mRNA_P-fluviatile_contig16.2687.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig16.2687.1 vs. uniprot
Match: D7FHF8_ECTSI (Ribonuclease HI n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF8_ECTSI) HSP 1 Score: 265 bits (677), Expect = 4.980e-81 Identity = 172/349 (49.28%), Postives = 217/349 (62.18%), Query Frame = 3
Query: 252 MAACLLKAVGLGAARQ----------CTLLGHA-----------FPSSNANRV--RAGITVVSMESKLSKTAISRMRVAELKQELAERGLEETGTRPVLQARLGEAAEDEWARSVMGRAHQRSRRRSAGTLPAEAGASIAPPPPGLARGVGAAKHTRVVPRSQQRSRSTSAGSPVSKPARTSSSPTHVLQFDGGSRGNPGPSGAGAVLYRLDGNGARQEVWSGSLWAGPGRTNNEAEYMGLIEGLRAAKDLGVKRLTVEGDSQLVIRQMLGMYK------------------VSSPNMVPLFKKAKNLAKVFQRLELEHIDRARNGRADTLANIAMDTRKSSSFIHPDF 1175
MA CL++A GLGA+R C+ G + +A+RV RA T V M + +S+TAI++MRVAEL++ELA RGL+ TG RPVLQ RL EA E EWA++V+ R+ QR R + T P A + APP P ++ + PR +Q+ + + +KP R S+ TH+LQFDGGSRGNPGPSG GAVLYRLD +G R+EVWS S+W G RTNNEAEY GLIEGL AA+ LG+KRL+VEGDS+LVI+QMLG YK V+SP M PLF++A ++K F LEL HI RA N RAD LANIAMDT SSS H +
Sbjct: 1 MAVCLMRAAGLGASRPLAFAARHQRACSAAGRSKAWCSRGGXXXXXXXSASRVSSRALGTGVRMGAAISRTAIAKMRVAELREELASRGLDNTGIRPVLQGRLIEAKETEWAQAVIDRSRQRERSNT--TEPPRAAGTTAPPGPARSQVATSQAARTPSPRIRQQQQQRGISTSSTKPGRQRST-THLLQFDGGSRGNPGPSGCGAVLYRLDESGEREEVWSSSVWIGEKRTNNEAEYRGLIEGLIAAEKLGIKRLSVEGDSKLVIQQMLGNYKGKQGKTERGGVGGGRGGGVTSPKMQPLFREATTISKAFDALELGHIMRAHNERADDLANIAMDTETSSSCTHRSY 346
BLAST of mRNA_P-fluviatile_contig16.2687.1 vs. uniprot
Match: A0A7S2KCF7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF7_9STRA) HSP 1 Score: 138 bits (348), Expect = 3.180e-35 Identity = 71/138 (51.45%), Postives = 93/138 (67.39%), Query Frame = 3
Query: 738 THVLQFDGGSRGNPGPSGAGAVLYRLDGNGARQEVWSGSLWAGPGRTNNEAEYMGLIEGLRAAKDLGVKRLTVEGDSQLVIRQMLGMYKVSSPNMVPLFKKAKNLAKVFQRLELEHIDRARNGRADTLANIAMDTRKS 1151
T+VLQFDGGSRGNPG +GAG VLY G+ EVW G + G TNNEAEY GL+ GL+ A+ +GV + V+GDS+L+++Q+ G YK S ++P F K+L K F E+ HI R +N RAD LAN AMD R++
Sbjct: 10 TYVLQFDGGSRGNPGTAGAGMVLYDEVGH----EVWHGRHYLGEHSTNNEAEYTGLLAGLKCARAIGVSNIVVQGDSELIVKQLQGKYKCKSSKLIPYFTSVKSLIKGFNSFEVRHIPREQNFRADELANEAMDWREN 143
BLAST of mRNA_P-fluviatile_contig16.2687.1 vs. uniprot
Match: A0A6T8JIG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8JIG0_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.530e-34 Identity = 72/142 (50.70%), Postives = 92/142 (64.79%), Query Frame = 3
Query: 738 THVLQFDGGSRGNPGPSGAGAVLYRLDGNGARQEVWSGSLWAGPGRTNNEAEYMGLIEGLRAAKDLGVKRLTVEGDSQLVIRQMLGMYKVSSPNMVPLFKKAKNLAKVFQRLELEHIDRARNGRADTLANIAMDTRKSSSFI 1163
T+ LQFDGGSRGNPG SGAG V+Y N QEVW+GS TNNEAEY L++GL+ A+ LG++ L V+GDS L++ Q+ G YKV S ++ P + A L F E+ HI R NGRAD LANIAMD+ ++ I
Sbjct: 36 TYNLQFDGGSRGNPGLSGAGMVIY----NDKSQEVWNGSYLLPKEATNNEAEYTALVKGLQHARRLGIRHLAVQGDSNLIVMQITGRYKVKSQHLKPFHRDAVELRSAFSTFEISHIPREENGRADELANIAMDSASCTNGI 173
BLAST of mRNA_P-fluviatile_contig16.2687.1 vs. uniprot
Match: A0A6C0DSN1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DSN1_9ZZZZ) HSP 1 Score: 135 bits (340), Expect = 4.860e-34 Identity = 69/139 (49.64%), Postives = 94/139 (67.63%), Query Frame = 3
