mRNA_P-fluviatile_contig17.2918.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig17.2918.1 vs. uniprot
Match: A0A6H5KZY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY8_9PHAE) HSP 1 Score: 831 bits (2146), Expect = 5.320e-279 Identity = 602/1166 (51.63%), Postives = 699/1166 (59.95%), Query Frame = 3
Query: 6 MGNSAGKQSDENLREAVQMVLRVPMIGPAAAXXXXXXXXXXDAGGDGSVEQARAVEEAKEEAVAVAEELEEEVWMGFFGCAMGEEEFFEAFSASDATAMSVLQPGNLKLIAREALSNISRFMEARQTSPPMATVQASVRVLTRVFPALLADPALRAWCWARRPLPRVLSYLEQPEEEDPPD-----RNXXXXXXXXREQQPIARRGRFP--------------------PLESDD---ESGEGGGRRKPTXXXXXXXXXXRARSRALSGSDGGEGEEKGSSGDDAXXXXXXXXXXXXXXXXXXXXXDDFSVCFASVALHVAINLLCFPGFCVDGECSDWDDYYTPIPELHYGIREASIIWAPGIAVTENNMKQVNSLNSNRVEALRLLAALLSLPLFLETPTV-------------------------------------------------LFYSLINLAVV------GRARGGVSGGGAEGKGWIEWLGLGGG---GXXXTRAGPEGGPQSLTEWSLQMLALLLRHGRPYGELLKERGVDLAATGTLPVFGAIPRTVELSAEKAKGYNCFRRCVFVLHSDDDLGSIALGLLRHMDDVRLGKTRPHGSALSIHQEALMIFSSFVHENPLFVPRLAASEELTRGTAVCVCHFLETAVSSTIEYAEQRLRQEDVQQXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDGGGRPGSEENVRRHHMGEEIGQLVLLGRVLLALSENESFMAALAEMPAVSRTRVRRGAGFSAPALEDVPGTTMLEVVLSLSAWSLARAGRGATVAAPALAAVARNACPFAKSGMMKETAEWLLDALEMYLAEGGDDDNAQRARGSSDGAEGTRGGGVSSS----WAVASLLLEGLAAAAVSNHEQQRDLMMAMVDRSRENDAI---------NSHGNHELRYDARAPRVDGGDGGGGVFRWLAARGGMLEGGDSGXSGNGKGNGQSDTGGFRFGGGNWRGRTPATALVDEAGNAQSTLASEHYWFEASVATVPWEGWAMRQVLWPLLSLLVAPLPGAEAEAGAAAASMCAGESQEEVRAKAVHEFAAFARKNMLRPSGLCPPW-DEDAHDET--AAGCDDSAGQYPDRHREGSTATXXXXXXXGAHDQE-ATSRGAGPSLASPG--RAAAVTDVSLIEEGG 3188
MGNSAGK SDE+LREAVQM+L VPM+GPAA XXXXXXXXXX E VWMG FGCA+ E EFFE FSASDATAM + QPGNLKL+AREALSNI RF+E+RQTSP M TV AS+RVLTRV PALL+ P LR+WCWARR LP++LS+LE EE+ P R XXXXXXXX +Q RGRFP P E DD SG G T XXXXXXX R SG D +GE G G XXXXXXXXXXXXX D+F VCFASVALH +LL FPGFCVD E +WDDYYTPIPELHYGI+EA+IIWAPG+AVTE+NM+QV+S +SNRVE LRLLA LLSLPLFL+TP+ LFYSL+NLAVV GRA G SGGG G+G + W LGGG G TRA EGG QSL EW+LQMLALLLRHGRPY ELLK+RGVDLAA+G PV+G++PR VE SAE+A+GYNCFRRCVFV+HSDDDLG+IALGLLRH+DD RL +TRP GS LSIHQE+LM+F++FVHENP FVPRLAASEEL RGTAVCVCHFL AV++TIE AEQ+ D +GG R +N R+ H GEEIG LVLL R+LL LS+N F+A L +M A RGA F+AP L D PGTTM+EVVLSL ++LARAG G V APALAAVARN CPF GM ++TAE LLDALE+YL GG D G GGG ++ W+VASLLLEGLAAAAV +HE+Q +L+ AM+ RSR+N A + GGGV RWLAA GGMLEGG G+G G D G +W A EA LASE +WFE+ V ++PWEGWAMR+VLWPLLSL+ AP P A A S+E+ RA AV A+ AR+ +LRP+GLCPPW DED DE A G +D G Y R G+ A + + A + P +SPG R AV+ VSL+ E G
