mRNA_P-fluviatile_contig16.2709.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig16.2709.1
Unique NamemRNA_P-fluviatile_contig16.2709.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig16.2709.1 vs. uniprot
Match: D8LDA3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDA3_ECTSI)

HSP 1 Score: 587 bits (1512), Expect = 9.520e-207
Identity = 306/435 (70.34%), Postives = 342/435 (78.62%), Query Frame = 1
Query:    1 LMATNPRELERFVDNTYCRQGGDHFHHADDGSRVAALTSTATPISWDGLALDPRPFARLDEHDTFTFGKKPAGSAGARVIELEGHAPGGIFGRPATQPGHIQWTVEQETSRVLATDNPYKQAAADGRGVSVERPYFDAALAVAPKVQAVRPPTSIPRGGPQGDQALLAPEERREMNDYEAKMQAAERVGRKARHQKTRLDYIMKHRYPEGAIGVDSPYNLASEVHAEKRITRETREAASSAHAAARRQRLDEIRGNPRLRFGFDPWQHPDLPASGGIQHGVHGGVAGGDRGWDAAKPVGGNGGERFLQTKVRMGLGPA-GPTTLPAGRRV-DHAERERGSGGLDLHGAHGSGAYVPSETFKNILGMRERVPKSDPAFRAQVLWDEACGRRSYNIVSGAQLPLPTVKAERPPGRLAHPSQQSLERGRNLQASLIPA 1299
            L ATNPRELERFVD++   + G         SR+ A TSTAT ISWDGL LDPRPFAR DEH+T T GKKPAGSAGARV+ LEGHAPGGIFGRP T PG +QWTVEQETSRV+A DNP+++A   G GV+VERP+FD+ALAV PKVQAVRPPT + R GPQGD+ALLAPEERRE+NDY+ KMQ AERVGRKARHQKTRLD+I+KHRYPEGAIGVDSP N  SEVHAE R+TRE +EAASSAHA+ARR RLD+IRG+PR RFG+DPWQHPDLPA GGIQ GV GGV     GW A K VGGNGGE FLQTK R G   A G    PAG R+ D+  R +    +          +  SETF NILGMR+++PKSDP  RAQ LWDE CGRRSYNIV+G QLPLP+VKAERPPGRLAHPSQQSLERGRNLQASLI A
Sbjct:   35 LRATNPRELERFVDSS---RDGIECVGVGRESRLTARTSTATSISWDGLTLDPRPFARFDEHNTLTTGKKPAGSAGARVMVLEGHAPGGIFGRPVTGPGRMQWTVEQETSRVMAPDNPFRRATVCGGGVNVERPFFDSALAVVPKVQAVRPPTCLSRAGPQGDRALLAPEERREINDYDTKMQNAERVGRKARHQKTRLDFILKHRYPEGAIGVDSPSNPTSEVHAETRLTREKKEAASSAHASARRHRLDDIRGDPRPRFGYDPWQHPDLPAGGGIQQGVFGGVTAEGGGWGAIKQVGGNGGEHFLQTKTRKGSRQACGADVPPAGSRIGDNMTRGQQPSAM---------GHARSETFINILGMRQKIPKSDPRVRAQALWDEGCGRRSYNIVTGVQLPLPSVKAERPPGRLAHPSQQSLERGRNLQASLIAA 457          
BLAST of mRNA_P-fluviatile_contig16.2709.1 vs. uniprot
Match: A0A6S9K570_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K570_HETAK)

HSP 1 Score: 163 bits (413), Expect = 1.260e-42
Identity = 141/438 (32.19%), Postives = 200/438 (45.66%), Query Frame = 1
Query:    7 ATNPRELERFVDNTYCRQGGDHFHHADDGSRVAALTSTATPISWDGLALDPRPFARLDEHDTFTFGK-KPAGSAGARVIELEGHAPGGIFGR-PATQPGHIQWTVEQETSRVLATDNPYKQAAADGR----GVSVERPYFDAALAV-APKVQAVRPPTSIPRGGPQGDQALLAPEERREMNDYEAKMQAAERVGRKARHQKTRLDYIMKHRYPEGAIGVDSPYNLASEVHAEKRITRETREAASSAHAAARRQRLDEIRGNPRLRFGFDPWQHPD---LPASGGIQHGVHGGVAGGDRGWDAAKPVGGNGGERFLQTKVRMGLGPAGPTTLPAGRRVDHAERERGSGGLDLHGAHGSGAYVPSETFKNILGMRERVPKSDPAFRAQVLWDEACGRRSYNIVSGAQLP-LPTVKAERPPGRLAHPSQQSLERGRNLQAS 1287
            A +P  L +F DN +  + G     ++  S+V          SWDGL+++P+PFAR DE +T      +P+G AG RVIELEGH   GIFG  P  +P  +  TVEQ      A D     AAAD       V+ + P F     V  P  QAV PP  + + GP  D  LL P ERRE+  YE + +A   + +KA   + RL  +M+ R+P+G +GVD   N  S+V+ ++      +EA + +H A RR  L+ + G    R G+DP+ H +    PA+ G  H                         RFLQ K   G  PA          VD  +R  G                     ++  G   R        R Q + ++  G ++++I++G+ +   P    ER    LAHPSQQSLERGRN Q +
Sbjct:   10 AVDPLRLTKFFDNDFMTKSGS-LKRSNGKSQVYRPED-----SWDGLSVNPKPFARFDETNTVAHAPTRPSGMAGPRVIELEGHGMDGIFGHNPKGRP--VPRTVEQIVVGHRAADGGAVGAAADPSRAEVAVAADSPRFLGTRGVQVPMAQAVAPPAVLAKAGPNWDATLLTPAERRELLQYEKRARAGAALAKKAAGDERRLVQLMRARHPQGVLGVDGAANPDSQVYRDRYEEATQKEARAQSHMARRRAELERV-GRADRRVGYDPFAHSEQWEAPAAAGPAH-------------------------RFLQAK---GARPAA---------VDTHDRVFG---------------------QSTAGANPR--------RTQNIRNQDLGGKAFDIINGSAIVHAPPTNNERVHRHLAHPSQQSLERGRNQQGA 372          