Query: 741 HVLQFDGGSRGNPGPSGAGAVLYRLDGNGARQEVWSGSLWAGPGRTNNEAEYMGLIEGLRAAKDLGVKRLTVEGDSQLVIRQMLGMYKVSSPNMVPLFKKAKNLAKVFQRLELEHIDRARNGRADTLANIAMDTRKSSS 1157
+ L+FDG S+GNPGP+GAGAV+Y+ D +E+W+ S++ G TNN AEY GLI GL A +LG+K L V GDS+L+I+QM G YKV S N++ + KAK L++ + EHI R N RAD LAN + ++ SSS
Sbjct: 27 YCLKFDGCSKGNPGPAGAGAVIYKND-----EEIWANSVYVGDKETNNVAEYNGLIMGLTKANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEYYLKAKTLSRFLSEVHYEHIYRKDNTRADELANFGLQSKLSSS 160
BLAST of mRNA_P-fluviatile_contig16.2687.1 vs. uniprot
Match: A0A7S2ULA3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULA3_9STRA) HSP 1 Score: 136 bits (343), Expect = 9.060e-34 Identity = 71/141 (50.35%), Postives = 95/141 (67.38%), Query Frame = 3
Query: 738 THVLQFDGGSRGNPGPSGAGAVLYRLDGNGARQEVWSGSLWAGPGRTNNEAEYMGLIEGLRAAKDLGVKRLTVEGDSQLVIRQMLGMYKVSSPNMVPLFKKAKNLAKVFQRLELEHIDRARNGRADTLANIAMDTRKSSSF 1160
T+V++FDGGSRGNPG +G G VLY D EVW+G + TNNEAEY GL+ GL+ A+ +GV+ + V+GDSQL++ Q+ G YKV S N++PLF+ +L + F E+ HI R +NGRAD LAN AMD + S F
Sbjct: 77 TYVMRFDGGSRGNPGIAGCGMVLYDAD---TGMEVWTGRQYLETA-TNNEAEYKGLLLGLQCARSMGVENIVVQGDSQLIVYQIEGKYKVKSKNLIPLFRAVMDLKRQFSFFEIGHIYRDKNGRADELANEAMDHKTSMGF 213
BLAST of mRNA_P-fluviatile_contig16.2687.1 vs. uniprot
Match: A0A6C0DKZ1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DKZ1_9ZZZZ) HSP 1 Score: 134 bits (338), Expect = 9.120e-34 Identity = 68/132 (51.52%), Postives = 92/132 (69.70%), Query Frame = 3
Query: 741 HVLQFDGGSRGNPGPSGAGAVLYRLDGNGARQEVWSGSLWAGPGRTNNEAEYMGLIEGLRAAKDLGVKRLTVEGDSQLVIRQMLGMYKVSSPNMVPLFKKAKNLAKVFQRLELEHIDRARNGRADTLANIAM 1136
+ L+FDG S+GNPGP+GAGAV+Y+ D QE+W+ S + G TNN AEY GLI GL A +LG+K L V GDS+L+I+QM G YKV S N++ + KAK L+++F ++ EHI R N RAD LAN+ +
Sbjct: 28 YCLKFDGCSKGNPGPAGAGAVIYKND-----QEIWANSKYVGDKETNNVAEYHGLIMGLSRANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEHYLKAKTLSRLFDNIKYEHIYRKDNTRADELANLGL 154
BLAST of mRNA_P-fluviatile_contig16.2687.1 vs. uniprot
Match: A0A6C0I5H6_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0I5H6_9ZZZZ) HSP 1 Score: 130 bits (328), Expect = 1.270e-32 Identity = 74/130 (56.92%), Postives = 92/130 (70.77%), Query Frame = 3
Query: 741 HVLQFDGGSRGNPGPSGAGAVLYRLDGNGARQEVWSGSLWAGPGRTNNEAEYMGLIEGLRAAKDLGVKRLTVEGDSQLVIRQMLGMYKVSSPNMVPLFKKAKNLAKVFQRLELEHIDRARNGRADTLANI 1130
+ L FDG S+GNPG +GAGAVLY D NGA E+++ S++AG TNNEAEY GLI GL A G+ L V GDSQLVIRQM G YKV+SPN+VPL + A LA F ++E EH+ R +N RAD L+N+
Sbjct: 2 NTLFFDGCSKGNPGRAGAGAVLY--DPNGA--ELFAESVFAGYSATNNEAEYTGLILGLNTALKQGITELQVRGDSQLVIRQMQGKYKVNSPNLVPLHQCATTLASKFAKIEFEHVYRDKNQRADALSNV 127
BLAST of mRNA_P-fluviatile_contig16.2687.1 vs. uniprot
Match: A0A4D9D4W7_9STRA (RNase H type-1 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4W7_9STRA) HSP 1 Score: 135 bits (339), Expect = 8.370e-31 Identity = 71/142 (50.00%), Postives = 98/142 (69.01%), Query Frame = 3
Query: 741 HVLQFDGGSRGNPGPSGAGAVLYRLDGNGARQEVWSGSLWAG--PGRTNNEAEYMGLIEGLRAAKDLGVKRLTVEGDSQLVIRQMLGMYKVSSPNMVPLFKKAKNLAKVFQRLELEHIDRARNGRADTLANIAMDTRKSSSF 1160
