mRNA_P-fluviatile_contig18.3101.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig18.3101.1 vs. uniprot
Match: A0A6H5JEC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEC7_9PHAE) HSP 1 Score: 361 bits (926), Expect = 1.300e-113 Identity = 208/401 (51.87%), Postives = 260/401 (64.84%), Query Frame = 1
Query: 136 ALGSLVLTVFCGTVARAIGW--KDCSMLPTDQWRQAAEPTLARIMREEYSRRYTCPNQA-ASLMATDYFFDSACVAKRFS-SAEVHSCLQGRRVVFLGDSLSNQQGDSLVGMLGWHPDWMPLGAPRNSKMANDKDGNRYATLLDCWHPGEEDEVRGVERCYDIYQRDFEPHPHEEEPAGNMPVLRGRISAKGVDTPENAGGHARRQRHGRHSKRRGL--GEGGXXXXXXXXXXXXXXXXEI-------SVHMRMSPFPSHSNWFGRNVVDYNGTRSGDVFVVNFGAHYRHTPEEDVRFKADIFSVLDEMGHFATETNATMVWREISPVHFPAENGSYDN-LGANYDSHACCTGIPPESLERNTWVDEYLEASGLADKVKVLRIYNMSFPRGAAHHTCFLAP 1296
A LVL + TVA GW +CS+ P D+W++A E TLA MR EY R YTC + AS MA +Y+FDS C+AKRF +V CL+GRRV+FLGDSLSNQQGDSLVGMLGWHP+WMP G PRN K A KDG RY TL+DCWHP + G+ERCYD+Y DF + P + G + G +H R ++RR L EGG XXXXXXXXXXXXXX SVH+RM+ +W R + DYN TR+ DV VVNFG HYR TPE + FK D+ S+LD+M ET AT+VWREI+P HFP ENG+Y++ + + ++ACCTG P + L+RN WV++Y+ +GL+D+VK+LRIY+MS PRGAAHHTC LAP
Sbjct: 34 ATTELVLVLIFLTVASPTGWGWNECSISPQDEWKEATEDTLAMRMRAEYERMYTCTTREDASFMAANYYFDSPCLAKRFFYPTDVRECLRGRRVIFLGDSLSNQQGDSLVGMLGWHPEWMPRGGPRNRKRAVRKDGTRYFTLVDCWHPPG-GSIPGIERCYDVYDTDFPFEGNHRSPGKPSLEIHGSTTDDGAFASTEG-------KHDRRTRRRSLEGDEGGVEXXXXXXXXXXXXXXXXTKANQTTSVHVRMTSTADDRHWLRRALRDYNETRASDVVVVNFGPHYRSTPEGEESFKRDVSSILDDMAEIG-ET-ATVVWREIAPTHFPGENGTYESFVELDLGNNACCTGTPVKVLDRNAWVEDYVRDNGLSDRVKLLRIYDMSVPRGAAHHTCHLAP 424
BLAST of mRNA_P-fluviatile_contig18.3101.1 vs. uniprot
Match: D7FXJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ3_ECTSI) HSP 1 Score: 345 bits (884), Expect = 3.030e-107 Identity = 194/424 (45.75%), Postives = 242/424 (57.08%), Query Frame = 1
Query: 136 ALGSLVLTVFCGT-VARAIGWKDCSMLPTDQWRQAAEPTLARIMREEYSRRYTCPNQAASLMATDYFFDSACVAKRFSSA-EVHSCLQGRRVVFLGDSLSNQQGDSLVGMLGWHPDWMPLGAPRNSKMANDKDGNRYATLLDCWHPGEEDEVRGVERCYDIYQRDFEPHPHE-----EEPAGNMPVLRGRISAKGVDTPENA----GG------------------------HARRQRHGRHSKRRGLGEGGXXXXXXXXXXXXXXXXEISVHMRMSPFPSHSNWFGRNVVDYNGTRSGDVFVVNFGAHYRHTPEEDVRFKADIFSVLDEMGHFATETNATMVWREISPVHFPAENGSYDNLGA--NYDSHACCTGIPPESLERNTWVDEYLEASGLADKVKVLRIYNMSFPRGAAHHTCFLAP 1296
A S++L F G V +A GW +C M P D W+ A + T A MR +Y RRYTC ++ AS +A Y F+S C A+RFS +V SCL+GRRV+FLGDSLSNQQGDSL+GMLGWHPDWM G PRN+K+ + DG RY TL+DCWHP ++GVERCYD DF P P + P+G + A+ +P GG AR G+ + EG EISVHMRM PS +W R V D+N TR+ D+FVVNFG HY PEED FK D+F +LDEM + AT+VWREI+P HFPA NGS+D + D A CTG PPE +RN WV+ Y+ +GL D++K+LRIY+MS PRGAAHHTC AP
