mRNA_P-fluviatile_contig16.2662.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig16.2662.1
Unique NamemRNA_P-fluviatile_contig16.2662.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig16.2662.1 vs. uniprot
Match: A0A6H5JQE4_9PHAE (DUF775 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQE4_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 3.190e-89
Identity = 147/197 (74.62%), Postives = 157/197 (79.70%), Query Frame = 2 
Query: 1334 MSITAAIPFGVIAPGRAVTTEFRAIDSSKCVTEISNPREVDEIVFFLLPNSPVPPGHAAVLYFSVPSPS-GIFEHWEVLGAVGFQKPSGVFRTSWPTNEDMKSTAVVQLGVSIETEDVVDNLQLGTGGVQDRKQFALKIANDLFQARRYSSCERFMSSFSQATPAGPEVMVVPTNVLDRWIQRFEHKYNRDPNFMLK 1921
            MS+  A+PFG+I PGR V  EFRAIDSSKCV EI NPREVDE+VFFLLP SPVPPG  AVLYFSVPS + G FEHWEVLGA+   KPSGVFRT WPTNE M+S AVVQLGVSIE+ED   NL L  GGVQDRK FALKIA DLFQ         FMSSFSQ+T AGPE+MVVPTNVLDRWI RFE KYNRDPNFMLK
Sbjct:    1 MSVAPAVPFGIIVPGRPVIPEFRAIDSSKCVAEIVNPREVDELVFFLLPTSPVPPGQTAVLYFSVPSATTGAFEHWEVLGALAASKPSGVFRTGWPTNEQMQSCAVVQLGVSIESEDTATNLGLSAGGVQDRKNFALKIAKDLFQ---------FMSSFSQSTQAGPELMVVPTNVLDRWILRFESKYNRDPNFMLK 188
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BLAST of mRNA_P-fluviatile_contig16.2662.1 vs. uniprot
Match: A0A7S2V1Q5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Q5_9STRA)

HSP 1 Score: 197 bits (502), Expect = 2.410e-55
Identity = 101/188 (53.72%), Postives = 133/188 (70.74%), Query Frame = 2 
Query: 1358 FGVIAPGRAVTTEFRAIDSSKCVTEISNPREVDEIVFFLLPNSPVPPGHAAVLYFSVPSPSGIFEHWEVLGAVGFQKPSGVFRTSWPTNEDMKSTAVVQLGVSIETEDVVDNLQLGTGGVQDRKQFALKIANDLFQARRYSSCERFMSSFSQATPAGPEVMVVPTNVLDRWIQRFEHKYNRDPNFMLK 1921
            FG++ PGR V T FR I  +K V +I NP+E+ ++ FF LPN  +P G + +LY+S P+P   F++W VLGA+   KPSGVFRT W TNE ++  + +QLGVSIE+ DV+ NL L   GV+DRKQFA KIA DLFQ         FM+SFSQ++  G E+MV+PTN+LDRW++RFE KY  DPNFM+K
Sbjct:   40 FGLLVPGRPVQTAFRQILETKFVADILNPQEISDVCFFTLPNFVIPEGFSVILYYS-PAP---FDNWSVLGALSTAKPSGVFRTGWATNESLRGASHLQLGVSIESVDVMKNLNLDETGVEDRKQFAHKIALDLFQ---------FMASFSQSSSQGGELMVIPTNILDRWMERFEQKYRVDPNFMMK 214
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BLAST of mRNA_P-fluviatile_contig16.2662.1 vs. uniprot
Match: A0A024TK25_9STRA (DUF775 domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TK25_9STRA)

HSP 1 Score: 187 bits (476), Expect = 4.090e-52
Identity = 98/188 (52.13%), Postives = 129/188 (68.62%), Query Frame = 2 
Query: 1358 FGVIAPGRAVTTEFRAIDSSKCVTEISNPREVDEIVFFLLPNSPVPPGHAAVLYFSVPSPSGIFEHWEVLGAVGFQKPSGVFRTSWPTNEDMKSTAVVQLGVSIETEDVVDNLQLGTGGVQDRKQFALKIANDLFQARRYSSCERFMSSFSQATPAGPEVMVVPTNVLDRWIQRFEHKYNRDPNFMLK 1921
            FG +  GR V T++  I  ++ V +I  P +V +I FF+LP SPVPPG AAVLYF+VP      ++W++LG+V  +KPS +FRT+WPT+ D+    V+QLGVSIE+ D V NL +   G+++RK FALKIA DLF          FMSSFS  T +   +MVVPTN+LDRWI+RFE KY RDPNFM+K
