mRNA_P-fluviatile_contig16.2789.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig16.2789.1
Unique NamemRNA_P-fluviatile_contig16.2789.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: D7FN17_ECTSI (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN17_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 3.920e-119
Identity = 177/219 (80.82%), Postives = 198/219 (90.41%), Query Frame = 1
Query:  220 MSSSVKNAYLVAYNLACAGGWGYILLACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKAAAAE 876
            M S +K+ YL+AYNLACA GW Y+L ACVSHIL G+ PQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPW+TTLMQV SRI+LVWGFMWAVP TQGQLGS+LCITSWACVEIPRYLFYT GVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTM+A LP+L+ ++ TLRL  GP++VSGY++ L +LAVYVPG P+MYMNMVGNRRSAFKKR A A++
Sbjct:    1 MGSPIKDVYLIAYNLACASGWSYVLFACVSHILAGNEPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWVTTLMQVSSRIILVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLKNAQDTLRLGVGPISVSGYIVTLALLAVYVPGGPYMYMNMVGNRRSAFKKRNAGASK 219          
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A835ZGJ3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGJ3_9STRA)

HSP 1 Score: 206 bits (523), Expect = 5.170e-59
Identity = 107/214 (50.00%), Postives = 150/214 (70.09%), Query Frame = 1
Query:  238 NAYLVAYNLACAGGWGYILLACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKAAAAEA 879
            +AYL AYNLACAGGW + L+       +G+  +  ++ +   +  VQT A+ME+LH+++G+V SPWMTTL+QV SR+V+ WGF+++   +Q      L   SWA VE+PRYLFY   ++ + P+PLF+LRYSLFAVLYP+GI GE+MT+V     L K+   + LA G +++S Y +ALL+LA YVPGAPFMY +MV  RR  FK+RKAA+ +A
Sbjct:    5 SAYLGAYNLACAGGWAFALVLFAKAQYEGASWRETWNSMSTTVMAVQTVAVMEILHSLVGLVPSPWMTTLLQVSSRLVVAWGFLYSCEASQDHYAMALTTVSWALVEVPRYLFYVFNIMGNVPYPLFWLRYSLFAVLYPSGITGEIMTIVNGFDCL-KALKPVPLAGG-ISISMYHMALLVLATYVPGAPFMYSHMVTTRRKQFKRRKAASKKA 216          
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A7S2U8Y3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8Y3_9STRA)

HSP 1 Score: 179 bits (454), Expect = 2.050e-47
Identity = 110/223 (49.33%), Postives = 141/223 (63.23%), Query Frame = 1
Query:  232 VKNAYLVAYNLACAGGWGYIL-LACVSHILDGSGPQALYDEVEKV------LQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVL-----KSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKA 864
            +K+AYL+AYN AC GGW Y+L LA  S I   S P     +V  V      L IVQ+AALME++HA +G+VRSP + T MQV SRI  ++    + P  Q Q G+ L + SWA VE+PRY FY   +L     K +P+PLF+LRYSLFA+LYPTGI GEV   +AA     K  + L L    +++  Y L L +  +YVPG+P M MNMVGNR+SAFKKR A
Sbjct:    3 LKDAYLIAYNAACCGGWAYVLSLALPSVIGSASSPLEALSQVYAVPNLALVLNIVQSAALMEIVHAAVGLVRSPLVVTAMQVASRIAAIFAISNS-PQAQVQFGAGLMVISWALVEVPRYAFYMAALLTGDATKKTPYPLFWLRYSLFAILYPTGITGEVTVFLAAA----KDDAFLNLYGESLSIIMYYLVLSLPIIYVPGSPVMIMNMVGNRKSAFKKRFA 220          
