mRNA_P-fluviatile_contig16.2683.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig16.2683.1 vs. uniprot
Match: A0A6H5L4C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C8_9PHAE) HSP 1 Score: 1077 bits (2785), Expect = 0.000e+0 Identity = 868/1611 (53.88%), Postives = 998/1611 (61.95%), Query Frame = 3
Query: 828 SLPPVSPASATSSGRFVVGVXXXXXXXSHKRGMFS-VASYATP-GSELMYSPSPSSASKELQETKRQQRALGGARELRASAASSTGSVGGFAHHRSDSNYGNESNEHGEDRASVGGDXXXXXXXXXXIGSVISINKGDGREENSDHSGEGVDDDEISTVSRGSLLVGGHTTAVKRQEIPTVIIPTDGDG-GDGGSEAPEEYKLGDGNDETLSDNSRHLESDDDGDCDGLVGSSFLGNFGSFGDHGAIATADGVSVGTFAGGA--EGWARVAGLKARGLSSR-THPRIRPTHASPKAKPANASRNPP--NGSGLGGVALVTSPGGAGVLDAFCSPLSEATAAAADSGMTQAANLATAVRFGGVSDIQANLARAEKSQLVGRDGEGASLLMHAAQRGETEVFGVVLDILAEKLSPQE---VLAEFCAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGSRELMEQLLMFSEDREKGSILEAVAMAGWLSRGPPLQPALLELLDAAWDELEWRLDDDSLISG-----------------------GSFLRAALRTGLL--AGSRGLRE-------------------------------------------SNLEKLVIQVLVNLPVSVLAFNKRGIGGGNS-ISSRLSSFARMNSNTSLVAGGVGGGXXSGYSRS------RRLQGGALSSANTSAGVQAATGFLDLRRAFGGTSGVNPTGASWSGALPAGGSKHDWGSRRGSESGGCAGFSIRARESLLVAGWVFEPESEAVEMRSGAFEGPLASALRMGWVEFVRSPIVLDLLWAKLTAGVELEIRPTAAEVSQ------------WYPSIAPPTPAGETATADAAPVNSTTXXXXXXXXXXXXXM------ARGEGGEARRSSPDSLNGVFAGGWDITIAPLLQAVLVEVVARPELFYGVPAARLALDIVVYLCMLAVYTILLYRVEPGGIGPLEVLVYVWVIGMCVSQV--GEGTEAGGGHTKSHCGKPAANSKRQRHVQRTRPKERQLXXXXXXXXXXXXXXXXXXXXXXXXNRLRSPPFLYGRLATVVLVAAFLCRVGDLSQDYGGDGRATAAADGEWRFFEASFALLAAAAPFLLFGLVQAAASFLPCLGPTVKAVDQLGLVASRVLPALACILLGTALALHALYGEGSPLLEGTNLPEEFVEGFRTFGLACGTVARAGLGEIRPPDEDVPYGEALHALLYIVAAAGALCLVSILVAVLSNSKAACPVEMENQFQLNRARVIVSAAEVSRTNRLPAPFNLAQGGLALMVWAAGLCCGAPNRRKAVSGACSLFGRCIFWVILSPCALMSAIILNVASLLCFWWVSWKRVLDIPHEAARVMAALLRTTIWCCLGVPLRLVILWAAAAVRVALGDRHGSQARAAVRKTVLKGRQGGDYNLAHLLRRTRWGAGGGSSSLAQGFSVRDIVAAMEDPLQRGCCFRNVSSCFSDEAPSTVAQIKALAKRNHEHQTRTSDRLKGLELAVLNTLARLDAVSMEAAKVQHGYLAVQ 5342
SLPPVSPASA+SS RFV GVXXXXXX SH+RGMFS ++S TP GSEL YSPSPS+ K LQE +RQQR G+REL+A++A+S G+ F HR+ SN ++S RA G +G V+ + + E +D E IS V G H+ E I GDG GDG E +YK GDGND TLSD+ RH+ S+D GD DGLVGSSFL NFG DHGA+ATA GVSVG GG EGWA V L+A S R HPRI+PTH SP+ P+N + PP + SGLGGV L++SPGG G LDAFCSPLSEATAAAA S MT AA L T+VRFGGV DI+ANL RA+K QLV RDGEG SLLMHAAQRGET+VF VVLDILAEKLS QE +L EFC Q XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EGSR L EQLL SEDREKGSILE+VAMAGWLSRGP LQPA+LELLD+AWDELE +DD L+S G L L GL+ G R +R+ + LEKLVIQVL