BLAST of mRNA_P-fluviatile_contig16.2709.1 vs. uniprot
Match: A0A835YYF5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF5_9STRA)

HSP 1 Score: 126 bits (317), Expect = 5.030e-30
Identity = 107/293 (36.52%), Postives = 138/293 (47.10%), Query Frame = 1
Query:  430 PKVQAVRPPTSIPRGGPQGDQALLAPEERREMNDYEAKMQAAERVGRKARHQKTRLDYIMKHRYPEGAIGVDSPYNLASEVHAEKRITRETREAASSAHAAARRQRLDEIRGNPRLRFGFDPWQHPDLPASGGIQHGVHGGVAGGDRGWDAAKPVGGNGGERFLQTKVRMGLGPAGPTTLPAGRRVDHAERERGSGGLDLHGAHGSGAYVPSETFKNILGMRERVPKSDPAFRAQVLWDEACGRRSYNIVSGAQLP---LPTVKAERPPGRLAHPSQQSLERGRNLQASLIPA 1299
            P V+A+ PP      G Q D  LLAP  RR +NDY+A+ Q AE + R+A  Q+ RL +++  R+P GA+ VDS  N  + V+A     R   E   +AHA  RR+RLDE+ G P LRFGFDP      PA+   QH      +  +R  +         G    Q K R     +      A     H   ER      L    G     P              P+   A RAQ L D A G ++Y+IV+ A LP    P+V  ER    LAHPSQ SLERGRN Q +L+ A
Sbjct:    5 PPVRALPPPPDRAAAGAQCDACLLAPRARRAINDYDARRQRAEALLRQAAQQRLRLAHLLARRHPHGALRVDSEANPETVVYAAAAQRRRAAEGVLAAHAQRRRERLDELIGRPELRFGFDPLAPLPPPATAPAQH-----CSARNRCCE---------GMAAQQRKARPATEGSAAXXXXA-----HTTHER------LFERDGGSGAAPR-------------PQRRSAARAQALADAAHGGKTYDIVTNAALPPGLAPSVP-ERVCRWLAHPSQASLERGRNRQGALVAA 258          
BLAST of mRNA_P-fluviatile_contig16.2709.1 vs. uniprot
Match: F0YD14_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD14_AURAN)

HSP 1 Score: 121 bits (303), Expect = 1.260e-26
Identity = 137/444 (30.86%), Postives = 185/444 (41.67%), Query Frame = 1
Query:    7 ATNPRELERFVDNTYCRQGGDHFHHADDGSRVAAL---TSTATPI-SWDGLALDPRPFARLDEHDTFTFGKKP--AGSAGARVIELEGHAPGGI--FGRPATQPGHIQWTVEQETSRVLATDNPYKQAAADGRGVSVERPYFDAALAVAPKVQAVRPPTSIPRGGPQG-----DQALLAPEERREMNDYEAKMQAAERVGRKARHQKTRLDYIMKHRYPEGAIGVDSPYNLASEVHAEKRITRETREAASSAHAAARRQRLDEIRGNPRLRFGFDPWQHPDLPASGGIQHGVHGGVAGGDRGWDAAKPVGGNGGERFLQTKVRMGLGPAGPTTLPAGRRVDHAERERGSGGLD--LHGAHGSGAYVPSETFKNILGMRERVPKSDPAFRAQVLWDEACGRRSYNIVSGAQLP-LPTVKAERPPGRLAHPSQQSLERGRNLQASL 1290
            A NP  L++F+D+   + G      +  GSR  +     S   P  SWDGL++DPRPF+RLD       GK    AG AG RV+EL     GG   FG P+   G I  T  QE+   +         A D   V V R  FD    V  +V+ V  P  +P+    G       AL+AP ER E  ++E K Q A +V R+A  Q  RL   M+  +P G +GVDS  N  S V+       +   +  + HA  RR  L  I    + R G+DP+ H   P S      ++                       F+Q K             P   R   AE       +    H  +       ++T   I   R+     D   R Q L D     +SY++V+ A++   P+   ER    LAHPSQQS ERGRN Q SL
Sbjct:   17 AMNPALLDKFLDSYQPQYGSGSVGLSSAGSRALSAGRGQSLYDPARSWDGLSVDPRPFSRLDTKPLPGCGKHALSAGMAGHRVVELGPSPEGGALCFG-PSQYTGTIPLTETQESCARMP-------GAGDAAVVEVSR--FDNNHVVPAEVRLVATPACVPKVFAAGIADDLGGALVAPRERVEALNFEVKQQRAAKVLRRAEMQARRLTQYMRAHHPNGVLGVDSTANRKSAVYGAHAAEMQDLASYRTHHADRRRGNLSNILVGEQ-RHGYDPFAHDPTPRSD-----IY-----------------------FMQQKA---------CHPPYAGREKRAEFPTSKAPISAVFHSPY-------ADTNARIFMKRDHAVNKD---RRQHLRDMDIFGKSYDVVTHAKVEQFPSSVTERTNKILAHPSQQSEERGRNTQGSL 402          
BLAST of mRNA_P-fluviatile_contig16.2709.1 vs. uniprot
Match: A0A7S2XWR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWR7_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 7.780e-19
Identity = 66/150 (44.00%), Postives = 89/150 (59.33%), Query Frame = 1
