18.3147.1 ID=mRNA_P-fluviatile_contig18.3147.1|Name=mRNA_P-fluviatile_contig18.3147.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3630bp|location=Sequence derived from alignment at P-fluviatile_contig18:421431..429849- (Porterinema fluviatile SAG_2381)
ATGCTTCACGCTCGCCAGTGCCACATGCTCCGCCAAGCGAGCGCCCTTCG
TACCTCTAGTTCTTGCTCAGGGCGAGCCTGGTCTCGGAATCGTGGGCGGC
ATGCCATCGACCTTGCTGCAGTACACCACCTCCCACCTCCTAACCGAGGC
CTGCTAATCTGGTCATTATGCCATCTCCATCATGATGCCTTGCGAAGGAG
AGAGGGCAGCGACTGCCGTACGCCGCCCATACCCCGTGCAGCAGTGTTGT
CATCGGGTATTGCCGGGGGCAAAGGTCACACGTTAGCATTAGGTCGGGGC
GTCTGGGGCGCAACAGCACGTGGTCAGAGAGCTGCATTCAGCAGCGCGGA
CGGGGCGGGAGGCGGACTGGTGCCCAAGAACAAGGCGGAGCAGGCGCAGG
CCGGCATGGACGCCGAGACCCGCAGGTCCATCGGGGAGGGGGACAAGAAG
TCCAAGAAGAGCATGAAGACAGTGAAGATGCTTCACGCTCGCCAGTGCCA
CATGCTCCGCCAAGCGAGCGCCCTTCGTACCTCTAGTTCTTGCTCAGGGC
GAGCCTGGTCTCGGAATCGTGGGCGGCATGCCATCGACCTTGCTGCAGTA
CACCACCTCCCACCTCCTAACCGAGGCCTGCTAATCTGGTCATTATGCCA
TCTCCATCATGATGCCTTGCGAAGGAGAGAGGGCAGCGACTGCCGTACGC
CGCCCATACCCCGTGCAGCAGTGTTGTCATCGGGTATTGCCGGGGGCAAA
GGTCACACGTTAGCATTAGGTCGGGGCGTCTGGGGCGCAACAGCACGTGG
TCAGAGAGCTGCATTCAGCAGCGCGGACGGGGCGGGAGGCGGACTGGTGC
CCAAGAACAAGGCGGAGCAGGCGCAGGCCGGCATGGACGCCGAGACCCGC
AGGTCCATCGGGGAGGGGGACAAGAAGTCCAAGAAGAGCATGAAGACAGT
GAAGCTTGCGTTGGCCGGCAACCTGATCATCACTTTGGGCAAGTTCCTGG
CGTACCTGCACAGCGGCTCTAGCGCCATGAGCTCAGAAGCTATGCACTCC
CTCGTCGACTCGGCGAACCAACTTCTGCTCTTGGTGGGGCTCAGGAGTGC
CGCCACGGCTCCCGACAATCGGCATCAGTACGGATACGCTTGCGTTGGCC
GGCAACCTGATCATCACTTTGGGCAAGTTCCTGGCGTACCTGCACAGCGG
CTCTAGCGCCATGAGCTCAGAAGCTATGCACTCCCTCGTCGACTCGGCGA
ACCAACTTCTGCTCTTGGTGGGGCTCAGGAGTGCCGCCACGGCTCCCGAC
AATCGGCATCAGTACGGATACGGGAAGTCGGTGTACTTTTGGGCTCTTGT
GTCCGCGCTGGGGACGTTCTGGCTGGGCGCGGGGGTGTCCATGCGACATA
GCATAGAGGAGCTCGTCAACCCGACGGTGGCTTTGGACAAGGGAAGTCGG
TGTACTTTTGGGCTCTTGTGTCCGCGCTGGGGACGTTCTGGCTGGGCGCG
GGGGTGTCCATGCGACATAGCATAGAGGAGCTCGTCAACCCGACGGTGGC
TTTGGACAAGGTGGGAATGGAGGTGTGGTCTGTTCTAGGACTCAGTCTGC
TCATCGACGGCTTCGTCCTGGTGAAGACGTTCGAGAGCATCTGGAAGTCC
AAGCCCAAGAACGTCAGCTTGAAGAAGCATCTCAAGGACGTGGGAATGGA