Sbjct:    5 FGTVIAGRPVITDYIEISPTQFVVDIPYPEQVTDITFFMLPQSPVPPGFAAVLYFAVPH----LQNWQLLGSVFAEKPSAIFRTAWPTHPDVVGQPVIQLGVSIESADNVRNLGIEASGLEERKSFALKIAMDLFN---------FMSSFS--TSSNSNMMVVPTNLLDRWIERFESKYRRDPNFMMK 177
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BLAST of mRNA_P-fluviatile_contig16.2662.1 vs. uniprot
Match: T0SBJ9_SAPDV (DUF775 domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0SBJ9_SAPDV)

HSP 1 Score: 186 bits (472), Expect = 1.530e-51
Identity = 96/188 (51.06%), Postives = 130/188 (69.15%), Query Frame = 2 
Query: 1358 FGVIAPGRAVTTEFRAIDSSKCVTEISNPREVDEIVFFLLPNSPVPPGHAAVLYFSVPSPSGIFEHWEVLGAVGFQKPSGVFRTSWPTNEDMKSTAVVQLGVSIETEDVVDNLQLGTGGVQDRKQFALKIANDLFQARRYSSCERFMSSFSQATPAGPEVMVVPTNVLDRWIQRFEHKYNRDPNFMLK 1921
            FG++  GR V T+F  I  ++ V ++  P +V +I FFLLP+SPVPPG+AAVLYF+VP      ++W++LG+V  +KPS +FRTSWPT+ D+ +  ++Q+GVSIE  D V NL +   G+ +RK FA KIA DLF          FMSSFS +T     +MV+PTN+LDRWI+RFE KY RDPNFM+K
Sbjct:    4 FGMVIAGRPVVTDFAEISPTQFVVDVPYPEQVTDITFFLLPHSPVPPGYAAVLYFAVPH----LQNWQLLGSVFAEKPSAIFRTSWPTHPDVANQPIIQVGVSIEPVDNVKNLGIEASGLTERKAFAHKIAVDLFN---------FMSSFSTSTDRS--LMVIPTNLLDRWIERFEAKYRRDPNFMMK 176
[Close]
BLAST of mRNA_P-fluviatile_contig16.2662.1 vs. uniprot
Match: K3X1K5_GLOUD (DUF775 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1K5_GLOUD)

HSP 1 Score: 187 bits (475), Expect = 4.040e-51
Identity = 100/188 (53.19%), Postives = 126/188 (67.02%), Query Frame = 2 
Query: 1358 FGVIAPGRAVTTEFRAIDSSKCVTEISNPREVDEIVFFLLPNSPVPPGHAAVLYFSVPSPSGIFEHWEVLGAVGFQKPSGVFRTSWPTNEDMKSTAVVQLGVSIETEDVVDNLQLGTGGVQDRKQFALKIANDLFQARRYSSCERFMSSFSQATPAGPEVMVVPTNVLDRWIQRFEHKYNRDPNFMLK 1921
            FG++  GR V T+FR I     V EI +P  V ++ FFLLPNSPVPPG+ AVLYF+VPS     ++W++LG V  +KPS +FRT WPT+ D+    V+QLGVSIE+ D V NL +   G  +RK+FALKIA DLF          +MSSFS +T      M +PTN+LDRWI+RFE KY RDPNFMLK
Sbjct:   67 FGLVIAGRPVLTDFREIGPMHYVVEIGDPTLVADLTFFLLPNSPVPPGYGAVLYFAVPS----LQNWQLLGTVFAEKPSAIFRTGWPTHPDVVGQPVLQLGVSIESLDNVKNLGIEASGFAERKEFALKIAMDLFN---------YMSSFSTST--NQAYMTIPTNLLDRWIERFEAKYKRDPNFMLK 239
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BLAST of mRNA_P-fluviatile_contig16.2662.1 vs. uniprot
Match: A0A5D6XTY2_9STRA (DUF775 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTY2_9STRA)

HSP 1 Score: 184 bits (468), Expect = 6.450e-51
Identity = 97/188 (51.60%), Postives = 126/188 (67.02%), Query Frame = 2 
Query: 1358 FGVIAPGRAVTTEFRAIDSSKCVTEISNPREVDEIVFFLLPNSPVPPGHAAVLYFSVPSPSGIFEHWEVLGAVGFQKPSGVFRTSWPTNEDMKSTAVVQLGVSIETEDVVDNLQLGTGGVQDRKQFALKIANDLFQARRYSSCERFMSSFSQATPAGPEVMVVPTNVLDRWIQRFEHKYNRDPNFMLK 1921
            FG++  GR V T+F  ID +     I +P  V ++ FFLLPNSPVPPG+ AVLYF+VPS     ++W++LG V  +KPS +FRT WPT+ D+    VVQLGVSIE+ D V NL +   G+ +R++FALKIA DLF          FM+SFS +T      M +PTN+LDRW++RFE KY RDPNFMLK