NLPVS AFNKRGIGGG S I SR++SFA MNS +S+V G XX RR G +S N T+G TG L G + + G G F+ RA+ESLLVA WVFEPESEAV MR AFEGPLA AL+MGW E V SP+VLDLLWAKLTAGVEL++ A +Q + + P PA AT PV++T XXXXXXXXXXXX R E + RSSP + A WDITIAP LQAVLV V +RP++FY VPAARLALD VVYL MLA+YT+ LYRVEPG IGP EVL+Y+WV+ MC S+V G G G T+ G A RQR +DY GD A DGEW F+ AL A+AAP LLF L++ A+FLP LGP VKA+ L AS+VLP+LAC+LLGTALALH +YG+GSPLLEGT L FV+GFRTFG++C TVARAG G+I+ PDEDVPYGE L+ LLY+ AAAGAL LVSI V VLSN K A PVEME FQL RAR+IV AAE SR N LP PFNLAQGGLAL+V A RR+AVSGACS+ GR +FW++L P A+ SA++LN+A+L FWW S KR+ + P A R++ LLRTT+ C + PLRL+ W AA V GD+ G +AR RK VLKGR+GGDY+L+HLLRRTRWGAGGGSSSLAQGFSVRDIVAAM+DPLQRG FRNV+SCF+DE PSTVAQ+KALAKRNHE++ R SDRLKGLE+AVL TLAR+DAVS E AKVQ YLA Q
Sbjct: 202 SLPPVSPASASSSVRFVAGVXXXXXXSSHQRGMFSMISSGTTPHGSELAYSPSPSAGDK-LQEAQRQQRVRLGSRELQATSAASAGAAKSFTRHRASSNSTSDSIS----RAGGSG----------RVGVVVGSGRAERTAEGNDVGSEVGSIGGISEVGAGXXXXSVHSG-----EGAAAI----GDGAGDG--ERLGDYKAGDGND-TLSDDGRHMGSED-GDTDGLVGSSFLTNFG---DHGAVATAAGVSVGVVGGGGAVEGWAPVRALRAPPRSYRHNHPRIQPTHVSPRVGPSNPPQKPPPADDSGLGGVQLLSSPGGTGALDAFCSPLSEATAAAAGSEMTHAAKLKTSVRFGGVGDIRANLGRADKQQLVSRDGEGVSLLMHAAQRGETDVFRVVLDILAEKLSEQEASCMLEEFCGQDEDGQTPLLFAARSGSGAVFRQALKALNARAPPEKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGSRLLKEQLLAGSEDREKGSILESVAMAGWLSRGPQLQPAVLELLDSAWDELERSVDDRLLVSAEQEAFQHAVRQRDLLGLSCVLSHGFRLSPVLIEGLVESCGPRCVRDCFLEAVASARNPLVPSLGLLSSVSTARKEASCPLHASWFLLMQNTLEKLVIQVLTNLPVSARAFNKRGIGGGRSNIFSRMNSFAPMNSGSSMVGAGXXXXXXXXXXXXXXXXXHRRFVKG--NSFNXXXXXXXXXXXXXXXXXXXXTNGTVTTGPHCGTVLLPGLGQEAGSGKAGDSRCGTVIFNARAKESLLVAEWVFEPESEAVGMRGAAFEGPLALALQMGWTELVCSPLVLDLLWAKLTAGVELDVHSCGANPAQVPVEKRAREGRRGMLARSAPAPAVTAAT----PVHNTAAXXXXXXXXXXXXXXXXATATRVERMDPARSSPGNSKHAAAS-WDITIAPSLQAVLVGVASRPDVFYRVPAARLALDAVVYLLMLAIYTVALYRVEPGSIGPWEVLLYIWVLSMCFSEVTTGAGGVVGDADTERREGGTPAEPLRQRR-----------------------------------------------------------------RDYRGD-----AVDGEWMCFQGFVALFASAAPLLLFRLLRGVAAFLPVLGPAVKAISLLAREASKVLPSLACLLLGTALALHVMYGDGSPLLEGTELSGGFVDGFRTFGVSCRTVARAGFGDIQVPDEDVPYGEPLYVLLYVFAAAGALALVSIYVGVLSNVKEASPVEMEKNFQLARARLIVRAAEASRRNVLPPPFNLAQGGLALVVSATQCHRHVSERRQAVSGACSVHGRFVFWLVLGPLAVASAMLLNLAALFYFWWFSVKRLFEDPRRAPRMLYVLLRTTLRCGVCAPLRLLGWWVAAVSCVLKGDKAGQRARTVARKAVLKGREGGDYHLSHLLRRTRWGAGGGSSSLAQGFSVRDIVAAMDDPLQRGGPFRNVTSCFADEGPSTVAQMKALAKRNHENEARISDRLKGLEVAVLGTLARMDAVSEETAKVQQEYLASQ 1704
BLAST of mRNA_P-fluviatile_contig16.2683.1 vs. uniprot