Query:  232 RVIELEGHAPGGIFG-RPATQPGH--IQWTVEQETSRVLA-------TDNPYKQAAADGRGVSVERPYFDAALAV-APKVQAVRPPTSIPRGGPQGDQALLAPEERREMNDYEAKMQAAERVGRKARHQKTRLDYIMKHRYPEGAIGVDS 648
            RVI+LEGH  GG+FG   AT+PG   IQ T EQE  R  A        D+P ++ AA    + V+ P F  +  V A + QAV  P  + R G Q DQ LL PEERR++  YE + Q A ++ RKA +   R+ ++MK+R+PEG +GVDS
Sbjct:    2 RVIQLEGHPEGGLFGGTSATRPGQGRIQRTEEQELVRFGAHGDVKSIIDDPNRREAA----MVVDSPRFMGSKGVQALEAQAVEMPEVLARAGQQADQVLLLPEERRQIMMYEKRSQKAAKMQRKAENDHRRMMHLMKNRHPEGVLGVDS 147          
BLAST of mRNA_P-fluviatile_contig16.2709.1 vs. uniprot
Match: A0A7S2CRD4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CRD4_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.280e-18
Identity = 119/448 (26.56%), Postives = 188/448 (41.96%), Query Frame = 1
Query:    7 ATNPRELERFVDN-TYCRQGGDHFHHADDGSRVAALTSTATPISWDGLALDPRPFARLD---EHDTFTFGKKPAGSAGARVIELEGHAPGGIFGRPATQPGH----IQWTVEQETSRVLATDNPYKQAAADGRG---VSVERPYFDAALAVAPKVQAV-RPP---TSIPRGGPQGDQALLAPEERREMNDYEAKMQAAERVGRKARHQKTRLDYIMKHRYPEGAIGVDSPYNLASE--VHAEKRITRETREAASSAHAAARRQRLDEIRGNPRLRFGFDPWQHPDLPASGGIQHGVHGGVAGGDRGWDAAKPVGGNGGERFLQTKVRMGLGPAGPTTLPAGRRVDHAERERGSGGLDLHGAHGSGAYVPSETFKNILGMRERVPKSDPAFRAQVLWDEACGRRSYNIVSGAQLPL-PTVKAERPPGR--LAHPSQQSLERGRNLQASL 1290
            A NP  L  F+D+ T     G  F        +   T     +SWDGL+++P+PF+RLD   E +  T    P G AGARV+EL    P G+F    T+ G     +  T+ Q        + P  + A D +G   V      F    ++ P+V  V +PP   +++     Q  + LL P+ER ++  +E K Q A  + + A  Q+ RL  IM+HR+ EGA+GVD   + A    ++ ++   +   E+     A  RR +L  +    + R+G +P+ H                                   E FL           GP      +     + + GSG   L+            T   + G ++ V +++   R Q L DE    ++YN+     +   P+V  +R   +  + HPSQQ LERGRN+Q S+
Sbjct:   19 AMNPDRLTAFMDSSTKNMWSGQTF----SSKSIKPQTIYDPSLSWDGLSVNPKPFSRLDQTPEINACTL-TAPIGMAGARVVELSDGLPDGLF-EGVTKGGEGIQVVPRTLIQNDVNFNHPEAPAAKMAQDPQGDVMVMESGEGFMNMRSMPPRVTTVPQPPIVGSALDTSTGQLRRYLLTPKERSDLLKHEQKTQKANALQKTAELQQRRLVQIMRHRHREGAVGVDGVNSAAESGSLYEDRAAVKNAAESRRMRKAGDRRSKLATV-AFAQNRYGHNPFHHN----------------------------------EEFL-----------GP------QETKFMQTKGGSGRPGLN------------TQSRLFGAQQHVERAE---RTQHLRDEDLSGKNYNLTGHHNVQYAPSVVPQRVSEKSYMKHPSQQLLERGRNMQGSM 393          
BLAST of mRNA_P-fluviatile_contig16.2709.1 vs. uniprot
Match: A0A482SWK6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWK6_9ARCH)

HSP 1 Score: 66.2 bits (160), Expect = 3.320e-8
Identity = 54/192 (28.12%), Postives = 94/192 (48.96%), Query Frame = 1
Query:  133 SWDGLALDPRPFARLDEHDTFTFGKKPAGSAGARVIELEGHAPGGIFG--RPATQPGHIQWTVEQETSRV----LATDNPYKQAAADGRGVSVERPY-FDAALAVAPKVQAVRPPTSIPRGGPQGDQALLAPEERREMNDYEAKMQAAERVGRKARHQKTRL-DYIMKHRYPEGAIGVDSPYNLASEVHAEK 684
            SWD  + DP  F+RL++ +       P   +G  V++LE +         +PA     +  T EQ+  R+     A     + A    + + VERP  ++      P+++    P  I   GPQ DQ LL P++RR M +++ K   A+ + R+A+  +T++   +   +Y  GA+ +DS  NL SE++ +K
Sbjct:   42 SWDARSDDPASFSRLEQTNVPFQPSAPIVLSGTAVVKLERNEGFNALNVKQPAETVATVPLTREQQDVRMREDYTAKIPVLEHARLQNKVLLVERPNTYENQGVQGPRIREAEVPEFIREAGPQADQRLLNPKQRRAMMEFDKKKLEADHLLRRAQMDRTKVRKQLSSLQYHRGALMIDSSDNLDSEIYGDK 233          
BLAST of mRNA_P-fluviatile_contig16.2709.1 vs. uniprot
Match: A0A2R5GNF2_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNF2_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.280e-7
Identity = 46/135 (34.07%), Postives = 74/135 (54.81%), Query Frame = 1
