mRNA_P-fluviatile_contig16.2748.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig16.2748.1 vs. uniprot
Match: D8LDC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC8_ECTSI) HSP 1 Score: 838 bits (2166), Expect = 8.520e-295 Identity = 437/736 (59.38%), Postives = 547/736 (74.32%), Query Frame = 1
Query: 1 MAGLRRLRRWGCREVAMLVVSAVAILLPEAWGSVFDTPREDLDQTDYMEYGQEVGVATAGLGIGLSILFGLIAFIXXXXXXXXXKRLHRADLAIAQAEGDNDGKGLDDMYEIEDYEDNISKHRKILWLFSLILFLGYFFCAGYAYNGAKTTDASFNSIFDGTDTLLTRMQTALCAQNGSEACANGSVGDFMLSIAAALGLRLDGVVDFISSLTAVAAPLLWVSTNLTMASGVVNDTEKAVLSINDSIANINLVLTGDSYAGEFTNGEPIDTIPASALDDIREGTDALVAASEKTQESQLEVTEQLAGNESDIVRVKYQLDNIHGNEIMGDEDIRNATLTTILDDVLLPMRDLTKDIYKVQTEDLVDVREGVDGYVALAVQAVAGLIFLPGVILFLTSFCSGVCQSSKPLYLNMCFVFMTQILFCLVAGVFLAVSKVNGDLCDHHLQLLDTNFDGANATVQGVKIVLDFPKLEKILKCDGEPGDPSTPTNNFVNILEAEQAKIIFNISDALREASKVITDNSDVLSSPKATIIDAQGELDPLNDFIDQDLIGDVDLSNTTTEIDGLLRDLPPTPFDWDNRTHQDALDQFYLANVTALSWNDNSTGEVTYRDQLEAVNYLLSIMVAGVLGVSP-FENIENPYNFQQARNLTNDTVCAADSPFQPA--ANNLDSSGGNQIYTYVGHYDDLCGNVTTYWEQTIQMEAIVQENDQTREDLEEIRNELGLVDSNINAVKNLQ 2199
MA +R G R AML + +A+ L GSVFDTP +DL+Q DY++YGQEVGVATAGLGIGLSI FGL+AF+ KRLHRADLAIA+AEGDNDGKGLDDMYEIEDYEDNISKHRKILWLFS I+FLGY FCAGYAYNGA+TTD+SF SIFDGTD LLTR Q ALCA+NGS CA+GSVGDFML I+ AL RL+GVVDFISSL+AV APLL VS NL A+GVV+ TE AV++IN+SI ++N ++TGD E +GE I I L DI++G DAL A+E T+ S LE+ EQL GNES I R+KYQLD++HGNEI+GDEDIRNATLTT+LDDVL PMRDLT DIY VQ +D+ +VRE ++ Y+ AVQAVAG+IFLPGVILFLTS CSGVCQSSK +NGDLCDHH+ L++ N N TVQ V+I++DFPK+EKIL C G+ GD T +NNFV+ILE +Q IFNIS L+EAS +ITDNS +L+ PK +++DAQ EL PL+DF++ D +GD+D+S + EID LL D+PP+P DWD+R HQD++D FYL NV+ SWN+ S+G +TYR QLE VN+L+S+MV G++GV F +I++PYNF+QARNLTN+TVCA DSPF PA + +S +IY + H+D LC NVT Y+E T ++E +++END+ R+DLE I+ E+G ++ NI + + Q
Sbjct: 1 MAPMRLRPLVGRRGAAMLCLPTLAMTLVVTKGSVFDTPADDLEQEDYIDYGQEVGVATAGLGIGLSIFFGLLAFLGMLAMCCRCKRLHRADLAIAEAEGDNDGKGLDDMYEIEDYEDNISKHRKILWLFSFIIFLGYLFCAGYAYNGAETTDSSFGSIFDGTDVLLTRAQEALCAENGSADCADGSVGDFMLEISVALIDRLEGVVDFISSLSAVTAPLLVVSANLGTATGVVDTTEMAVININNSITSVNAIITGDGPVAELMDGETIANIDGDVLHDIQDGRDALEQATELTESSSLEIAEQLTGNESAITRIKYQLDDVHGNEILGDEDIRNATLTTVLDDVLQPMRDLTVDIYDVQNDDIPEVRENIEVYLDQAVQAVAGIIFLPGVILFLTSLCSGVCQSSK----------------------------INGDLCDHHMALIEANLPEFNTTVQDVEILVDFPKVEKILTCSGDAGDTPTDSNNFVDILEIQQ---IFNISSTLKEASSLITDNSALLAEPKDSVLDAQSELGPLDDFVETDFVGDIDMSELSDEIDDLLEDMPPSPLDWDDRDHQDSVDSFYLNNVSGYSWNNASSGNITYRGQLENVNWLISLMVPGIIGVEDAFLDIKDPYNFEQARNLTNETVCATDSPFYPADGQDRYSNSENIEIYAFDDHWDQLCRNVTAYYETTKKLETLIEENDEARQDLEGIQYEMGNIEGNITVITDQQ 705
