mRNA_P-fluviatile_contig18.3117.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig18.3117.1 vs. uniprot
Match: A0A6H5KZF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF3_9PHAE) HSP 1 Score: 473 bits (1217), Expect = 9.300e-153 Identity = 268/401 (66.83%), Postives = 293/401 (73.07%), Query Frame = 1
Query: 142 TRRRVRAAAALSLAGASLASSGRCGGVVGVDAFYSG----GGSTPLAFAPPLARPWIARSVNRRQYGAPLSLSGR-VHVREGSGCDSDRTRSAAAPSLPRV--AWGALGASPGSRRRG-----STFSMAA--DDAGEKLSSAGTAEGVVEVETFMPAAIQDALPEEIQKELFLINRDPAKLNYVLNAAVIFLFVAFAAFKLATVDGDIARGWTWWEVLLRVPGDNFYRYETTVSESPIPTKALTSCVAYGLGDLTAQLFTGKTLETIDLTRTARSATAGLLVHGPLCHFWIELMQKYLDFDGAWWNVFPKVIADQTVWSVFLNAAYSTMIMGLQGKSPEEVWGHVRDTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRE 1302
TR+R AAA +L AS+ C +AF S G S LAFAP + W+A+ Q A + GR + VRE AAA S+ + AWG S SR+RG S SM A +DAG+ SS EG EVE FMPA +Q ALP E QK+L IN+DPAKL + +NAAV+FLF AFAAFKLATVDGDIARGWTW+EVLLRVPGDNFYRYE TVSESPI TKALTSCVAYGLGD TAQLFTGKTLE +DL RTARSATAGLL+HGPLCHFWIELMQ YLDFDGAWWN PKVIADQTVWSVFLNAAYSTMIM LQG EEVWG V+ AWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDR+
Sbjct: 4 TRQRATRAAAAALIAASI-----CCRHTAAEAFTSSSRSRGASNHLAFAPAHGQSWLAQPRASHQSAASSTGRGRRIDVRERR--SHGYGPGAAAHSVFELPSAWGR---SARSRQRGRGSSTSKLSMMASVEDAGDASSSL---EGDEEVEPFMPAPLQGALPAEWQKKLSQINKDPAKLTFFMNAAVVFLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKALTSCVAYGLGDFTAQLFTGKTLENMDLMRTARSATAGLLIHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGLPKEEVWGEVKSKAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQ 391
BLAST of mRNA_P-fluviatile_contig18.3117.1 vs. uniprot
Match: D7G7V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7V0_ECTSI) HSP 1 Score: 456 bits (1172), Expect = 6.050e-148 Identity = 225/271 (83.03%), Postives = 236/271 (87.08%), Query Frame = 1
Query: 490 AADDAGEKLSSAGTAEGVVEVETFMPAAIQDALPEEIQKELFLINRDPAKLNYVLNAAVIFLFVAFAAFKLATVDGDIARGWTWWEVLLRVPGDNFYRYETTVSESPIPTKALTSCVAYGLGDLTAQLFTGKTLETIDLTRTARSATAGLLVHGPLCHFWIELMQKYLDFDGAWWNVFPKVIADQTVWSVFLNAAYSTMIMGLQGKSPEEVWGHVRDTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRE 1302
A +DAGE SS +G EVE FMPA +QDALP E QK+L IN DPAKL + LNAAV+FLF AFAAFKLATVDGDIARGWTW+EVLLRVPGDNFYRYE TVSESPI TKA TSCVAYGLGD TAQLFTGKTLE +DL RTARSATAGLL+HGPLCHFWIELMQ YLDFDGAWWN PKVIADQTVWSVFLNAAYSTMIM LQG EEVWG V+ AWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDR+
