mRNA_P-fluviatile_contig17.3005.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig17.3005.1
Unique NamemRNA_P-fluviatile_contig17.3005.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig17.3005.1 vs. uniprot
Match: D8LNI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI0_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 2.700e-63
Identity = 144/235 (61.28%), Postives = 167/235 (71.06%), Query Frame = 2 
Query:   74 PLPQEEMDTYVMMGGVMQMRCRLCRTRLGRAGCTTGSCFDCCFKSARPCSAHAKQLERKRLEDELLAAGPSQSQLREEQRNIKGIFKEDAFHAIGDTATVWCFMDFLCAKSNQAAFTALSRSKRATAGRTALRTARRVSGAGCRGAASEGEAGRLGGDAPPPAMTTLXXXXXXAGDAA----GTAKLR-RVRPAVARWRRKNTQMLAALGEAVHS*TFAFPRCGGRKKSLLLSVS 763
            P PQEE+ TYV +GGVMQ+RC++C+TRLGRAGCTTGSC DCCFKSA PC AHAKQL+RKRLE+ELL+AGPSQSQ+RE+QRNIK IFKE++FHAIGDTATVWCF+DFLCAKSNQAAFT+LSR++RATAGR A R+ RR S                            XXXXXXAGD      G A+ R RVRPAVARW+RKN +ML AL E            GG   SL ++ S
Sbjct:  363 PQPQEELPTYVRIGGVMQVRCKICKTRLGRAGCTTGSCLDCCFKSALPCGAHAKQLQRKRLEEELLSAGPSQSQIREKQRNIKDIFKEESFHAIGDTATVWCFLDFLCAKSNQAAFTSLSRTQRATAGRDAPRS-RRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDPESAVDGKARRRPRVRPAVARWQRKNAEMLTALREGE----------GGGSSSLAVATS 586
[Close]
BLAST of mRNA_P-fluviatile_contig17.3005.1 vs. uniprot
Match: A0A6H5JZT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT8_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 5.340e-43
Identity = 130/251 (51.79%), Postives = 153/251 (60.96%), Query Frame = 2 
Query:   47 ATVLVDAPAPLP-QEEMDTYVMMGGVMQMRCRLCRTRLGRAGCTTGSCFDCCFKSARPCSAHAKQLERKRLEDELLAAGPSQSQLREEQRNIKGIFKEDAFHAIGDTATVWCFMDFLCAKSNQAAFTALSRSKRATAGRTALRTARRVSGAGCRGAASEGEAGRLGGDAPPPAMTTLXXXXXXAGD----------AAGTAKLR-RVRPAVARWRRKNTQMLAALGEAVHS*TFAFPRCGGRKKSLLLSVS 763
            A V  +AP P   QEE+ TYV +GG                GCTTGSC DCCFKSA PC+AHAKQL+RKRLE+ELL+A PSQSQ+RE+QRNIK  FKE++FHAIGDT TVWCF+DF+ AKSNQAAFT+LSR++RATAGR A R+ RR S                  DA PP     XXXXXX               G A++R RVR AVARW+RKN +ML AL E            GG   SL ++ S
Sbjct:  771 AVVATEAPTPPQRQEELRTYVRIGG----------------GCTTGSCLDCCFKSALPCAAHAKQLQRKRLEEELLSAKPSQSQIREKQRNIKDTFKEESFHAIGDTVTVWCFLDFVRAKSNQAAFTSLSRTQRATAGRDASRS-RRASXXXX-----XXXXXXXXDDALPPXXXXXXXXXXXXXXXXXXXDPESAVGGKARVRVRVRQAVARWQRKNAEMLTALREGE----------GGGSSSLAVATS 989
[Close]
BLAST of mRNA_P-fluviatile_contig17.3005.1 vs. uniprot