BLAST of mRNA_P-fluviatile_contig16.2748.1 vs. uniprot
Match: A0A836CLF9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLF9_9STRA) HSP 1 Score: 182 bits (461), Expect = 6.310e-44 Identity = 130/435 (29.89%), Postives = 205/435 (47.13%), Query Frame = 1
Query: 121 DLDQTDYME----YGQEVGVATAGLGIGLSILFGLIAFIXXXXXXXXXKRLHRADLAIAQAEGDNDGKGLDDMYEIEDYEDNISKHRKILWLFSLILFLGYFFCAGYAYNGAKTTDASFNSIFDGTDTLLTRMQTALCAQNGSEACANGSVGDFMLSIAAALGLRLDGVVDFISSLTAVAAPLLWVSTNLTMASGVVNDTEKAVLSINDSIANINLVLTGDSYAGEFTNGEPIDTIPASALDDIREGTDALVAASEKTQESQLEVTEQLAGNESDIVRVKYQLDNIHGNEIMGDEDIRNATLTTILDDVLLPMRDLTKDIYKVQTEDLVDVREGVDGYVALAVQAVAGLIFLPGVILFLTSFCSGVCQSSKPLYLNMCFVFMTQILFCLVAGVFLAVSKVNGDLCDHHLQLLDTNFDGANATVQGVKIVLDFPKL 1413
D + + ME YG V TAG GI L + GL+ I + L R D I + GKG D I Y ++K RK+LW+ +++L +GY CAG AY A +TD +F + +DG D +Q A+CAQ+G+ C + S+G F+ ++ A L+G F+ + +TM S N T +L+ + E G P D ++ A + + V ++D HGNE+ G D+R +T +LD L +R+ T+ IYK QT VDV + + ++ A A G++FLPG++L L +FC+ +C++ +PLYLNM FV+ Q +CL+ G+FL ++ VN DLCD H +++ F +A+V ++ P +
Sbjct: 19 DFENSTQMEQWKAYGATVSEHTAGFGIALMFVLGLLMSILAIVFCCRCRSLRRIDREIGE------GKGFHDQAAIA-YR--VTKQRKLLWVGTVMLVVGYAACAGVAYEKALSTDVAFGNAYDGADKFALDLQKAVCAQDGARECEDKSLGAFLEAVYGATTAVLNGTAAFLGT------------AGITMTS---NTTLYGMLTCTPXXXXXXXXXXXXRWQSE---GRPRDIERYASXXXXXXXXXXXXXAMQ-------------GPLGASATFVASEIDAEHGNEVDGVPDLREG-VTVVLDATLTQLRNFTRTIYKYQTGAAVDVDDAFNQWIKPAAAAAGGIVFLPGIVLVLLAFCTAMCKNPRPLYLNMAFVYKVQGFYCLLGGLFLTLAYVNSDLCDQHKEIIVEQFPKTSASVAAAAALVVLPNM 412
BLAST of mRNA_P-fluviatile_contig16.2748.1 vs. uniprot
Match: W7U7G5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U7G5_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.850e-25 Identity = 164/706 (23.23%), Postives = 291/706 (41.22%), Query Frame = 1