Match: D7FN03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN03_ECTSI) HSP 1 Score: 897 bits (2317), Expect = 1.140e-294 Identity = 567/991 (57.21%), Postives = 653/991 (65.89%), Query Frame = 3
Query: 2424 EEGSRELMEQLLMFSEDREKGSILEAVAMAGWLSRGPPLQPALLELLDAAWDELEWRLDDDSLISGG-SFLRAALRTGLLAGSRGLRESNLEKLVIQVLVNLPVSVLAFNKRGIGGGNS-ISSRLSSFARMNSNTSLVAGGVGGGXXSGYSRSRRLQGGALSSANTSAGVQAATGFLDLRRAFGG-------TSGVNPTGASWSGALPAGGSKHDWGSRRGSESGGCAGFSIRARESLLVAGWVFEPESEAVEMRSGAFEGPLASALRMGWVEFVRSPIVLDLLWAKLTAGVELEIRPTAAEVSQWYPSIAPPTPAGETATA--DAAPVNSTTXXXXXXXXXXXXXM-----ARGEGGEARRSSPDSLNGVFAGGWDITIAPLLQAVLVEVVARPELFYGVPAARLALDIVVYLCMLAVYTILLYRVEPGGIGPLEVLVYVWVIGMCVSQVGEGT--EAGGGHTKSHCGKPAANSKRQRHVQRTRPKERQLXXXXXXXXXXXXXXXXXXXXXXXXNRLRSPPFLYGRLATVVLVAAFLCRVGDLSQDYGGDGRATAAADGEWRFFEASFALLAAAAPFLLFGLVQAAASFLPCLGPTVKAVDQLGLVASRVLPALACILLGTALALHALYGEGSPLLEGTNLPEEFVEGFRTFGLACGTVARAGLGEIRPPDEDVPYGEALHALLYIVAAAGALCLVSILVAVLSNSKAACPVEMENQFQLNRARVIVSAAEVSRTNRLPAPFNLAQGGLALMVWAAGLCCGAPNRRKAVSGACSLFGRCIFWVILSPCALMSAIILNVASLLCFWWVSWKRVLDIPHEAARVMAALLRTTIWCCLGVPLRLVILWAAAAVRVALGDRHGSQARAAVRKTVLKGRQGGDYNLAHLLRRTRWGAGGGSSSLAQGFSVRDIVAAMEDPLQRGCCFRNVSSCFSDEAPSTVAQIKALAKRNHEHQTRTSDRLKGLELAVLNTLARLDAVSMEAAKVQHGYLAVQ 5342
EEGSR L EQLL SEDREKGSILE+VAMAGWLSRGP LQPA+LELLD+AWDELE LDD L+SG LRAALR GLL GS G + LEKLV+QVL NLPVS AFNKRGIGGG S I SR+ S+V G XX T+G+ G L AG + + G G F+ RA+ESLLVA WVFEPESEAV MR AFEGPLA AL+MGW E V SP+VLDLLWAKLTAGVEL++ A +QWY + P+ A A A PV++T XXXXXXXXXXXXX R EG + RRSSP L A WDITIAP LQAVLV V P++FY VPAARLALD VVYL MLA+YT+ LYRVEPG + P EVL+Y+WV+ MC S+V G G T G AA QRH + K L S PF G+ +TVVL+AA +CR+GD QD GGD A DGEWR F+ ALLA+AAP LLF L+ A+FLP LGPTVKA+ L AS+VLP+LAC+LLGTALALH +YG+GSPLLEGT LP V+GFRTFG++C TVARAG G+I+ DEDVPYGE L+ LLY+ AAAGAL LVSILV VLSN K A PVEME FQL RAR+IV AAE SR N LP PFNLAQGGLAL+V A RR+AVSGACS+ GR +FW++L P AL SA++LN+A+L CFWW S KR+ + P A R++ LL TT+ C + PLRL+ W AA V GD+ G +AR AVRK VLKGR+GGDY+L+HLLRRTRWGAGGGSSSLAQGFSVRDI AAM+DPLQRG FRNVSSCF+DE PSTVAQ+KALAKRNHE++ R SDRLKGLE+AVL TLAR+DAVS E AKVQ YLA Q
Sbjct: 39 EEGSRLLKEQLLAGSEDREKGSILESVAMAGWLSRGPQLQPAVLELLDSAWDELERSLDDRLLVSGARGVLRAALREGLLPGSCGFGQKTLEKLVLQVLTNLPVSARAFNKRGIGGGRSNIFSRMXXXXXXXXGASMVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNGMVTMGPHCGTVLLAGLGQEAGSGKAGDSRRGAVIFNARAKESLLVAEWVFEPESEAVGMRGAAFEGPLALALQMGWTELVCSPLVLDLLWAKLTAGVELDVHSCGANPAQWYARLPGPSAGSAPAPAVTAATPVHNTAXXXXXXXXXXXXXXXXXXATRVEGVDPRRSSPGHLKNAAAS-WDITIAPSLQAVLVGVATGPDVFYRVPAARLALDAVVYLLMLAIYTVALYRVEPGSVDPWEVLLYIWVLSMCFSEVATGVWGVVGDADTDPREGGTAAEPLGQRHRVKRSRKRGSLCSC-------------------------SSPFFGGKFSTVVLMAAMMCRLGDYVQDSGGD-----AVDGEWRCFQGFVALLASAAPLLLFRLLGGVAAFLPVLGPTVKAISLLAREASKVLPSLACLLLGTALALHVMYGDGSPLLEGTELPGGSVDGFRTFGVSCRTVARAGFGDIQVLDEDVPYGEPLYVLLYVFAAAGALGLVSILVGVLSNLKEASPVEMEKNFQLARARLIVRAAEASRRNVLPPPFNLAQGGLALVVSATQCHRHVSERRQAVSGACSVHGRFVFWLVLGPLALASAMLLNLAALFCFWWFSVKRLFEDPRRAPRMLYVLLCTTLCCGVCAPLRLLGWWVAAVSCVLKGDKVGQRARTAVRKAVLKGREGGDYHLSHLLRRTRWGAGGGSSSLAQGFSVRDIAAAMDDPLQRGGPFRNVSSCFADEGPSTVAQMKALAKRNHENEARISDRLKGLEVAVLGTLARMDAVSEETAKVQQEYLASQ 998
BLAST of mRNA_P-fluviatile_contig16.2683.1 vs. uniprot
Match: D7FHF4_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF4_ECTSI) HSP 1 Score: 290 bits (741), Expect = 7.950e-76 Identity = 212/390 (54.36%), Postives = 249/390 (63.85%), Query Frame = 3
Query: 924 MFS-VASYATP-GSELMYSPSPSSASKELQETKRQQRALGGARELRASAASSTGSVGGFAHHRSDSNYGNESNEHGEDRASVGGDXXXXXXXXXXIGSVISINKGDGREENSDHSGEGVDDDEISTVSRGSLLVGGHTTAVKRQEIPTVIIPTDGDGGDGGSEAPEEYKLGDGNDETLSDNSRHLESDDDGDCDGLVGSSFLGNFGSFGDHGAIATADGVSVGTFAGGA--EGWARVAGLKARGLSSR-THPRIRPTHASPKAKPANASRNPP--NGSGLGGVALVTSPGGAGVLDAFCSPLSEATAAAADSGMTQAANLATAVRFGGVSDIQANLARAEKSQLVGRDGEGASLLMHAAQRGETEVFGVVLDILAEKLSPQEVLAEFCAQ 2072
MFS ++S TP GSEL YSPSPS+ K LQE +RQQR G+REL+A++A+S GS F HR+ SN ++S S GG +G V+ + + E +D S E IS V H+ E I GDGG G E +YK GDGND LSD+ RH+ S+D GD DGLVGSSFL NFG DHGA+ATA GVSVG GG EGWA + L+A S R HPRI+PTH SP+ P+N + PP + SGLG V +++SPGG G LDAFCSPLSEATAAAA S MTQAA L T+VRFGGV DI+ANL RA+K QLV RDGEG SLLMHAAQRGET+VF VVLDILAEKLS QEVL EFC Q
Sbjct: 1 MFSMISSGTTPYGSELAYSPSPSAGDK-LQEAQRQQRVRLGSRELQAASAASAGSAKSFTRHRASSNSTSDS-------ISRGGSGR--------VGVVVGSGRAERTSEGNDMSSEVGSIGGISEVXXXXXXXXVHSG-----EGAAAI----GDGG-GDGERLGDYKAGDGND-ALSDDGRHMGSED-GDTDGLVGSSFLTNFG---DHGAVATAAGVSVGVVGGGGAVEGWAPIRALRAPPRSYRHNHPRIQPTHVSPRVGPSNPPQKPPPADDSGLGRVQILSSPGGTGALDAFCSPLSEATAAAAGSEMTQAAKLKTSVRFGGVGDIRANLGRADKPQLVSRDGEGVSLLMHAAQRGETDVFRVVLDILAEKLSEQEVLEEFCGQ 359
BLAST of mRNA_P-fluviatile_contig16.2683.1 vs. uniprot
Match: D8LM43_ECTSI (Ankyrin repeat Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM43_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 1.460e-5 Identity = 128/550 (23.27%), Postives = 212/550 (38.55%), Query Frame = 3