Query:  454 PTSIPR----GGPQGDQALLAPEERREMNDYEAKMQAAERVGRKARHQKTRLDYIMKHRYPEGAIGVDSPYNLASEVHAEKRITRETREAASSAHAAARRQRLDEIR--GNPRLRFGFDPWQHPDLPASGGIQHG 840
            PT + R    G   GD+ L+ P+ERR ++++E K + AE++ RKA+  + R   +++ RYP G +GVDSP NL S ++  +    E  E   +  A  R++R D+I    + R+  GFD      +P  GG  +G
Sbjct:  147 PTHLARPVSMGANLGDK-LITPQERRLVHEFEKKTKMAEQLFRKAQSDRARALEVLRTRYPNGVLGVDSPNNLESSIYGHRA---EQLERVRAQTAEVRKRRADKIAYLSDSRVSRGFDLLTLETVPGDGGEDNG 277          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LDA3_ECTSI9.520e-20770.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6S9K570_HETAK1.260e-4232.19Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YYF5_9STRA5.030e-3036.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YD14_AURAN1.260e-2630.86Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2XWR7_9STRA7.780e-1944.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2CRD4_9STRA2.280e-1826.56Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A482SWK6_9ARCH3.320e-828.13Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A2R5GNF2_9STRA1.280e-734.07Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig16contigP-fluviatile_contig16:1066490..1073410 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score122.9
Seed ortholog evalue3.8e-25
Seed eggNOG ortholog44056.XP_009038310.1
EggNOG OGs2DQ9T@1,2S6BA@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons8
Model size1302
Cds size1299
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815693.4680893-UTR-P-fluviatile_contig16:1066489..10664921622815693.4680893-UTR-P-fluviatile_contig16:1066489..1066492Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 1066490..1066492 +
1693562952.2029648-UTR-P-fluviatile_contig16:1066489..10664921693562952.2029648-UTR-P-fluviatile_contig16:1066489..1066492Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 1066490..1066492 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815693.4810195-CDS-P-fluviatile_contig16:1066492..10665701622815693.4810195-CDS-P-fluviatile_contig16:1066492..1066570Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1066493..1066570 +
1693562952.2146416-CDS-P-fluviatile_contig16:1066492..10665701693562952.2146416-CDS-P-fluviatile_contig16:1066492..1066570Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1066493..1066570 +
1622815693.4929075-CDS-P-fluviatile_contig16:1066941..10670731622815693.4929075-CDS-P-fluviatile_contig16:1066941..1067073Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1066942..1067073 +
1693562952.2264097-CDS-P-fluviatile_contig16:1066941..10670731693562952.2264097-CDS-P-fluviatile_contig16:1066941..1067073Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1066942..1067073 +
1622815693.5071747-CDS-P-fluviatile_contig16:1067563..10677281622815693.5071747-CDS-P-fluviatile_contig16:1067563..1067728Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1067564..1067728 +
1693562952.2389274-CDS-P-fluviatile_contig16:1067563..10677281693562952.2389274-CDS-P-fluviatile_contig16:1067563..1067728Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1067564..1067728 +
1622815693.517018-CDS-P-fluviatile_contig16:1068550..10686421622815693.517018-CDS-P-fluviatile_contig16:1068550..1068642Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1068551..1068642 +