Match: D8LL83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL83_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.440e-16
Identity = 57/137 (41.61%), Postives = 70/137 (51.09%), Query Frame = 2 
Query:  131 RCRLCRTRLGRAGCTTGSCFDCCFKSARPCSAHAKQLERKRLEDELLAA-------------------------GPSQSQLREEQRNIKGIFKEDAFHAIGDTATVWCFMDFLCAKSNQAAFTALSRSKRATAGRTA 466
            RC LC  R  + GC++ SCF+CC KS +PC AHAKQ+ERK  EDELL                           G          R   G FKE AF A G+TAT+WC  DF+C K  Q A   L+R++R  AGR+A
Sbjct:  374 RCGLCG-RKAKLGCSSESCFECCLKSGKPCEAHAKQVERKHREDELLLGRXXXXXXXXXXXXGSCGLMSPGLPGGAFDDGAAPRARLPPGAFKEAAFQATGETATLWCLKDFVCGKDTQTAMETLNRTERQKAGRSA 509
[Close]
BLAST of mRNA_P-fluviatile_contig17.3005.1 vs. uniprot
Match: A0A6H5JLF6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLF6_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.650e-12
Identity = 53/137 (38.69%), Postives = 68/137 (49.64%), Query Frame = 2 
Query:  131 RCRLC--RTRLGR----AGCTTGSCFDCCFKSARPCSAHAKQLERKRLEDELLAA---------------------------GPSQSQLREEQRNIKGIFKEDAFHAIGDTATVWCFMDFLCAKSNQAAFTALSRSK 442
            RC LC  +++LG+    AGC++ SCF+CC KS +PC AHAKQ+ERK  EDELL                             G          R   G FKE AF   G+TAT+WC  DF+C K  Q A   L+R++
Sbjct:  620 RCGLCGRKSKLGQLLEGAGCSSESCFECCLKSGKPCEAHAKQVERKHREDELLLGRXXXXXXXXXXXXXXXXGGLMSPGLPGGAFDDGTAPRARLPPGAFKEAAFQ--GETATLWCLKDFVCGKDTQTAMETLNRTE 754
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig17.3005.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LNI0_ECTSI2.700e-6361.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZT8_9PHAE5.340e-4351.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL83_ECTSI1.440e-1641.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLF6_9PHAE1.650e-1238.69Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig17contigP-fluviatile_contig17:1349519..1358306 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size3649
Cds size615
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815732.666883-UTR-P-fluviatile_contig17:1349518..13496091622815732.666883-UTR-P-fluviatile_contig17:1349518..1349609Porterinema fluviatile SAG_2381UTRP-fluviatile_contig17 1349519..1349609 +
1693563068.4489872-UTR-P-fluviatile_contig17:1349518..13496091693563068.4489872-UTR-P-fluviatile_contig17:1349518..1349609Porterinema fluviatile SAG_2381UTRP-fluviatile_contig17 1349519..1349609 +