Sbjct: 4 AVEDAGEASSSL---KGDEEVEPFMPAPLQDALPAEWQKKLSQINNDPAKLTFFLNAAVVFLFAAFAAFKLATVDGDIARGWTWYEVLLRVPGDNFYRYEATVSESPIVTKAFTSCVAYGLGDFTAQLFTGKTLEDMDLMRTARSATAGLLIHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGLPKEEVWGEVKSKAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQ 271
BLAST of mRNA_P-fluviatile_contig18.3117.1 vs. uniprot
Match: A0A836CBY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBY7_9STRA) HSP 1 Score: 311 bits (796), Expect = 1.220e-92 Identity = 153/248 (61.69%), Postives = 185/248 (74.60%), Query Frame = 1
Query: 622 NRDPAKLNYVLNAAVIFLFVAFAAFKLATVDGDIARGWTWWEVLLRVPGDNFYRYETTVSESPIPTKALTSCVAYGLGDLTAQLFTGKTLETIDLTRTARSATAGLLVHGPLCHFWIELMQKYLDFDGAWWNVFPKVIADQTVWSVFLNAAYSTMIMGLQG-KSPEEVWGHVRDTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRERPEEVAALEGG---EQGGSL 1353
+ DP + N VLN V+ V A +K+ TVD D++RGWT WE++LRVP DN + YE++V+ + +PTKA TS VAYG+GD AQ G+TLETIDL RTARSA AGL VHGP+CHFWIE MQ LDF+GAWWN PKV+ADQTV+S+ LNAAY++ ++GL G K P E+W +V+ T PA+TSSWRFWPLIHC SFS IPKD KLLFID MEIIWVTILS+VAN D+E A EGG E GG L
Sbjct: 116 SSDPKRRNAVLNLLVVGALVGGALYKVVTVDADLSRGWTIWEIILRVPSDNLWSYESSVTHNAVPTKAATSMVAYGIGDFLAQCLRGETLETIDLKRTARSAAAGLFVHGPMCHFWIEWMQANLDFNGAWWNFLPKVVADQTVYSLVLNAAYTSFVIGLSGEKKPSEIWDYVKTTCVPAITSSWRFWPLIHCLSFSTLIPKDFKLLFIDLMEIIWVTILSSVANKDQE-----AVAEGGSGPEGGGGL 358
BLAST of mRNA_P-fluviatile_contig18.3117.1 vs. uniprot
Match: A0A7S0PIM0_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0PIM0_MICPS) HSP 1 Score: 262 bits (669), Expect = 7.390e-74 Identity = 123/266 (46.24%), Postives = 174/266 (65.41%), Query Frame = 1
Query: 619 INRDPAKLNYVLNAAVIFLFVAFAAFKLATVDGDIARGWTWWEVLLRVPGDNFYRYETTVSESPIPTKALTSCVAYGLGDLTAQLFTGKTLETIDLTRTARSATAGLLVHGPLCHFWIELMQKYLDFDGAWWNVFPKVIADQTVWSVFLNAAYSTMIMGLQGKSPEEVWGHVRDTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRERPEEVAALEGGEQGGSLEAASAVAMKPGEIESEKLDNE 1416
I+ + ++N LN ++ A F++ VD DI++GWT WE+L +P DN Y+ +V ++P+PTKALTS VAY LGD T QL GK + T+DL R+ RS AG L+HGPLCH+W++ ++ L FDGA W + KVIADQT WS+FLN+AY+T IM LQG PE + G ++ T W A+T+ WRFWP +H +FS IP+D KLLF+DC+E++WVTILS N D E+ +V +A A +PG +E++D++
Sbjct: 96 IDDNSVEVNAALNVLIVGSVAFGAVFQIVEVDSDISKGWTAWEILRNIPRDNLEAYQQSVFDNPLPTKALTSGVAYTLGDFTCQLSQGKKITTVDLKRSLRSGIAGFLIHGPLCHYWLQWTEENLSFDGALWAIPVKVIADQTAWSLFLNSAYTTCIMSLQGMGPERIKGEIQATWWNAITAGWRFWPFVHTLTFSPIIPQDFKLLFVDCVEVVWVTILSAAVNRDSEKALQV-------------PLNAEAERPGVQLTEQMDSQ 348
BLAST of mRNA_P-fluviatile_contig18.3117.1 vs. uniprot