Query: 454 DASFNSIFDGTDTLLTRMQTALCAQNGSEA-CANGSVGDFMLSIAAALGLRLDGVVDFISSLTAVAAPLLWVSTNLTMASGVVNDTEKAVLSINDSIANINLVLTGDSYAGEFTNGEPIDTIPASALDD-IREGTDALVAASEKTQESQLEVTEQLAGNESDIVRVKYQLDNIHGN-EIMGDEDIRNA-----------TLTTILDDVLLPMRDLTKDIYKVQTEDL------VDVREGVDGYVALAVQAVAGLIFLPGVILFLTSFCSGVCQS-SKPLYLNMCFVFMTQILFCLVAGVFLAVSKVNGDLCDHHLQLLDTNFDGANATVQGVKIVLDFPKLEKILKCDGEPGDPSTPT--NNFVNILEAEQAKIIFNISDALREASKVITDNSDVLSS--PKATIIDAQGELDPLNDFIDQDLIGDVDLSNTTTEIDGLLRDLPPTPFDWDNRTHQDALDQFYLANVTALSWNDNSTGEVTYRDQLEAVNYLLSIMVAGVLGVSPF-ENIENPYNFQQARNLTNDTVCAADSPFQPAANNLDSSGGNQIYTYVGHYDDLCGNVTTYWEQTIQMEAIVQENDQTREDLEEIRNELGLVDSNINAVKNLQVLMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVMGASNYTKCGYIGDFYQDVYLDAMCTDLQGNIDAVAAPALVVVVLMFISFCVQGCY 2493
DAS + + L+ ALC + S C S GDF+ + L +VD + SL P L +G+++D + A + D I+L++ S E+ D + A++ DD + T AL K E +L ++S I+ + +++ G + D+ +A T T +L + P++++ + + + ++ L + E ++ Y+A AV+ + LP V+ + + + Q S L NMC ++ ++F L+A +F ++ V+G +C++HL LL N T+ V++ +E IL C P P+ T NNF+++L E+ IF+I+ + ++I + +S A I + +L L +F D ++ + EID LL DLPP D D+ + +L +YL N + SW+ +Y++ LE +N +L+ +P + + Y FQ N T TV A DS+ + + +Y+ L + T + + N Q +L IR L + SNI + Q + A +YTKCG++G+FY++ + C +L N+ LV L+F+SF C+
Sbjct: 168 DASARILMGDVENLVLDSANALCTSDASSRFCTPQSAGDFVRTAETRASGMLTNLVDLLQSLGEELYPPL---------NGMIDDLDMAEADLEDIKVYISLIMGNRSRIQEYN-----DWLFATSPDDEVTPLTAALPKG--KLPNVTAEQLTKLDDHQSVIIMTRNTSEDVFGKIQNFMQTDVPDAVTRFNTSAPPGTSTQLL---MKPLQNVFEKLLRARSLMLRYYALVYEQGERIEDYLAPKTLAVSVIFLLPFVLQIVFTILNRSNQKCSGHLLTNMCCSYLCSVVFLLLAIIFSLLAVVSGTVCEYHLTLL-AKVPVQNVTINDVQLSFTPAVIEDILNCPSYPTAPAGATSGNNFISLLGGEK---IFDITS---QTDEIIAQVEEARTSFTLNAQIQQSIYQLSILENFTALDFANSSEILSYRLEIDALLEDLPPATMDRDDEVQRASLTAYYLTNGS-FSWD-------SYQESLEEINAILA-------EAAPIPDGFFSSYTFQTVWNFTQATVEA------------DSAWMDVTFVRPKNYEALIAGLVQMDPFTGAVNTAAKTNIQVHANLSAIRYALRDIQSNIQEIDAAQSNLRTAQTQLDGMFSDLLDRLNGIARNLSLQEEGIRGLASFADSAPDYTKCGFVGNFYREGFQKNFCGNLHNNLSISWPFMLVAASLLFLSFITFSCF 820
BLAST of mRNA_P-fluviatile_contig16.2748.1 vs. uniprot
Match: D8LDC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC9_ECTSI) HSP 1 Score: 104 bits (259), Expect = 1.620e-23 Identity = 47/57 (82.46%), Postives = 51/57 (89.47%), Query Frame = 1
Query: 2461 MFISFCVQGCYGPSMRKRPRGTAGDFDGDKARLNASGEQFNLPTPHSPTPLVGNSGF 2631
MF+SFC+QGCYGPSMRKRPRG AGDFDG KARLN + + NLPTPHSPTPLVGNSGF
Sbjct: 1 MFLSFCIQGCYGPSMRKRPRGPAGDFDGGKARLNDTADN-NLPTPHSPTPLVGNSGF 56
BLAST of mRNA_P-fluviatile_contig16.2748.1 vs. uniprot
Match: A0A835ZAU7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAU7_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.610e-11 Identity = 71/277 (25.63%), Postives = 111/277 (40.07%), Query Frame = 1