1622815732.7403934-UTR-P-fluviatile_contig17:1355363..13583061622815732.7403934-UTR-P-fluviatile_contig17:1355363..1358306Porterinema fluviatile SAG_2381UTRP-fluviatile_contig17 1355364..1358306 +
1693563068.5199997-UTR-P-fluviatile_contig17:1355363..13583061693563068.5199997-UTR-P-fluviatile_contig17:1355363..1358306Porterinema fluviatile SAG_2381UTRP-fluviatile_contig17 1355364..1358306 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815732.681552-CDS-P-fluviatile_contig17:1349609..13496371622815732.681552-CDS-P-fluviatile_contig17:1349609..1349637Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 1349610..1349637 +
1693563068.459375-CDS-P-fluviatile_contig17:1349609..13496371693563068.459375-CDS-P-fluviatile_contig17:1349609..1349637Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 1349610..1349637 +
1622815732.6945446-CDS-P-fluviatile_contig17:1350264..13503121622815732.6945446-CDS-P-fluviatile_contig17:1350264..1350312Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 1350265..1350312 +
1693563068.4696565-CDS-P-fluviatile_contig17:1350264..13503121693563068.4696565-CDS-P-fluviatile_contig17:1350264..1350312Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 1350265..1350312 +
1622815732.7075071-CDS-P-fluviatile_contig17:1351201..13513841622815732.7075071-CDS-P-fluviatile_contig17:1351201..1351384Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 1351202..1351384 +
1693563068.4775844-CDS-P-fluviatile_contig17:1351201..13513841693563068.4775844-CDS-P-fluviatile_contig17:1351201..1351384Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 1351202..1351384 +
1622815732.7194543-CDS-P-fluviatile_contig17:1353414..13535061622815732.7194543-CDS-P-fluviatile_contig17:1353414..1353506Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 1353415..1353506 +
1693563068.4881444-CDS-P-fluviatile_contig17:1353414..13535061693563068.4881444-CDS-P-fluviatile_contig17:1353414..1353506Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 1353415..1353506 +
1622815732.7302632-CDS-P-fluviatile_contig17:1355099..13553631622815732.7302632-CDS-P-fluviatile_contig17:1355099..1355363Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 1355100..1355363 +
