mRNA_P-fluviatile_contig18.3103.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig18.3103.1 vs. uniprot
Match: A0A6H5L268_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L268_9PHAE) HSP 1 Score: 451 bits (1161), Expect = 5.030e-145 Identity = 380/653 (58.19%), Postives = 427/653 (65.39%), Query Frame = 3
Query: 30 LSRKEKLALWRAQKAGPGGASTSXXXXXXXXAGGARTL-------GKGKPGGGALAARPGAGNVMQDVRRATTHAPKEGPKRKPFQVDTRSVREASERRVAPGTPIHSLKKRLKRTSEAIETAPAXXXXXXXXXXXXAGGGADALIPTARAQGKAKAAVAARVPGHVNGVSRSLDSARMKEVSDHLKSQISEANMLLEIAGVDAARTLLAALLSCAGAGRGVGELALYWAARAKLEEEAGFYSEARHLLGEGEAYISMPTQQKVMSKVIAAFEGRMNDREEVEVARLLEDSVGSLSLNDSGANSNSPGSTAPYRYDPNDPSMDDGEDSGSPRSAIKNLNFSRIAKES--EGGGSVGGRSKIEATGEDSYKNFV-------------------------SSGSANSVDGGGSGSGGGVASMTGVIFSDDDSDCSVSDIDEGVIARAKAFEAEEEARKAR-------------AKTLPPDEQDLKEQEFSQEAAHCAAASVP---------ARQPSAGLEDNNDDGIASRNGRNGHGKNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------GTPHPKP-VKRNTPRRGIKAD-EDLSPGSFFAQVEAKGKDGKRTLTPVRRSRRISGVSKEPTPAQLRKEMEAML 1793
LSRKEKLA WRA K P A + XXXXXXX GK G L ARPGAGN+ V + T AP P+RKPFQVDTRS+++ASERRV PGTPIHSLKKRLKRT A+ XXXXXXXXXXXX ARVPGH+NGVSRSLDSAR KEVSD+LKSQISEANMLLEIAGVDAARTLL LL AG GRGVGELALYWAARAKLEE+AG Y EAR LL +GEAYISMPTQQKVM+KV+AAFEGRMN R E ++ RLLEDSV LSLN+S ANSNSP S+AP+RYDPND S +D D+GS +SAIKNLNFS+IAKES GG SV S+ ++ S N S +++ GG + SG G+ S +GVI+SDDDSD SVSDIDEGVIARA AF AEE+ARKAR A+ + D K+ +E A VP AR+ +AG ++ A ++G NG + G XXXXXXXXXXXXXXXXXXXXXXXXXXX GTPHPKP VKR TPRRG D E+LSPGSF QVE GKDGKRTLTPVRRSRRISGV+KEPTPA LRKEMEAML
Sbjct: 5 LSRKEKLAAWRAAKGKPLEAHKAAXXXXXXXXXXXXXXXXXXGRAGKKDVAKGVLQARPGAGNM---VNKRT--AP---PQRKPFQVDTRSIQQASERRVQPGTPIHSLKKRLKRT--AVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVPGHMNGVSRSLDSARTKEVSDYLKSQISEANMLLEIAGVDAARTLLGDLLYSAGGGRGVGELALYWAARAKLEEDAGMYLEARKLLDDGEAYISMPTQQKVMAKVVAAFEGRMNARAEADIDRLLEDSVDGLSLNNSAANSNSPASSAPFRYDPNDLSTED--DTGSAQSAIKNLNFSKIAKESGGRGGASVDRASRAGSSTSGSGSNTSLTTRSGASPDWMRGANEEVEEDEKDSQAASSGAKGGATASGEGIESFSGVIYSDDDSDLSVSDIDEGVIARANAFAAEEDARKARMEAEEAGRVPGGVARDVVDDGAGAKDGSLREEDV---VAEVPEGADLDAGAAREATAGNDER-----AKKSGANGDSNDRGVSSTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTPHPKPLVKRTTPRRGKDVDGEELSPGSFITQVEGTGKDGKRTLTPVRRSRRISGVAKEPTPALLRKEMEAML 637
BLAST of mRNA_P-fluviatile_contig18.3103.1 vs. uniprot
Match: D7G7W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W5_ECTSI) HSP 1 Score: 328 bits (840), Expect = 1.290e-100 Identity = 235/351 (66.95%), Postives = 254/351 (72.36%), Query Frame = 3
Query: 30 LSRKEKLALWRAQKAGPGGASTSXXXXXXXXAGGARTL-------GKGKPGGGALAARPGAGNVMQDVRRATTHAPKEGPKRKPFQVDTRSVREASERRVAPGTPIHSLKKRLKRTSEAIETAPAXXXXXXXXXXXXAGGGADALIPTARAQGKAKAAVAARVPGHVNGVSRSLDSARMKEVSDHLKSQISEANMLLEIAGVDAARTLLAALLSCAGAGRGVGELALYWAARAKLEEEAGFYSEARHLLGEGEAYISMPTQQKVMSKVIAAFEGRMNDREEVEVARLLEDSVGSLSLNDSGANSNSPGSTAPYRYDPNDPSMDDGEDSGSPRSAIKNLNFSRIAKESEGGG 1061
LSRKEKLA WRA K P A XXXXXX GK G L ARPGAGN V + T AP P+RKPFQVDTRS+++ASERRV PGTPIHSLKKRLKRT+ A XXXXXXXXXXXX A RVPGHVNGVSRSLDSAR KEVSD+LKSQISEANMLLEIAGVDAARTLL LLSCAGAGRGVGELALYWAARAKLEE+AG Y EAR LL +GEAYISMPTQQKVM+KV+AAFEGRMN R E ++ RLLEDSV LSLNDS ANSNSP S+ P+RYDPND S +D D+GS +SAIKNLNFS+IAKES G G
Sbjct: 5 LSRKEKLAAWRAAKGKPLEAHKPAAXXXXXXXXXXXXXXXXXGRAGKKDVAKGVLQARPGAGNR---VNKRT--AP---PQRKPFQVDTRSIQQASERRVQPGTPIHSLKKRLKRTAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-RVPGHVNGVSRSLDSARTKEVSDYLKSQISEANMLLEIAGVDAARTLLGDLLSCAGAGRGVGELALYWAARAKLEEDAGMYLEARKLLDDGEAYISMPTQQKVMAKVMAAFEGRMNARAEADIDRLLEDSVDGLSLNDSAANSNSPASSTPFRYDPNDLSTED--DTGSAQSAIKNLNFSKIAKESGGRG 344 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3103.1 >prot_P-fluviatile_contig18.3103.1 ID=prot_P-fluviatile_contig18.3103.1|Name=mRNA_P-fluviatile_contig18.3103.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=592bp MNGLSRKEKLALWRAQKAGPGGASTSSTSAASASAGGARTLGKGKPGGGAback to top mRNA from alignment at P-fluviatile_contig18:100836..116880- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig18.3103.1 ID=mRNA_P-fluviatile_contig18.3103.1|Name=mRNA_P-fluviatile_contig18.3103.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=16045bp|location=Sequence derived from alignment at P-fluviatile_contig18:100836..116880- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig18:100836..116880- >mRNA_P-fluviatile_contig18.3103.1 ID=mRNA_P-fluviatile_contig18.3103.1|Name=mRNA_P-fluviatile_contig18.3103.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3552bp|location=Sequence derived from alignment at P-fluviatile_contig18:100836..116880- (Porterinema fluviatile SAG_2381)back to top |