Sbjct:    8 FGLVIAGRPVHTDFIEIDPAHYTLSIGDPTAVTDLTFFLLPNSPVPPGYGAVLYFAVPS----LQNWQLLGTVFAEKPSAIFRTGWPTHPDLLGQPVVQLGVSIESLDNVKNLGIEASGLAERREFALKIAMDLFN---------FMTSFSTST--NQAYMTIPTNLLDRWMERFEAKYKRDPNFMLK 180
[Close]
BLAST of mRNA_P-fluviatile_contig16.2662.1 vs. uniprot
Match: A0A1V9ZVR6_9STRA (DUF775 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVR6_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.090e-49
Identity = 96/188 (51.06%), Postives = 129/188 (68.62%), Query Frame = 2 
Query: 1358 FGVIAPGRAVTTEFRAIDSSKCVTEISNPREVDEIVFFLLPNSPVPPGHAAVLYFSVPSPSGIFEHWEVLGAVGFQKPSGVFRTSWPTNEDMKSTAVVQLGVSIETEDVVDNLQLGTGGVQDRKQFALKIANDLFQARRYSSCERFMSSFSQATPAGPEVMVVPTNVLDRWIQRFEHKYNRDPNFMLK 1921
            FG++  GR V T+F  +  ++ V +I  P +V +I FFLLP+SPVPPG AAVLYF+VP      ++W++LG+V  +KPS +FRTSWPT+ D+ +  VVQLG+SIE+   V NL +   G+ +RK FA KIA DLF          FMSSFS +T     +MV+PTN+LDRW++RFE KY RDPNFM+K
Sbjct:    4 FGMVIAGRPVLTDFAELSPTQYVIDIPYPAQVTDITFFLLPHSPVPPGFAAVLYFAVPQ----LQNWQLLGSVFAEKPSAIFRTSWPTHPDVVNQPVVQLGISIESLANVKNLGIEESGLMERKAFAHKIALDLFN---------FMSSFSTSTDRS--LMVIPTNLLDRWMERFEAKYRRDPNFMMK 176
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BLAST of mRNA_P-fluviatile_contig16.2662.1 vs. uniprot
Match: A0A835ZAF1_9STRA (DUF775 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAF1_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.940e-49
Identity = 94/197 (47.72%), Postives = 127/197 (64.47%), Query Frame = 2 
Query: 1334 MSITAAIPFGVIAPGRAVTTEFRAIDSSKCVTEISNPREVDEIVFFLLPNSPVPPGHAAVLYFSVPSPSGIFEHWEVLGAVGFQKPSGVFRTSWPTNEDMKSTAVVQLGVSIETEDVVDNLQLGTGGVQDRKQFALKIANDLFQARRYSSCERFMSSFSQATPAGP-EVMVVPTNVLDRWIQRFEHKYNRDPNFMLK 1921
            M+ T  +PFG++  GR + +EFR +D++K   E+  P +V E+VFFLLP SP+PPG  A LY+S P     F++WE +GAV    PS + RT WPT+E ++   +VQLGVSIE+ D ++NL+       DR+ FAL++A DLF         RF+SSFS     G  E++V P NVLDRWI RFE KY RDPNF+ K
Sbjct:    1 MAQTPVVPFGIVIEGRPLISEFRVVDATKAAVEVQYPVQVAELVFFLLPTSPLPPGTGAALYYSAPR----FQNWEYIGAVEPAAPSAILRTGWPTDEALQQCPMVQLGVSIESLDTINNLKAAGSRDGDRRFFALQVARDLF---------RFISSFSTTQNTGEQELLVAPANVLDRWIARFEAKYARDPNFIFK 184
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BLAST of mRNA_P-fluviatile_contig16.2662.1 vs. uniprot
Match: A0A8K1CEH9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEH9_PYTOL)

HSP 1 Score: 180 bits (456), Expect = 3.000e-49
Identity = 93/188 (49.47%), Postives = 125/188 (66.49%), Query Frame = 2 
Query: 1358 FGVIAPGRAVTTEFRAIDSSKCVTEISNPREVDEIVFFLLPNSPVPPGHAAVLYFSVPSPSGIFEHWEVLGAVGFQKPSGVFRTSWPTNEDMKSTAVVQLGVSIETEDVVDNLQLGTGGVQDRKQFALKIANDLFQARRYSSCERFMSSFSQATPAGPEVMVVPTNVLDRWIQRFEHKYNRDPNFMLK 1921
            FG++  GR V T+F+ I   + +TEI  P +V ++ FFLLPNSPVP G+ AVLYF+VP+     ++W++LG V  +KPS +FRT WPT+ D+    V+QLG+SIE  D V NL +   G+ +RK FALKIA DLF          +M+SFS +       M +PTN+LDRW++RFE KY RDPNFMLK
