mRNA_P-fluviatile_contig16.2789.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: D7FN17_ECTSI (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN17_ECTSI) HSP 1 Score: 361 bits (927), Expect = 3.920e-119 Identity = 177/219 (80.82%), Postives = 198/219 (90.41%), Query Frame = 1
Query: 220 MSSSVKNAYLVAYNLACAGGWGYILLACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKAAAAE 876
M S +K+ YL+AYNLACA GW Y+L ACVSHIL G+ PQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPW+TTLMQV SRI+LVWGFMWAVP TQGQLGS+LCITSWACVEIPRYLFYT GVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTM+A LP+L+ ++ TLRL GP++VSGY++ L +LAVYVPG P+MYMNMVGNRRSAFKKR A A++
Sbjct: 1 MGSPIKDVYLIAYNLACASGWSYVLFACVSHILAGNEPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWVTTLMQVSSRIILVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLKNAQDTLRLGVGPISVSGYIVTLALLAVYVPGGPYMYMNMVGNRRSAFKKRNAGASK 219
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A835ZGJ3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGJ3_9STRA) HSP 1 Score: 206 bits (523), Expect = 5.170e-59 Identity = 107/214 (50.00%), Postives = 150/214 (70.09%), Query Frame = 1
Query: 238 NAYLVAYNLACAGGWGYILLACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKAAAAEA 879
+AYL AYNLACAGGW + L+ +G+ + ++ + + VQT A+ME+LH+++G+V SPWMTTL+QV SR+V+ WGF+++ +Q L SWA VE+PRYLFY ++ + P+PLF+LRYSLFAVLYP+GI GE+MT+V L K+ + LA G +++S Y +ALL+LA YVPGAPFMY +MV RR FK+RKAA+ +A
Sbjct: 5 SAYLGAYNLACAGGWAFALVLFAKAQYEGASWRETWNSMSTTVMAVQTVAVMEILHSLVGLVPSPWMTTLLQVSSRLVVAWGFLYSCEASQDHYAMALTTVSWALVEVPRYLFYVFNIMGNVPYPLFWLRYSLFAVLYPSGITGEIMTIVNGFDCL-KALKPVPLAGG-ISISMYHMALLVLATYVPGAPFMYSHMVTTRRKQFKRRKAASKKA 216
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A7S2U8Y3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8Y3_9STRA) HSP 1 Score: 179 bits (454), Expect = 2.050e-47 Identity = 110/223 (49.33%), Postives = 141/223 (63.23%), Query Frame = 1
Query: 232 VKNAYLVAYNLACAGGWGYIL-LACVSHILDGSGPQALYDEVEKV------LQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVL-----KSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKA 864
+K+AYL+AYN AC GGW Y+L LA S I S P +V V L IVQ+AALME++HA +G+VRSP + T MQV SRI ++ + P Q Q G+ L + SWA VE+PRY FY +L K +P+PLF+LRYSLFA+LYPTGI GEV +AA K + L L +++ Y L L + +YVPG+P M MNMVGNR+SAFKKR A
Sbjct: 3 LKDAYLIAYNAACCGGWAYVLSLALPSVIGSASSPLEALSQVYAVPNLALVLNIVQSAALMEIVHAAVGLVRSPLVVTAMQVASRIAAIFAISNS-PQAQVQFGAGLMVISWALVEVPRYAFYMAALLTGDATKKTPYPLFWLRYSLFAILYPTGITGEVTVFLAAA----KDDAFLNLYGESLSIIMYYLVLSLPIIYVPGSPVMIMNMVGNRKSAFKKRFA 220
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A6G0XHX3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHX3_9STRA) HSP 1 Score: 172 bits (436), Expect = 2.580e-46 Identity = 99/218 (45.41%), Postives = 137/218 (62.84%), Query Frame = 1
Query: 232 VKNAYLVAYNLACAGGWGYILLACVSHI-----LDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGP-VAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKAA 867
+KN YL YNLAC GW Y+L + +D S + L+ VE L+IVQTAA+ME+LHAM+G+VRSP +T++QV SR+ L+W VP T+ G ++ +TSW+ VE+PRY FY + + P LF+LRY LF VLYPTGI+GEV M++ALP + +++ VA+S + L L VYVPG+PFMY NM R+ A+ K+ A
