mRNA_P-fluviatile_contig16.2767.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig16.2767.1
Unique NamemRNA_P-fluviatile_contig16.2767.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig16contigP-fluviatile_contig16:1697722..1699163 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1442
Cds size1044
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig16.2767.1prot_P-fluviatile_contig16.2767.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig16 1697902..1698945 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815679.570533-UTR-P-fluviatile_contig16:1697721..16979011622815679.570533-UTR-P-fluviatile_contig16:1697721..1697901Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 1697722..1697901 +
1693562884.6850908-UTR-P-fluviatile_contig16:1697721..16979011693562884.6850908-UTR-P-fluviatile_contig16:1697721..1697901Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 1697722..1697901 +
1622815679.5995517-UTR-P-fluviatile_contig16:1698945..16991631622815679.5995517-UTR-P-fluviatile_contig16:1698945..1699163Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 1698946..1699163 +
1693562884.7175136-UTR-P-fluviatile_contig16:1698945..16991631693562884.7175136-UTR-P-fluviatile_contig16:1698945..1699163Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 1698946..1699163 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815679.587871-CDS-P-fluviatile_contig16:1697901..16989451622815679.587871-CDS-P-fluviatile_contig16:1697901..1698945Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1697902..1698945 +
1693562884.7045546-CDS-P-fluviatile_contig16:1697901..16989451693562884.7045546-CDS-P-fluviatile_contig16:1697901..1698945Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1697902..1698945 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig16.2767.1

>prot_P-fluviatile_contig16.2767.1 ID=prot_P-fluviatile_contig16.2767.1|Name=mRNA_P-fluviatile_contig16.2767.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=348bp
MPRGRERDSSILVSRRTRKCTPTSSLICPLSTGALPILGSFVCSQQGCIK
CGTHFHIRYHDTAPDLPKAHADSSAWRCAGASPSMTLTNPGGKAKFSQTL
LRSRPAPFPPSSCPAGSARTSSARREDSSPPSPGAAIAECGSAAPGDILP
HEVLWPSDAAGDASDAKNAVADLTSAAMPRMAANSRGSSAIFAVFGRGSE
ALRPSLPVFVAAAGVFSSAASSSSQSSHSLAASPPPLSLLASHSQLRGIP
GSAPPSSRCFRNSGSSFFCMPDAATTCSGCQRTRCSAAARRSEATFTSQL
FADLRILALVSSAASPTVAGEGLLQSSIRGMARPVPSSTRATRGTSA*
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mRNA from alignment at P-fluviatile_contig16:1697722..1699163+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig16.2767.1 ID=mRNA_P-fluviatile_contig16.2767.1|Name=mRNA_P-fluviatile_contig16.2767.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1442bp|location=Sequence derived from alignment at P-fluviatile_contig16:1697722..1699163+ (Porterinema fluviatile SAG_2381)
CACACGATCTCGCATATCGACTAACCCACTTTCTTCGCCGTCCAAGCGCC
TGATTGAACGCAGTTTAAAAACTCAATTGTACTTTCGTAGGCCACCACAA
TCCTTTGCTGTACGGACCACAGGCAACTTTTTTTCACCCGGCCTTTTCCC
AGACCTTACTCAGCAGCAATCAAAACAAAAATGCCAAGAGGGCGTGAGAG
GGATTCAAGCATACTTGTTTCCCGCCGCACTCGCAAGTGCACCCCCACCT
CGTCATTGATTTGCCCTTTGTCCACAGGGGCGCTACCAATCCTGGGTTCT
TTCGTTTGTTCGCAACAAGGATGTATCAAGTGTGGAACACACTTCCATAT
TCGGTATCATGACACTGCACCAGACCTACCGAAGGCCCACGCAGACAGTA
GTGCTTGGCGGTGTGCCGGGGCCAGCCCTTCTATGACTCTCACAAACCCC
GGAGGGAAAGCAAAGTTTTCACAAACGCTTCTACGGTCACGTCCCGCTCC
TTTTCCTCCGTCCTCATGCCCGGCAGGATCAGCACGGACATCATCAGCGC
GACGGGAAGATTCATCTCCACCTAGTCCTGGAGCTGCTATTGCTGAGTGT
GGCTCTGCTGCCCCCGGAGACATCCTTCCACACGAGGTGCTTTGGCCTTC