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A6G0XHX3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHX3_9STRA)

HSP 1 Score: 172 bits (436), Expect = 2.580e-46
Identity = 99/218 (45.41%), Postives = 137/218 (62.84%), Query Frame = 1
Query:  232 VKNAYLVAYNLACAGGWGYILLACVSHI-----LDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGP-VAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKAA 867
            +KN YL  YNLAC  GW Y+L      +     +D S  + L+  VE  L+IVQTAA+ME+LHAM+G+VRSP  +T++QV SR+ L+W     VP T+   G ++ +TSW+ VE+PRY FY   +  + P  LF+LRY LF VLYPTGI+GEV  M++ALP +      +++     VA+S   +  L L VYVPG+PFMY NM   R+ A+ K+  A
Sbjct:    2 IKNLYLTLYNLACCAGWAYVLGLTFQTVNQDRNIDVSAAK-LWAIVEIPLKIVQTAAIMEILHAMVGIVRSPVFSTVLQVSSRLALLWMINDLVPETRAHWGFVMMVTSWSLVEVPRYAFYALNLWNAVPDWLFFLRYHLFMVLYPTGISGEVSCMLSALPYVTNGAYAIQMPNDHNVAISLQFMIYLTLVVYVPGSPFMYQNMNNMRKKAYAKKNEA 218          
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A2D4CGE6_PYTIN (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGE6_PYTIN)

HSP 1 Score: 171 bits (432), Expect = 1.120e-45
Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 1
Query:  226 SSVKNAYLVAYNLACAGGWGYILLACVSHILDGSGP--------QALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAG-PVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKAAAA 873
            +++ N YL+AYN A A GW Y+L   V+ +L G           ++ +D VE  L++VQ+AA ME+LHA LG+VRSP  +T MQVGSR+ LVWG     P ++ Q G  L + SW  VE+PRY FY   +    P  +F+LR  LF VLYP+G+ GEV+ M++ALP L+     ++L     VAVS Y + +++L +Y+PG P MY +M+  R  A+ K K+  A
Sbjct:    5 NALLNLYLLAYNAASAAGWAYVLFLTVTTVLAGREQGKDWSAISRSTWDTVELPLKVVQSAAFMEILHAALGLVRSPLGSTFMQVGSRLWLVWGINVLCPDSRYQFGFPLMVASWGLVEVPRYTFYALNLFNIVPSFVFFLRXHLFMVLYPSGVGGEVLCMISALPYLKSGAYAVQLPNSLNVAVSLYTVVIMMLIIYIPGLPVMYSHMLTQRNRAYSKXKSKTA 229          
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A0S4JJY4_BODSA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JJY4_BODSA)

HSP 1 Score: 179 bits (453), Expect = 2.450e-44
Identity = 94/218 (43.12%), Postives = 140/218 (64.22%), Query Frame = 1
Query:  241 AYLVAYNLACAGGWGYILLACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKAAAAEATKKAS 894
            AYLV YNL  A GW Y+L   V+  L+G  P A +  ++  L + Q+ A +E+LH+ L +V SP M+T MQV SR  ++WG+ +     Q      L +TSW+ VE+PRYLFY   +L S PFPLF+LRY+LFA+LYPTGI+GE++ +V +LP L ++           +V  + L+L +L++Y+PG+PFM+++MV  R+ +FK RK     A+ KA+
Sbjct:    3 AYLVLYNLVNAIGWAYVLYLSVTSFLEGKSPAAAWKAIQLPLLVTQSLAGLEILHSFLRLVPSPIMSTFMQVFSRYAVMWGYTYVFAEAQAHWSLYLMVTSWSLVEVPRYLFYAVNLLGSVPFPLFWLRYTLFAILYPTGISGEILQIVTSLPVLLRT-----------SVPCWYLSLFLLSLYLPGSPFMFLHMVTQRKKSFKARKEKQLAASGKAA 209          
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A7S3HHK7_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHK7_9STRA)

HSP 1 Score: 166 bits (421), Expect = 3.830e-44