Match: C1N0U7_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N0U7_MICPC) HSP 1 Score: 254 bits (649), Expect = 3.310e-71 Identity = 121/266 (45.49%), Postives = 169/266 (63.53%), Query Frame = 1
Query: 619 INRDPAKLNYVLNAAVIFLFVAFAAFKLATVDGDIARGWTWWEVLLRVPGDNFYRYETTVSESPIPTKALTSCVAYGLGDLTAQLFTGKTLETIDLTRTARSATAGLLVHGPLCHFWIELMQKYLDFDGAWWNVFPKVIADQTVWSVFLNAAYSTMIMGLQGKSPEEVWGHVRDTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRERPEEVAALEGGEQGGSLEAASAVAMKPGEIESEKLDNE 1416
+ ++ K++ +LN A++ A F + VD DI+ GWTW+EVL +P DN Y++ V P+P KA+TS VAY LGD T QL GKT+ET+DL R+ARS AG L+HGPLCH+W+ + L FDGAW+ K+IADQT WS+FLN+AY+T IM LQG P + ++ T + A+++ W+FWP +H +FS+ IP+D KLLF+DC+E+IWVTILS N D E+ +V +A A +P E+LD E
Sbjct: 93 LKKNSYKIDALLNIAIVGSVAGGAVFGIVEVDSDISTGWTWYEVLRNIPQDNLAAYQSAVFAHPLPVKAMTSGVAYTLGDFTCQLSQGKTIETVDLKRSARSGVAGFLIHGPLCHYWLMWTEANLSFDGAWYGTPVKIIADQTAWSLFLNSAYTTCIMSLQGFGPRRIKNEIQATWYNAISAGWKFWPFVHAFTFSSIIPQDFKLLFVDCVEVIWVTILSAAVNRDAEKALQV-------------PLNAEAERPAAQLQEQLDAE 345
BLAST of mRNA_P-fluviatile_contig18.3117.1 vs. uniprot
Match: A0A7S0SAT7_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SAT7_9CHLO) HSP 1 Score: 246 bits (629), Expect = 1.610e-68 Identity = 123/283 (43.46%), Postives = 169/283 (59.72%), Query Frame = 1
Query: 574 IQDALPEEIQKELF--LINRDPAKLNYVLNAAVIFLFVAFAAFKLATVDGDIARGWTWWEVLLRVPGDNFYRYETTVSESPIPTKALTSCVAYGLGDLTAQLFTGKTLETIDLTRTARSATAGLLVHGPLCHFWIELMQKYLDFDGAWWNVFPKVIADQTVWSVFLNAAYSTMIMGLQGKSPEEVWGHVRDTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRERPEEVAALEGGEQGGSLEAASAVAMKPGEIESEKLDNE 1416
+ DA E K F + +++ +N A++ + F++ VD DI+ GWTW+E+L +P DN Y+ V PIP KALTS VAY LGD T QL GK+L T+DL R+ RS AG L+HGPLCH+W++ L F GAWW + KV+ADQTVWS+FLN AY+T IM LQG P + + T + A+++ WRFWP +H +FS IP+D KLLF+DC+E++WVTILS N D ++ +V +A + PG E+LDNE
Sbjct: 90 VMDAGSPESVKAKFNAFFEENALQISAFVNIAIVGSVAFGSFFRIVEVDSDISTGWTWYEILRNIPEDNLNAYQQAVFAHPIPVKALTSGVAYTLGDFTCQLSQGKSLPTVDLKRSLRSGVAGFLIHGPLCHYWLQWTDLNLSFGGAWWAIPVKVLADQTVWSLFLNTAYTTCIMSLQGMRPANIKREIDATWYNAISAGWRFWPFVHLLTFSPIIPQDFKLLFVDCVEVVWVTILSAAVNRDSDKALQV-------------PLNAESEAPGVQMMEQLDNE 359
BLAST of mRNA_P-fluviatile_contig18.3117.1 vs. uniprot
Match: A0A061RIB7_9CHLO (Protein Mpv17 (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RIB7_9CHLO) HSP 1 Score: 245 bits (625), Expect = 4.790e-68 Identity = 120/223 (53.81%), Postives = 151/223 (67.71%), Query Frame = 1