Sbjct: 1 MGNSAGKSSDESLREAVQMLLEVPMVGPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVWMGVFGCAIEEGEFFEVFSASDATAMRLRQPGNLKLLAREALSNICRFVESRQTSPHMVTVYASIRVLTRVLPALLSTPELRSWCWARRTLPQLLSFLENNEEQSPRRNGQDVRQXXXXXXXXGRRQEQTPRGRFPTPXXXXXXXXXXXXMTSPPSPAELDDGVASSGSG----VSTGXXXXXXXSVNCRPYGGSGEDD-DGEGDGGKG------XXXXXXXXXXXXXRGGAGDEFPVCFASVALHAVTSLLSFPGFCVDDEAMEWDDYYTPIPELHYGIKEAAIIWAPGVAVTEHNMRQVSSFDSNRVETLRLLATLLSLPLFLDTPSPRTPTIPPQAPPLRRRRWPSRAPPPSIPGKPLPNPTAALAASRHLQFSSELFYSLLNLAVVSRAAPGGRAAGRASGGG--GQGVMRWFALGGGRTGGAAGTRAEAEGGAQSLAEWALQMLALLLRHGRPYDELLKQRGVDLAASGAAPVYGSVPRPVEFSAERARGYNCFRRCVFVVHSDDDLGAIALGLLRHVDDARLRRTRPQGSLLSIHQESLMVFAAFVHENPRFVPRLAASEELVRGTAVCVCHFLRGAVAATIEAAEQQHLDADADADGEAADAM---------------------EGGNR--GIDNRRKPH-GEEIGLLVLLSRLLLTLSDNVRFVAMLVDMLAAGGAG-GRGAEFAAPDLGDAPGTTMIEVVLSLCVYALARAGTGGAVVAPALAAVARNLCPFLTRGMRRQTAELLLDALEVYLVGGGSDGGLVEEEG--------EGGGATAPNPCYWSVASLLLEGLAAAAVFHHEEQAELVKAMIGRSRDNPTFLGKQXXXXXXXXXXXXXXXXXXAGQETRPWAGGGVLRWLAAHGGMLEGGTE--VGDGDGGVVGDVVG------SWS----REASAKEA----ERLASEQFWFESRVPSLPWEGWAMRRVLWPLLSLVTAPPPSTTAPGTPGPAG-----SREQDRAAAVRALASSARRKVLRPAGLCPPWGDEDGGDEDPRARGPEDGNGGYAQR---GAAAVGDAAGYLTSTPPDTAAAAXXAPGRSSPGASRGTAVSGVSLVGEDG 1096
BLAST of mRNA_P-fluviatile_contig17.2918.1 vs. uniprot
Match: D8LIB9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB9_ECTSI) HSP 1 Score: 284 bits (727), Expect = 2.030e-82 Identity = 213/371 (57.41%), Postives = 243/371 (65.50%), Query Frame = 3
Query: 270 EAFSASDATAMSVLQPGNLKLIAREALSNISRFMEARQTSPPMATVQASVRVLTRVFPALLADPALRAWCWARRPLPRVLSYLEQPEEEDPPD-----RNXXXXXXXXREQQPIARRGRFP---PLESD----------------DESGEGGGRRKPTXXXXXXXXXXRARSRALSGSDGGEGEEKGSSGDDAXXXXXXXXXXXXXXXXXXXXXDDFSVCFASVALHVAINLLCFPGFCVDGECSDWDDYYTPIPELHYGIREASIIWAPGIAVTENNMKQVNSLNSNRVEALRLLAALLSLPLFLETPTV----LFYSLINLAVV------GRARGGVSGGGAEGKGWIEWLGLGGGGXXXTRAGPEGGP 1280
E FSASDATAM + QPGNLKL+AREALSNISRFME+RQTSP M TV AS+RVLTRV PALL+ P LR+WCWARR LP++LSYL EE PP R EQ P RGRFP P++++ D+ G XXXXXXXXXX R GG G+ XXXXXXXXXXXXXXXXXXX DDF VCFASVALH A +LL FPGFCVD E +W+DYYTPIP+LHYGI+EA+IIWAPG+AVTE+NM+QV+S +SNRVE LRLLA LLSLPLFL+TP+ LFYSL+NLAVV G A G GGG G+G + W G GG GP G P
Sbjct: 27 EVFSASDATAMRLRQPGNLKLLAREALSNISRFMESRQTSPHMVTVNASIRVLTRVLPALLSSPELRSWCWARRTLPQLLSYLRNNEEHSPPRNGQDVRQQQQQQGRRXEQTP---RGRFPTPEPIDAEXXXXXDTTSPPSPTELDDGVASSGXXXXXXXXXXXXXXXXXRGGVNCRPYGGSGDGDDXXXXXXXXXXXXXXXXXXXXXXXXXAGDDFPVCFASVALHAATSLLSFPGFCVDDEAMEWNDYYTPIPDLHYGIKEAAIIWAPGVAVTEHNMRQVSSFDSNRVETLRLLATLLSLPLFLDTPSPFSSELFYSLLNLAVVNKAVPGGEAAGRAGGGG--GQGVMRWFGPWGG------PGPGGPP 386