Identity = 96/224 (42.86%), Postives = 136/224 (60.71%), Query Frame = 1
Query:  220 MSSSVKNAYLVAYNLACAGGWGYILLACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGPVAVSGYVLALLILAV-YVPGAPFMYMNMVGNRRSAFKKRKAAAAEATKK 888
            M+  +   YL+AYNLAC  GW Y+L  CV HI   +     + EVE  L+IVQTAA++EVLH+M+G+V+SPW T  MQV SR+  +W  M      Q  +  +L  TSW  VE+PRYLFY   +L + P+PLF+LRYSLFAVLYPTGI GE+ TM  A            +   P+    ++++++++A+ Y+PG+P M+ +MV  R   F+  K    E+  K
Sbjct:    1 MAKGLALVYLLAYNLACCAGWAYVLFICVKHIRAETIADT-WSEVELPLKIVQTAAVLEVLHSMVGLVKSPWATAFMQVFSRVWTLWAIMDTTDAAQTTVFFVLACTSWGLVEVPRYLFYALNLLNAVPYPLFWLRYSLFAVLYPTGITGELGTMYHAFNFFITQAP---IQDQPLFRQIHLVSIVLVAITYIPGSPKMFGHMVKTRSKQFELYKNGGKESGDK 220          
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A7S2SGL6_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGL6_9STRA)

HSP 1 Score: 175 bits (443), Expect = 5.600e-43
Identity = 101/215 (46.98%), Postives = 134/215 (62.33%), Query Frame = 1
Query:  241 AYLVAYNLACAGGWGYILLACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLK-SSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLAAGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKRKAAAAEAT 882
            AYL  YN+  A GWGY+L   + ++  G  P   +  +   L +VQ+   +E+ HA+LG+VRSP   T MQV SR+V+VWG  + +P  Q      L + SWA VEI RY FY   ++  ++PFPLF+LRYSLF VLYPTGI GEV+ ++ ++P  + S         PV    Y   +LILAVYVPG+PFM  NM  NR+SA KKRKAAAA A+
Sbjct:    5 AYLTLYNVLSAAGWGYVLYLALENLKSGGTPAEAWANLGLPLTVVQSTMALEIFHALLGLVRSPVFVTFMQVTSRLVVVWGATYWLPACQEHWSLYLIVVSWAIVEIVRYSFYASNLVTGTTPFPLFWLRYSLFMVLYPTGITGEVVQLLVSMPYWQVS--------APV---WYRSLILILAVYVPGSPFMINNMWRNRKSALKKRKAAAAGAS 208          
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A024TZ79_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZ79_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.970e-42
Identity = 96/215 (44.65%), Postives = 134/215 (62.33%), Query Frame = 1
Query:  232 VKNAYLVAYNLACAGGWGYIL-----LACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLA-AGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKR 858
            +K AYLV +NLA + GW Y+L     L      +  S  + L+  ++  L++VQT A+ EVLHAMLG+VRSP  +TLMQV SR+ LVW      P ++   G +L + SW+ VE+PRY FY   +L++ P  LF+LRY LF VLYP+G+ GEV  MV ALP L     ++++     ++VS YV+ LL L VY PG PFMY +M   R+ A+ K+
Sbjct:    4 IKTAYLVLFNLASSLGWAYVLGQTFQLVYADQDIALSSAK-LWGVIDTPLKVVQTMAVFEVLHAMLGLVRSPVGSTLMQVSSRLFLVWAINVLCPDSRYHWGFILMVASWSLVEVPRYAFYALNLLEAVPDWLFFLRYHLFMVLYPSGVTGEVTCMVKALPFLSTGAYSIQMPNTHNISVSLYVIVLLTLVVYAPGLPFMYTHMNVQRKKAYAKK 217          
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Match: A0A485KQR1_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQR1_9STRA)

HSP 1 Score: 160 bits (405), Expect = 6.880e-42
Identity = 95/215 (44.19%), Postives = 133/215 (61.86%), Query Frame = 1