Query: 652 LNAAVIFLFVAFAAFKLATVDGDIARGWTWWEVLLRVPGDNFYRYETTVSESPIPTKALTSCVAYGLGDLTAQLFTGKTLETIDLTRTARSATAGLLVHGPLCHFWIELMQKYLDFDGAWWNVFPKVIADQTVWSVFLNAAYSTMIMGLQGKSPEEVWGHVRDTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANG-DRERPEEV 1317
+N V+ L VA A +K VD D ARGWT E +LR D+F Y+ + S P TKA TS VAY LGD AQ F G+T+ T+DL R+ RS AG +HGPLCH WIE M+ +L F GAW++ F KVIADQTVWS+FLN Y++ I+ LQG P ++ VR T WPAL+S WRFWP +H SFS +P +LKLLFID MEI+WVTIL++V N D E+ +V
Sbjct: 103 INGTVVALIVAGATYKAVEVDLDYARGWTLMEFMLRTARDDFVMYQHSASLHPFITKACTSGVAYSLGDFAAQTFQGRTVFTVDLKRSLRSGIAGFFIHGPLCHLWIEWMEAHLSFGGAWYSTFAKVIADQTVWSIFLNTMYTSTILALQGTRPPKIAEEVRLTWWPALSSGWRFWPFVHTVSFSPYVPAELKLLFIDTMEIVWVTILASVVNRKDEEKVPQV 325
BLAST of mRNA_P-fluviatile_contig18.3117.1 vs. uniprot
Match: A0A7S2B582_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B582_9STRA) HSP 1 Score: 243 bits (620), Expect = 2.120e-67 Identity = 114/237 (48.10%), Postives = 164/237 (69.20%), Query Frame = 1
Query: 748 VLLRVPGDNFYRYETTVSESPIPTKALTSCVAYGLGDLTAQLFTGKTLETIDLTRTARSATAGLLVHGPLCHFWIELMQKYLDFDGAWWNVFPKVIADQTVWSVFLNAAYSTMIMGLQGKSPEEVWGHVRDTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRER----PEEVAALEGGEQGGSLEAASAVAMK--------PGEIESEKLDNEPI 1422
+LLR+P D ++YE V +P+ KA TS VAY +GD +Q++ G+TL+T+DL R+ARS TAG + HGPLCH+W++ M+ YLDF+GAWW KV+ADQTVWS++LNA YS +I L ++P++VW V+ T+WPAL +SWRFWP +HC SFS+A+P DLKLL++D MEI+WVT+LS VAN D++ + ++GG ++E A +A + G I +E +D E +
Sbjct: 132 LLLRLPSDLIHQYEALVPTNPVFYKACTSGVAYTIGDFVSQVYQGRTLKTLDLARSARSGTAGFVGHGPLCHYWMQFMETYLDFNGAWWGTGVKVLADQTVWSIYLNAMYSFLIGSLALRNPKDVWQDVKATSWPALRTSWRFWPFVHCISFSHAVPLDLKLLWVDVMEIVWVTLLSKVANDDKDANMASDKTACVVDGGNSDPAVEVAMTIASEREVTVVDGDGGISTESVDLEAM 368
BLAST of mRNA_P-fluviatile_contig18.3117.1 vs. uniprot
Match: A0A7R9W0S2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0S2_9STRA) HSP 1 Score: 238 bits (606), Expect = 2.490e-65 Identity = 122/234 (52.14%), Postives = 156/234 (66.67%), Query Frame = 1
Query: 646 YVLNAAVIFLFVAFAAFKLA-TVDGDIARGWTW---------------WEVLLRVPGDNFYRYETTVSESPIPTKALTSCVAYGLGDLTAQLFTGKTLETIDLTRTARSATAGLLVHGPLCHFWIELMQKYLDFDGAWWNVFPKVIADQTVWSVFLNAAYSTMIMGLQGKSPEEVWGHVRDTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDR 1299
+ +N+A++ V A ++L T G +A W + ++L R+P D ++YE V +PI KA TS VAYGLGD +Q++ GKTL T+DL R RS AG LVHGPLCHFW+ M+ YLDFDGAWW KV AD TVWS+FLNAAYST+I L G+SP++V VR T WPAL S+WRFWP +H SFS+A+P DLKLL++D ME+IWVTILS VAN D+