Sbjct: 2 IKNLYLTLYNLACCAGWAYVLGLTFQTVNQDRNIDVSAAK-LWAIVEIPLKIVQTAAIMEILHAMVGIVRSPVFSTVLQVSSRLALLWMINDLVPETRAHWGFVMMVTSWSLVEVPRYAFYALNLWNAVPDWLFFLRYHLFMVLYPTGISGEVSCMLSALPYVTNGAYAIQMPNDHNVAISLQFMIYLTLVVYVPGSPFMYQNMNNMRKKAYAKKNEA 218
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A2D4CGE6_PYTIN (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGE6_PYTIN) HSP 1 Score: 171 bits (432), Expect = 1.120e-45 Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 1
Query: 226 SSVKNAYLVAYNLACAGGWGYILLACVSHILDGSGP--------QALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAG-PVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKAAAA 873
+++ N YL+AYN A A GW Y+L V+ +L G ++ +D VE L++VQ+AA ME+LHA LG+VRSP +T MQVGSR+ LVWG P ++ Q G L + SW VE+PRY FY + P +F+LR LF VLYP+G+ GEV+ M++ALP L+ ++L VAVS Y + +++L +Y+PG P MY +M+ R A+ K K+ A
Sbjct: 5 NALLNLYLLAYNAASAAGWAYVLFLTVTTVLAGREQGKDWSAISRSTWDTVELPLKVVQSAAFMEILHAALGLVRSPLGSTFMQVGSRLWLVWGINVLCPDSRYQFGFPLMVASWGLVEVPRYTFYALNLFNIVPSFVFFLRXHLFMVLYPSGVGGEVLCMISALPYLKSGAYAVQLPNSLNVAVSLYTVVIMMLIIYIPGLPVMYSHMLTQRNRAYSKXKSKTA 229
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A0S4JJY4_BODSA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JJY4_BODSA) HSP 1 Score: 179 bits (453), Expect = 2.450e-44 Identity = 94/218 (43.12%), Postives = 140/218 (64.22%), Query Frame = 1
Query: 241 AYLVAYNLACAGGWGYILLACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKAAAAEATKKAS 894
AYLV YNL A GW Y+L V+ L+G P A + ++ L + Q+ A +E+LH+ L +V SP M+T MQV SR ++WG+ + Q L +TSW+ VE+PRYLFY +L S PFPLF+LRY+LFA+LYPTGI+GE++ +V +LP L ++ +V + L+L +L++Y+PG+PFM+++MV R+ +FK RK A+ KA+
Sbjct: 3 AYLVLYNLVNAIGWAYVLYLSVTSFLEGKSPAAAWKAIQLPLLVTQSLAGLEILHSFLRLVPSPIMSTFMQVFSRYAVMWGYTYVFAEAQAHWSLYLMVTSWSLVEVPRYLFYAVNLLGSVPFPLFWLRYTLFAILYPTGISGEILQIVTSLPVLLRT-----------SVPCWYLSLFLLSLYLPGSPFMFLHMVTQRKKSFKARKEKQLAASGKAA 209
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A7S3HHK7_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHK7_9STRA) HSP 1 Score: 166 bits (421), Expect = 3.830e-44 Identity = 96/224 (42.86%), Postives = 136/224 (60.71%), Query Frame = 1
Query: 220 MSSSVKNAYLVAYNLACAGGWGYILLACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGPVAVSGYVLALLILAV-YVPGAPFMYMNMVGNRRSAFKKRKAAAAEATKK 888
M+ + YL+AYNLAC GW Y+L CV HI + + EVE L+IVQTAA++EVLH+M+G+V+SPW T MQV SR+ +W M Q + +L TSW VE+PRYLFY +L + P+PLF+LRYSLFAVLYPTGI GE+ TM A + P+ ++++++++A+ Y+PG+P M+ +MV R F+ K E+ K
Sbjct: 1 MAKGLALVYLLAYNLACCAGWAYVLFICVKHIRAETIADT-WSEVELPLKIVQTAAVLEVLHSMVGLVKSPWATAFMQVFSRVWTLWAIMDTTDAAQTTVFFVLACTSWGLVEVPRYLFYALNLLNAVPYPLFWLRYSLFAVLYPTGITGELGTMYHAFNFFITQAP---IQDQPLFRQIHLVSIVLVAITYIPGSPKMFGHMVKTRSKQFELYKNGGKESGDK 220
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A7S2SGL6_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGL6_9STRA) HSP 1 Score: 175 bits (443), Expect = 5.600e-43 Identity = 101/215 (46.98%), Postives = 134/215 (62.33%), Query Frame = 1
Query: 241 AYLVAYNLACAGGWGYILLACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLK-SSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKAAAAEAT 882