Sbjct:    6 FGLVIAGRPVFTDFQEIGPGRYMTEIPEPTQVTDLTFFLLPNSPVPMGYGAVLYFAVPA----LQNWQLLGTVFAEKPSAIFRTGWPTHPDVAGQPVLQLGISIEPLDNVKNLGIEASGLVERKAFALKIAQDLFN---------YMTSFSTSNTTA--YMTIPTNLLDRWMERFEAKYKRDPNFMLK 178
[Close]
BLAST of mRNA_P-fluviatile_contig16.2662.1 vs. uniprot
Match: D0N9M8_PHYIT (DUF775 domain-containing protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=D0N9M8_PHYIT)

HSP 1 Score: 180 bits (456), Expect = 3.510e-49
Identity = 92/188 (48.94%), Postives = 126/188 (67.02%), Query Frame = 2 
Query: 1358 FGVIAPGRAVTTEFRAIDSSKCVTEISNPREVDEIVFFLLPNSPVPPGHAAVLYFSVPSPSGIFEHWEVLGAVGFQKPSGVFRTSWPTNEDMKSTAVVQLGVSIETEDVVDNLQLGTGGVQDRKQFALKIANDLFQARRYSSCERFMSSFSQATPAGPEVMVVPTNVLDRWIQRFEHKYNRDPNFMLK 1921
            FG++  GR V T+FR I  +  V +I  P +V ++ FFLLP SPVPPG  AVLYF++P+     ++W++LG V  +KPS +FRTSWPT+ D+    V+QLGVSIE+ D V NL +   G+++RK FALKIA DLF          ++SSFS +       M +PTN+LD+W++RFE KY RDPNFM+K
Sbjct:   11 FGLVIAGRPVITDFREIGPAHYVVDILEPTQVTDLTFFLLPGSPVPPGFGAVLYFALPA----LQNWQLLGTVFAEKPSAIFRTSWPTHPDVVGQPVLQLGVSIESLDNVKNLGIEASGLEERKAFALKIAQDLFN---------YLSSFSSSN--SQSYMTIPTNLLDKWMERFEAKYRRDPNFMMK 183
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQE4_9PHAE3.190e-8974.62DUF775 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S2V1Q5_9STRA2.410e-5553.72Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A024TK25_9STRA4.090e-5252.13DUF775 domain-containing protein n=3 Tax=Aphanomyc... [more]
T0SBJ9_SAPDV1.530e-5151.06DUF775 domain-containing protein n=2 Tax=Saprolegn... [more]
K3X1K5_GLOUD4.040e-5153.19DUF775 domain-containing protein n=1 Tax=Globispor... [more]
A0A5D6XTY2_9STRA6.450e-5151.60DUF775 domain-containing protein n=1 Tax=Pythium b... [more]
A0A1V9ZVR6_9STRA1.090e-4951.06DUF775 domain-containing protein n=1 Tax=Thraustot... [more]
A0A835ZAF1_9STRA1.940e-4947.72DUF775 domain-containing protein n=1 Tax=Tribonema... [more]
A0A8K1CEH9_PYTOL3.000e-4949.47Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0N9M8_PHYIT3.510e-4948.94DUF775 domain-containing protein n=7 Tax=Peronospo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig16contigP-fluviatile_contig16:572421..576835 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score280.4
Seed ortholog evalue6.4e-73
Seed eggNOG ortholog2880.D7FMX4
Preferred nameC11orf73
GOsGO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005829,GO:0005975,GO:0006020,GO:0006066,GO:0006606,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006996,GO:0007030,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010256,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0017038,GO:0019751,GO:0030323,GO:0030324,GO:0030544,GO:0031072,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034605,GO:0034613,GO:0035295,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048513,GO:0048583,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0060541,GO:0061608,GO:0065007,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0080134,GO:0080135,GO:0140104,GO:0140142,GO:1900034,GO:1901615
