mRNA_P-fluviatile_contig16.2766.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig16.2766.1 vs. uniprot
Match: A0A6H5L882_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L882_9PHAE) HSP 1 Score: 336 bits (861), Expect = 5.660e-98 Identity = 239/434 (55.07%), Postives = 255/434 (58.76%), Query Frame = 3
Query: 39 MWQAAGDAARAVGRFARRHRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQSLARTRGECLAALANFLPALRKRLFLAVDVIGPVRELKALRHGAGAKGAAD---------GGLXXXXXXXXXXXXXXXXXSDGADSSAEVTAAAAVDLQSREVELWEKVKVTALTRLVVSLYAFSALALMLHMQLHILGRLSLEESRELLQRADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGLALSMEARHALLSATYEHVLGDGLRALVRDVERAVLRCTSSWKAHTRQQVEFQDLVAVIRRVRREIEGPIGGTDFYDSRNLFGGXXXXXXREGLGRPSGVRHALLLRYIINPSDGAAAVAAAAANATVRPAPANGGTLD 1313
MW+AAGDAARA GRFARRHRRA RRQ ++RTRGEC+AALANFLPALRKRLFLAVDV GPVRELKALR G A G XXXXXXXXXXXXXXX +DG+ AA A DLQSREVELWE+VKVTALTRLVVSLYAF+ALALMLHMQLHILGRLSLEES+ELL R TAGLALSME RH+LLSATYEHVLGDGLR LVRDVERAV RCT SWKAHTRQQVEFQDLVAVIRRVRRE+EGPIGG+ +Y F G EGLGR SG+RHALLLRYIINPSDG +AAAA T PAP N TL+
Sbjct: 1 MWKAAGDAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRALREAEDEHAAMLVQAGRDARRRQCMSRTRGECVAALANFLPALRKRLFLAVDVTGPVRELKALRTGMTGATAXXXXXXXXXXGGXXXXXXXXXXXXXXXXXAVADGS------AAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHILGRLSLEESQELLLRTS-------------NDDDITPGSSTETAASLPHGNPGTMSSPSPLTTTTRNGVPAPPAAVRLGAGASDWSGGAVTAGLALSMEGRHSLLSATYEHVLGDGLRTLVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYGGGGDFNGVGGAVG-EGLGRSSGIRHALLLRYIINPSDGIGGIAAAAT--TAAPAPTNDTTLE 412
BLAST of mRNA_P-fluviatile_contig16.2766.1 vs. uniprot
Match: D7FTT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT5_ECTSI) HSP 1 Score: 174 bits (441), Expect = 2.110e-43 Identity = 100/135 (74.07%), Postives = 107/135 (79.26%), Query Frame = 3
Query: 909 MEARHALLSATYEHVLGDGLRALVRDVERAVLRCTSSWKAHTRQQVEFQDLVAVIRRVRREIEGPIGGTDFYDSRNLFGGXXXXXXREGLGRPSGVRHALLLRYIINPSDGAAAVAAAAANATVRPAPANGGTLD 1313
MEARH+LLS+TYEHVLG GLRALVRDVERAV RCT SWKAHTRQQVEFQDLVAVIRRVRRE+EGPIGG+ +Y XXX EGLGR SGVRHALLLRYIINPSDG +AAAA T PAP N TL+
Sbjct: 1 MEARHSLLSSTYEHVLGGGLRALVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYGGXXXXXXXXXAVG-EGLGRSSGVRHALLLRYIINPSDGIGGMAAAAT--TTAPAPTNDTTLE 132
BLAST of mRNA_P-fluviatile_contig16.2766.1 vs. uniprot
Match: D7FTT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT6_ECTSI) HSP 1 Score: 164 bits (415), Expect = 1.280e-42 Identity = 126/196 (64.29%), Postives = 133/196 (67.86%), Query Frame = 3
Query: 39 MWQAAGDAARAVGRFARRHRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQSLARTRGECLAALANFLPALRKRLFLAVDVIGPVRELKALRHG-AGAKGAADGGLXXXXXXXXXXXXXXXXXSDGADSSAEVTAAA-AVDLQSREVELWEKVKVTALTRLVVSLYAFSALALMLHMQLHIL 620
MWQAAGDAARA GRFARRHRRA RRQ ++RTRGEC+AALANFLPALRKRLFLAVDV GPVRELKALR G AGA XXXXXXXXXXXXXXXXX A+ +AAA A DLQSREVELWE+VKVTALTRLVVSLYAF+ALALMLHMQLHIL
Sbjct: 1 MWQAAGDAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRALKEAEDEHAAMLVQAGHDARRRQCMSRTRGECVAALANFLPALRKRLFLAVDVTGPVRELKALRTGLAGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADGSAAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHIL 196
BLAST of mRNA_P-fluviatile_contig16.2766.1 vs. uniprot
Match: A0A835Z151_9STRA (Peroxin-3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z151_9STRA) HSP 1 Score: 142 bits (357), Expect = 4.980e-32 Identity = 122/337 (36.20%), Postives = 153/337 (45.40%), Query Frame = 3
Query: 228 RQSLARTRGECLAALANFLPALRKRLFLAVDVIGPVRELKALRHGAGAKGAADGGLXXXXXXXXXXXXXXXXXSDGADSSAEVTAAAAVDLQSREVELWEKVKVTALTRLVVSLYAFSALALMLHMQLHILGRLSLEESRELLQRADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGLALSMEARHALLSATYEHVLGDGLRALVRDVERAVLRCTSSWKAHTRQQVEFQDLVAVIRRVRREIEGPIGGTDFYDSRNLFGGXXXXXXREGLGRPSGVRHALLLRYIINPSD 1238
R L R R EC A+ NFLP LR RL+ D+ PVR LKALR A +A G D A +E A E ELW++VKVT+ TRL++S+YAFSAL LML +Q+HILGR S EE+ ELL+R XXXXXXXXXX G +L M+AR A LS+TYE +LGDGLRAL DVE AV C++ W ++ V +++L ++RRVR E+EG +GG G + LL RYIINP D
Sbjct: 64 RLYLGRARAECRTAILNFLPTLRSRLYATADISRPVRALKALRQSRDAAASAQG-----------------EGGDPAPPPSEEDPA--------EAELWDEVKVTSFTRLLLSMYAFSALNLMLRLQMHILGRYSYEEASELLKREAGQKQQPGTXXXXXXXXXXERG-----------------------------------------------------VGASLPMDARRAFLSSTYEFLLGDGLRALAADVEAAVRTCSADWHCQSKLAVGWEELAGMLRRVRAEVEGGVGGA-----------------AAAAGDAQAAQDPLL-RYIINPID 304 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig16.2766.1 >prot_P-fluviatile_contig16.2766.1 ID=prot_P-fluviatile_contig16.2766.1|Name=mRNA_P-fluviatile_contig16.2766.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=616bp MWQAAGDAARAVGRFARRHRRAIVVGGVVGAAACVYHSMKRALKEAEEEHback to top mRNA from alignment at P-fluviatile_contig16:1689136..1697268+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig16.2766.1 ID=mRNA_P-fluviatile_contig16.2766.1|Name=mRNA_P-fluviatile_contig16.2766.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8133bp|location=Sequence derived from alignment at P-fluviatile_contig16:1689136..1697268+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig16:1689136..1697268+ >mRNA_P-fluviatile_contig16.2766.1 ID=mRNA_P-fluviatile_contig16.2766.1|Name=mRNA_P-fluviatile_contig16.2766.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3696bp|location=Sequence derived from alignment at P-fluviatile_contig16:1689136..1697268+ (Porterinema fluviatile SAG_2381)back to top |