mRNA_P-fluviatile_contig16.2741.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig16.2741.1 vs. uniprot
Match: A0A6H5JKQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ9_9PHAE) HSP 1 Score: 379 bits (973), Expect = 4.890e-119 Identity = 213/332 (64.16%), Postives = 234/332 (70.48%), Query Frame = 1
Query: 703 DGAGRYARGLHVQGTFWSLEKRNPEDLEGLEQEYEKLLRNFRGVLPAAWFEPPRKPGGRQGGAEVGGAGNPLSAGEDVAGRRGEAC-------LGRRLAARALELDVAVHANGDACLSASGRGXXXXXRRGRTLVHGDLKTWNVFFRKGGGWWGTGPTAGAARHG-----AAVAAAPAEGRVKFIDWQWCGEALAAADVAYVMCTSLEPAVLSRERELLDHYHAELSRGLEARFGVPPLPSLSVGKRGGASSGSSHGTAWYPAEQFEDDFRVAFLDYMRCVVGTLWKGLTPEKMEVNRRSGPGLSLINRSSQHMQWMIQRATRLLDELDGVS 1662
DG RYARGLH QGTFWSLEKR+ DL GLE+EY KL+RNFR +LPAAWFE P+ QGG VG A RR E C LGRRLAARAL LD AVHANGD L++SG G +RGR+LVHGDLKTWNVFF+ G G GAA G A AA A VK IDWQWCGE LAAAD AYV+CTSLEP++LSRERELLDHYHAELSRGLEARFG PP P + GG S G AWYP+ QF DD+RVAFLDYMRCVV TLWKGLTPEKM+ NR SGPG+SLINRS +HMQWMI+RATRLLDELD +
Sbjct: 289 DGEWRYARGLHKQGTFWSLEKRDAGDLAGLEEEYRKLMRNFRPLLPAAWFEAPQ-----QGGDAVGDA-----------ARRPELCAEGDERHLGRRLAARALSLDAAVHANGDGVLASSGGG-----KRGRSLVHGDLKTWNVFFKTAGWAEPGGQGEGAAARGDGGGDAKGPAAAARRNVKIIDWQWCGEGLAAADAAYVICTSLEPSLLSRERELLDHYHAELSRGLEARFGKPPAP-----EGGGDSDG-----AWYPSGQFADDYRVAFLDYMRCVVSTLWKGLTPEKMDRNRSSGPGMSLINRSPRHMQWMIERATRLLDELDSLE 589
BLAST of mRNA_P-fluviatile_contig16.2741.1 vs. uniprot
Match: D8LDB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB8_ECTSI) HSP 1 Score: 373 bits (958), Expect = 2.250e-118 Identity = 215/341 (63.05%), Postives = 238/341 (69.79%), Query Frame = 1
Query: 703 DGAGRYARGLHVQGTFWSLEKRNPEDLEGLEQEYEKLLRNFRGVLPAAWFEPPRKPGGRQGGAEVGGAGNP--LSAGEDVAGRRGEACLGRRLAARALELDVAVHANGDACLSASGRGXXXXXRRGRTLVHGDLKTWNVFFRKGGGWWGTGPTA--GAARHGAAV----AAAPAEGRVKFIDWQ-------------WCGEALAAADVAYVMCTSLEPAVLSRERELLDHYHAELSRGLEARFGVPPLPSLSVGKRGGASSGSSHGTAWYPAEQFEDDFRVAFLDYMRCVVGTLWKGLTPEKMEVNRRSGPGLSLINRSSQHMQWMIQRATRLLDELDGVS 1662
DG GRYARGLH QGTFWSLEKR+ DL GLE+EY+KLL NFR +LPAAWFE P QGG VG A + AG D E LGRRLAARAL LD AVHANGD L++SG G +RGR+LVHGDLKTWNVFF K GGW G AAR G V AA A G+VK IDWQ WCGE LAA D AYV+CTSLEP++LSRERELLDHYHAELSRGLEARFG P P + GG S G AWYP+ QF DD+RVAFLDYMRCVV TLWKGLTPEKM+ NR SGPG+SLINRS++HMQWMI++ATRLLDELD +
Sbjct: 158 DGGGRYARGLHKQGTFWSLEKRDAGDLAGLEEEYQKLLGNFRPLLPAAWFESPH-----QGGDAVGDAARHPGVCAGAD------ERHLGRRLAARALSLDAAVHANGDGVLASSGGG-----KRGRSLVHGDLKTWNVFF-KTGGWAEAGEQGEGAAARDGGGVDAQGPAAAAGGKVKIIDWQVWFVLEVGVVTNEWCGEGLAATDAAYVICTSLEPSLLSRERELLDHYHAELSRGLEARFGKPSAP-----EGGGGSDG-----AWYPSGQFADDYRVAFLDYMRCVVSTLWKGLTPEKMDRNRSSGPGMSLINRSARHMQWMIEKATRLLDELDSLE 471