BLAST of mRNA_P-fluviatile_contig17.2918.1 vs. uniprot
Match: D8LIC0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC0_ECTSI) HSP 1 Score: 284 bits (727), Expect = 2.880e-80 Identity = 168/320 (52.50%), Postives = 191/320 (59.69%), Query Frame = 3
Query: 1308 MLALLLRHGRPYGELLKERGVDLAATGTLPVFGAIPRTVELSAEKAKGYNCFRRCVFVLHSDDDLGSIALGLLRHMDDVRLGKTRPHGSA--LSIHQEALMIFSSFVHENPLFVPRLAASEELTRGTAVCVCHFLETAVSSTIEYAEQRLRQEDVQQXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDGGGRPGSEENVRRHHMGEEIGQLVLLGRVLLALSENESFMAALAEMPAVSRTRVRRGAGFSAPALEDVPGTTMLEVVLSLSAWSLARAGRGATVAAPALAAVARNACPFAKSGMMKETAEWLLDALEMYLAEG 2261
MLALLLRHGRPY ELLK+RGVDLAA+G PVFG++PR VE SAE+A+GYNCFRRCVFV+HSDDDLG+IALGLLRHMDD RL +TRP GS LSIHQE LMIF++FVHENP FVPRLAASEE +G LVLL R+LL LS+NE F+A L +M A RGA F+AP L D PGTTM+EVVLSL ++LARAG G V APALAAVARN CPF GM ++TAE LLDALE+YL G
Sbjct: 1 MLALLLRHGRPYDELLKQRGVDLAASGAAPVFGSVPRPVEFSAERARGYNCFRRCVFVVHSDDDLGAIALGLLRHMDDSRLRRTRPQGSLSLLSIHQETLMIFAAFVHENPRFVPRLAASEE------------------------------------------------------------------------------------VGLLVLLSRLLLTLSDNERFVAMLVDMLAAGGGAGGRGAEFAAPDLGDAPGTTMIEVVLSLCVYALARAGTGGAVVAPALAAVARNLCPFLTRGMRRQTAESLLDALEVYLVGG 236 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig17.2918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig17.2918.1 >prot_P-fluviatile_contig17.2918.1 ID=prot_P-fluviatile_contig17.2918.1|Name=mRNA_P-fluviatile_contig17.2918.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1123bp MGNSAGKQSDENLREAVQMVLRVPMIGPAAAAAAAAGAGSSDAGGDGSVEback to top mRNA from alignment at P-fluviatile_contig17:267895..283565- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig17.2918.1 ID=mRNA_P-fluviatile_contig17.2918.1|Name=mRNA_P-fluviatile_contig17.2918.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=15671bp|location=Sequence derived from alignment at P-fluviatile_contig17:267895..283565- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig17:267895..283565- >mRNA_P-fluviatile_contig17.2918.1 ID=mRNA_P-fluviatile_contig17.2918.1|Name=mRNA_P-fluviatile_contig17.2918.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6738bp|location=Sequence derived from alignment at P-fluviatile_contig17:267895..283565- (Porterinema fluviatile SAG_2381)back to top |