AYL YN+ A GWGY+L + ++ G P + + L +VQ+ +E+ HA+LG+VRSP T MQV SR+V+VWG + +P Q L + SWA VEI RY FY ++ ++PFPLF+LRYSLF VLYPTGI GEV+ ++ ++P + S PV Y +LILAVYVPG+PFM NM NR+SA KKRKAAAA A+
Sbjct: 5 AYLTLYNVLSAAGWGYVLYLALENLKSGGTPAEAWANLGLPLTVVQSTMALEIFHALLGLVRSPVFVTFMQVTSRLVVVWGATYWLPACQEHWSLYLIVVSWAIVEIVRYSFYASNLVTGTTPFPLFWLRYSLFMVLYPTGITGEVVQLLVSMPYWQVS--------APV---WYRSLILILAVYVPGSPFMINNMWRNRKSALKKRKAAAAGAS 208
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A024TZ79_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZ79_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.970e-42 Identity = 96/215 (44.65%), Postives = 134/215 (62.33%), Query Frame = 1
Query: 232 VKNAYLVAYNLACAGGWGYIL-----LACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLA-AGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKR 858
+K AYLV +NLA + GW Y+L L + S + L+ ++ L++VQT A+ EVLHAMLG+VRSP +TLMQV SR+ LVW P ++ G +L + SW+ VE+PRY FY +L++ P LF+LRY LF VLYP+G+ GEV MV ALP L ++++ ++VS YV+ LL L VY PG PFMY +M R+ A+ K+
Sbjct: 4 IKTAYLVLFNLASSLGWAYVLGQTFQLVYADQDIALSSAK-LWGVIDTPLKVVQTMAVFEVLHAMLGLVRSPVGSTLMQVSSRLFLVWAINVLCPDSRYHWGFILMVASWSLVEVPRYAFYALNLLEAVPDWLFFLRYHLFMVLYPSGVTGEVTCMVKALPFLSTGAYSIQMPNTHNISVSLYVIVLLTLVVYAPGLPFMYTHMNVQRKKAYAKK 217
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A485KQR1_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQR1_9STRA) HSP 1 Score: 160 bits (405), Expect = 6.880e-42 Identity = 95/215 (44.19%), Postives = 133/215 (61.86%), Query Frame = 1
Query: 232 VKNAYLVAYNLACAGGWGYIL-----LACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLA-AGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKR 858
+K YLV +NLA GW Y+L L ++ S Q L+ VE L+IVQT ALMEVLHAMLG+VRSP +T MQV SR+ L+W P ++ G +L + SW+ VE+PRY FY +L + P LF+LRY LF VLYP+GI GEV M+ ALP L ++++ VA+S Y++ ++ L Y+PG+PFM+ +M R+ A+ K+
Sbjct: 2 IKTTYLVLFNLASCLGWAYVLGQTFQLVYADQDIEKSS-QTLWGVVEGPLKIVQTMALMEVLHAMLGLVRSPVGSTFMQVSSRLFLLWAINVLCPDSRYHWGFILMVASWSLVEVPRYAFYALNLLDAVPDWLFFLRYHLFMVLYPSGITGEVTCMLKALPLLASGAYSVQMPNTHNVAISLYIVVVITLITYIPGSPFMFNHMNIQRKKAYAKK 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig16.2789.1 >prot_P-fluviatile_contig16.2789.1 ID=prot_P-fluviatile_contig16.2789.1|Name=mRNA_P-fluviatile_contig16.2789.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=226bp MSSSVKNAYLVAYNLACAGGWGYILLACVSHILDGSGPQALYDEVEKVLQback to top mRNA from alignment at P-fluviatile_contig16:1909540..1913154+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig16.2789.1 ID=mRNA_P-fluviatile_contig16.2789.1|Name=mRNA_P-fluviatile_contig16.2789.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3615bp|location=Sequence derived from alignment at P-fluviatile_contig16:1909540..1913154+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig16:1909540..1913154+ >mRNA_P-fluviatile_contig16.2789.1 ID=mRNA_P-fluviatile_contig16.2789.1|Name=mRNA_P-fluviatile_contig16.2789.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1356bp|location=Sequence derived from alignment at P-fluviatile_contig16:1909540..1913154+ (Porterinema fluviatile SAG_2381)back to top |