1693562952.2489567-CDS-P-fluviatile_contig16:1068550..10686421693562952.2489567-CDS-P-fluviatile_contig16:1068550..1068642Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1068551..1068642 +
1622815693.5290778-CDS-P-fluviatile_contig16:1069218..10693411622815693.5290778-CDS-P-fluviatile_contig16:1069218..1069341Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1069219..1069341 +
1693562952.2614086-CDS-P-fluviatile_contig16:1069218..10693411693562952.2614086-CDS-P-fluviatile_contig16:1069218..1069341Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1069219..1069341 +
1622815693.538613-CDS-P-fluviatile_contig16:1071480..10715951622815693.538613-CDS-P-fluviatile_contig16:1071480..1071595Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1071481..1071595 +
1693562952.2720435-CDS-P-fluviatile_contig16:1071480..10715951693562952.2720435-CDS-P-fluviatile_contig16:1071480..1071595Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1071481..1071595 +
1622815693.5480504-CDS-P-fluviatile_contig16:1072249..10724711622815693.5480504-CDS-P-fluviatile_contig16:1072249..1072471Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1072250..1072471 +
1693562952.2804515-CDS-P-fluviatile_contig16:1072249..10724711693562952.2804515-CDS-P-fluviatile_contig16:1072249..1072471Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1072250..1072471 +
1622815693.557438-CDS-P-fluviatile_contig16:1073038..10734101622815693.557438-CDS-P-fluviatile_contig16:1073038..1073410Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1073039..1073410 +
1693562952.288796-CDS-P-fluviatile_contig16:1073038..10734101693562952.288796-CDS-P-fluviatile_contig16:1073038..1073410Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 1073039..1073410 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig16.2709.1prot_P-fluviatile_contig16.2709.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig16 1066493..1073410 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig16.2709.1

>prot_P-fluviatile_contig16.2709.1 ID=prot_P-fluviatile_contig16.2709.1|Name=mRNA_P-fluviatile_contig16.2709.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=433bp
MATNPRELERFVDNTYCRQGGDHFHHADDGSRVAALTSTATPISWDGLAL
DPRPFARLDEHDTFTFGKKPAGSAGARVIELEGHAPGGIFGRPATQPGHI
QWTVEQETSRVLATDNPYKQAAADGRGVSVERPYFDAALAVAPKVQAVRP
PTSIPRGGPQGDQALLAPEERREMNDYEAKMQAAERVGRKARHQKTRLDY
IMKHRYPEGAIGVDSPYNLASEVHAEKRITRETREAASSAHAAARRQRLD
EIRGNPRLRFGFDPWQHPDLPASGGIQHGVHGGVAGGDRGWDAAKPVGGN
GGERFLQTKVRMGLGPAGPTTLPAGRRVDHAERERGSGGLDLHGAHGSGA
YVPSETFKNILGMRERVPKSDPAFRAQVLWDEACGRRSYNIVSGAQLPLP
TVKAERPPGRLAHPSQQSLERGRNLQASLIPA*
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mRNA from alignment at P-fluviatile_contig16:1066490..1073410+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig16.2709.1 ID=mRNA_P-fluviatile_contig16.2709.1|Name=mRNA_P-fluviatile_contig16.2709.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6921bp|location=Sequence derived from alignment at P-fluviatile_contig16:1066490..1073410+ (Porterinema fluviatile SAG_2381)
