mRNA_P-fluviatile_contig16.2663.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig16.2663.1 vs. uniprot
Match: D7FMX5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMX5_ECTSI) HSP 1 Score: 271 bits (693), Expect = 7.160e-81 Identity = 170/261 (65.13%), Postives = 193/261 (73.95%), Query Frame = 1
Query: 865 MKFLRRESERGDYTPSEAKRLP-PSQAASSRRLTTGDSVTGSLXXXXXXXXXXXXVPRSASP-SVVSTSGHMISDTSSITTQTPDNVIGETLVVQGRVEFKNLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSCQKMQIRFAGCVTGNLQCASLGMDPSVVLKGSANINPREKVEKHRSKTSAPRHKS-SRSQGRSTEDGSSRGPHSAGSPDAP-------EMQKQRRKGSGSVERSEAVRPEGG 1617
MKF RRESERGD+ + + + P Q ASS+R V+ + +P +++P S ST G+ SDT++ITTQTPDNVIGETLVVQGRVEF+NLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSC KMQIRFAGCVTGNL CASLGMDPSVVLKGSANINPREKVEK +SK++APRHK SRSQ RS ED SSR S SP++ + QK+R SG + R E RPE G
Sbjct: 2 MKFRRRESERGDFQQAGQQDVGRPPQPASSKR------VSDAFQASPEPTPVAVPIPATSAPQSTASTPGNKSSDTTTITTQTPDNVIGETLVVQGRVEFQNLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSCNKMQIRFAGCVTGNLICASLGMDPSVVLKGSANINPREKVEKTKSKSAAPRHKQGSRSQTRSAEDTSSRASTSVLSPESVGSRGSTYDKQKRRASESGDL-RPEGTRPEVG 255
BLAST of mRNA_P-fluviatile_contig16.2663.1 vs. uniprot
Match: F0Y5F7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5F7_AURAN) HSP 1 Score: 100 bits (249), Expect = 3.270e-18 Identity = 44/103 (42.72%), Postives = 74/103 (71.84%), Query Frame = 1
Query: 1108 PDNVIGETLVVQGRVEFKNLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSCQKMQIRFAGCVTGNLQCASLGMDPSVVLKGSANINP 1416
P+ VIGETL ++G++ F+ LLR+DG FEGELI G LI+GP E++ +++ ++++ V G +IG+ + ++++ + + G++ C L MDP+VVL G+ NINP
Sbjct: 359 PETVIGETLSIEGKLRFERLLRLDGKFEGELISEGDLIVGPQGELVGDVKTMSDIVVFGKVIGNIAVDRVELCGSASIYGDITCKVLLMDPTVVLVGNLNINP 461
BLAST of mRNA_P-fluviatile_contig16.2663.1 vs. uniprot
Match: A0A6M1ZQA3_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1ZQA3_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 1.110e-13 Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 1
Query: 1108 PDNVIGETLVVQGRVEFKNLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSC-QKMQIRFAGCVTGNLQCASLGMDPSVVLKGSANINPRE 1422
P+ +GE + G ++F LLRIDG FEGELI G +I+GP +V +NL L ++G + G+ +C +++++R VTG++Q L +D V + G+ + PRE
Sbjct: 66 PETTLGEGVTFNGELKFDRLLRIDGTFEGELISEGKVIVGPKGKVKANLN-LKAAIIQGEVEGNITCKERVELRDEAVVTGDIQAKLLSVDEGVTIVGNVLVTPRE 170
BLAST of mRNA_P-fluviatile_contig16.2663.1 vs. uniprot
Match: A0A212KW08_9CHLA (Uncharacterized protein n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KW08_9CHLA) HSP 1 Score: 80.1 bits (196), Expect = 4.400e-13 Identity = 41/110 (37.27%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 1087 SSITTQTPDNVIGETLVVQGRVEFKNLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSCQ-KMQIRFAGCVTGNLQCASLGMDPSVVLKGSANIN 1413
S+++ + PD +GE +V +G + FK LLRIDG FEG+L+ +G LI+GPT V SN+R ++E +EG + G+ + Q ++++R V G+++ L +D V + G ++
Sbjct: 114 STLSAEEPDTTLGEGVVFKGELTFKRLLRIDGQFEGDLVSDGKLIVGPTGIVKSNVR-MHEAIIEGRVEGNITVQERLELRCNAQVIGDIKAKQLSVDEGVSIVGHVAVS 222
BLAST of mRNA_P-fluviatile_contig16.2663.1 vs. uniprot
Match: A0A7Y3IS56_9BACT (Polymer-forming cytoskeletal protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A7Y3IS56_9BACT) HSP 1 Score: 77.8 bits (190), Expect = 5.410e-13 Identity = 45/115 (39.13%), Postives = 67/115 (58.26%), Query Frame = 1
Query: 1075 ISDTSSITTQTPDNVIGETLVVQGRVEFKNLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSC-QKMQIRFAGCVTGNLQCASLGMDPSVVLKGSANINP 1416
I +TSS Q P+ VIGE + ++G + F LLRIDG+FEG L+ G LI+GP V +N+ L E Y+ G + GD + +++ +R V GN+ L +D V + G N+ P
Sbjct: 39 IEETSS--NQDPETVIGEQVTIKGELCFTTLLRIDGNFEGTLVSQGKLIVGPNGSVKANID-LEEAYISGKVEGDITVKERLHLRGRAEVHGNITAKLLSVDEGVSIFGHVNVPP 150
BLAST of mRNA_P-fluviatile_contig16.2663.1 vs. uniprot
Match: E1QGE6_DESB2 (Uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / LMG 7858 / VKM B-1802 / 2st14) TaxID=644282 RepID=E1QGE6_DESB2) HSP 1 Score: 65.5 bits (158), Expect = 4.970e-9 Identity = 31/99 (31.31%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 1117 VIGETLVVQGRVEFKNLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSC-QKMQIRFAGCVTGNLQCASLGMDPSVVLKGSANI 1410