1693563068.5066576-CDS-P-fluviatile_contig17:1355099..13553631693563068.5066576-CDS-P-fluviatile_contig17:1355099..1355363Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 1355100..1355363 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig17.3005.1prot_P-fluviatile_contig17.3005.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig17 1349610..1355363 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig17.3005.1

>prot_P-fluviatile_contig17.3005.1 ID=prot_P-fluviatile_contig17.3005.1|Name=mRNA_P-fluviatile_contig17.3005.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=205bp
MDTYVMMGGVMQMRCRLCRTRLGRAGCTTGSCFDCCFKSARPCSAHAKQL
ERKRLEDELLAAGPSQSQLREEQRNIKGIFKEDAFHAIGDTATVWCFMDF
LCAKSNQAAFTALSRSKRATAGRTALRTARRVSGAGCRGAASEGEAGRLG
GDAPPPAMTTLSGGAAAAGDAAGTAKLRRVRPAVARWRRKNTQMLAALGE
AVHS*
back to top

mRNA from alignment at P-fluviatile_contig17:1349519..1358306+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig17.3005.1 ID=mRNA_P-fluviatile_contig17.3005.1|Name=mRNA_P-fluviatile_contig17.3005.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8788bp|location=Sequence derived from alignment at P-fluviatile_contig17:1349519..1358306+ (Porterinema fluviatile SAG_2381)
GGGTGCGGGTGGGAGTGCGGCGTTGGAAGCGGCGGAACCAGTGACAGCGA
CCGTGTTGGTCGACGCGCCAGCCCCTTTGCCGCAGGAGGAAATGGATACT
TACGTGATGATGGGAGGTGGTGAGTTTTGACAGCACGTGCTGCCAGAGTT
CCTTTAGGTCGATAATCGAGGCGGCATGAGGAGTCGGAGCCATTTCCTCC
AGTGTTTCTCCGCGTTGTGTCATAAATCAACGACGTTCGATTGGTTTTTC
GTATGTTCTCCTGCGATGTTGTGCTAAGCGGAATTGGCAGCGCCATTTTT
CCGCCTTCGTGTAGCAGCCAGGGGGGTCTTGCGCTTAGATGAAAACGTTG
GTATCTGGCACGCGTCTCGAAACCGTGAGGGCGGTATTTTTGTTTCAGGA
CCTGCACTACATCCACGCAATCCATGCGCAGCAGTGAACATGTATAGTCA
GTCTGTCCCCATACTTTTAAAAGTCGTATTGCGCCAATATTTGACAACCA
CGCGTGTCCAACTCGCTGGATTTCGTGCGACACTTGCCGAAGGCAAGCGC
CCCGTCCTCCACCTCTTTCCCCCTCTATTGCTTTCTTGCTTCGTCTGACT
TGCGGCGTGATGTTGCCCGTAAAGTTGTGTCTGTTTGTTTGGACGAGGGT
GACTGACTGATTTTTTCTTGCTCCCATCCCCTTCCTTGCTGTCATCGGGT
TGCTTATTTTGCCCCTCCCTCAACCTGCACTTTTGACGATGGGCAGTGAT
GCAGATGCGGTGCAGGCTGTGCAGGACGCGCCTCGGCCGAGCCGGTGAGT
TAATTTCTTGTGTGTTTATTTCTCGGGTCACTGTGCCTGGTTTTGCTCAG
TGTTTTTCCGGATCATCCCTCGAAGGTGCAACCCTTTGACTTTTGTTCGT
TCTATTGCCATTTTTGCGATGGTTTGGGCGGAAAACCGTAGCGCAGCGCT
AACTCTCGTCCTCCCACTTGCACCAATCACAAAAGCACGAGCAGTGATTT
GCCGCTCCAGCCGGGCCACTTTCTGCCACGTTGCCATTCTCTGTGCCCTC
TCTTGAGATGTTAGCGTTCATCCGTCCTGTGCCTCCGATTTTGACAGCAA
CATGCCTTCTCCCTTGTTTTTGCGTGAGGTTTGGTTTTCCTGGCGACTTC
CCCTCGAGGCAAAACACCCTCGTCTGTTGCTCGGCGTTGAAGGTGTTGCC
ATCGCTCGCCTCCCGCCTCTGGGCCCCCAATTAATTCCTGTTCGCGATTC