CTTATGGCGACCAATCCGCGAGAACTGGAGCGCTTCGTAGACAACACATA CTGCAGGCAAGGTGGAGACCACTTTCATCATGTTACAATGCTGGATATCC TCACTTTCTTAACGTACATCTTTTCAACATTGTCTAGTGTATGGTCCACG CAGATTGTCGTCGGCTGTGTGCAGTCCATGTGCTACCCTTGGCTATGGTA CACATGAACAGCAAGATCAATTTTCCTGCTCACGTATGGTTGACAGCAAG GAGCGTGGTAAATAAATGATGTGACATGCGAGTGGTCCTGTCTGAAAGCC TGACAGGATAACTCACATGAAGTTGGGCTGCCAATCGGACACGCTGACAA TTTCGGCGCGTGTATCGGTCGTTGATGAGGGAATGATGAAAACCAGCATG ACATTTCCACTCCGCCGTCATCTCACCCTCTTGCCCTAAATGGGTCAGGG AGGCAGACGATGGGAGCAGGGTAGCGGCATTGACTTCGACGGCTACGCCC ATAAGCTGGGACGGGCTGGCGCTAGATCCCAGACCATTCGCGCGGCTCGA CGAGCACGACACGTTCACGTTCGGGAAAAAGCCGGTACTCGCTTCATCAA CAACTTAGACTAATGAAAGCTGTCTAAGTTTTCTTGAACTCCTCACGCGG TGCACTTGTCAAGGTTCGATTGTAGGATCGTTTAGAGCGAAATGAGTCAA TGGGTGGGTGAAGATTCCCTAAATCATTGTTGTTGATACTAATTCCTGCA CAATGATTTTGCAATTTAGGTCCACTTGTGTCCGGTTGTTACCTTCATGA TCCGTGTCGCCCGATTATTCCATAGCCAAGCTACGAGGAACACACAACTC GCGTGCCTGGATATTTAATCTTGATTCACTATCACCTTGCGCCGTGAGCA ATACACCTACGGACCGATTTCTTATCCCTGACAAGAAGGGCGGCGGTAAG CTCTCCAGAAATATGTCAAGGGCGGTAACGGCAACAATCTTAACGAATGC TCGAGTCTGCACCTTGCTACCTGTTGTACAAAGTCTCCACCCTCATGCAT CCGCCCCCCCGTCACCTTCCCCAGGCTGGTAGCGCCGGGGCGCGCGTGAT CGAGCTCGAGGGGCACGCACCGGGGGGTATTTTTGGGAGACCGGCGACAC AGCCCGGGCATATTCAGTGGACTGTGGAGCAGGAGACCTCCCGCGTGTTG GCTACCGACAACCCTTACAAACAGGCGGCTGCAGATGGGGTGAGTTGTGC TCGCGGGTGTGTGCGTCGTGTTGTATCGCCGTTCGTTACTAGCCACAATC TCGTGACAATTCGTGCCGCAGAAGGGAGGAAACTCGGAGGGTTTCGTGAA TTGCTTCACTCTAGCACCTTGGGTGGCGGGTGGAATTGCCGCACGTAAGG TACCGATCGTGGACCAAGAAACGTGCGCTTAGAAGTTCACCAGATAACAC ACAACGGACATGGAAATGTCTAATACGGGGTCGAATTTTCCTGCCGGCAA GACTCCAGCTTCCGCGAGTTAACCCGCGCTCCGTCAAGTGCCAACCCGGC CCCGAACATGGACCTGAAATCAAGCAAATCATTTTGGGGGAAGACCTCGC TTTCGTAACGAACAGAGGCGCCTCCCGGCGCTAGGGCCTGTTGTGCAGCC TTGCAGCTCAATCGGAACGAGGATTATATTTTTCCTCAGACCAGAGCTTC AGCATTCTCGCTGGATTAACCCCTGAGCAGACTGCCGCACTCCGGGGATG GGCGGTCGGATATAGCGCGACCACTGAGCAAAAGCGTAGGAGGCAAATAT ATTTGGTTTCTTCCAATGACACATATATATAGAAGGACGAAATGCCGTTG ACGAGCACCATGGTGCCCAGGGAATCGTATGTTGCGAGGGAAAGTGGACA GAAGAGTTTATAGTGACGTTTTCTCGGGGCGACAGGAGCCATCACACGGA ACGTGCACTTACCGTCGAAACCTCGCAGGGATATGGGTAGGGGCATTTCG TACCTAACAGCGCAGCGGCATTTGTCCTCTCTTATTTTCTCTTCGCTTTC ACACGCGACAGAGAGGCGTAAGCGTGGAGAGGCCGTACTTTGATGCCGCA CTTGCAGTTGCGCCGAAAGTTCAGGCCGTCCGCCCTCCCACCTCCATTCC TCGGTGAGAAGGAGTAGCGCGAGATTCGCTTCTTACGGTAGTCGGTGCTG ATTTCGCCATTCGAACGAACAGTCGTTTGCCTTTTGTCCCACAAATGGAG ATGCCGAGCTCGTCAGCGAGAACGTCAGTTAGCTTCCTGCAGGCAAAAAT ACATGGCATCGGCGTGCCTCCATTGCACGCGTCAACAATAATGGAGCAAC TAGGTCATGTGCGAATCGTGGTGTTGGGCATGGTCGACGGAAGTTGATAG CAGAGCGTCATGTAGAGTAGAAAATTATGCCTGAATGGTTAGATTATCTT TGGGCGTTGATCACGGCGAAGTCACCGCGTTGTTTTTGGGTGTAGGTCAT GGTGGAGTGAGTCACCTTATACGCTCGCATTCCGCCAGGCAAGCTGTGAT CCTCCTGCCCACAGCACCAATGCCTCGGGTTCGCCAACAAGAGCTCTCGA GCACGCCGGTGACTCCATTTTTCTCTTGTGCCAACAAATGTTACCAGAAA ACAAACCCGCCCATACTCTCTTGAGTCCCTTTCCCGAGAAGGTACACAAA ATTCGTCCCCATGTTCCAAAAAATTGCAGGGGCGGACCTCAAGGTGACCA GGCTCTTCTGGCGCCGGAGGAACGGCGGGAAATGAATGACTACGAGGCGA AGATGCAGGCCGCGGAGCGGGTGGGTCGGAAAGCGCGGCATCAAAAGACG AGGTGAGGAGGAGCTCTCCTGTCTCCGCGCCGGCGCGACCTGTCAAGCAA GCGCCTGGCGCAGCGTGGTTGTGGGTCCAAATTCAAACGTGATGCAGGCC TATCACGAAGGAATGTCGGCGTTCGGCCAATTTCTTCTTTCAATTGATTT TTGCTACACAAGGGGTTAAGCCTTGCTTCAAGCATGCCGACAGATTGGCC AGCACCGCAGGGCTCTGCAGGGAGCACATGAAGCAAGCATTTCTATGACC CATTGTCGACCTGCTGCTGTACCAGAACTACATTTGACTACTGGACCGTA ATAGGTGTAGTGGTGGCCTATGGACAATCACTGTTTTTCAAGCTAACTAC ATTGTAGAGGTATTCGCTGACCAACAGTTGTTCATGCGCGTTACTTTGCC CGTTTCTCGCGAATGATGACCATCCATTGTCGTGACCCGACGACGCGCTG GCGGCAAAACGTCGAGCACCTGCAGGGGGTGGTCACAAATGACGCTGGAT TTTTGTTGTTGTTTTGTCGTTGTCGTTGTCGTTGTTGTCTGCACATTCAA AACCATCCCGACCTCTCCGTCCCTTACCCCCTTCTATCCGTACTTATCAA CACTTGCCACGGTCACAGGATAACTTACTCTTATAAAGGTTAACATAAAC AAAAAGAAAGGAAGTGGAACCGGAGGGTCCGCAAAGCGATGCAATTCAGT