EggNOG free text desc.Hsp70 protein binding
EggNOG OGsKOG4067@1,KOG4067@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF775
Ec32 orthologEc-25_002670.1
Exons7
Model size2096
Cds size591
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815686.567602-UTR-P-fluviatile_contig16:572420..5737531622815686.567602-UTR-P-fluviatile_contig16:572420..573753Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 572421..573753 +
1693562935.7275639-UTR-P-fluviatile_contig16:572420..5737531693562935.7275639-UTR-P-fluviatile_contig16:572420..573753Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 572421..573753 +
1622815686.6559138-UTR-P-fluviatile_contig16:576663..5768351622815686.6559138-UTR-P-fluviatile_contig16:576663..576835Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 576664..576835 +
1693562936.3277466-UTR-P-fluviatile_contig16:576663..5768351693562936.3277466-UTR-P-fluviatile_contig16:576663..576835Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 576664..576835 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815686.5784752-CDS-P-fluviatile_contig16:573753..5738211622815686.5784752-CDS-P-fluviatile_contig16:573753..573821Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 573754..573821 +
1693562936.1015034-CDS-P-fluviatile_contig16:573753..5738211693562936.1015034-CDS-P-fluviatile_contig16:573753..573821Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 573754..573821 +
1622815686.5900095-CDS-P-fluviatile_contig16:574041..5740901622815686.5900095-CDS-P-fluviatile_contig16:574041..574090Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 574042..574090 +
1693562936.272536-CDS-P-fluviatile_contig16:574041..5740901693562936.272536-CDS-P-fluviatile_contig16:574041..574090Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 574042..574090 +
1622815686.602366-CDS-P-fluviatile_contig16:574611..5747181622815686.602366-CDS-P-fluviatile_contig16:574611..574718Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 574612..574718 +
1693562936.2816067-CDS-P-fluviatile_contig16:574611..5747181693562936.2816067-CDS-P-fluviatile_contig16:574611..574718Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 574612..574718 +
1622815686.613143-CDS-P-fluviatile_contig16:574874..5749951622815686.613143-CDS-P-fluviatile_contig16:574874..574995Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 574875..574995 +
1693562936.2899861-CDS-P-fluviatile_contig16:574874..5749951693562936.2899861-CDS-P-fluviatile_contig16:574874..574995Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 574875..574995 +
