mRNA_P-fluviatile_contig18.3111.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig18.3111.1 vs. uniprot
Match: D7G7V6_ECTSI (Acyl carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V6_ECTSI) HSP 1 Score: 206 bits (523), Expect = 5.430e-66 Identity = 117/144 (81.25%), Postives = 128/144 (88.89%), Query Frame = 1
Query: 1 MQRVVAAALGRSVCLSAQRAVSGA-QARSLQHLHKSWQ-APIA-VRQFHFSRPVAGAAGETFLDKGETTARILAVVKNFEKVDPTKVTETALFKEDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIVSHPAAK 423
MQRV AALGR+ CL+A+RA S A + RSLQ LH SWQ AP A VR FHFSRPVAGAAG+TFLDKG+ TARI+AVVK FEKVDPTKV+E ALFK+DL+LDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYI+SHPAAK
Sbjct: 1 MQRVAVAALGRAACLTARRAGSAAARGRSLQ-LHNSWQQAPAAAVRHFHFSRPVAGAAGDTFLDKGDATARIIAVVKAFEKVDPTKVSENALFKDDLALDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIISHPAAK 143
BLAST of mRNA_P-fluviatile_contig18.3111.1 vs. uniprot
Match: A0A1E7ETX9_9STRA (Acyl carrier protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETX9_9STRA) HSP 1 Score: 123 bits (309), Expect = 9.620e-34 Identity = 65/87 (74.71%), Postives = 70/87 (80.46%), Query Frame = 1
Query: 163 AGETFLDKGETTARILAVVKNFEKVDPTKVTETALFKEDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIVSHPAAK 423
A TFLD GE + RI VVKNF+KVD K+TETA F EDL LDSLDAVEVVMAIEDEF IEIPD+EADKI +ADAV YIVSHP AK
Sbjct: 35 AASTFLDAGEVSTRIQGVVKNFDKVDQNKITETAKFTEDLGLDSLDAVEVVMAIEDEFAIEIPDAEADKILSVADAVEYIVSHPMAK 121
BLAST of mRNA_P-fluviatile_contig18.3111.1 vs. uniprot
Match: A0A7S2SKU6_9STRA (Acyl carrier protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SKU6_9STRA) HSP 1 Score: 121 bits (304), Expect = 5.850e-33 Identity = 67/110 (60.91%), Postives = 77/110 (70.00%), Query Frame = 1
Query: 94 LHKSWQAPIAVRQFHFSRPVAGAAGETFLDKGETTARILAVVKNFEKVDPTKVTETALFKEDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIVSHPAAK 423
L + Q P +R F AAG TFLD E T RI++VVKNF+KVDP V + F++DL LDSLD+VEVVMAIEDEF IEIPD+EADKIA IADAV YI HP AK
Sbjct: 22 LRQQQQQPFLIRNF--------AAGSTFLDPSEVTDRIVSVVKNFDKVDPANVQPESKFEDDLGLDSLDSVEVVMAIEDEFAIEIPDAEADKIASIADAVEYIAGHPMAK 123
BLAST of mRNA_P-fluviatile_contig18.3111.1 vs. uniprot
Match: A0A7S0UFZ0_9STRA (Acyl carrier protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFZ0_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.440e-32 Identity = 63/93 (67.74%), Postives = 71/93 (76.34%), Query Frame = 1
Query: 145 RPVAGAAGETFLDKGETTARILAVVKNFEKVDPTKVTETALFKEDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIVSHPAAK 423
+P+ A TFLD GE RI V+KNF+KVD KVT+TA F +DL LDSLDAVEVVMAIEDEF IEIPD+EADKI +ADAV YI SHP AK
Sbjct: 26 QPLRTFAASTFLDSGEVAGRITGVIKNFDKVDGNKVTDTAKFTDDLGLDSLDAVEVVMAIEDEFAIEIPDAEADKILSVADAVEYISSHPMAK 118
BLAST of mRNA_P-fluviatile_contig18.3111.1 vs. uniprot
Match: A0A6U3TJ47_9STRA (Acyl carrier protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TJ47_9STRA) HSP 1 Score: 119 bits (299), Expect = 3.560e-32 Identity = 73/133 (54.89%), Postives = 85/133 (63.91%), Query Frame = 1
Query: 25 LGRSVCLSAQRAVSGAQARSLQHLHKSWQAPIAVRQFHFSRPVAGAAGETFLDKGETTARILAVVKNFEKVDPTKVTETALFKEDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIVSHPAAK 423
L + L+ + A S + L +S Q P+ VR F S TF+D E T RILAVVKNF+KVD KVT + F +DL LDSLDAVEVVMAIEDEF IEIPD+EADKI+ IADAV YI HP AK
Sbjct: 2 LSAAARLAVRSAASRGNVMAATSLLRSQQQPMIVRTFAVS---------TFVDPAEATDRILAVVKNFDKVDQGKVTPESKFADDLGLDSLDAVEVVMAIEDEFAIEIPDAEADKISSIADAVEYIAGHPMAK 125
BLAST of mRNA_P-fluviatile_contig18.3111.1 vs. uniprot
Match: A0A6U6F713_9STRA (Acyl carrier protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6F713_9STRA) HSP 1 Score: 118 bits (296), Expect = 9.560e-32 Identity = 64/101 (63.37%), Postives = 72/101 (71.29%), Query Frame = 1
Query: 121 AVRQFHFSRPVAGAAGETFLDKGETTARILAVVKNFEKVDPTKVTETALFKEDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIVSHPAAK 423