Query: 61 SAVAILLPEAWGSVFDTPRE----DLDQTDYMEYGQEVGVATAGLGIGLSILFGLIAFIXXXXXXXXXKRLHRADLAIAQAEGDNDGKGLDDMYEIEDYEDNISKH--------------------------------------------------------RKILWLFSLILFLGYFFCAGYAYNGAKTTDASFNSIFDGTDTLLTRMQTALCAQNGSEACANGSVGDFMLSIAAALGLRLDGVVDFISSLTAVAAPLLWVSTNLTMASGVVNDTE 711
+A A+LL +A + F + L + YG E+ ATAG+G+G++ILFG+I I R+ R D A+A+ D D Y + D KH R+ LW +L L + Y C +Y+ A+ T + + +DGT LT +Q ALC+ CA+GSVGD++L++ + V +I L+ V AP + M +GV++DT+
Sbjct: 12 AACALLLLQAVEAGFPADVKLQTLKLQDPEVKSYGIEIVKATAGVGVGVAILFGIIMTICCLVSCVRCCRMGRRDRAVAEGSFLGDKAFPDADYAYHNIGDQARKHNWSTAVACTALSRRRIHPTATYLHCNLKSRPLRPHYEQQPLTAARARIRYARPARCRRYLWGATLALIIAYVACGAASYSAARKTLNTVDDAYDGTSAFLTDVQLALCSTGSDAKCADGSVGDYVLAVQTTMVGTFAAAVAWIDQLSGVQAPF----DAMAMQTGVMSDTQ 284
BLAST of mRNA_P-fluviatile_contig16.2748.1 vs. uniprot
Match: A0A835ZCZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCZ2_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.390e-9 Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 2320 VVMGASNYTKCGYIGDFYQDVYLDAMCTDLQGNIDAVAAPALVVVVLMFISFCVQGCYGPSMRKRP 2517
V M A Y+ CG+IGDFYQ VYL A+C QGN+ +A P L V LM ++F + P+MR RP
Sbjct: 81 VFMKADAYSMCGFIGDFYQSVYLGAVCEGFQGNLRDIAVPILFVACLMLVAFVLYAWLAPAMRARP 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig16.2748.1 >prot_P-fluviatile_contig16.2748.1 ID=prot_P-fluviatile_contig16.2748.1|Name=mRNA_P-fluviatile_contig16.2748.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=878bp MAGLRRLRRWGCREVAMLVVSAVAILLPEAWGSVFDTPREDLDQTDYMEYback to top mRNA from alignment at P-fluviatile_contig16:1436046..1454516+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig16.2748.1 ID=mRNA_P-fluviatile_contig16.2748.1|Name=mRNA_P-fluviatile_contig16.2748.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=18471bp|location=Sequence derived from alignment at P-fluviatile_contig16:1436046..1454516+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig16:1436046..1454516+ >mRNA_P-fluviatile_contig16.2748.1 ID=mRNA_P-fluviatile_contig16.2748.1|Name=mRNA_P-fluviatile_contig16.2748.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5268bp|location=Sequence derived from alignment at P-fluviatile_contig16:1436046..1454516+ (Porterinema fluviatile SAG_2381)back to top |