CACAGATAGCTTAGAGCTCCCCTGTCTCCCCTACACGCTGTGTGAGGTAG AAACTAGTAGAACGAGTGAAATTGGAAAAGTCAAGATCATCAACCTGGGT ACTCCCCGCCCCCGGATTCTATCTTGGTACCCCTACAATGCCAGGGTTTC CGTGCCGGGTGTTGGCCCGGCAGGCAAACAAATCGAATCCTCCGTACCGC TTTTCCACGCAGGCATGGTAATCGACAAGCAGAAGGATAACAATAAATAG ACACGAATATACCAGCAAGAAACACGGTACAGACAAAGGCGCGAAATAAA CAGGACCAAAGAGAATAACGTCGCCACTACCTAGAGCGGGAGGGAACAGC ATTAGTCAGGGGAACGAAACATCATACGCGATCCTCATCTTCGCTCTTGC TTTTTTCCCGCGCCGTGTCGCTCCTCTTCTGTTGCCTTCTCCTTCCCCCT TCTTCTTGCCTTCTCCAAGCCATTCTTGGTCTGGGTGTCTTGCTTGACTG CTCTTTTCCGGCTAGCCTCCTCCTCGCCCTTGCGTCAGGAGGTCATGAAC CTCTCAGCACCCTTCACCACCCCCGCGTGTCACGTATTTCCCCCTGCACC TGCGCTTCCGTCCAAATTGATTCCGGGACCACTTAGTCACACGGCTCGTC GTCGGTAGAGCACTGCGTCGCCCCCGCCTTGAAGTCGTCCTTCCGGTACT TCTCCCAGCTCTGCTCCTTTCCCCCCCTGCCTGGGTCTCTGCCCCCTTCC AGTAGTTCCCCGAACATCAGTCGCTTTGGGAGTCGCCCGTCCGACTGCCT GGCGACGGCCCCCGCGAACAGCAGGCGTCGCTGTCGGACAGATGCCTCCA TTCTTTGGCAGCCGTCCCTCCTCAGGGGCCTGGGCGTAAGATAGCGGTCG GTAGGTGCCGCGCTTGCGTCGGTATAGTCCGCAGAAGAAGCGCACGGAAG AGGCGTTGCGACCATGCTCTTGCAAGCTGATAAATAACGATTTGCACGTG CCCCTTACCCTACAACGGGCGATGAAATTCATGGTTTGCAGCGGCGGGGA TATAAAGACTCAATAATGCCACATACGCTGCCATAGAGCCGCTTCTAGGT ACGGTTAAGGGCACGGCGGGGCGACGTCGTTTGCTACAAACTTCCCACAG TCCACGGCAGACTTCTGTGATCCGCACGATTGCTTACGGCGGCTTGAGGG CCCGCCTCTTGCCCCTTTGGCCTCGACCCGTTCACGGGACGGAGGTGGCG ATCGAATGTTCAATTTCGAAGTACACACGGAGTCACGATGAATACGCCCC ATTCTCATCCCACCCCCGTCGGAAGTAAACGATTCGTTATTATGTGTGCT TTGATCAGGCGAAACCCCTTCCCCTTTCCTCCCTTTCGCTCTCCCCCCCT TCCCCCCTCCACAAACCGGAAACGTCACGTGCAATGGGAAGGCTTGACTA CATCATGAAGCACCGCTACCCGGAGGGTGCCATTGGCGTGGACTCCCCGT ACAACCTCGCCTCGGAGGTGCACGCAGAGAAGCGAATCACCAGGGAGACG AGAGAGGTGACGGTGTTGACAGCTGTACAAAGTATGTAGTAAACTATTAA TAACAAGTTACGACCTGGTACAAAGATAAAGGGTTAAGCTTCAGTGTTCA TCTCATTCACGTGTAGCTGCAGACGACGAATTGCCCAGTACAAGACTCGG AAATCGAACACCCACGCGGAAAGATCTTTAGATAGCCTGTCCCCCCTTCC GCACCCTGAACACCCTCTGCACTTTTCCAACTCCGGCGGAGAAAAAATCC TCCTCCTTTTCCTTGGACTGGAGGTCCCCTCGCCAACGAGCTATTGGTGG CAAACGCTTTCGTCTACTATCCAGCGCCCGCTAAAGCAGGGCGAATGTCG GGAAATGGTCTTAGGCTCCTGAGATATCCAGCTTGAGAGATCCAAGATTG CAGTCAGTCCGAGTAACGACCCGTGCAAATCCAACCGATGGCGAAATGTC CTCCCCCCCCCCGCCAAAACAAAAGCAGCACTATAACAGATGTTTGGTCG AGTCGATCGTCGTTCATAATGTGCAGATCATGCGGCGAAATCGTTGACCA CAAGAACAATGACCCGTCAATTCGGTTTTGCTCGGCGGGAGCGCAAACAC ACCCGAAGCTCATCGAAGTGGCGTTCATACCCGTCGCCGACACCCCATCG CCCCGAGCAGGCGGCGTCGAGTGCGCACGCAGCCGCCCGACGCCAGCGCC TGGACGAAATCAGAGGGAACCCGCGGCTCCGCTTTGGCTTCGACCCTTGG CAACACCCCGACCTTCCGGCAAGCGGCGGGATCCAGCATGGAGTGCACGG GGGGGTTGCGGGCGGCGACCGTGGGTGGGACGCGGCGAAACCGGTCGGCG GCAATGGTGGCGAGCGATTCTTGCAGACTAAGGTGAGTGGCGAGGTACGC CGTCGCGGAACTCGCGGCCTTCGCCGTTGCTCACTTGTGGGAAGTTGGCG AATGGTTCGAAACTGGATTCTCCACAGCATTTTTTTTCTTCTTATGGTCG CAGGGTCAAGTTGAGCTACTTGATGTGACGAAAAATCCTCCAAAAGACAA AGGACAGACTCGAAACACTAGCATGTGAGGTTTCTATCTCGTATTGATAC CGCGTGACAAATTCCAGTAGAAAATGCGTCTCATGCGACTTCAGACGAGC AGCTGTCATTTCTGGTGCACGTGCAGACTGATTCACGCAGCCTCCGCCCC TCCCCCAGACCTCCCGACCGTGTTTCGATGACGAAAACCGGGCATGATCG TTGAGTACATCCTCCCGCGATCGCGAGCGAAGGTCCCGCACCCGTGCGTC CCAAAGTCCTGGGACAATGGCGCCGCGACCACTAGGCGGGAGACATTAAC ACCGGAAAACAATCGGCGTTTGCTACGAAATAAAAAAAACATTGGTTGGA ATGAACCTTATGTACTCTGTATGGGGTTTCTCGATTGCATATCGCCCAGG TCAGAATGGGTCTAGGACCAGCGGGGCCCACGACCCTTCCGGCAGGGAGA CGAGTCGACCACGCCGAGCGCGAGAGAGGGTCCGGCGGCCTAGATCTCCA CGGCGCCCACGGGTCTGGGGCATACGTCCCGAGCGAGACCTTCAAGAACA TCCTCGGGATGAGAGAGCGGGTTCCAAAGTCCGATCCCGCCTTCCGGGCA CAGGTGCTTTGGGACGAAGCGTGCGGGCGGCGTTCCTACAACATAGTCTC CGGCGCGCAGCTCCCGCTGCCGACGGTTAAGGCCGAGCGGCCCCCGGGGC GCCTTGCCCACCCCTCGCAGCAGTCGCTAGAGCGCGGGAGGAACCTGCAG GCGTCGTTGATCCCGGCATAA