GATCCTCTTGCGTGCGATTGGTGCGGGCTCTCCCGCTTGTCGTCGTTGCG
CTGGTCGCAGGGTACCTCACTGAGTGGATAAGGTGGTGGATTGCTTATCG
ATCGCAGTTCGCTCTCCCTAGCGGTCCCTCTCCACTCCCTCGTTCAGCCC
CCGTGTCGCGCTTCACTCAACTCTGCACTTGTTTGCTGCACGCTGGCATT
TTTCTGGCTGTTTCTTTCTGCCTGTGCTCCTACCGCTATCGTCATTTTTG
CTGCTGCTGCCCATATGATTGCTGATACTGTTGCTGATACTTCTGATACG
GCCGCCGCTGCTGATGCCGCTGCGGCCAATCCTGCTTCTTGTGCTGTTGC
CGATTGCTGAATGCTGTTATTGTTGCTTCCGCTGTTGTTCTTGTTTTCGC
TGCTGCTGCGGCTGGGTTGTGGTGGTATCTCAGGCTGCACGACGGGGAGC
TGCTTCGACTGCTGCTTCAAGTCCGCGCGCCCCTGCTCCGCGCACGCCAA
GCAGCTCGAGCGCAAGCGGCTGGAGGACGAGCTGCTGGCCGCCGGGCCGA
GCCAGAGCCAGCTGAGGGAGGAGCAGCGTAACATCAAGGGCATCTTCAAA
GAGGACGCGTTCCACGGTGAGTATTCGGGGGGGGGGGGCGTACTCATGTT
TTGCATGCCTTAATTGTTAGACCACTGACCACGCGTCCTCGAGAGGACGG
AGCATCATTCCCGCAGGATCGATCACCGATGGCCAATCGTTCCTTCCTAC
TTTGCCAAAGGTGGCTCAAAAATGTTTTCCCTAACCTGTCTACTTTATAC
CTGTACTTCCTGGGCCACATCTTACACCCGAGTACCGCTACCGTCTTCTC
CTCTTTGTTCCATGCCTCAAACTTCTCTCTATACCGACTGTCTATTTTTT
CCAGCTCAACCATGTACCCTTCTCTCTCCTGATCGTATGACGGGCATTCC
GCAACTACATGTACCCGGTCTTCGCATTCGGCGCCGCAGTCACATTTGAA
CTTGTCTTTGTCGTCGTCTACCTTCCTAAACCTCCTTCTACGTTCCCGAA
GGTCAATATCGCCCGTTCTAAATTTGACCTTCATCTTTGTCCCTTCATCC
AATGGTCCGTTCAGGTACCCCTTGAAACCTATTCCTTCGTTCAGCCTCCC
GTACACTTCTAGAACCTCCTTTTCCTTGGTCTCTTTCCGCAAGCTGTGGT
CTTCTCTGTTTTCAAAGGCTTCTGAGATGCTCTTCTTTTACCCTTCTAAG
CTTTCCGCTCCCGTCGTCTCCCGTTCGTCAATATCTAACCCACTCCACAC
TCCCTGTACAACCTTAGCCCACTCAATGGGTTTTCTACCCTTGGCCTTGT
TTACCCATGTCGCCTCCCAAGCTATTCTCGGTAACCTCTCCTTTCCCATG
TTTTTCATACGGTATTGCCATGTCAACTTCCTTCTGTCTCTTCCCGTTCT
TAAGGAGTTAATCCCCAACTCTGCTCTTACTGCTGCGTTATTTGGTGAGT
ATTCAGGGGGGTGATTATTCAGGCAGGCAGGGAGAGGAGTCACCATACCA
CTTGCTGTTTTTTACTTCGGTTTATTTCCTGTCGCTTGTTATTCGATTCA
GGCAACTCGGGCATCCTCATTCCTAATTTTAGGGTCTCACGGTACCCCTT
CCCACACCCTCTCAAACGAATGAACCCCCGTCCTCAATCGCTTTCCTGGC
GCCCCTTCTCAACTTCCGGTGGCATGGTGCCCTTCAGAGACCTTCCGCAA
CGCGATTTCATTTCTGTTTGCTGCAAGCCCGACAAAGTCGGAGGGTATTA
TGGGGACGAGAAAACAAACGCCAGTGTTACGACGAAACGGGAGAAACGGG
CTGACCCAAAACGATGCCCAACCCTGTTTGACTTCCAACCGTGGAATGTG
TCCATCGGAGTTTGAGCATGGACACGCGCATGTGCGGGCGTTAATAGCTG
GCGCTTGTACGTCTGTTTGGGGGGCGTTCAATGGCCGAGGCCCTTCTTTT
GGTGTTCTCCATCGTGTCAAACAGATGATGGCGCATGCGTGCGCGCGTTT
ATGTGCTGGTGCTGCTTATTCGTTCAGGTCCTTGTCTTGATTCGCTTCAC
CACGCCAGCACGTCGTCGCGAGTGCAGTGAAGTCTCCATGAATCGCGGTG
TGGAAATGTGGTTTCCTGTGAGCACGTCGTCTTTGCTGCACTCTGCCGAG
CCTGGGGAAGGCTCGGGCTGGAATGATGGTTTCGGTGGCTCCTGCGAGGG
CCTTTTTTTTAGAAACGCGAATAAAGGCGAGGAAATCGAACCAAGCGGCA