Query:  232 VKNAYLVAYNLACAGGWGYIL-----LACVSHILDGSGPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQLGSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMVAALPELEKSRSTLRLA-AGPVAVSGYVLALLILAVYVPGAPFMYMNMVGNRRSAFKKR 858
            +K  YLV +NLA   GW Y+L     L      ++ S  Q L+  VE  L+IVQT ALMEVLHAMLG+VRSP  +T MQV SR+ L+W      P ++   G +L + SW+ VE+PRY FY   +L + P  LF+LRY LF VLYP+GI GEV  M+ ALP L     ++++     VA+S Y++ ++ L  Y+PG+PFM+ +M   R+ A+ K+
Sbjct:    2 IKTTYLVLFNLASCLGWAYVLGQTFQLVYADQDIEKSS-QTLWGVVEGPLKIVQTMALMEVLHAMLGLVRSPVGSTFMQVSSRLFLLWAINVLCPDSRYHWGFILMVASWSLVEVPRYAFYALNLLDAVPDWLFFLRYHLFMVLYPSGITGEVTCMLKALPLLASGAYSVQMPNTHNVAISLYIVVVITLITYIPGSPFMFNHMNIQRKKAYAKK 215          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN17_ECTSI3.920e-11980.82Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A835ZGJ3_9STRA5.170e-5950.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7S2U8Y3_9STRA2.050e-4749.33Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A6G0XHX3_9STRA2.580e-4645.41Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A2D4CGE6_PYTIN1.120e-4542.67Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A0S4JJY4_BODSA2.450e-4443.12Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7S3HHK7_9STRA3.830e-4442.86Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7S2SGL6_9STRA5.600e-4346.98Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A024TZ79_9STRA1.970e-4244.65Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A485KQR1_9STRA6.880e-4244.19Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig16contigP-fluviatile_contig16:1909540..1913154 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score361.7
Seed ortholog evalue2.5e-97
Seed eggNOG ortholog2880.D7FN17
KEGG rclassRC00770,RC01095
KEGG koko:K10703
KEGG ReactionR07760,R10827
KEGG Pathwayko00062,ko01040,ko01110,ko01212,map00062,map01040,map01110,map01212
KEGG ModuleM00415
EggNOG free text desc.3-hydroxy-lignoceroyl-CoA dehydratase activity
EggNOG OGsCOG5198@1,KOG3187@2759
EC4.2.1.134
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPutative tyrosine phosphatase
Ec32 orthologEc-25_001190.1
Exons4
Model size1826
Cds size678
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig16.2789.1prot_P-fluviatile_contig16.2789.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig16 1909759..1912225 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815703.124521-UTR-P-fluviatile_contig16:1909539..19097581622815703.124521-UTR-P-fluviatile_contig16:1909539..1909758Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 1909540..1909758 +
1693562996.0124598-UTR-P-fluviatile_contig16:1909539..19097581693562996.0124598-UTR-P-fluviatile_contig16:1909539..1909758Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 1909540..1909758 +