BLAST of mRNA_P-fluviatile_contig16.2741.1 vs. uniprot
Match: D8LDB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB7_ECTSI) HSP 1 Score: 102 bits (255), Expect = 1.500e-22 Identity = 65/112 (58.04%), Postives = 73/112 (65.18%), Query Frame = 3
Query: 72 MACKELAPRSLIKWRTSIASYRAEATFFEDVAGT--LGSIVPHVFWVHVDDRLGDGE-TGWVDAAAPTAEGNGVDGHPQGGQEVENKKXXXXXEVEALRESCFMMIT-EDLG 395
M C+EL RSL KWRTSIASYRAEATFF+ VAG+ L +IVPH FWV+VDDRLG GE TG AAA T G + V VEALRESCFMMIT ++LG
Sbjct: 1 MTCRELPARSLTKWRTSIASYRAEATFFKTVAGSAALDAIVPHAFWVYVDDRLGGGEETGTAAAAAGT-------GDTEADAAV----------VEALRESCFMMITGQELG 95
BLAST of mRNA_P-fluviatile_contig16.2741.1 vs. uniprot
Match: A0A7R9XU18_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9XU18_MICPS) HSP 1 Score: 87.0 bits (214), Expect = 5.320e-14 Identity = 67/204 (32.84%), Postives = 91/204 (44.61%), Query Frame = 1
Query: 1066 RRG-RTLVHGDLKTWNVFFRKGGGWWGTGPTAGAARHGAAVAAAPAEGRVKFIDWQWCGEALAAADVAYVMCTSLEPAVLSRERELLDHYHAELSRGLEARFGVPPLPSLSVGKRGGASSGSSHGTAWYPAEQFEDDFRVAFLDYMRCVVGTLWKGLTPEKMEVNRRSGPGLSLINRSSQHMQWMIQRATRLLDELDGVSGVDE 1674
RRG +TLVHGDLK NV F P A P V IDWQW G A D+ Y + TSL L+R EL++ YHAEL+R L AR G A + + A +D V DY+R G+++ LTPE+M N + RS H+ W++++A R LD ++ + E
Sbjct: 193 RRGAQTLVHGDLKAANVIF----------PIHAVDASDPAAEGDPDPDPV-VIDWQWVGPGAVAHDLLYFLATSLSMDALTRVDELVEAYHAELTRRLRAR-----------GHHAAADA--------FTATDLREDLDVHAADYLRYCAGSVFGELTPERMAHNAPK-QNYGIARRSMPHLTWLVRKAARALDAMESRAKAAE 365
BLAST of mRNA_P-fluviatile_contig16.2741.1 vs. uniprot
Match: A0A5J4XP26_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XP26_9CHLO) HSP 1 Score: 73.9 bits (180), Expect = 1.200e-10 Identity = 54/160 (33.75%), Postives = 79/160 (49.38%), Query Frame = 1
Query: 1075 RTLVHGDLKTWNVFFRKGGGWWGTGPTAGAARHGAAVAAAPAEG----RVKFIDWQWCGEALAAADVAYVMCTSLEPAVL-SRERELLDHYHAELSRGLEARFGVPPLPSLSVGKRGGASSGSSHGTAWYPAEQFEDDFRVAFLDYMRCVVGTLWKGLTP 1539
RT++HGD KT N+FF PTA AA A+AP G V D+QWCG L DV Y++ TS++P VL +E ELL Y++ L L+ + + GS Y +Q +++A+LDY+R ++G +W +TP
Sbjct: 99 RTIIHGDFKTANLFFS---------PTAEAAS-----ASAPQHGGEPAMVSACDFQWCGGGLGVTDVMYLLWTSVQPQVLFDQEEELLRCYYSSLMHQLQEQHHI---------------DGSI-----YSFQQCGHHYQMAYLDYIRFLIGAMWGTVTP 224
BLAST of mRNA_P-fluviatile_contig16.2741.1 vs. uniprot
Match: A0A7S3C5E1_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3C5E1_9VIRI) HSP 1 Score: 72.0 bits (175), Expect = 5.480e-10 Identity = 58/195 (29.74%), Postives = 84/195 (43.08%), Query Frame = 1
Query: 1075 RTLVHGDLKTWNVFFRKGGGWWGTGPTAGAARHGAAVAAAPAEGRVKFIDWQWCGEALAAADVAYVMCTSLEPAVLS----RERELLDHYHAELSRGLEARFGVPPLPSLSVGKRGGASSGSSHGTAWYPAEQFEDDFRVAFLDYMRCVVGTLWKGL--TPEKMEVNRRSGPGLSLINRSSQHMQWMIQRATRLL 1641