Sbjct: 27 ATSSVIL--FLGVIVGKASGWVECLMPPQDAWKAATDTTPALRMRYDYERRYTCRDEKASFLAASYVFNSTCTARRFSGPPDVVSCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTKGNPRNAKVITE-DGKRYYTLVDCWHPS----IKGVERCYDYSTSDF-PGPTTLGQPGDGPSGEATTQSRKNMARSTTSPAKRRPPLGGTKADSTKSVXXXXXXXXXXXXRKMQAREWEDGQEAAEEAEAEG------YREEVEAVDESEISVHMRMLSKPSGEHWLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDDSFKRDVFPILDEMAVLGEK--ATVVWREIAPTHFPAVNGSFDAFDGLESKDRKASCTGTPPEVFDRNVWVENYVRDNGLEDRIKLLRIYDMSMPRGAAHHTCHFAP 434
BLAST of mRNA_P-fluviatile_contig18.3101.1 vs. uniprot
Match: D7FL04_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL04_ECTSI) HSP 1 Score: 331 bits (849), Expect = 9.360e-102 Identity = 203/442 (45.93%), Postives = 258/442 (58.37%), Query Frame = 1
Query: 136 ALGSLVLTVFCG---TVARAIGWKDCSMLPTDQWRQAAE--PTLARIMREEYSRRYTCPNQAASLMATDYFFDSACVAKRFSSA-EVHSCLQGRRVVFLGDSLSNQQGDSLVGMLGWHPDWMPLGAPRNSKMANDKDGNRYATLLDCWHPGEEDEVRGVERCYDIYQRDFEP-----HPHEEEPAGNMPVLRG--------RISAKG-----VDTPENAG----GHARR--QRHGRHSKRRGLGEG----------------------GXXXXXXXXXXXXXXXXEISVHMRMSPFPSHSNWFGRNVVDYNGTRSGDVFVVNFGAHYRHTPEEDVRFKADIFSVLDEMGHFATETNATMVWREISPVHFPAENGSYDNLGANYDSHAC---CTGIPPESLERNTWVDEYLEASGLADKVKVLRIYNMSFPRGAAHHTCFLAP 1296
A G LV +VF V +A GWK+CS+ P D+W A T A MR +Y RRYTC ++ AS +A Y+FDS C A+RF S +V SCL+GRRV+FLGDSLSNQQGDSL+GMLGWHPDWM GAPRNSK+ + +DG+++ TL+DC+HP + G++RCYD F P HP E + +R ++S +G + T + G GH RR QRHGR G G G XXXXXX EISVHMRM PS +W + D+N TR+ DVFVVNFG HY PE+D FK D+ VL +M NAT++WREI+P HFPA NGSYD+ A+ D+ CTG PP+ +RN WV+ Y+ +GL D++K+LRIY+MS PRGAAHHTC AP
Sbjct: 25 ASGLLVPSVFWFLGVVVGKASGWKECSVSPEDRWSPAPSRTSTAALRMRFDYERRYTCDSKHASYLAASYYFDSPCTARRFPSPPDVTSCLKGRRVIFLGDSLSNQQGDSLMGMLGWHPDWMTKGAPRNSKL-DIEDGSKHFTLVDCYHPS----LGGIQRCYDYSTSAFPPPAASDHPVSREKSRKKKSIRAGATSSEKVKLSMRGRTTTAIKTAQTKGTRGLGHKRRKSQRHGRWWXX-GEGHGQEEEEEVEXXXXXXXXXXXXXXXXXXXXXYGETFDVDGNEISVHMRMLSRPSGEHWLLKAASDFNETRASDVFVVNFGGHYHDIPEDDEEFKTDMIPVLQDMAVLGQ--NATVIWREIAPTHFPAANGSYDSY-ADLDAKDLTPRCTGTPPKVFDRNEWVENYVRDNGLEDRIKLLRIYDMSVPRGAAHHTCHFAP 457
BLAST of mRNA_P-fluviatile_contig18.3101.1 vs. uniprot
Match: A0A6H5KLA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLA9_9PHAE) HSP 1 Score: 311 bits (798), Expect = 2.080e-94 Identity = 184/431 (42.69%), Postives = 231/431 (53.60%), Query Frame = 1
Query: 160 VFCGTVA-RAIGWKDCSMLPTDQWRQAAEPTLARIMREEYSRRYTCPNQAASLMATDYFFDSACVAKRFS----------------------SAEVHSCLQGRRVVFLGDSLSNQQGDSLVGMLGWHPDWMPLGAPRNSKMANDKDGNRYATLLDCWHPGEEDEVRGVERCYDIYQRDFEPHPHEEEPAGNMPVLRGR--------------------ISAKGVDTPENAG--GHARRQRHGRHSKRRGLGEGGXXXXXXXXXXXXXXXX-----EISVHMRMSPFPSHSNWFGRNVVDYNGTRSGDVFVVNFGAHYRHTPEEDVRFKADIFSVLDEMGHFATETNATMVWREISPVHFPAENGSYDNLGA--NYDSHACCTGIPPESLERNTWVDEYLEASGLADKVKVLRIYNMSFPRGAAHHTCFLAP 1296