Sbjct: 107 FYVNSAIVSFLVLSAVYQLTHTHVGALAALWEYDLGPHPADMTKLTVAVDLLARLPFDLVHKYEALVPTNPIFYKACTSGVAYGLGDFISQVYQGKTLSTLDLPRPFRSGAAGFLVHGPLCHFWLLFMETYLDFDGAWWATGIKVTADLTVWSIFLNAAYSTVIGTLAGRSPKDVLTDVRATQWPALRSAWRFWPFVHTVSFSHAVPLDLKLLWVDFMEVIWVTILSKVANEDK 340
BLAST of mRNA_P-fluviatile_contig18.3117.1 vs. uniprot
Match: A0A7S3ZXF3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZXF3_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.390e-63 Identity = 136/312 (43.59%), Postives = 185/312 (59.29%), Query Frame = 1
Query: 448 ASPGSRRRGSTFSMAADDAGEKLSSAGTAEGVVEV-----ETFMPAAIQDALPEEIQKELFLINRDPAKLNYV--LNAAVIFLFVAFAAFKLATVDGDIA--------------------RGWTWWEVLLRVPGDNFYRYETTVSESPIPTKALTSCVAYGLGDLTAQLFTGKTLETIDLTRTARSATAGLLVHGPLCHFWIELMQKYLDFDGAWWNVFPKVIADQTVWSVFLNAAYSTMIMGLQGKSPEEVWGHVRDTAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRE 1302
A P +RRR + D AG++ S+A A+ V+ E M AA + A + L +I R LN + +NAAV+ ++L VD + R T ++L ++PGD+ YE V +P+ KA TS VAY LGD +Q++ G+TL+T+DL R+ARS AG + HGPLCH+W+ M+ YLDFDGAW+ KV+ADQTVWS++LNA YS +I + P EVW V+ T+WPAL SSWRFWP +HC SFS+ +P DLKLL++D MEI+WVTILS VAN D+E
Sbjct: 33 ARPTARRRTPVLAAVKDAAGDRPSTALAADTGVDYDDAAYEREMKAARRQAAADR----LAVIQR----LNLIAYVNAAVLAFVAIGVGYELLHVDVEAILALFKYTLPEDRPMEDALAYRLATSVDLLAKLPGDSIRGYEALVPTNPVFYKACTSGVAYTLGDFVSQVYQGRTLKTVDLARSARSGAAGFVGHGPLCHYWMVFMETYLDFDGAWYGTGVKVLADQTVWSLYLNACYSFLIGTFALRDPREVWKDVQATSWPALRSSWRFWPFVHCISFSHLVPLDLKLLWVDVMEIVWVTILSKVANDDKE 336 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3117.1 >prot_P-fluviatile_contig18.3117.1 ID=prot_P-fluviatile_contig18.3117.1|Name=mRNA_P-fluviatile_contig18.3117.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=433bp MPYTRRRVRAAAALSLAGASLASSGRCGGVVGVDAFYSGGGSTPLAFAPPback to top mRNA from alignment at P-fluviatile_contig18:184368..192434- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig18.3117.1 ID=mRNA_P-fluviatile_contig18.3117.1|Name=mRNA_P-fluviatile_contig18.3117.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8067bp|location=Sequence derived from alignment at P-fluviatile_contig18:184368..192434- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig18:184368..192434- >mRNA_P-fluviatile_contig18.3117.1 ID=mRNA_P-fluviatile_contig18.3117.1|Name=mRNA_P-fluviatile_contig18.3117.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2598bp|location=Sequence derived from alignment at P-fluviatile_contig18:184368..192434- (Porterinema fluviatile SAG_2381)back to top |