Query: 3126 VFEPESEAVEMRSGAFEGPLASALRMGWVEFVRSPIVLDLLWAKLTAGVELEIRPTAAEVSQWYPSIAPPTPAGETATADAAPVNSTTXXXXXXXXXXXXXMARGEGGEARRSSPDSLNGVFAGGWDITIAPLLQAVLVEVVARPELFYGVPAARLALDIVVYLCMLAVYTILLYRV-EPGGIGPLEVLVYVWVIGMCVSQVGEGTEAGGGHTKSHCGKPAANSKRQRHVQRTRPKERQLXXXXXXXXXXXXXXXXXXXXXXXXNRLRSPPFLYGRLATVVLVAAFLCRVGDLSQDYGGDGRATAAADGEWRFFEASFALLA-----AAAPFLL---FGLVQAAASFLPCLGPTVKAVDQLGLVASRVLPALACILLGTALALHALYGEGSPLL-EGTNLPEEFVEGFRTFGLACGTVARAGLGEIR-PPDEDVPYGEALHALLYIVAAAGALCLVSILVAVLSNSKAACPVEMENQFQLNRARVIVSAAEVSRTNRLPAPFNLAQGGLALMVWAAGLCCGAPNRRKAVSGACSLFGRCIFWVILSPCAL 4742
+ EPE ++ R A GPLA A++ V+F+ +P+V+D L K +AG+ R T W + V+ + +GG PDS + W T P LQ +L V + F+GVPA RLALD++VY +++V+ + + + + G I +VL V+++G QV E EAG + H L +P + L AF R+ D G+ + G E + LA A+APF+L L Q +S P + + L +R + I LG ALA +A++G S L +G ++ E + T+ + T+ + LG + P EA L+ + L+++L+A+L+ + A + + L+ A +I R + LP+P N+ Q ++ ++W R K V F R +FW++ P A+
Sbjct: 534 MLEPELAGLQPRDCA--GPLAQAMQSRHVDFIYTPLVVDYLRLKFSAGLPNPFRET-----DWR--------------REHGRVDRNLARFMVNEDESQLMVYILQGG-----CPDSPS------W--TYLPGLQFILAGVAGKTAAFFGVPAMRLALDVLVYTGVVSVFVLKVVVLRDVGRITAWDVLWLVYLVGAIWKQVHEVQEAGS--LRVH--------------------------------------------------LFNPWNVVEATKLASLSTAFFFRMHAWVCDGHGEYFCGQLSTGSGSVNELNEVYLAQYFQAASAPFVLGKVLFLTQVHSSLGPLMHSAFNVIGDL----TRFGALMLVITLGFALAFYAMFGSMSASLPDGGDIAE-----YDTYYSSILTLFSSMLGNFSFEVFKGAPMAEAGEVLMVFFLCVMNITLLNLLIAILATAHARLEGNADKEAVLSEAVIITQYRRAMRLDSLPSPLNVPQELISCVLWR------HKERAKEV------FARAVFWLVSGPIAI 976 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig16.2683.1 >prot_P-fluviatile_contig16.2683.1 ID=prot_P-fluviatile_contig16.2683.1|Name=mRNA_P-fluviatile_contig16.2683.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1482bp MFSVASYATPGSELMYSPSPSSASKELQETKRQQRALGGARELRASAASSback to top mRNA from alignment at P-fluviatile_contig16:826638..848681- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig16.2683.1 ID=mRNA_P-fluviatile_contig16.2683.1|Name=mRNA_P-fluviatile_contig16.2683.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=22044bp|location=Sequence derived from alignment at P-fluviatile_contig16:826638..848681- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig16:826638..848681- >mRNA_P-fluviatile_contig16.2683.1 ID=mRNA_P-fluviatile_contig16.2683.1|Name=mRNA_P-fluviatile_contig16.2683.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=8892bp|location=Sequence derived from alignment at P-fluviatile_contig16:826638..848681- (Porterinema fluviatile SAG_2381)back to top |