A +S+PV A TFL+ E T RI+ VVKNF+KVDP KV + F EDL LDSLD+VEVVMAIEDEF IEIPD+EADKIA I DAV YI HP AK
Sbjct: 23 AFASLRYSQPVRTFAATTFLNPEEVTDRIVTVVKNFDKVDPDKVESASKFAEDLGLDSLDSVEVVMAIEDEFAIEIPDAEADKIASIEDAVEYIAGHPMAK 123
BLAST of mRNA_P-fluviatile_contig18.3111.1 vs. uniprot
Match: A0A059LDR7_9CHLO (Acyl carrier protein n=2 Tax=unclassified Helicosporidium TaxID=2626013 RepID=A0A059LDR7_9CHLO) HSP 1 Score: 118 bits (295), Expect = 1.620e-31 Identity = 57/91 (62.64%), Postives = 76/91 (83.52%), Query Frame = 1
Query: 151 VAGAAGETFLDKGETTARILAVVKNFEKVDPTKVTETALFKEDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIVSHPAAK 423
V G A ++LDK + T+R+LA+VKNFEKVDP KVTE+A F++DL LDSLD VE+VMA+E+EF IEIPD+EADKI +++AV+Y+ S+P AK
Sbjct: 39 VRGFADSSYLDKSDVTSRVLAIVKNFEKVDPAKVTESAAFQKDLGLDSLDTVELVMALEEEFAIEIPDAEADKILSVSEAVSYVASNPLAK 129
BLAST of mRNA_P-fluviatile_contig18.3111.1 vs. uniprot
Match: A0A7S2EA28_TRICV (Acyl carrier protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EA28_TRICV) HSP 1 Score: 117 bits (292), Expect = 3.860e-31 Identity = 62/94 (65.96%), Postives = 70/94 (74.47%), Query Frame = 1
Query: 142 SRPVAGAAGETFLDKGETTARILAVVKNFEKVDPTKVTETALFKEDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIVSHPAAK 423
++PV A TFL E T RI++VVKNF+KVDP KV T+ F EDL LDSLD+VEVVMAIEDEF IEIPD+EADKI I DAV YI HP AK
Sbjct: 30 AQPVRTFAASTFLSPNEVTERIVSVVKNFDKVDPGKVAPTSKFAEDLGLDSLDSVEVVMAIEDEFAIEIPDAEADKIVSIGDAVEYIAGHPMAK 123
BLAST of mRNA_P-fluviatile_contig18.3111.1 vs. uniprot
Match: A0A6U0HED3_9STRA (Acyl carrier protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0HED3_9STRA) HSP 1 Score: 116 bits (290), Expect = 6.900e-31 Identity = 65/105 (61.90%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 109 QAPIAVRQFHFSRPVAGAAGETFLDKGETTARILAVVKNFEKVDPTKVTETALFKEDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIVSHPAAK 423
Q P+ VR F A TF+D E T RI+ VVKNF+KVDP+KV+ + F +DL LDSLDAVEVVMAIEDEF IEIPD+EADKI+ IADAV YI HP AK
Sbjct: 24 QQPMIVRTF---------AASTFVDPTEATDRIVQVVKNFDKVDPSKVSPESKFADDLGLDSLDAVEVVMAIEDEFAIEIPDAEADKISSIADAVEYIAGHPMAK 119
BLAST of mRNA_P-fluviatile_contig18.3111.1 vs. uniprot
Match: A0A7S2LP29_9STRA (Acyl carrier protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LP29_9STRA) HSP 1 Score: 116 bits (291), Expect = 6.920e-31 Identity = 64/98 (65.31%), Postives = 73/98 (74.49%), Query Frame = 1
Query: 130 QFHFSRPVAGAAGETFLDKGETTARILAVVKNFEKVDPTKVTETALFKEDLSLDSLDAVEVVMAIEDEFTIEIPDSEADKIAGIADAVAYIVSHPAAK 423
+ +FSR AG G +FLD GE T RI+ VVKNF+KVDP KV ++ F +DL LDSLD VEVVMAIEDEF IEIPD EADKIA I DA YI +HP AK
Sbjct: 36 RLNFSRGFAG--GTSFLDAGEVTERIVQVVKNFDKVDPAKVHASSKFVDDLGLDSLDTVEVVMAIEDEFAIEIPDVEADKIASITDATEYIAAHPMAK 131 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3111.1 >prot_P-fluviatile_contig18.3111.1 ID=prot_P-fluviatile_contig18.3111.1|Name=mRNA_P-fluviatile_contig18.3111.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=142bp MQRVVAAALGRSVCLSAQRAVSGAQARSLQHLHKSWQAPIAVRQFHFSRPback to top mRNA from alignment at P-fluviatile_contig18:156119..158779+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig18.3111.1 ID=mRNA_P-fluviatile_contig18.3111.1|Name=mRNA_P-fluviatile_contig18.3111.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2661bp|location=Sequence derived from alignment at P-fluviatile_contig18:156119..158779+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig18:156119..158779+ >mRNA_P-fluviatile_contig18.3111.1 ID=mRNA_P-fluviatile_contig18.3111.1|Name=mRNA_P-fluviatile_contig18.3111.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=852bp|location=Sequence derived from alignment at P-fluviatile_contig18:156119..158779+ (Porterinema fluviatile SAG_2381)back to top |