1622815703.190649-UTR-P-fluviatile_contig16:1912225..19131541622815703.190649-UTR-P-fluviatile_contig16:1912225..1913154Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 1912226..1913154 +
1693562996.0551085-UTR-P-fluviatile_contig16:1912225..19131541693562996.0551085-UTR-P-fluviatile_contig16:1912225..1913154Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 1912226..1913154 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815703.1423123-CDS-P-fluviatile_contig16:1909758..19099351622815703.1423123-CDS-P-fluviatile_contig16:1909758..1909935Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1909759..1909935 +
1693562996.0227559-CDS-P-fluviatile_contig16:1909758..19099351693562996.0227559-CDS-P-fluviatile_contig16:1909758..1909935Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1909759..1909935 +
1622815703.1525953-CDS-P-fluviatile_contig16:1910466..19106361622815703.1525953-CDS-P-fluviatile_contig16:1910466..1910636Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1910467..1910636 +
1693562996.0304828-CDS-P-fluviatile_contig16:1910466..19106361693562996.0304828-CDS-P-fluviatile_contig16:1910466..1910636Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1910467..1910636 +
1622815703.1637921-CDS-P-fluviatile_contig16:1911421..19115631622815703.1637921-CDS-P-fluviatile_contig16:1911421..1911563Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1911422..1911563 +
1693562996.038197-CDS-P-fluviatile_contig16:1911421..19115631693562996.038197-CDS-P-fluviatile_contig16:1911421..1911563Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1911422..1911563 +
1622815703.1795404-CDS-P-fluviatile_contig16:1912036..19122251622815703.1795404-CDS-P-fluviatile_contig16:1912036..1912225Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1912037..1912225 +
1693562996.0456467-CDS-P-fluviatile_contig16:1912036..19122251693562996.0456467-CDS-P-fluviatile_contig16:1912036..1912225Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1912037..1912225 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig16.2789.1

>prot_P-fluviatile_contig16.2789.1 ID=prot_P-fluviatile_contig16.2789.1|Name=mRNA_P-fluviatile_contig16.2789.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=226bp
MSSSVKNAYLVAYNLACAGGWGYILLACVSHILDGSGPQALYDEVEKVLQ
IVQTAALMEVLHAMLGVVRSPWMTTLMQVGSRIVLVWGFMWAVPPTQGQL
GSLLCITSWACVEIPRYLFYTCGVLKSSPFPLFYLRYSLFAVLYPTGIAG
EVMTMVAALPELEKSRSTLRLAAGPVAVSGYVLALLILAVYVPGAPFMYM
NMVGNRRSAFKKRKAAAAEATKKAS*
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mRNA from alignment at P-fluviatile_contig16:1909540..1913154+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig16.2789.1 ID=mRNA_P-fluviatile_contig16.2789.1|Name=mRNA_P-fluviatile_contig16.2789.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3615bp|location=Sequence derived from alignment at P-fluviatile_contig16:1909540..1913154+ (Porterinema fluviatile SAG_2381)