+F G V +A GWK+C + P D W+ A + T A MR EY RRYTC ++ +L +S A+R S S + CL+GRRV+FLGDSLSNQQGDSL+GMLGWHPDWM RN+K+ + DG RY TL+DCWHP + GVERCYD DF P P G+ P R + + D+ ++A G R +HGR + R +G EISVHMRM PS +W R V D+N TR+ D+FVVNFG HY PEED FK D+F +LDEM + AT+VWREI+P HFPA NGS+D + D A CTG PPE +RN WV+ YL +GL D++ +LRIY+MS PRGAAHHTC AP
Sbjct: 25 LFLGVVVGKASGWKECLVSPQDAWKAATDTTAALRMRYEYERRYTCRDEKGALQGPTP--NSLAHARRKSDDSPPLVLSCLDANSLKRLNKESTSMQVCLKGRRVIFLGDSLSNQQGDSLLGMLGWHPDWMTKENLRNAKVITE-DGKRYYTLVDCWHPS----ISGVERCYDYSTSDF-PGPTTFGQPGDGPSGEARKQSRKKVFRSTPSSTKRSTSLGGRKADSTKSASTEGDNSRNKHGRKLQPREWEDGQEAAEEAEAEGYGEEVEAVDENEISVHMRMLSKPSGEHWLTRAVSDFNETRASDIFVVNFGGHYHDFPEEDDSFKRDVFPILDEMAVLGEK--ATVVWREIAPTHFPAVNGSFDAFDCLESKDRKASCTGTPPEVFDRNVWVENYLRTNGLEDRIHLLRIYDMSVPRGAAHHTCHFAP 445
BLAST of mRNA_P-fluviatile_contig18.3101.1 vs. uniprot
Match: D7G6G2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G2_ECTSI) HSP 1 Score: 203 bits (517), Expect = 4.390e-55 Identity = 147/387 (37.98%), Postives = 188/387 (48.58%), Query Frame = 1
Query: 316 MATDYFFDSACVAKRFSSAEVHSCLQGRRVVFLGDSLSNQQGDSLVGMLGWHPDWMPLGAPRNSKMANDKDGNRYATLLDCWHPGEEDEVRGVERCYDIYQRDFEPHPHEEEPAGNMPVLRGRISAKGVDTPENAGGHARRQRHGRHSKRRGL--GEGGXXXXXXXXXXXXXXXXEI---------------------------------------------------------SVHMRMSPFPSHSNWFGRNVVDYNGTRSGDVFVVNFGAHYRHTPEEDVRFKADIFSVLDEMGHFATETNATMVWREISPVHFPAENGSYDN-LGANYDSHACCTGIPPESLERNTWVDEYLEASGLADKVKVLRIYNMSFPRGAAHHTCFLAP 1296
MA +Y+FDS C+AKRF P + + A +DG Y TL+DCWHP + G+ERCYD+Y+ DF + P P L G +S + GG+ H R +KRR L EGG XXXXXXXXXXXXX SVH+RM+ +W R + DYN TR+ DV VVNFGAHYR TPE + FK D+ S+LD+M ET AT+VWREI+P HFPAENG+Y+ + + + ACCTG P + L+RN WV++YL +GL+D+VK+LRIY+MS RGAAHHTC LAP
Sbjct: 1 MAANYYFDSPCLAKRFFY------------------------------------------PADVREAVREDGTSYFTLVDCWHPPG-GSITGIERCYDVYETDFPSEGNYRRPG--KPFLEGHVSTTKDRASASTGGN-----HDRRNKRRSLEGDEGGIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEXXXXXXXGGVKKGEKEGEEGETTKANQTTSVHVRMTSAADDQHWLRRALRDYNETRASDVVVVNFGAHYRSTPEGEESFKRDVSSILDDMAEIG-ET-ATVVWREIAPTHFPAENGTYEAFVELDLGNTACCTGTPVKVLDRNAWVEDYLRENGLSDRVKLLRIYDMSVSRGAAHHTCHLAP 335
BLAST of mRNA_P-fluviatile_contig18.3101.1 vs. uniprot
Match: D8LML8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML8_ECTSI) HSP 1 Score: 173 bits (439), Expect = 1.840e-46 Identity = 83/148 (56.08%), Postives = 107/148 (72.30%), Query Frame = 1
Query: 856 MSPFPSHSNWFGRNVVDYNGTRSGDVFVVNFGAHYRHTPEEDVRFKADIFSVLDEMGHFATETNATMVWREISPVHFPAENGSYDN-LGANYDSHACCTGIPPESLERNTWVDEYLEASGLADKVKVLRIYNMSFPRGAAHHTCFLAP 1296
M+ +W R + DYN TR+ DV VVNFGAHYR TPE + FK D+ S+LD+M ET AT+VWREI+P HFPAENG+Y+ + + + ACCTG P + L+RN WV++YL +GL+D+VK+LRIY+MS PRGAAHHTC LAP