++L+FDGGSRGNPGP GAG V+Y + +V SLW G P TNNEAEY GL+ GLRAAK LG++R+ VEGDSQLV+RQ+LG+YKV + + L+ +A L + F + H++R++N AD LAN A+D + + +F
Sbjct: 337 YLLRFDGGSRGNPGPGGAGIVIYEQA---SLVQVRGLSLWLGSDPPLTNNEAEYHGLVAGLRAAKKLGIRRICVEGDSQLVVRQILGVYKVRNERLRVLYSEAMALKENFAEFSIRHVERSQNSDADALANRALDEQCNGTF 475
BLAST of mRNA_P-fluviatile_contig16.2687.1 vs. uniprot
Match: A0A6C0HEB0_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HEB0_9ZZZZ) HSP 1 Score: 127 bits (318), Expect = 9.130e-31 Identity = 74/159 (46.54%), Postives = 97/159 (61.01%), Query Frame = 3
Query: 699 SPVSKPARTSSSPTHVLQFDGGSRGNPGPSGAGAVLYRLDGNGARQEVWSGSLWAGPGRTNNEAEYMGLIEGLRAAKDLGVKRLTVEGDSQLVIRQMLGMYKVSSPNMVPLFKKAKNLAKVFQRLELEHIDRARNGRADTLANIAMDTRKSSSFIHPDF 1175
SP PA +S +VL+FDG S+GNPGP+GAGAVLY D +E+W + G TNN AEY GL+ GL A ++ L V GDSQLVI+QM G YK+ S N+ PL+ +AK++ K F ++ EHI R N RAD LAN A++ + I F
Sbjct: 16 SPKIIPAYGENSFEYVLKFDGCSKGNPGPAGAGAVLYYND-----REIWYNRKFVGRKETNNYAEYCGLLLGLNEALRENIRELKVCGDSQLVIKQMKGEYKLKSENLYPLYTEAKSMEKQFDKIVYEHIYRQYNSRADELANAALEDQDFVDEIKSGF 169
BLAST of mRNA_P-fluviatile_contig16.2687.1 vs. uniprot
Match: UPI001C4A04BA (bifunctional RNase H/acid phosphatase n=1 Tax=Pseudonocardia sp. KRD291 TaxID=2792007 RepID=UPI001C4A04BA) HSP 1 Score: 130 bits (327), Expect = 9.690e-30 Identity = 78/158 (49.37%), Postives = 97/158 (61.39%), Query Frame = 3
Query: 744 VLQFDGGSRGNPGPSGAGAVLYRLDGNGARQEVWSGSLWAGPGRTNNEAEYMGLIEGLRAAKDLGVKRLTVEGDSQLVIRQMLGMYKVSSPNMVPLFKKAKNLAKVFQRLELEHIDRARNGRADTLANIAMDTRKSSSFIHPDFGDSTKR*KKPVGAT 1217
V++ DGGSRGNPGP+G GAV+ DG EV+ G A TNN AEY GLI GL AA +LG + V DS+LV+ QM G +KV P MVPL ++A++LA F R++ E I RARN RAD LAN AMD S + G +T+ P GAT
Sbjct: 2 VVEADGGSRGNPGPAGYGAVVLDADGETVLAEVFDGLGRA----TNNVAEYNGLIAGLAAALELGATEVDVRMDSKLVVEQMCGRWKVKHPAMVPLAQRARDLASEFDRIDYEWIPRARNSRADALANKAMDGGSSPTVASAPLGGATES-SDPTGAT 154 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2687.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig16.2687.1 >prot_P-fluviatile_contig16.2687.1 ID=prot_P-fluviatile_contig16.2687.1|Name=mRNA_P-fluviatile_contig16.2687.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=338bp MIVESTQQYLFPRLTAGLLFIVTMAACLLKAVGLGAARQCTLLGHAFPSSback to top mRNA from alignment at P-fluviatile_contig16:866794..873332+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig16.2687.1 ID=mRNA_P-fluviatile_contig16.2687.1|Name=mRNA_P-fluviatile_contig16.2687.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6539bp|location=Sequence derived from alignment at P-fluviatile_contig16:866794..873332+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig16:866794..873332+ >mRNA_P-fluviatile_contig16.2687.1 ID=mRNA_P-fluviatile_contig16.2687.1|Name=mRNA_P-fluviatile_contig16.2687.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2028bp|location=Sequence derived from alignment at P-fluviatile_contig16:866794..873332+ (Porterinema fluviatile SAG_2381)back to top |