mRNA_P-fluviatile_contig17.3023.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig17.3023.1 vs. uniprot
Match: A0A6H5JTS4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTS4_9PHAE) HSP 1 Score: 217 bits (552), Expect = 1.890e-56 Identity = 105/155 (67.74%), Postives = 124/155 (80.00%), Query Frame = 1
Query: 352 AEEQTPDQKSVAQATIAWMDTVTLGADDTPRKTADLYASDGVLWGTEVCAPDDEQWGTVSEEVRDTPEQIYSYYDYFARLPKLRLVEYTPAPVRVRGDFAAQAGSHMFAWQGADGTTVEMRARFSFTFRRDHPERPNPWMIVEHYSSSMPTVPAE 816
AEE+T +SV++ T+AW +TVT G D P++TA+LYA D +LWGTEVC TVSE VRDTPEQIY+Y+DYFARLP+L++VEYTPAPVRV GDFAAQAGS+ F+WQG DG+TVEMRARFSFTFRR P P PW IVEH+SSSMPT P E
Sbjct: 205 AEEET---RSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLE 356
BLAST of mRNA_P-fluviatile_contig17.3023.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI) HSP 1 Score: 214 bits (544), Expect = 4.550e-56 Identity = 106/151 (70.20%), Postives = 116/151 (76.82%), Query Frame = 1
Query: 364 TPDQKSVAQATIAWMDTVTLGADDTPRKTADLYASDGVLWGTEVCAPDDEQWGTVSEEVRDTPEQIYSYYDYFARLPKLRLVEYTPAPVRVRGDFAAQAGSHMFAWQGADGTTVEMRARFSFTFRRDHPERPNPWMIVEHYSSSMPTVPAE 816
TPDQK+VA TI W DTVTLG DD P+KTA LYA+D VLWGT VSEEVR+TPEQIY Y+D+FARLPKLRLVEYTPAPVRV G FA +AG++ FAWQG DG TVE RARFSFTFRRD P P PW IVEH+SSSMP PAE
Sbjct: 285 TPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGT------------VSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAE 423
BLAST of mRNA_P-fluviatile_contig17.3023.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE) HSP 1 Score: 210 bits (535), Expect = 4.560e-56 Identity = 104/151 (68.87%), Postives = 115/151 (76.16%), Query Frame = 1
Query: 364 TPDQKSVAQATIAWMDTVTLGADDTPRKTADLYASDGVLWGTEVCAPDDEQWGTVSEEVRDTPEQIYSYYDYFARLPKLRLVEYTPAPVRVRGDFAAQAGSHMFAWQGADGTTVEMRARFSFTFRRDHPERPNPWMIVEHYSSSMPTVPAE 816
TPDQK+VA TI W DTVTLG DD P+KTA LYA D VLWGT VSEEVR+TPEQIY Y+D+FARLPKLR+VEYTPAPVRV G+FA +AG++ FAWQG DG TVE RARFSFTFRR P P PW IVEH+SSSMP PAE
Sbjct: 291 TPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGT------------VSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRRGKPGSPQPWTIVEHHSSSMPIAPAE 429
BLAST of mRNA_P-fluviatile_contig17.3023.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE) HSP 1 Score: 209 bits (533), Expect = 2.610e-55 Identity = 105/152 (69.08%), Postives = 115/152 (75.66%), Query Frame = 1
Query: 358 EQTPDQKSVAQATIAWMDTVTLGADDTPRKTADLYASDGVLWGTEVCAPDDEQWGTVSEEVRDTPEQIYSYYDYFARLPKLRLVEYTPAPVRVRGDFAAQAGSHMFAWQGADGTTVEMRARFSFTFRRDHPERPNPWMIVEHYSSSMPTVPA 813
E TPDQK+VA + W DTVT+G DDTPRKTADLYA D LWGT VSEEVRDTPEQIY+Y+DYFARLP LRLVEYTP VRV GDFA QAG++ F+WQ DGTTVE RARFSFTFRRD P +P W IVEH+SSSMPT PA
Sbjct: 182 ETTPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGT------------VSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGTTVEKRARFSFTFRRD-PSKPQQWAIVEHHSSSMPTAPA 320
BLAST of mRNA_P-fluviatile_contig17.3023.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE) HSP 1 Score: 211 bits (537), Expect = 5.690e-55 Identity = 104/151 (68.87%), Postives = 116/151 (76.82%), Query Frame = 1
Query: 364 TPDQKSVAQATIAWMDTVTLGADDTPRKTADLYASDGVLWGTEVCAPDDEQWGTVSEEVRDTPEQIYSYYDYFARLPKLRLVEYTPAPVRVRGDFAAQAGSHMFAWQGADGTTVEMRARFSFTFRRDHPERPNPWMIVEHYSSSMPTVPAE 816
TPDQK+VA+ TI W DTVTLG DD P+KTA LYA D VLWGT VSEEVR+TPEQIY Y+D+FARLPKLRL+EYTPAPVRV G+FA QAG++ FAW+G DG TVE RARFSFTFRR P P PW IVEH+SSSMP PAE
Sbjct: 320 TPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGT------------VSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAE 458
BLAST of mRNA_P-fluviatile_contig17.3023.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI) HSP 1 Score: 207 bits (527), Expect = 2.910e-53 Identity = 104/152 (68.42%), Postives = 114/152 (75.00%), Query Frame = 1
Query: 358 EQTPDQKSVAQATIAWMDTVTLGADDTPRKTADLYASDGVLWGTEVCAPDDEQWGTVSEEVRDTPEQIYSYYDYFARLPKLRLVEYTPAPVRVRGDFAAQAGSHMFAWQGADGTTVEMRARFSFTFRRDHPERPNPWMIVEHYSSSMPTVPA 813
E TPDQK+VA + W DTVT+G DDTPRKTADLYA D LWGT VSEEVRDTPEQIY+Y+DYFARLP LRLVEYTP VRV GDFA QAG++ F+WQ DG TVE RARFSFTFRRD P +P W IVEH+SSSMPT PA