Sbjct: 1 MTSAADDQHWLRRALRDYNETRASDVVVVNFGAHYRSTPEGEESFKRDVSSILDDMAEIG-ET-ATVVWREIAPTHFPAENGTYEAFVELDLGNTACCTGTPVKFLDRNAWVEDYLRENGLSDRVKLLRIYDMSVPRGAAHHTCHLAP 146
BLAST of mRNA_P-fluviatile_contig18.3101.1 vs. uniprot
Match: D7FKZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ2_ECTSI) HSP 1 Score: 164 bits (414), Expect = 6.770e-43 Identity = 78/152 (51.32%), Postives = 100/152 (65.79%), Query Frame = 1
Query: 850 MRMSPFPSHSNWFGRNVVDYNGTRSGDVFVVNFGAHYRHTPEEDVRFKADIFSVLDEMGHFATETNATMVWREISPVHFPAENGSYDNLGANYDSHAC---CTGIPPESLERNTWVDEYLEASGLADKVKVLRIYNMSFPRGAAHHTCFLAP 1296
MRM P +W + D+N TR+ DVFVVNFG HY PE+D FK D+ VL +M NAT++WREI+P HFPA NGSYD+ A+ D+ CTG PP+ +RN WV+ Y+ +GL D++K+LRIY+MS PRGAAHHTC AP
Sbjct: 1 MRMLSRPRGEHWLLKAASDFNETRASDVFVVNFGGHYHDIPEDDEEFKTDMIPVLQDMAVLGQ--NATVIWREIAPTHFPAANGSYDSY-ADLDAKDLTPRCTGTPPKVFDRNEWVENYVRDNGLEDRIKLLRIYDMSVPRGAAHHTCHFAP 149
BLAST of mRNA_P-fluviatile_contig18.3101.1 vs. uniprot
Match: D7FKZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ3_ECTSI) HSP 1 Score: 149 bits (375), Expect = 1.240e-37 Identity = 75/131 (57.25%), Postives = 89/131 (67.94%), Query Frame = 1
Query: 130 DGALGSLVLTVFCGTVARAIGWKDCSMLPTDQWRQAAE--PTLARIMREEYSRRYTCPNQAASLMATDYFFDSACVAKRFS-SAEVHSCLQGRRVVFLGDSLSNQQGDSLVGMLGWHPDWMPLGAPRNSKM 513
G L V V +A GWK+CS+ P D+W A T A MR +Y RRYTC ++ AS +A YFFDS C A+RF +V SCL+GRRV+FLGDSLSNQQGDSL+GMLGWHPDWM GAPRNSK+
Sbjct: 36 SGLLVPFVFWFLGVVVGKASGWKECSVSPEDRWSPAPSRTSTAALRMRFDYERRYTCDSKHASYLAASYFFDSPCTARRFPFPPDVTSCLKGRRVIFLGDSLSNQQGDSLMGMLGWHPDWMTKGAPRNSKV 166 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3101.1 >prot_P-fluviatile_contig18.3101.1 ID=prot_P-fluviatile_contig18.3101.1|Name=mRNA_P-fluviatile_contig18.3101.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=492bp MKAFQKRKGSLVQWAKGDGALGSLVLTVFCGTVARAIGWKDCSMLPTDQWback to top mRNA from alignment at P-fluviatile_contig18:73507..84630+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig18.3101.1 ID=mRNA_P-fluviatile_contig18.3101.1|Name=mRNA_P-fluviatile_contig18.3101.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11124bp|location=Sequence derived from alignment at P-fluviatile_contig18:73507..84630+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig18:73507..84630+ >mRNA_P-fluviatile_contig18.3101.1 ID=mRNA_P-fluviatile_contig18.3101.1|Name=mRNA_P-fluviatile_contig18.3101.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2952bp|location=Sequence derived from alignment at P-fluviatile_contig18:73507..84630+ (Porterinema fluviatile SAG_2381)back to top |