ATCACGTTGCGGCGAACAAGAGGAACAATGGTTGGATAGGAAGTCGTGCT
TTCCTCCGTGCAGGACTGAAACTGGAGATGAGCCGACCGATTACGCCATC
CCACCCCTGTCCAGCTATTTGGTTTCCTGCCAATGATGTCACACCTTTTG
GATGACGGTCCTAGGAATAAAAGGGTGGTCAGATCACGCAAATCCACCCC
TGTCCAGCTATTTGCGTTCCTGCCAATGACGTCACACCTTTTGGATGACG
GTCGCAAGAATATAAGGGTGATCAAGCCGTTATCGTGGAAAGTTCGCCAT
TAACCTTCGCTCCGCCGTTTATTGTTTCGTGCGTTGCACGCCGCAGCTAT
TGGAGACACGGCAACGGTCTGGTGCTTCATGGATTTCCTTTGTGCTAAGT
CCAACCAGGCGGCGTTCACGGCTCTCTCTAGGAGTAAGGTGCGCAATTGA
CGAGGGCCCCCTCCTTCAGTGGGTCTTGGCCTTGTGTTTCCTCAGCATCG
TGTTGTGTTCTCGCTCGCCGAACGAACACGTGTTGTACAGTGCGAATCGA
CATCTGTTGTCGGGCAGCTACGTAAACGAACAGAAAAAGACTCCTCAAGA
AGTGTCGTGTGCAAGTCCCCGGCTGATTGCCCAGCAGATTGCTGAAAGAT
GTCGTACTATTTGCGGCCACAGAACATGGAACAACGGTAGAAACGACAAC
ACGAACAACAACAGCATCCACAGCCTTGCAGGTCGCACCGAAGAAGGCAG
CAGATCAACTCCTGTTTCCATGCAAAAATTGCGAACTACCCAAGGTCACA
TATGGCGTTCGATTGTGTTTTTAACGTGTTTATGAACGAATCATGACTGT
CGCCCACCCCCCCCCCCTCTCCCCCCTCGCCTGATGGCTCTCATCTCGGT
GTTTGCCATCGGGATTGGGTTTTCGTCGCGTGGCAACGACGTTGTAAAAC
AAGCCAATTCACTTCGTGAACTCGGCAACCAGGTTACCGTCTTTTTTTTT
TTTTTCCTCTGGTTTTTGGCGGTAACCATAATGGTGGTCGAGAAGATCAT
GTTGTGCGGGTGGAGAACCCTCACTCCGTGCAAGGGGGATGATCGCACCA
CGTTGTGTTAAAATGGTCAAGCACCCTCGAGGCAGTTACATAGTGCTTAC
AACTGTCTCTGGAAGTGAAAGCACCAGAAAATAAATTAAGCCATACGCAG
CTGTCATCCGTGTGCATGGAAGTAAGCACAAGATGCCGAACACCCTTAGC
AGGATGCAGCGCACCCTTCATGCGACTCGCCGAATACCTCACGGCGCTTC
GCGCTTGGTGGTGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTGCTCCGT
CCCGGCTTTGTAGGGATGCGAGGTCAATGGTCTAACGACTACGGCATGCA
CGACTATGAGTACACCCCCCCCCCCCGCTGGCTCTCACCTCGGTGTTTGC
CATCGGGATTGGGTTTTCGTCGCTTGGCAACGACGTTGTAAAACAAGCCA
ATTCACTTCGTGAACTCGGCAACCAGGTTACCGTCTTTTTTTTCCTCTGT
TTTTTTTTGCGGTAACCATAATGGTGGTCGAGAAGATCATGTTGCGCGGA
GTGGAGAATCCTCACTCCGCGCAAGGGGGCTGATCGCACCACGTTGTGTC
AAAATAGTCAAGGACCCTCGAGGCAGTTACACAGTGCTCACAACTGTCTG
TGGAAGTGAACGCACCAGAAAATAAATTAAGCCATACGCAGCTGTCATCC
GTATGCAGGGAAGTAAGCACGAGATGCCGAACACCCTTAGCAGGATGTAG
CGCACCCTTCATGCGCCTCGCCGAATACCTCACGGCGCTTCGCGCTTGGT
GGTGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTGCTCCGTCCCGGCTTT
GCAGAGATGCGAGGTCAATGGTCTAACGACTACGGCATGCACGACTATGA
GTACACCCCCCCCCCCGTCTCCCCTCCCTGGCCCCCTCCCTATTCGCGCT
TGATTTGCGGCTATCGCGTCCCCTTTGTCAGCGAGCTACGGCGGGCCGCA
CAGCCCTACGCACGGCCAGGAGGGTTTCCGGAGCAGGATGCAGGGGTGCG
GCGAGCGAGGGCGAGGCGGGTAGATTGGGCGGCGATGCGCCTCCGCCCGC
GATGACGACGCTTTCCGGCGGGGCCGCCGCCGCCGGAGATGCCGCCGGCA
CGGCGAAGTTGCGTCGCGTGCGCCCGGCGGTAGCGCGGTGGCGGCGCAAG