GGACGCCGCAGGTGACGCCTCGGACGCAAAGAACGCCGTCGCCGATCTCA
CGAGCGCGGCGATGCCGCGCATGGCCGCCAACAGCCGTGGATCATCCGCA
ATATTTGCCGTCTTTGGTCGTGGGTCGGAGGCTCTGCGGCCGTCCCTCCC
AGTGTTCGTTGCCGCCGCCGGCGTATTTTCGTCCGCGGCGTCGTCGTCGT
CCCAATCGTCCCACTCACTGGCAGCTTCGCCACCGCCGCTATCACTGCTC
GCCTCGCATTCGCAGCTCAGAGGGATTCCGGGCAGTGCACCGCCTTCCTC
CAGGTGCTTCCGAAACTCCGGCTCTTCGTTTTTTTGCATGCCCGATGCCG
CTACCACGTGCTCCGGGTGCCAGCGCACAAGATGCTCGGCGGCTGCCCGA
AGGAGCGAGGCGACCTTCACTTCCCAGCTGTTCGCGGACTTACGGATTTT
GGCTTTGGTCTCATCAGCCGCCTCTCCGACCGTCGCAGGCGAGGGGCTTT
TGCAGAGCTCTATCCGGGGGATGGCGAGGCCAGTGCCTTCTTCCACCAGA
GCTACGAGGGGAACTAGCGCATGATCGACGACGTCAGCTGCGAGGGTGCA
TGCCTGTGGGAACAGGTTGTTAGTCCCTCCGCCTTTCGTACCGCCCGTCC
CCAAGAATATCGCCAAGGTGTCCACCAACATGCTCGCAACGGTCTCTTCA
GTCTCATCTCCTTCCCTTTCATCATCTTCCTCGGCATCCTGTGCCGACCC
TGTCCTATGCTGTACCGCCTCCACTTTCTCACACCCCCTCCT
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Coding sequence (CDS) from alignment at P-fluviatile_contig16:1697722..1699163+

>mRNA_P-fluviatile_contig16.2767.1 ID=mRNA_P-fluviatile_contig16.2767.1|Name=mRNA_P-fluviatile_contig16.2767.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2088bp|location=Sequence derived from alignment at P-fluviatile_contig16:1697722..1699163+ (Porterinema fluviatile SAG_2381)
ATGCCAAGAGGGCGTGAGAGGGATTCAAGCATACTTGTTTCCCGCCGCAC
TCGCAAGTGCACCCCCACCTCGTCATTGATTTGCCCTTTGTCCACAGGGG
CGCTACCAATCCTGGGTTCTTTCGTTTGTTCGCAACAAGGATGTATCAAG
TGTGGAACACACTTCCATATTCGGTATCATGACACTGCACCAGACCTACC
GAAGGCCCACGCAGACAGTAGTGCTTGGCGGTGTGCCGGGGCCAGCCCTT
CTATGACTCTCACAAACCCCGGAGGGAAAGCAAAGTTTTCACAAACGCTT
CTACGGTCACGTCCCGCTCCTTTTCCTCCGTCCTCATGCCCGGCAGGATC
AGCACGGACATCATCAGCGCGACGGGAAGATTCATCTCCACCTAGTCCTG
GAGCTGCTATTGCTGAGTGTGGCTCTGCTGCCCCCGGAGACATCCTTCCA
CACGAGGTGCTTTGGCCTTCGGACGCCGCAGGTGACGCCTCGGACGCAAA
GAACGCCGTCGCCGATCTCACGAGCGCGGCGATGCCGCGCATGGCCGCCA
ACAGCCGTGGATCATCCGCAATATTTGCCGTCTTTGGTCGTGGGTCGGAG
GCTCTGCGGCCGTCCCTCCCAGTGTTCGTTGCCGCCGCCGGCGTATTTTC
GTCCGCGGCGTCGTCGTCGTCCCAATCGTCCCACTCACTGGCAGCTTCGC
CACCGCCGCTATCACTGCTCGCCTCGCATTCGCAGCTCAGAGGGATTCCG
GGCAGTGCACCGCCTTCCTCCAGGTGCTTCCGAAACTCCGGCTCTTCGTT
TTTTTGCATGCCCGATGCCGCTACCACGTGCTCCGGGTGCCAGCGCACAA
GATGCTCGGCGGCTGCCCGAAGGAGCGAGGCGACCTTCACTTCCCAGCTG
TTCGCGGACTTACGGATTTTGGCTTTGGTCTCATCAGCCGCCTCTCCGAC
CGTCGCAGGCGAGGGGCTTTTGCAGAGCTCTATCCGGGGGATGGCGAGGC
CAGTGCCTTCTTCCACCAGAGCTACGAGGGGAACTAGCGCATGAATGCCA
AGAGGGCGTGAGAGGGATTCAAGCATACTTGTTTCCCGCCGCACTCGCAA
GTGCACCCCCACCTCGTCATTGATTTGCCCTTTGTCCACAGGGGCGCTAC
CAATCCTGGGTTCTTTCGTTTGTTCGCAACAAGGATGTATCAAGTGTGGA
ACACACTTCCATATTCGGTATCATGACACTGCACCAGACCTACCGAAGGC
CCACGCAGACAGTAGTGCTTGGCGGTGTGCCGGGGCCAGCCCTTCTATGA
CTCTCACAAACCCCGGAGGGAAAGCAAAGTTTTCACAAACGCTTCTACGG
TCACGTCCCGCTCCTTTTCCTCCGTCCTCATGCCCGGCAGGATCAGCACG
GACATCATCAGCGCGACGGGAAGATTCATCTCCACCTAGTCCTGGAGCTG
CTATTGCTGAGTGTGGCTCTGCTGCCCCCGGAGACATCCTTCCACACGAG
GTGCTTTGGCCTTCGGACGCCGCAGGTGACGCCTCGGACGCAAAGAACGC
CGTCGCCGATCTCACGAGCGCGGCGATGCCGCGCATGGCCGCCAACAGCC
GTGGATCATCCGCAATATTTGCCGTCTTTGGTCGTGGGTCGGAGGCTCTG
CGGCCGTCCCTCCCAGTGTTCGTTGCCGCCGCCGGCGTATTTTCGTCCGC
GGCGTCGTCGTCGTCCCAATCGTCCCACTCACTGGCAGCTTCGCCACCGC
CGCTATCACTGCTCGCCTCGCATTCGCAGCTCAGAGGGATTCCGGGCAGT
GCACCGCCTTCCTCCAGGTGCTTCCGAAACTCCGGCTCTTCGTTTTTTTG
CATGCCCGATGCCGCTACCACGTGCTCCGGGTGCCAGCGCACAAGATGCT
CGGCGGCTGCCCGAAGGAGCGAGGCGACCTTCACTTCCCAGCTGTTCGCG
GACTTACGGATTTTGGCTTTGGTCTCATCAGCCGCCTCTCCGACCGTCGC
AGGCGAGGGGCTTTTGCAGAGCTCTATCCGGGGGATGGCGAGGCCAGTGC
CTTCTTCCACCAGAGCTACGAGGGGAACTAGCGCATGA
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