++G ++G++ FK R+DG F+GE++G G+LI+GP A V + + V + G+++GD +++++R G + GN+ + MD VV +G+ +
Sbjct: 15 LLGGASNIEGKLNFKGQARLDGVFKGEIVGEGTLIVGPGANVEARILA-TAVEISGVVVGDIEATERIELRAPGKLVGNIVAPLVVMDEGVVFEGNCRM 112
BLAST of mRNA_P-fluviatile_contig16.2663.1 vs. uniprot
Match: A0A848ZG50_9DELT (Polymer-forming cytoskeletal protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A848ZG50_9DELT) HSP 1 Score: 65.5 bits (158), Expect = 5.760e-9 Identity = 32/103 (31.07%), Postives = 65/103 (63.11%), Query Frame = 1
Query: 1120 IGETLVVQGRVEFKNLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSCQ-KMQIRFAGCVTGNLQCASLGMDPSVVLKGSANINPREK 1425
IG+ +G+++F +RIDGHF GE++G G+LI+G A + +++ +++++ G + GD + K++IR G + GN+Q S+ ++ ++G+ ++ EK
Sbjct: 11 IGKDTEFEGKLKFYGTIRIDGHFRGEIMGEGTLIVGEGAIIEADIH-VSQIFNSGRIQGDVAADHKIEIRAPGKILGNIQAPSIVINEGATIEGNCRMHGVEK 112
BLAST of mRNA_P-fluviatile_contig16.2663.1 vs. uniprot
Match: A0A521SZ95_9CHLR (Polymer-forming cytoskeletal protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A521SZ95_9CHLR) HSP 1 Score: 65.1 bits (157), Expect = 9.290e-9 Identity = 34/106 (32.08%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 1114 NVIGETLVVQGRVEFKNLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSCQKMQIRFAGCVTGNLQCASLGMDPSVVLKGSANINPREKVE 1431
+V+G+ +VV G++ + +RI+G FEGE+ NG L++G T V V V G L GD + +K++IR G V GN+ + + L+G + R +++
Sbjct: 23 SVLGDGVVVHGKITGRGGVRIEGAFEGEIALNGMLVVGTTGRVTCPHLQAQTVIVAGALRGDITAEKVEIRSTGRVWGNVVTVAFSTEEGAYLRGQIQMEDRVELD 128
BLAST of mRNA_P-fluviatile_contig16.2663.1 vs. uniprot
Match: A0A090YS88_PAEMA (Polymer-forming cytoskeletal family protein n=3 Tax=Paenibacillus TaxID=44249 RepID=A0A090YS88_PAEMA) HSP 1 Score: 64.7 bits (156), Expect = 1.120e-8 Identity = 39/103 (37.86%), Postives = 61/103 (59.22%), Query Frame = 1
Query: 1111 DNVIGETLVVQGRVEFKNLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSCQ-KMQIRFAGCVTGNLQCASLGMDPSVVLKGSANINP 1416
D +IG+ ++G++E K+ LR++G F GE+ G ++IG T E SN++G EV V G ++GD S + K+ I G V GN+ A L + L GS+ + P
Sbjct: 13 DTLIGQGSSIEGKLECKSNLRLEGKFSGEIECLGQVVIGETGEARSNIQG-GEVVVAGKVVGDISTRGKLTITGNGQVDGNVDVAKLIILEGGQLNGSSKMEP 114
BLAST of mRNA_P-fluviatile_contig16.2663.1 vs. uniprot
Match: A0A4R6Y8H8_9BURK (Cytoskeletal protein CcmA (Bactofilin family) n=1 Tax=Hydromonas duriensis TaxID=1527608 RepID=A0A4R6Y8H8_9BURK) HSP 1 Score: 62.4 bits (150), Expect = 5.640e-8 Identity = 35/116 (30.17%), Postives = 60/116 (51.72%), Query Frame = 1
Query: 1096 TTQTPDNVIGETLVVQGRVEFKNLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSCQKMQIRFAGCVTGNLQCASLGMDPSVVLKGSANI-----NPREKV 1428
T++T VIGE + G V+ K ++IDG G L NG +++G + ++ NEV V G + G +Q++ + + GN++ +L +DP V +G+ + NP E V
Sbjct: 11 TSRTYTTVIGEDCTINGHVDTKAYIKIDGQILGNLSANGGVVLGEKGYIKGDINS-NEVTVYGRVDGHVHANSLQLKNSSTIVGNIETKTLQIDPGAVYQGNVTMHVKTDNPTEPV 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig16.2663.1 >prot_P-fluviatile_contig16.2663.1 ID=prot_P-fluviatile_contig16.2663.1|Name=mRNA_P-fluviatile_contig16.2663.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=316bp MKFLRRESERGDYTPSEAKRLPPSQAASSRRLTTGDSVTGSLTGSHSGSPback to top mRNA from alignment at P-fluviatile_contig16:577227..583969- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig16.2663.1 ID=mRNA_P-fluviatile_contig16.2663.1|Name=mRNA_P-fluviatile_contig16.2663.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6743bp|location=Sequence derived from alignment at P-fluviatile_contig16:577227..583969- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig16:577227..583969- >mRNA_P-fluviatile_contig16.2663.1 ID=mRNA_P-fluviatile_contig16.2663.1|Name=mRNA_P-fluviatile_contig16.2663.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1896bp|location=Sequence derived from alignment at P-fluviatile_contig16:577227..583969- (Porterinema fluviatile SAG_2381)back to top |