1622815686.6227984-CDS-P-fluviatile_contig16:575179..5752931622815686.6227984-CDS-P-fluviatile_contig16:575179..575293Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 575180..575293 +
1693562936.2996972-CDS-P-fluviatile_contig16:575179..5752931693562936.2996972-CDS-P-fluviatile_contig16:575179..575293Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 575180..575293 +
1622815686.6323636-CDS-P-fluviatile_contig16:576088..5761621622815686.6323636-CDS-P-fluviatile_contig16:576088..576162Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 576089..576162 +
1693562936.3087444-CDS-P-fluviatile_contig16:576088..5761621693562936.3087444-CDS-P-fluviatile_contig16:576088..576162Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 576089..576162 +
1622815686.642221-CDS-P-fluviatile_contig16:576605..5766631622815686.642221-CDS-P-fluviatile_contig16:576605..576663Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 576606..576663 +
1693562936.3184679-CDS-P-fluviatile_contig16:576605..5766631693562936.3184679-CDS-P-fluviatile_contig16:576605..576663Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 576606..576663 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig16.2662.1prot_P-fluviatile_contig16.2662.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig16 573754..576663 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig16.2662.1

>prot_P-fluviatile_contig16.2662.1 ID=prot_P-fluviatile_contig16.2662.1|Name=mRNA_P-fluviatile_contig16.2662.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=197bp
MSITAAIPFGVIAPGRAVTTEFRAIDSSKCVTEISNPREVDEIVFFLLPN
SPVPPGHAAVLYFSVPSPSGIFEHWEVLGAVGFQKPSGVFRTSWPTNEDM
KSTAVVQLGVSIETEDVVDNLQLGTGGVQDRKQFALKIANDLFQARRYSS
CERFMSSFSQATPAGPEVMVVPTNVLDRWIQRFEHKYNRDPNFMLK*
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mRNA from alignment at P-fluviatile_contig16:572421..576835+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig16.2662.1 ID=mRNA_P-fluviatile_contig16.2662.1|Name=mRNA_P-fluviatile_contig16.2662.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4415bp|location=Sequence derived from alignment at P-fluviatile_contig16:572421..576835+ (Porterinema fluviatile SAG_2381)
AAGGAGCAGGAGAGACACACACATAGGGAGAGAGCGAGAGATATAGACAT
TTTAAGCGGGTGCCAGACAGCAGGGGGAGCAAAGTGAGCTATCATGCGCC
ACGTGTGTGCTACTATTTCTTTTAGTTGGCGAGTGTGTGCGCCAGAGCGA
AAGTCCAAACGCCCACAATCCACCAGCCACCAGCGGGGAGAGAGTGCTAC
ACACTGCCCACACATCTCACAACCGGGGAAGTTTCCTTCTTACTCAACAG
AGAGCGCGGAGTCTACTCTTCGCGATAAGATTATCACGAGGAGGAACCAT
TTTCGCTCGGAGGAAGCAATCGTCAGAATCACTGCACACACCTCTCGTGT
TTATGTCGCAATTTTCGAGTACGTGTCGCGCATCCTGCCTTGCTCTTCCT
CAACTGTTGCATGTAGGATTCCTTACACAGAAAGCACGGACACAAGTGGA
TGTATGCTGTGTGCGAAAACCATCTCCTTTACCAAGTCTGGGCGCGCGAT
TGATCGCTCTGGCTTCGTCAACCTGAGAGCCTCCTCGTCGGTCGAGAACG
TTCCATTGCTGCAAGTGTAGTCATCGGCCTTCAGACATGCCAACAAAAAC