GGACTCGACGCCCTAGAGAGACCGAGTGGGCAACGCAACACCCAGCGGGA GATATAAAAATGTATTCAGTGTTCATACGTAAGCGCGCGAACGGAAGGGA TACTGCAGACAGGATAAATTATTATCTCGCCGGGTGTACATTGCCCCCCG AGAGAGCGCGTGAATTCGTCAGATGCAGCTAGCGATTGCTTCTTGTAGGG TCAGTTGGTACAGGGCCACATGTCTTCCTCTGTGAAGAACGCTTACCTTG TGGCCTACAATCTAGCCTGCGCCGGGGGGTGGGGCTATATTCTCCTGGCG TGCGTTAGCCACATCCTTGACGGGAGCGGGCCGCAGGCGCTATACGATGA GGTGGAGAAGGTGCTGCAGATTGTGCAGACGGCTGCTTTGATGGAGGTGC GTGCGTTTCCGCCTGGCGCCTATCCTGTTCCATATGTGTCGATTTTTGTG TGCTCCTGGCTGCAGTTCGCACATGTGTCGTTGCGAAAGCGCGATTTACG CGATAGTCAGCGGTTGTGGTGCAAAATCATGATGTTCCTCCACACCTCCG CGCAGGCTTCAAGCCTCGCGCCGAGTTGAAGAAAGATCAAGGCATCAAGG CTGAGCATTTTGCTTCATTGCAGCGGAATTCAATAACGTTGCTACACATC TGCATTATTCCGCGCTGGGGGAGGAGAGACAGACAGGCGGAACTAGTGGA AAACCGCACGCGCGCGTGTGGTGTGTTGAGGACTAAACTGAAGGATATGA ATCGCTCCGCGCCGTACACCACCGGCCCGTGGTCGAAACCCAGACACCGC GAGAGTAACGCTGTGATCGCAATTTTGTGTTGACCTCGCGTCAAGCCTTT TCGATGTCCCCTTCCGTCCTATTCGCTCTTGTATTTTGCCTCCCCGCCCT CCGCCCATCACCCGCTTCCACTTGCAGGTTCTTCACGCCATGCTCGGGGT CGTCCGCTCTCCTTGGATGACAACCCTCATGCAAGTGGGGTCGAGAATCG TCCTGGTGTGGGGCTTCATGTGGGCCGTCCCGCCAACCCAGGGGCAGCTG GGCTCACTGCTGTGCATCACGAGCTGGGCCTGCGTCGAGATTCCGAGGTA GACGGGAGAAATGAGAGAGGTAGCTGATGATGTGTTAGCCAATGGTTGCA TCGCACGTTCGGCTCGCTCTTGCCGCATGTCTTTTGAACGCAAATTTTGA AAGTGGCTCGCACCATGAAGTGGCATCTGGGCTGTCTGAGGGTAACGGAA GGTGCCCCGTGGATTTCCGCACAACCTCATATCAATGTCGGGCCGACACA ACCGCGGCACATCGGCGTACCTGTTCGAAATATCTAAGTAAGGAACCCTC AAAATAGATCGATTTTCTAGCCTGAATTACTCCACAACCAGTGACTTGTG TTCGCCAACATCAGTGATGCGAAAAGCTTGCCGGATATCTCCCAACACGT ATGTTTCGTCGTCCGTGGCCTCCCCCATTCGGGGTTGAAATGCGCATGGA CGATCGACTTTGAGATGGAGTGTTTATCTCGTGTATTTCCGATGCGCTAC CCAACCGTTCACGTCGCACTGCTGTGCGGGAGAGATTCGTCTGCGCAGAA ATCTTCTCCACGTGAGCAGAGTCTTGCACGCCCCGAAGGGGCGCAGCAGC ACAGCACCGACAGCAACTTCAAACACGAGGATGTGTCCGCACACGCTGCT GCCCGAGGGGTGAAGTTAGGCGCAGGCAACGCCAGAGGAACGCTTGTTTA CTACGCGACGGCCTGGCTCACCTTGCCCCTCCTCTCGCTCATTGAGAAGA ATCCACGAATTTCACCCCTTGCTCTTGTTCACCCACTTTTTTTTTTGCGT GGGATGGGCTGGCATGGTACGGATATGCGCAGGTATCTGTTCTACACATG CGGTGTTCTGAAGAGCTCCCCGTTTCCCCTGTTCTACTTACGGTACTCAC TCTTCGCCGTCCTCTACCCCACGGGGATCGCGGGCGAGGTCATGACCATG GTGGCTGCTCTTCCGGAGCTAGAGGTGCGTTTCGTCACCACTGCTTGCTG CCGTTTGTTGTCGTATGCGAAAGAGCCTGTGACTCGAGGCCGGCCGCTCT CGAGCCCTAGGTAGTCGTGAAAGGCTTCCTCGTCCATTCTGCGGCCGTTT CCACGGCTTCCGGAGAGACGGAAGAACTGGAAGTCTGTAGCTCGAGCATT AGCTGGGACGCTTGAGGCGAACAAAAACAGACGAGGCGATGATCCTCGCT GCGGGCAGCTACCTTACCCGCACCTTTTCCTCCTGCCCGCCAGTTGAGTC ATGATGAATGCGAACTCGTGATGATTTGCATCACCGTCACCAGTCTCAGC AGCCCCCCCTGGACATTTCGTGCCTTGCCTTTCCTCTCGTCTTCCTCATC CCTGAGCGGGCCTCTATTTGAATTTTTTGTTAATCGTTGCATCAGTCGAT CGCTCTGCCAAGATTCTCCTCCTTGCTACCCCCCCGCTTGCGCGCAGAAA TCGCGGAGCACACTCCGGCTAGCGGCGGGTCCCGTCGCCGTCTCCGGCTA CGTTCTCGCGCTGCTGATTCTGGCCGTGTACGTGCCCGGCGCGCCGTTCA TGTACATGAATATGGTAGGCAATCGGCGCTCGGCCTTCAAGAAGCGAAAG