AACACGCAGATGCTCGCCGCCCTCGGCGAGGCGGTCCACTCCTAGACCTT
TGCCTTCCCGCGCTGCGGGGGACGCAAGAAGTCTCTCCTTCTCTCGGTTA
GTACGTGTCATCCTTGTGTACCAATACATCCACATCTACAACAAAAGCGG
ATCCGTACATCAGTGCGTCGATCAGACCGCCACCTGCTTTTTTTCGTCCG
GTTTTGACTGGGGCAATATTTTGGTGCCGACCTGCTGTTTTAAATCCGGG
GTTTGACTGGTGCGCGGGCGGAGGAGGGCAGGGCAGGGCAGGGCAGGGCG
CGGTGTGACAAGACAGCAGACCGGGCCACTTGGCATGGTTCGTCAAAGGC
GAACGCTCAAGCGGGCCGCTGCGAGGGGTAAGACAGGCAAAGTGAAGAGG
TGACGACGAAACGGTGGGAGGGTATTGCGAGAACGCAATGGGCAACGCAA
TGGGCGCCGGGGCGGAAGCGATGTTATGTCCTTGGATGGAAGCGAAATGA
TGTCTGTGCGGGGGGGGGGTTGGCTGAGGGCAGGTATCAAAGTGTGCTGG
AAACTGGAGAAGTCGCGAATCGTGTGAGGTGCGATTTTTTTCTTGGGGAC
GCACCCTTACCGAGGCCGTTCGTTGTTTCATCAGTTGTTTTCACTTCGTT
TATTTTTTTGGTACGGCGCAGCGTGTCTTCGCTCTCGAGACTCGAACGAA
ATGCAGACGACGCGAACATTCTGTCCCTCGAGTTCCTTTCGCTACACCCC
GGATTCGTGCTTGCGGAGGTTTGCTGTAGCTCGGGAGAGGAATGTGGCAG
CCTTTGATCAGTTCCTCGGAAACGTTGGACGAAGGAGGACCGGGGTATGG
GGAAGGGTGAGACGGGGTTGGGGCGAAGGTGTGAATTAAGCGTGCACTAA
TCGTTTTCGGGCTTGTATTTTCCACGCTTCGATTTCCTGACGATGGAGAC
GTTCGTCTCGCCAAGTGATAAGTGAAATTATTTTAGTTGTTGTTTGGTGG
TGTTGTTGGTGCCCCGCAAGCTGTCTCACGCGGCTTGCGGCGGGATCTGG
CCGCCGGTAGCGCTCATGGAGCTACAACCGTCTCTCTCGCGACGTAGCAG
TTTTCTTGCACTCAGCGCCTCTCCCCTCGTCCGCCCACCCGCCCACCTAT
CCTACACAAACGGTGTACCCATTATTTTGCTGTATTGCGCGACGACATGG
CGATGTGCACCGGTTTGGACGCCATGCAACCCTTGACGTGTAGAGGAGGG
GAGCGGAGGGCGGCATTCGATCTATGTGCAAGTTGGTCGATTATTTAACC
CCGGTACGGCAGAAACAACGGTTTTCGCGTTGGTCGTTCAGAAGCGGCCA
ACGAGAGAGGCGCGCACTCTCCCCGTCTCCATTTCTTCCGAGTGGCGCGC
TCGCTTCTTTTACTGCTTCTTGTCCTCGTGTTCTTGACCTTTTTGCCCTT
TGCCTTCAGCGGGCGGCGACGTCTCGTTCCCTTGCGCGCTGGGCGGGGGC
AATGGCGGAAGGGGTGCCAGCGCGATGGTGTTCTTCTCGCCGTCCGGCGT
GACTTCCTGGCTTTTCAGGCAACGGGGGGGGAGGGGCCGGTGCCAAATGT
GGCGGTGGCCCTTGCATCGTCTGAAGAATGCTTGCTTTGGTTTGTGTTTC
ATCTTGCGCAGTCGACGTTATTGGGAATAATGAAACCTTTACAGCATGAT
AGCTTGAAGCCTTGCCGAAATTCTCGAGGCTGCATCATTCCACACGCGAA
AGGATTGCTATTCTCATGTTCGGCAATGACACCGGAGAGGCAACATGTTG
ACAAAAAAAAACGCACGGAAACAACAGCAATGATGAGACCATACGCCGAG
TGGAGTTTGTTATGGACAAATATTTCCTTCATGTTGGCCTCAGCGGGGCA
GGAGGTACACGAGGAGGGTGTACGGGGATTATCATTCTTCGAAGATCACA
AGTGTGTGCCCTGTTGAAAGCTGAAACTAACTGCGTTCCGGGCGTGGCTC
TTGCTTCTTGTTGTTTCCGTCGTCGTTTCTTCACATTATTGTGGCGGCTC
TAGTTGTGGTGTGTTGGTTGCTCTGTGGAGGAGCCCCGAGGCATAAATTC
GTGCCTGTACTTTGTTTCAGAAGGTAGACGGGCCGTCTCACAACGATTTG
CTGTGTTTCTTCAGGGACTCGAGCCTTGCTATTTTTTCGAGTAGCATATT
GTACAACGTTTGATGGGGTAGAAACCAAACAAACACGTTTCCGTGCTTGG
GCGATTCGTCGTGCTTTCGGATAAGGGCTGTTCTGTCGTGAAGGAACGCC
