mRNA_P-fluviatile_contig18.3121.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig18.3121.1 vs. uniprot
Match: D7G7U6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U6_ECTSI) HSP 1 Score: 389 bits (999), Expect = 4.540e-121 Identity = 282/571 (49.39%), Postives = 344/571 (60.25%), Query Frame = 1
Query: 433 SFDALGALPSFPAATTHEPSVRASMADPGRQQTHQPGHAHALAGEGIAQGTNRSTESGLGPGELQALERTTCDSDEELEAIRASVRSLRAQRAAVEKLKEKAKAEEGTAEVLRRRLEEAERRIRELRAQGGRDIVRRLMDEVTALRARLKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAASGRELASLSALLREANATIDATKGTAQSTVARHVEKLQAARRDIESLAIQKREAHKRLQELTSLCERQRAKLAEGSLRAKELERLASAAKEDTRLAEAQAARLQEIISAADRSRREEDADATIKLRSAVRQVEELKAELAGVKSQAAEKSRQLVRHRDQMSTFRQDVDRLRKATAQQGDLRQALRERDEIIRDLRQRLELERRERGQWGQARKQLLREFCAEEDKLRSTLQLAHKEGPQHQFQHEHRQRKSPPRQPHLDVGEPLAGCDLGRGRRKDSNLCRHS--TRYSSIRSI-----------DGFLRSDSSVDCHQEAKEGNDIEEGDALSDLGIG 2106
SFD LG LP+ P T EPS+ S GR Q+H H++AL GEGIA GT STESGL Q ER + DSD+ELEAIR SVRSLRAQRAAVEKLKEKA+ RAQGGRD+VRRLMDEVT LRARLKAT CAASGRELASLSALLREANAT+DA+KG+ Q+TVA+ EKL+AAR++ ESL +K + +R++ELTS+CERQR+KLA+ RA+ELERLASAAK++TRLA+ QAA+L+ +SAAD+ RREEDA ATIKLR+A RQVEEL++E+ VKS+AAEK+RQLVRHRD+MS FR+DV +LR+A QQGD+RQA+R+RDE IRDLR++LELERRERGQWGQARKQLL EFC EE+KLRSTLQ A Q Q R+ +Q L+ P D L RH +R+++IR+I + LR ++ V +E K D E G+ L DL G
Sbjct: 11 SFDVLGVLPTVPTTTPLEPSLIGSHTRTGRPQSH---HSYALGGEGIASGTGGSTESGL----EQGFERESYDSDQELEAIRGSVRSLRAQRAAVEKLKEKARLXXXXXXXXXXXXXXXXXXXXXXRAQGGRDVVRRLMDEVTELRARLKATSTAFQTRENSVADLREAVQTLTLDLRAGQEKARAQSRKLEQQ-----------------------------------CAASGRELASLSALLREANATLDASKGSMQATVAKQAEKLEAARKEKESLLFEKGQTQERVKELTSMCERQRSKLADAGHRARELERLASAAKKETRLAQEQAAKLKTELSAADKRRREEDAGATIKLRTAARQVEELRSEVVLVKSEAAEKARQLVRHRDEMSAFREDVSKLREAAVQQGDMRQAVRDRDETIRDLRRQLELERRERGQWGQARKQLLLEFCEEENKLRSTLQPA-------QHQEPRSTRRQGRKQAILEHAPPTGS---------DRRLTRHKPLSRHATIRNIRTNGDSRRSSANSSLRGEACV-AREEEKVFGDSEAGEVLLDLAGG 522 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3121.1 >prot_P-fluviatile_contig18.3121.1 ID=prot_P-fluviatile_contig18.3121.1|Name=mRNA_P-fluviatile_contig18.3121.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=604bp MFAPSGSWMMNLERERAKDSREFPSFDALGALPSFPAATTHEPSVRASMAback to top mRNA from alignment at P-fluviatile_contig18:223335..230664+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig18.3121.1 ID=mRNA_P-fluviatile_contig18.3121.1|Name=mRNA_P-fluviatile_contig18.3121.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7330bp|location=Sequence derived from alignment at P-fluviatile_contig18:223335..230664+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig18:223335..230664+ >mRNA_P-fluviatile_contig18.3121.1 ID=mRNA_P-fluviatile_contig18.3121.1|Name=mRNA_P-fluviatile_contig18.3121.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3624bp|location=Sequence derived from alignment at P-fluviatile_contig18:223335..230664+ (Porterinema fluviatile SAG_2381)back to top |