GGTGTGGTCTGTTCTAGGACTCAGTCTGCTCATCGACGGCTTCGTCCTGG
TGAAGACGTTCGAGAGCATCTGGAAGTCCAAGCCCAAGAACGTCAGCTTG
AAGAAGCATCTCAAGGACATCCGAGACCCTACCACGCTGGCTGTCCTACT
CGAGGATGGCGGGGCGTGCCTGGGCGTGCTCATGGCCATCGGTGGCATCG
GATCCGAGACCCTACCACGCTGGCTGTCCTACTCGAGGATGGCGGGGCGT
GCCTGGGCGTGCTCATGGCCATCGGTGGCATCGGGCTGAGCCAGTACTAC
CATAGCCCGGTGTTCGACAGTCTGGCTGGCGTGAGCATCGCGGGGCTGCT
AGGGATCATGGGGCTGGTGCTGACTGAGGCTGAGCCAGTACTACCATAGC
CCGGTGTTCGACAGTCTGGCTGGCGTGAGCATCGCGGGGCTGCTAGGGAT
CATGGGGCTGGTGCTGACTGAGGTGAATCGCCGCTTTTTGATCGGGCAGT
CCGTCGACGCGGAGACCACGGAGGGCATCAAGGCGATCCTCATGAGCAGG
GGGTCCATCGAACAGCTGCACCAGGTGAATCGCCGCTTTTTGATCGGGCA
GTCCGTCGACGCGGAGACCACGGAGGGCATCAAGGCGATCCTCATGAGCA
GGGGGTCCATCGAACAGCTGCACCAGGTACAATCGCAGTGGGTGGGGACG
CACACCTTCGCCTTCAAGGCGGAGGTCGACTTCGATGGCACCTTCCTCGC
CGCGAAGCTCCAGCTTAACACCAGGTACAATCGCAGTGGGTGGGGACGCA
CACCTTCGCCTTCAAGGCGGAGGTCGACTTCGATGGCACCTTCCTCGCCG
CGAAGCTCCAGCTTAACACCAGGTACGGTCAGGAGTTCAGGCAGCTGCTA
GCTCGACCTCCGGACGACAAAACGAAGTACAAGGACCTCGAGACGCTGTT
GTCCTTCTACACCGAGGATGTCATGCGGGCGGCAGAACGAGAGGTACGGT
CAGGAGTTCAGGCAGCTGCTAGCTCGACCTCCGGACGACAAAACGAAGTA
CAAGGACCTCGAGACGCTGTTGTCCTTCTACACCGAGGATGTCATGCGGG
CGGCAGAACGAGAGGTGCGCGAGGCGGAGACCGAGATCCGCAAAAAGTAC
CCGGAGGCGGCGTTCATCGAGCTGGAGCCGGATAGCAGCACCCACGACAT
GTTCGCTCTCGAGCAGTTCCAGACCCCCGCCCTGCGAAAGGTGCGCGAGG
CGGAGACCGAGATCCGCAAAAAGTACCCGGAGGCGGCGTTCATCGAGCTG
GAGCCGGATAGCAGCACCCACGACATGTTCGCTCTCGAGCAGTTCCAGAC
CCCCGCCCTGCGAAAGGTGGAAGAAACGACGCTTAACCAAATGCTGGCGA
ACCTAGTGATCGCGAAGAAGGCTGCCGCAGCTGCCGCCGCTGCTGAGGCG
AAGGCGCGCAAAGAGAAAGATAGGACAAAAAACACCAGCAGGACCAAGAA
CGATGACGACGAAGCTGGGAGGCGGGAAGCCGAGCGCATAGACGCGGCCA
TTGCCGCCGATGATCTGCGGAGAAAGCAGGGCGGGGAAGGCGAGGATACA
GCGAATGGAGGGCCAGGGGTGCAGGGCGGGCTGGGAAGCCGCCGATAGGT
GGAAGAAACGACGCTTAACCAAATGCTGGCGAACCTAGTGATCGCGAAGA
AGGCTGCCGCAGCTGCCGCCGCTGCTGAGGCGAAGGCGCGCAAAGAGAAA
GATAGGACAAAAAACACCAGCAGGACCAAGAACGATGACGACGAAGCTGG
GAGGCGGGAAGCCGAGCGCATAGACGCGGCCATTGCCGCCGATGATCTGC
GGAGAAAGCAGGGCGGGGAAGGCGAGGATACAGCGAATGGAGGGCCAGGG
GTGCAGGGCGGGCTGGGAAGCCGCCGATAG
back to top