AAGAGGAAAGAGGGCGAACGGCACGCGGTACCCCTCGAGAAATAGTTGAA
GAGCTGCAGCTGTATGTACTGTCTGTACTTTGAACAGAGTACCATGAACT
CCGAAATACTCAGCAATCCATGTGTTGCACGCTCGCTACTTGTTGGGAAG
TAAATCAGGATGCACAGAGATATTTCTCATGTCGCTTAGTATCATCCGCG
TGTGTGCTTATTCCGTGTTGGTGAGACGGTGTTGTTGAGACGGTGGTGGT
TGTGCACGTACGTGTGTGCGGACACGAGGGTGCGGGGAGGCCCGGCGCGT
ATTTTGGACCTTACGGTACTGCTTTCAAGCATGTGTCATGTGCACATAAT
CGCATTGCGTATTCGATTGCGGCATACGGCAGCTACATTCCTCGCTGCCG
CGGAATTTGTCGTGACCGCTCTCTCGGATTGTGTCATGTCGAACGTATTT
TAAACAAGAGTCTTGACTGTGCTCTTCGCACGTTCAGTTGTTTTAGTAGT
GTAGACCTAATTAATCTACCTGCATTTATTTCTTCTGTCGGCCGCGGTGT
CAGTTACCGGCGGAATGGGGGGAGACGATTAAATACGATGTGGAGGGGTA
TATCCGGTAACCACTTTCGATTGAGAGTAGGGGAAACGTAAAGGTGATTG
AAGTGCACAAAGTTTCGTGCTGAGCGAATTTATCCGCC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig17:1349519..1358306+

>mRNA_P-fluviatile_contig17.3005.1 ID=mRNA_P-fluviatile_contig17.3005.1|Name=mRNA_P-fluviatile_contig17.3005.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1230bp|location=Sequence derived from alignment at P-fluviatile_contig17:1349519..1358306+ (Porterinema fluviatile SAG_2381)
ATGGATACTTACGTGATGATGGGAGGTGATGGATACTTACGTGATGATGG
GAGGTGTGATGCAGATGCGGTGCAGGCTGTGCAGGACGCGCCTCGGCCGA
GCCGTGATGCAGATGCGGTGCAGGCTGTGCAGGACGCGCCTCGGCCGAGC
CGGCTGCACGACGGGGAGCTGCTTCGACTGCTGCTTCAAGTCCGCGCGCC
CCTGCTCCGCGCACGCCAAGCAGCTCGAGCGCAAGCGGCTGGAGGACGAG
CTGCTGGCCGCCGGGCCGAGCCAGAGCCAGCTGAGGGAGGAGCAGCGTAA
CATCAAGGGCATCTTCAAAGAGGACGCGTTCCACGGCTGCACGACGGGGA
GCTGCTTCGACTGCTGCTTCAAGTCCGCGCGCCCCTGCTCCGCGCACGCC
AAGCAGCTCGAGCGCAAGCGGCTGGAGGACGAGCTGCTGGCCGCCGGGCC
GAGCCAGAGCCAGCTGAGGGAGGAGCAGCGTAACATCAAGGGCATCTTCA
AAGAGGACGCGTTCCACGCTATTGGAGACACGGCAACGGTCTGGTGCTTC
ATGGATTTCCTTTGTGCTAAGTCCAACCAGGCGGCGTTCACGGCTCTCTC
TAGGAGTAAGCTATTGGAGACACGGCAACGGTCTGGTGCTTCATGGATTT
CCTTTGTGCTAAGTCCAACCAGGCGGCGTTCACGGCTCTCTCTAGGAGTA
AGCGAGCTACGGCGGGCCGCACAGCCCTACGCACGGCCAGGAGGGTTTCC
GGAGCAGGATGCAGGGGTGCGGCGAGCGAGGGCGAGGCGGGTAGATTGGG
CGGCGATGCGCCTCCGCCCGCGATGACGACGCTTTCCGGCGGGGCCGCCG
CCGCCGGAGATGCCGCCGGCACGGCGAAGTTGCGTCGCGTGCGCCCGGCG
GTAGCGCGGTGGCGGCGCAAGAACACGCAGATGCTCGCCGCCCTCGGCGA
GGCGGTCCACTCCTAGCGAGCTACGGCGGGCCGCACAGCCCTACGCACGG
CCAGGAGGGTTTCCGGAGCAGGATGCAGGGGTGCGGCGAGCGAGGGCGAG
GCGGGTAGATTGGGCGGCGATGCGCCTCCGCCCGCGATGACGACGCTTTC
CGGCGGGGCCGCCGCCGCCGGAGATGCCGCCGGCACGGCGAAGTTGCGTC
GCGTGCGCCCGGCGGTAGCGCGGTGGCGGCGCAAGAACACGCAGATGCTC
GCCGCCCTCGGCGAGGCGGTCCACTCCTAG
back to top