+TLVHGD K+ N+FFR+G G +A + +V +ID QW G LAA DVA+ + L+ LS +E LLDHYHA L L G P + + P E + + A LD R V W + +P + N S G + N+S H W++++ +L
Sbjct: 123 KTLVHGDPKSANIFFRQGPG------------------SAADDVQVGYIDMQWSGFGLAATDVAHHIVAGLDIECLSADGCKEEALLDHYHASLVAQLVELGGFPEAQAARL----------------LPRETLQAQYEAAVLDMCRVVFAYQWARVKASPATLAKNAPS-MGRNSYNKSVDHACWLVRQCDNML 282
BLAST of mRNA_P-fluviatile_contig16.2741.1 vs. uniprot
Match: A0A7S0CGZ9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGZ9_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 5.910e-9 Identity = 70/244 (28.69%), Postives = 98/244 (40.16%), Query Frame = 1
Query: 961 LGRRLAARALELDVAVHANGDACLSAS--GRGXXXXXRRG-------RTLVHGDLKTWNVFFRKGGGWWGTGPTAGAARHGAAVAAAPAEGRVKFIDWQWCGEALAAADVAYVMCTSLEPAVLS----RERELLDHYHAELSRGLEARFGVPPLPSLSVGKRGGASSGSSHGTAWYPAEQFEDDFRVAFLDYMRCVVGTLWKG----LTPEKMEVNRRSGPGLSLINRSSQHMQWMIQRATRLL 1641
LG RL A + V H DA S + G G ++ RTL+HGD K N+FFRK G A E V ID+QW G LAA DVA+ + +++P+ LS +E+ LLD+Y+ LS L G A++ +P ++ + A LD R V W L P NR + N+S W+I R +R+L
Sbjct: 36 LGERLENVAKSVGVKAHPFFDATSSIAPQGTGTEKALKKASKKYAKFRTLIHGDPKQANIFFRKSG-----------------ENAKENELEVGLIDFQWSGFGLAATDVAHHIAAAVQPSCLSNDGSKEKNLLDYYYDCLSHSLITN--------------GVATNMKEVQDIIFPRSVLQEQYETAMLDICRIVFAYSWNRWKAELVPTSSSFNRNA------YNKSLSSALWLITRCSRIL 242
BLAST of mRNA_P-fluviatile_contig16.2741.1 vs. uniprot
Match: A0A448ZC16_9STRA (CHK domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZC16_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 3.250e-7 Identity = 72/245 (29.39%), Postives = 102/245 (41.63%), Query Frame = 1
Query: 928 EDVAGRRGEAC--LGRRLAARALELDVAVH--ANGDACLSASGRGXXXXXRRGRTLVHGDLKTWNVFFRKGGGWWGTGPTAGAARHGAAVAAAPAEGRVKFIDWQWCGEALAAADVAYVMCTSLEPAVL----SRERELLDHYHAELSRGLEARFGVPPLPSLSVGKRGGASSGSSHGTAWYPAEQFEDDFRVAFLDYMRCVVGTLWKGLT----PEKMEVNRRSGPGLSLINRSSQHMQWMIQR 1626
E VA +G C LG RL A + H A+ DA +A R RTL+HGD K N FFRK + + + V ID+QW G LAA DVA+ + +++ + L E ELLDHY++ L+R L ++GV T+ +P E + + VAFLD R V W+ P + NR + N+S + W+I R
Sbjct: 632 EKVAELKGVDCVPLGERLEEVAPIVGGKAHPFADKDAATNAD-------FARYRTLIHGDPKHANFFFRK--------------KQESGI-------EVGLIDFQWSGFGLAATDVAHHITSAVSSSALCFSGKEEGELLDHYYSCLTREL-VKYGV-------------GKDAEEIETSIFPRETLQQQYEVAFLDICRIVFAYAWRRWKAEDEPSEESFNRNA------YNKSLDSVLWLITR 828
BLAST of mRNA_P-fluviatile_contig16.2741.1 vs. uniprot
Match: A0A7S1SWD2_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SWD2_9CHLO) HSP 1 Score: 61.6 bits (148), Expect = 3.940e-7 Identity = 66/233 (28.33%), Postives = 92/233 (39.48%), Query Frame = 1