TTCGCTTGGCAGTGGACGCTTTGACAGCAGAGTTGACACGTCATACAATC
GCGCTGACTTACGTAGGGCAGGACGTGTCATGTCAGCGTTATTACAGGCC
ATGTTTCACCCTTTTGGTCGACTGGTCTTCATTATCCCATTTGGTGCGAA
GGCAGTACTGCCATGTAGTAGCAAAACATTTCGTGTCTATCTACTTCTAG
ACCCGGGTTGGCGCCTACAGGGACAACATGTCTCCAACGGGTTGAGTTTG
CGCTTGCAATCGACCTGGCGCGGGCACATAACATTGGATTTGACAAATTC
TGCACACCATGAGAACAATGGGGAGTCGTGCACGCCTTTGTTTGAGCTTC
GTGCATTTTTGTACTCTGAGCCATTCGGCCGCGCATAGCCTTTGATGGGC
ATTATTTCGCGTGGCTCTGCGTAGAGGAGTCCCAACACCAGTGCAAAAAT
TATTCGTCAATCGGAGTCCTCCCGAGCAGTTTATCTAACACTCTGTCCAA
CGGGCCCTCATACCCCCAGAAGCCCTACCACCGGCGCCAGCTATTGTGGG
GCCAGTCTCTTTTCGGCTCGAAGGCTGCGCCAGCTCTTCAGCAGCCATCC
TGCTCAATTCCGCCTTTGAGTGGACAGCGCACTGACTTCATTTCGATCGC
ATCCCGTCCACCACTCCCTCTGCTTCAAGGCGGAATTGCGTTGCCAACCC
GCCTTCGAGCATCGTGTGCACTTTATCGCCGCGATGTCAATTACAGCGGC
GATCCCGTTCGGCGTCATTGCTCCAGGACGGGCGGTAACAACAGAATTTA
GGTAATTGCGATTGAACATCATTGTTGTGCGAGGTGTCACTCAAGGTGTG
ATTGAAGGGGGGATATATGCCGTGTGGTACATACGAAATTTTAACTTTCG
ATAATCTTGTAAACGCCATGAGCAGAGCTCCTGCTGCTAACCTGAAACTC
GCATGAAGACCGAAAATGAACTGGAAACGAATCCATCGTTCTGCGCGCAC
CCGCTCGTGCCTCGTTCCCAGGGCCATAGATTCCTCGAAATGCGTGACGG
AGATATCGAACCCGCGAGAGGTGAGAGCTTGCGGTATCAACACTTCTAGC
ATATCTTACTTGTTGGGCAATCGCAGTCCAAACTGTTACGCCCCCTGACA
CGTGTCTTCCGAGTCTTCGAAGTAGGACGCATTTTTTACTTCGCCGTGGT
CTCTGTTTCCGAAAGTGCGTTGTGTGGAACAGTAATATAGCGAGAGAAAG
TAACGACATCGAGGGAGAGAGAGAGGGAGAGAGAGTATCTCTGTGAGTAT
GGACACCTTTTAGTTTTTTTGTAAACATTGCGTACACCTCCGGTCCCAAG
AGATTGAAGGCAAGATCCACAACAGATCCCCAATATACCCCAATATCTTC
TCGCTCACTTTTTCCGACGGTCAAGTTGATCGTGAGAGTGCTGTCTCGAG
CAGACAAGAGCATGCGGGAAATATCCTGTCCTACTCTCTTCTATATACTC
AGTTATTTCGCTGTTTTTGCGGGAGCGTCATGTGCTTGGTTCAGCACCTT
ATCTTGTACCGTGAACTGCCTCCTCATGTTTCTTTCGTCAGGTAGACGAG
ATCGTATTTTTTCTCCTGCCAAACTCTCCCGTCCCCCCGGGACACGCTGC
CGTGCTCTACTTCAGTGTTCCCAGCCCTTCTGGAATATTCGAGCATTGGT
AAGTACGTTGTTGATGACTTGATGATGGTTCGCGCGGCCAAGATTGACCG
TCTTTCCTGAGCAGCCGACGTTCCACATACTTTGGTGCTACCAACTGCTG
TGTGGTATGCTGAACTCAATCCTTCATCAATATATCATTCCTGTTCAATT
GTAGGGAGGTGCTCGGAGCGGTCGGCTTCCAAAAACCATCGGGGGTGTTC
CGGACCAGTTGGCCCACGAACGAGGACATGAAGTCAACTGCGGTGGTACA
ACTGGGGGTTAGCATCGAAACCGAGGTTAGCATATCATCGTGGCCAGCCA
TAGCAGATGACCTACCTGCACTAGCTGGTGTGCCAGCGGAAGAGCTTTCG
ATGGTAGAAGATGGTTGCACATTCTTGCGCGGGAAGAAATTGAAAGGGTA
CAGGATCTTAAAGCAAACAATCGTTTGTTGGCTGCTGCCGTCACCGCCTT
TCGCTTCAGGACGTGGTCGACAATCTGCAACTGGGGACCGGAGGCGTGCA
GGACAGGAAGCAGTTTGCACTCAAGATAGCCAACGACCTTTTTCAGGCAC
GACGGTATTCGTCTTGCGAGCGAGTTCTGAATTTGATCAGGACTACAATG
TGCATAGGGTATGAGGGTGATTTGCACGAGCAGGTTCTCCTTGGCGAGGA
TGGTGGCAACTAGTAGTGCCGTTTCACCATTTTACTCTGCCCTTGTGCGA
CGTTCAAAATACTTCCTTTGAATGAGGGATCTGTAGGCTTGTGTCTCTCC
CTCTGTAAACGAGAAACATTTTGGCATTAGTTGTTGTAAATACGGGCTCT
GCAGGCCTGCCTCTCTCCCGTTCTATACGAGAAACTTCTTGGCGTTGTTC
CTCGTTTGGGATTATTATTGGCGCGCGCATGAGCGTCGCCCTTTTTCTGG
GCGGGAGAGGTTATCCTGACAGGCCCCTGCTCTTGAATTCCTTGCCTCAC
TCTACCTACTATGCCCTCCTTCCTCCCTTGAAGATGCCAAAACAAAAAGA
TGAGGTTTGTGCAATTAGGTTGATTTGCACCGAAGAGACACGAAAGCTGA