GCCGCTGCCGCAGAAGCCACTAAGAAGGCGTCGTAGATAGATTGTTGACC TCTTTTCAATTTACTCCTCACTGGGTGTGGCTCCTGTTCTTATTTTACGA CGTTCAGGGAACACCTGCCTTTGACGAAGAGCACATTTGAGGCGAAGACG GCGTAGTGTTCACATTGCAATCTGACTTTACGCGTGCATGCGGTACGATT GTGGGGTTCAAGCGATGAGTAATATGGTTTTCCATTTGTATCCTGCCGGG GGGGTTTTGTTTTTTGGACTAACAACCACCGGAGCCGTTTCACTCTACCA GGGCAACCGGCCTCTTGTTCTGGTGATAATAAATGATTTGGGGGTGTACT CATTCTGGCTTCTTGTGGGCGGGGCGATAGCGAGAAGGGAATCTTTTAGG GATTGGTCGAGTGTTCTGGTCACCGAAGAAATCGATTCAGAAGTACCAGA CATGGAGGGCATCTGCGATGCTGTCATATGCAGACGGGCGGCGCAAGGCG GCTTGACCGGCGAGTATTGCCCCTGCGTTCGGTAGTACTCCGGAGTAGTG CCGTTGACGGACTGGCTAAGAGGTAACGCGTGCTAGTTGCGAAGCAAGAC ATCATTATTCACGTGAAAACTTCTTGTGGTTTCTCCTGCGGTGGAGTGGG GCCAGGGGGTTAACGGTGGGACCGTGTCGTGGATGTCAACCTATGACTCC AGGCAAACCAGGGGGTCGTCATAGCCGACAATGTTCTGCGAGCAAGATAT GCCGAGCTCGAAAAGCACGTGAGATTACGTGTAGACCTACATGATTCCAT TTGTTTCTCTTAATTAGTGCAGCGTTTTTTTCGGTACTTGAGGGAGTGGT GGACGCAACTTCCATCTCCCCAACCAAAGAAACACATCTACGAACGGGAA TATACGCTATCCTCACAAAGTGTTGCTGAGACAACCGATGAACTCGACTC CAGAGTTACTCGAAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig16:1909540..1913154+

>mRNA_P-fluviatile_contig16.2789.1 ID=mRNA_P-fluviatile_contig16.2789.1|Name=mRNA_P-fluviatile_contig16.2789.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1356bp|location=Sequence derived from alignment at P-fluviatile_contig16:1909540..1913154+ (Porterinema fluviatile SAG_2381)
ATGTCTTCCTCTGTGAAGAACGCTTACCTTGTGGCCTACAATCTAGCCTG
CGCCGGGGGGTGGGGCTATATTCTCCTGGCGTGCGTTAGCCACATCCTTG
ACGGGAGCGGGCCGCAGGCGCTATACGATGAGGTGGAGAAGGTGCTGCAG
ATTGTGCAGACGGCTGCTTTGATGGAGATGTCTTCCTCTGTGAAGAACGC
TTACCTTGTGGCCTACAATCTAGCCTGCGCCGGGGGGTGGGGCTATATTC
TCCTGGCGTGCGTTAGCCACATCCTTGACGGGAGCGGGCCGCAGGCGCTA
TACGATGAGGTGGAGAAGGTGCTGCAGATTGTGCAGACGGCTGCTTTGAT
GGAGGTTCTTCACGCCATGCTCGGGGTCGTCCGCTCTCCTTGGATGACAA
CCCTCATGCAAGTGGGGTCGAGAATCGTCCTGGTGTGGGGCTTCATGTGG
GCCGTCCCGCCAACCCAGGGGCAGCTGGGCTCACTGCTGTGCATCACGAG
CTGGGCCTGCGTCGAGATTCCGAGGTTCTTCACGCCATGCTCGGGGTCGT
CCGCTCTCCTTGGATGACAACCCTCATGCAAGTGGGGTCGAGAATCGTCC
TGGTGTGGGGCTTCATGTGGGCCGTCCCGCCAACCCAGGGGCAGCTGGGC
TCACTGCTGTGCATCACGAGCTGGGCCTGCGTCGAGATTCCGAGGTATCT
GTTCTACACATGCGGTGTTCTGAAGAGCTCCCCGTTTCCCCTGTTCTACT
TACGGTACTCACTCTTCGCCGTCCTCTACCCCACGGGGATCGCGGGCGAG
GTCATGACCATGGTGGCTGCTCTTCCGGAGCTAGAGGTATCTGTTCTACA
CATGCGGTGTTCTGAAGAGCTCCCCGTTTCCCCTGTTCTACTTACGGTAC
TCACTCTTCGCCGTCCTCTACCCCACGGGGATCGCGGGCGAGGTCATGAC
CATGGTGGCTGCTCTTCCGGAGCTAGAGAAATCGCGGAGCACACTCCGGC
TAGCGGCGGGTCCCGTCGCCGTCTCCGGCTACGTTCTCGCGCTGCTGATT
CTGGCCGTGTACGTGCCCGGCGCGCCGTTCATGTACATGAATATGGTAGG
CAATCGGCGCTCGGCCTTCAAGAAGCGAAAGGCCGCTGCCGCAGAAGCCA
CTAAGAAGGCGTCGTAGAAATCGCGGAGCACACTCCGGCTAGCGGCGGGT
CCCGTCGCCGTCTCCGGCTACGTTCTCGCGCTGCTGATTCTGGCCGTGTA
CGTGCCCGGCGCGCCGTTCATGTACATGAATATGGTAGGCAATCGGCGCT
CGGCCTTCAAGAAGCGAAAGGCCGCTGCCGCAGAAGCCACTAAGAAGGCG
TCGTAG
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