Query: 961 LGRRLAARALELDVAVHANGDACLSASGRGXXXXXRRGRTLVHGDLKTWNVFFRKGGGWWGTGPTAGAARHGAAVAAAPAEGRVKFIDWQWCGEALAAADVAYVMCTSLEPAVL----SRERELLDHYHAELSRGLEARFGVPPLPSLSVGKRGGASSGSSHGTAWYPAEQFEDDFRVAFLDYMRCVVGTLWKGL--TPEKMEVNRRSGPGLSLINRSSQHMQWMIQRATRLL 1641
G RL+A A ++ +VH G A + RT+VHGDLK+ NVF GG GT ID+QW G L A D+AY++ +S +L S E LL YH+ L L ++ G G S + A P + A +D R V W+ L +PE + N S G N+S H W++ R +L
Sbjct: 5 FGARLSAAAPKVARSVHEEGSAADNPF-----------RTVVHGDLKSANVFL-SGGEAGGT--------------------EAALIDFQWSGWGLGATDLAYLVASSAAADLLPLDGSGEPALLRSYHSHLCAAL-----------VTFGAAGSVESAA----AMCPFPTLLSQYESAVVDVCRLAVAYQWRRLNASPEVLRRNA-SSLGRCAYNKSLHHAMWLVARTDAIL 189
BLAST of mRNA_P-fluviatile_contig16.2741.1 vs. uniprot
Match: A0A1E7EU93_9STRA (Carbohydrate phosphatase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU93_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 3.480e-6 Identity = 58/198 (29.29%), Postives = 89/198 (44.95%), Query Frame = 1
Query: 1075 RTLVHGDLKTWNVFFRKGGGWWGTGPTAGAARHGAAVAAAPAEGRVKFIDWQWCGEALAAADVAYVMCTSLEPAVLS----RERELLDHYHAELSRGLEARFGVPPLPSLSVGKRGGASSGSSHGTAWYPAEQFEDDFRVAFLDYMRCVVGTLWKGLT----PEKMEVNRRSGPGLSLINRSSQHMQWMIQRATRLLD 1644
RTL+HGD K N FFR+ + + + E V ID+QW G LAA DVA+ + +++ + +S E ELLDHY++ LS+ L +FGV + ++ S +P E + + AFLD R V W+ P + NR + N+S + + W+I R LL+
Sbjct: 525 RTLIHGDPKHANFFFRQ--------------KQDSKIEEREIE--VGVIDFQWSGFGLAATDVAHHITSAVSSSAVSLDGKEESELLDHYYSCLSKAL-VKFGV------GINEKEIEES-------IFPREILQKQYETAFLDVCRIVFAYAWRRWKAEPEPTQESFNRNA------YNKSLESVLWLITRCHVLLE 686 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig16.2741.1 >prot_P-fluviatile_contig16.2741.1 ID=prot_P-fluviatile_contig16.2741.1|Name=mRNA_P-fluviatile_contig16.2741.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=330bp MEPKEDGAGRYARGLHVQGTFWSLEKRNPEDLEGLEQEYEKLLRNFRGVLback to top mRNA from alignment at P-fluviatile_contig16:1373062..1381171- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig16.2741.1 ID=mRNA_P-fluviatile_contig16.2741.1|Name=mRNA_P-fluviatile_contig16.2741.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8110bp|location=Sequence derived from alignment at P-fluviatile_contig16:1373062..1381171- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig16:1373062..1381171- >mRNA_P-fluviatile_contig16.2741.1 ID=mRNA_P-fluviatile_contig16.2741.1|Name=mRNA_P-fluviatile_contig16.2741.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1980bp|location=Sequence derived from alignment at P-fluviatile_contig16:1373062..1381171- (Porterinema fluviatile SAG_2381)back to top |