AATGGAAAAGGTGCTTCAAGGTAGGCCACACTGGCTTAATGTTGTGATCT
TGCTTGATCCCTTAAACGACTGTAGTATTACGTTTCGATTGTTCACAAGA
TCCAAGACCTAAGAAGGTAAAGTATTCCCTGGATTGAATTATTGCGTTTC
GTTGTTCGCCGCCAAGACTGATAAAGAGACTCACGACAAGCAAATTCGGG
ATTTCAAACAGATGATGGCACCACGGCGTCTTAAGCGTAAGATGTTGACC
GGCACGACCTACATCTGACTTTCGCCAGCGGGCACGCTTTTTGTCTTCAT
GTATGCATGCTCGTGCAGTTCATGTCGTCTTTCAGCCAAGCAACCCCGGC
TGGTCCAGAGGTGATGGTGGTGCCAACAAACGTACTCGACAGGTGATGCG
CGGACGCTGTTCAAAAGGAATGATATGCACACATAGCCATTCTGGCGACT
GGGCCCTTAACTATACCGCATCGATCTAGGCCAAGCAGGGAGATAATGAT
CGGGCTCAAGGAAACCCTCAACTGTTTGCCTTAAGCAGCAGGGATTGATG
TCGGACGCAAGCCGCTTCTCTCGCCTGGTTACGCTTTGAGTTTCGTCCGA
ATCCGTTTCTCGCGCGTGCACCCGAAACGTGGATTACCCAGGTAAATATC
TGCACGTATTAAGGTACTCTGTCCCGCTTTCACAGGCTTGTGGGCAGAGA
TGAAGAGACTATTATAACAGCATTTTTCTGCTGTCGCATTTAAGCTGCCG
CCGGCACGAGTCGATATATGAATGGCTCACGACATTTTTGATTCTGTGCC
TGCACTCCTTCGTGCCGCTGACTGTGCCCCGTTAGGTGGATCCAAAGATT
TGAGCACAAGTATAATCGGGACCCAAATTTCATGCTGAAGTAATAAATAT
GTTCGACGATGGAACCACAGGCGTTGATGCCAAGCGATTGGTGGCAGGGA
GAGACAGGGCCAAATGTTTTGCCAAGATCAGGAAACTCTCTGTACGTGTA
CGGGTGCCTGGTATGATCCTTGTTGAACTCGCGAAGCATGTAGGACCATT
GATGGTGCATGCACC
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Coding sequence (CDS) from alignment at P-fluviatile_contig16:572421..576835+

>mRNA_P-fluviatile_contig16.2662.1 ID=mRNA_P-fluviatile_contig16.2662.1|Name=mRNA_P-fluviatile_contig16.2662.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1182bp|location=Sequence derived from alignment at P-fluviatile_contig16:572421..576835+ (Porterinema fluviatile SAG_2381)
ATGTCAATTACAGCGGCGATCCCGTTCGGCGTCATTGCTCCAGGACGGGC
GGTAACAACAGAATTTAGATGTCAATTACAGCGGCGATCCCGTTCGGCGT
CATTGCTCCAGGACGGGCGGTAACAACAGAATTTAGGGCCATAGATTCCT
CGAAATGCGTGACGGAGATATCGAACCCGCGAGAGGGCCATAGATTCCTC
GAAATGCGTGACGGAGATATCGAACCCGCGAGAGGTAGACGAGATCGTAT
TTTTTCTCCTGCCAAACTCTCCCGTCCCCCCGGGACACGCTGCCGTGCTC
TACTTCAGTGTTCCCAGCCCTTCTGGAATATTCGAGCATTGGTAGACGAG
ATCGTATTTTTTCTCCTGCCAAACTCTCCCGTCCCCCCGGGACACGCTGC
CGTGCTCTACTTCAGTGTTCCCAGCCCTTCTGGAATATTCGAGCATTGGG
AGGTGCTCGGAGCGGTCGGCTTCCAAAAACCATCGGGGGTGTTCCGGACC
AGTTGGCCCACGAACGAGGACATGAAGTCAACTGCGGTGGTACAACTGGG
GGTTAGCATCGAAACCGAGGGAGGTGCTCGGAGCGGTCGGCTTCCAAAAA
CCATCGGGGGTGTTCCGGACCAGTTGGCCCACGAACGAGGACATGAAGTC
AACTGCGGTGGTACAACTGGGGGTTAGCATCGAAACCGAGGACGTGGTCG
ACAATCTGCAACTGGGGACCGGAGGCGTGCAGGACAGGAAGCAGTTTGCA
CTCAAGATAGCCAACGACCTTTTTCAGGCACGACGGTATTCGTCTTGCGA
GCGAGACGTGGTCGACAATCTGCAACTGGGGACCGGAGGCGTGCAGGACA
GGAAGCAGTTTGCACTCAAGATAGCCAACGACCTTTTTCAGGCACGACGG
TATTCGTCTTGCGAGCGATTCATGTCGTCTTTCAGCCAAGCAACCCCGGC
TGGTCCAGAGGTGATGGTGGTGCCAACAAACGTACTCGACAGTTCATGTC
GTCTTTCAGCCAAGCAACCCCGGCTGGTCCAGAGGTGATGGTGGTGCCAA
CAAACGTACTCGACAGGTGGATCCAAAGATTTGAGCACAAGTATAATCGG
GACCCAAATTTCATGCTGAAGTAAGTGGATCCAAAGATTTGAGCACAAGT
ATAATCGGGACCCAAATTTCATGCTGAAGTAA
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