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Coding sequence (CDS) from alignment at P-fluviatile_contig16:1066490..1073410+

>mRNA_P-fluviatile_contig16.2709.1 ID=mRNA_P-fluviatile_contig16.2709.1|Name=mRNA_P-fluviatile_contig16.2709.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2598bp|location=Sequence derived from alignment at P-fluviatile_contig16:1066490..1073410+ (Porterinema fluviatile SAG_2381)
ATGGCGACCAATCCGCGAGAACTGGAGCGCTTCGTAGACAACACATACTG
CAGGCAAGGTGGAGACCACTTTCATCATATGGCGACCAATCCGCGAGAAC
TGGAGCGCTTCGTAGACAACACATACTGCAGGCAAGGTGGAGACCACTTT
CATCATGCAGACGATGGGAGCAGGGTAGCGGCATTGACTTCGACGGCTAC
GCCCATAAGCTGGGACGGGCTGGCGCTAGATCCCAGACCATTCGCGCGGC
TCGACGAGCACGACACGTTCACGTTCGGGAAAAAGCCGGCAGACGATGGG
AGCAGGGTAGCGGCATTGACTTCGACGGCTACGCCCATAAGCTGGGACGG
GCTGGCGCTAGATCCCAGACCATTCGCGCGGCTCGACGAGCACGACACGT
TCACGTTCGGGAAAAAGCCGGCTGGTAGCGCCGGGGCGCGCGTGATCGAG
CTCGAGGGGCACGCACCGGGGGGTATTTTTGGGAGACCGGCGACACAGCC
CGGGCATATTCAGTGGACTGTGGAGCAGGAGACCTCCCGCGTGTTGGCTA
CCGACAACCCTTACAAACAGGCGGCTGCAGATGGGGCTGGTAGCGCCGGG
GCGCGCGTGATCGAGCTCGAGGGGCACGCACCGGGGGGTATTTTTGGGAG
ACCGGCGACACAGCCCGGGCATATTCAGTGGACTGTGGAGCAGGAGACCT
CCCGCGTGTTGGCTACCGACAACCCTTACAAACAGGCGGCTGCAGATGGG
AGAGGCGTAAGCGTGGAGAGGCCGTACTTTGATGCCGCACTTGCAGTTGC
GCCGAAAGTTCAGGCCGTCCGCCCTCCCACCTCCATTCCTCGAGAGGCGT
AAGCGTGGAGAGGCCGTACTTTGATGCCGCACTTGCAGTTGCGCCGAAAG
TTCAGGCCGTCCGCCCTCCCACCTCCATTCCTCGGGGCGGACCTCAAGGT
GACCAGGCTCTTCTGGCGCCGGAGGAACGGCGGGAAATGAATGACTACGA
GGCGAAGATGCAGGCCGCGGAGCGGGTGGGTCGGAAAGCGCGGCATCAAA
AGACGAGGGGCGGACCTCAAGGTGACCAGGCTCTTCTGGCGCCGGAGGAA
CGGCGGGAAATGAATGACTACGAGGCGAAGATGCAGGCCGCGGAGCGGGT
GGGTCGGAAAGCGCGGCATCAAAAGACGAGGCTTGACTACATCATGAAGC
ACCGCTACCCGGAGGGTGCCATTGGCGTGGACTCCCCGTACAACCTCGCC
TCGGAGGTGCACGCAGAGAAGCGAATCACCAGGGAGACGAGAGAGGCTTG
ACTACATCATGAAGCACCGCTACCCGGAGGGTGCCATTGGCGTGGACTCC
CCGTACAACCTCGCCTCGGAGGTGCACGCAGAGAAGCGAATCACCAGGGA
GACGAGAGAGGCGGCGTCGAGTGCGCACGCAGCCGCCCGACGCCAGCGCC
TGGACGAAATCAGAGGGAACCCGCGGCTCCGCTTTGGCTTCGACCCTTGG
CAACACCCCGACCTTCCGGCAAGCGGCGGGATCCAGCATGGAGTGCACGG
GGGGGTTGCGGGCGGCGACCGTGGGTGGGACGCGGCGAAACCGGTCGGCG
GCAATGGTGGCGAGCGATTCTTGCAGACTAAGGCGGCGTCGAGTGCGCAC
GCAGCCGCCCGACGCCAGCGCCTGGACGAAATCAGAGGGAACCCGCGGCT
CCGCTTTGGCTTCGACCCTTGGCAACACCCCGACCTTCCGGCAAGCGGCG
GGATCCAGCATGGAGTGCACGGGGGGGTTGCGGGCGGCGACCGTGGGTGG
GACGCGGCGAAACCGGTCGGCGGCAATGGTGGCGAGCGATTCTTGCAGAC
TAAGGTCAGAATGGGTCTAGGACCAGCGGGGCCCACGACCCTTCCGGCAG
GGAGACGAGTCGACCACGCCGAGCGCGAGAGAGGGTCCGGCGGCCTAGAT
CTCCACGGCGCCCACGGGTCTGGGGCATACGTCCCGAGCGAGACCTTCAA
GAACATCCTCGGGATGAGAGAGCGGGTTCCAAAGTCCGATCCCGCCTTCC
GGGCACAGGTGCTTTGGGACGAAGCGTGCGGGCGGCGTTCCTACAACATA
GTCTCCGGCGCGCAGCTCCCGCTGCCGACGGTTAAGGCCGAGCGGCCCCC
GGGGCGCCTTGCCCACCCCTCGCAGCAGTCGCTAGAGCGCGGGAGGAACC
TGCAGGCGTCGTTGATCCCGGCATAAGTCAGAATGGGTCTAGGACCAGCG
GGGCCCACGACCCTTCCGGCAGGGAGACGAGTCGACCACGCCGAGCGCGA
GAGAGGGTCCGGCGGCCTAGATCTCCACGGCGCCCACGGGTCTGGGGCAT
ACGTCCCGAGCGAGACCTTCAAGAACATCCTCGGGATGAGAGAGCGGGTT
CCAAAGTCCGATCCCGCCTTCCGGGCACAGGTGCTTTGGGACGAAGCGTG
CGGGCGGCGTTCCTACAACATAGTCTCCGGCGCGCAGCTCCCGCTGCCGA
CGGTTAAGGCCGAGCGGCCCCCGGGGCGCCTTGCCCACCCCTCGCAGCAG
TCGCTAGAGCGCGGGAGGAACCTGCAGGCGTCGTTGATCCCGGCATAA
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