Sbjct: 327 ETTPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGT------------VSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGDTVEKRARFSFTFRRD-PNKPQQWAIVEHHSSSMPTAPA 465
BLAST of mRNA_P-fluviatile_contig17.3023.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI) HSP 1 Score: 206 bits (524), Expect = 2.950e-53 Identity = 102/148 (68.92%), Postives = 113/148 (76.35%), Query Frame = 1
Query: 370 DQKSVAQATIAWMDTVTLGADDTPRKTADLYASDGVLWGTEVCAPDDEQWGTVSEEVRDTPEQIYSYYDYFARLPKLRLVEYTPAPVRVRGDFAAQAGSHMFAWQGADGTTVEMRARFSFTFRRDHPERPNPWMIVEHYSSSMPTVPA 813
D+ +VA T+ W DTVT G D P+KTA LYA DGVLWGT VSEEVRDTPEQIY+Y+DYFARLP+LRLVEYTP VRV GDFA QAG++ FA+QGADG TVE RARFSFTFRRDHPE P PW IVEH+SSSMP PA
Sbjct: 133 DKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGT------------VSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPA 268
BLAST of mRNA_P-fluviatile_contig17.3023.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE) HSP 1 Score: 211 bits (538), Expect = 1.190e-52 Identity = 102/149 (68.46%), Postives = 115/149 (77.18%), Query Frame = 1
Query: 364 TPDQKSVAQATIAWMDTVTLGADDTPRKTADLYASDGVLWGTEVCAPDDEQWGTVSEEVRDTPEQIYSYYDYFARLPKLRLVEYTPAPVRVRGDFAAQAGSHMFAWQGADGTTVEMRARFSFTFRRDHPERPNPWMIVEHYSSSMPTVP 810
TPD K+V++ TI W +TVTLG +D P+KTA LYA D VLWGT VSEEVR+TPEQIY Y+D+FARLPKLRLVEYTPAP RV G FA QAG++ FAWQG DG TVE RARFSFTFRRDHPE P PW IVEH+SSSMP+ P
Sbjct: 1415 TPDMKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGT------------VSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAP 1551
BLAST of mRNA_P-fluviatile_contig17.3023.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.710e-49 Identity = 94/147 (63.95%), Postives = 104/147 (70.75%), Query Frame = 1
Query: 370 DQKSVAQATIAWMDTVTLGADDTPRKTADLYASDGVLWGTEVCAPDDEQWGTVSEEVRDTPEQIYSYYDYFARLPKLRLVEYTPAPVRVRGDFAAQAGSHMFAWQGADGTTVEMRARFSFTFRRDHPERPNPWMIVEHYSSSMPTVP 810
D+K V Q TI W + VTLG D PRKTADLYA DGVLWGT VSEEVRDTPE+IY Y+DYFARLP LRL E+TP +RV GDFA +AG++ F WQG DG E RARFSFTFR D PE P W IVEH+SSSMPT P
Sbjct: 103 DRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGT------------VSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSD-PESPTSWTIVEHHSSSMPTSP 236
BLAST of mRNA_P-fluviatile_contig17.3023.1 vs. uniprot
Match: D7FYA8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA8_ECTSI) HSP 1 Score: 187 bits (475), Expect = 2.610e-47 Identity = 97/151 (64.24%), Postives = 110/151 (72.85%), Query Frame = 1
Query: 370 DQKSVAQATIAWMDTVTLGADDTPRKTADLYASDGVLWGTEVCAPDDEQWGTVSEEVRDTPEQIYSYYDYFARLPKLRLVEYTPAPVRVRGDFAAQAGSHMFAWQGADGT---TVEMRARFSFTFRRDHPE--RPNPWMIVEHYSSSMPTV 807
DQ +V T W DTVTLG D PRK ADLYA DGVLWGTE A DD W SE VR+TPEQIY+YYDYFARLP+LRLVE+T AP RVRGDFA+Q+G+H F+W+GA G TVE+RARFS TFRRD P+ W IVEH + SMPT
Sbjct: 206 DQHAVELTTKLWADTVTLGTFDAPRKAADLYAPDGVLWGTEAFAFDDPLWEYASELVRNTPEQIYAYYDYFARLPELRLVEFTAAPARVRGDFASQSGTHTFSWRGAGGQEEYTVEVRARFSLTFRRDRCSCGGPSEWAIVEHCTFSMPTA 356 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig17.3023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig17.3023.1 >prot_P-fluviatile_contig17.3023.1 ID=prot_P-fluviatile_contig17.3023.1|Name=mRNA_P-fluviatile_contig17.3023.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=487bp MMTWTPSPADDAPNPAGISSLRKLFGFSLSKNVKSKGQEGSPRRQQQQQRback to top mRNA from alignment at P-fluviatile_contig17:1658211..1664542- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig17.3023.1 ID=mRNA_P-fluviatile_contig17.3023.1|Name=mRNA_P-fluviatile_contig17.3023.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6332bp|location=Sequence derived from alignment at P-fluviatile_contig17:1658211..1664542- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig17:1658211..1664542- >mRNA_P-fluviatile_contig17.3023.1 ID=mRNA_P-fluviatile_contig17.3023.1|Name=mRNA_P-fluviatile_contig17.3023.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2922bp|location=Sequence derived from alignment at P-fluviatile_contig17:1658211..1664542- (Porterinema fluviatile SAG_2381)back to top |