mRNA_P-fluviatile_contig16.2650.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig16.2650.1
Unique NamemRNA_P-fluviatile_contig16.2650.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig16.2650.1 vs. uniprot
Match: A0A6H5KI29_9PHAE (RanBD1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI29_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 5.280e-97
Identity = 179/213 (84.04%), Postives = 191/213 (89.67%), Query Frame = 2 
Query:   23 MSDFAELAAKAKEEGVVAAXXXXXSGDAQXXXXXXXXXXXXXXXXXXXXXAPEEESTAQFEPVVQLEEVEVKTHEENEEILWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNCMVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAYDYTEGHLEEVTFALRLGNSDTANEFKEQFTSAQEIVKGLMNAEAPEPAAE 661
            MSDFA+LAAKAKE+G    XXXXX     XXXXXXXXXXXXXXXXXXX       STAQFEPVVQLEEVEVKTHEE+EE+LWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVN  VRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNA+D+TEG LEE+TFALR GNSD+ANEFKEQFT+AQ++V+GLM  EAPEPAAE
Sbjct:    1 MSDFAQLAAKAKEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------STAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNRFVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEMTFALRFGNSDSANEFKEQFTAAQKVVEGLMAGEAPEPAAE 206
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BLAST of mRNA_P-fluviatile_contig16.2650.1 vs. uniprot
Match: A0A7S2XZR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZR9_9STRA)

HSP 1 Score: 218 bits (554), Expect = 3.460e-66
Identity = 104/159 (65.41%), Postives = 126/159 (79.25%), Query Frame = 2 
Query:  185 ESTAQFEPVVQLEEVEVKTHEENEEILWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNCMVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAYDYTEGHLEEVTFALRLGNSDTANEFKEQFTSAQEIVKGLMNAEAPEPAAE 661
            ESTA FEPVVQL+E+EVKTHEE EE+LWK R KLF+FGETLLNKGTGQK W ERGIGE KFL+HK +  +R LMRQE+TMKVICNHV DPRI ++ NAGSDRSWVW+A+D+++G L E  FA+R  NSD A +FK+QF + Q  +  LM+ E    A+E
Sbjct:   68 ESTAHFEPVVQLDEIEVKTHEEEEEVLWKWRGKLFVFGETLLNKGTGQKTWNERGIGEFKFLKHKEHQKIRALMRQERTMKVICNHVVDPRIQMQMNAGSDRSWVWSAFDFSDGELVETVFAIRFANSDIAQDFKKQFDTHQATMASLMSGEDAPGASE 226
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BLAST of mRNA_P-fluviatile_contig16.2650.1 vs. uniprot
Match: A0A835YXP9_9STRA (RanBP1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP9_9STRA)

HSP 1 Score: 213 bits (543), Expect = 4.060e-65
Identity = 108/164 (65.85%), Postives = 130/164 (79.27%), Query Frame = 2 
Query:  179 EEESTAQFEPVVQLEEVEVKTHEENEEILWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNCMVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAYDYTEGHLEEVTFALRLGNSDTANEFKEQFTSAQEIVKGLMNAEAPEPA--AEG 664
            E E T  FEPVVQL+EVEVKTHEE+E++L+KMRAKLF+FGETLLNKG+G K W ERG+GEVKFL+H+ +  +R+LMRQEKTMK+I NHVADPRIVLKPN GSDRSWVW AYD+ +  L E  FA+R G+SD ANEFKE+F   +E+ K +    A E A  AEG
Sbjct:   42 EAECTTVFEPVVQLDEVEVKTHEEDEQVLYKMRAKLFVFGETLLNKGSGTKTWNERGVGEVKFLKHREHEKIRLLMRQEKTMKIIANHVADPRIVLKPNLGSDRSWVWTAYDFVDNELVETVFAIRFGSSDAANEFKEKF---EEVKKDMARIIAGEDAEGAEG 202
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BLAST of mRNA_P-fluviatile_contig16.2650.1 vs. uniprot
Match: A0A8J2T1Z3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1Z3_9STRA)

HSP 1 Score: 213 bits (542), Expect = 2.420e-64
Identity = 100/151 (66.23%), Postives = 126/151 (83.44%), Query Frame = 2 
Query:  182 EESTAQFEPVVQLEEVEVKTHEENEEILWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNCMVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAYDYTEGHLEEVTFALRLGNSDTANEFKEQFTSAQEIVKGLMN 634
            +ESTA+F PVVQL+EVEVKTHEE+E++ +K+RAKLF F ETLLNKG+G+KEW+ERG+GEVK L+H+ N MVRVLMRQEKTMK+ICNHV DPRI L+PN GSDRSWVW+A+D++ G LE+  FA+R GNSD A E+K  F  A+  +K L +
Sbjct:   93 QESTAEFTPVVQLDEVEVKTHEEDEDVDFKIRAKLFRFSETLLNKGSGKKEWIERGVGEVKILKHRENSMVRVLMRQEKTMKIICNHVVDPRIELEPNVGSDRSWVWSAWDFSSGELEDTIFAIRFGNSDGAKEYKAAFEKAKSHMKALKD 243
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BLAST of mRNA_P-fluviatile_contig16.2650.1 vs. uniprot
Match: K0TLK1_THAOC (RanBD1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLK1_THAOC)

HSP 1 Score: 201 bits (511), Expect = 1.620e-60
Identity = 100/156 (64.10%), Postives = 121/156 (77.56%), Query Frame = 2 
Query:  173 APEEESTAQFEPVVQLEEVEVKTHEENEEILWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNCMVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAYDYTEGHLEEVTFALRLGNSDTANEFKEQFTSAQEIVKGLMNAE 640
            APEEESTA FEPVV+L+EVEVK+ EE EE L   R+KLFI+GETLL+KGTG+K W ERGIGE + L+H+ +  +R LMRQEKTMKVI NH  DPRI L+PNAGSDRSWVW+ YD+ EG LEE   ALR  NSD ANEFKE++   Q+ ++ L+  E
Sbjct:   31 APEEESTATFEPVVKLDEVEVKSGEEEEETLCTYRSKLFIYGETLLDKGTGKKTWKERGIGEARILRHREHQRLRFLMRQEKTMKVIANHALDPRIKLEPNAGSDRSWVWSCYDFAEGELEEKVLALRFANSDLANEFKEKYEECQKEMEALLAGE 186
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BLAST of mRNA_P-fluviatile_contig16.2650.1 vs. uniprot
Match: A0A1Z5JPA6_FISSO (Ran-binding protein 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPA6_FISSO)

HSP 1 Score: 200 bits (509), Expect = 3.240e-60
Identity = 97/161 (60.25%), Postives = 127/161 (78.88%), Query Frame = 2 
Query:  173 APEEESTAQFEPVVQLEEVEVKTHEENEEILWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNCMVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAYDYTEGHLEEVTFALRLGNSDTANEFKEQFTSAQEIVKGLMNAEAPEPA 655
            A EEESTA FEPVV+LEEV+VK+ EE EE+L+  R+KLFI+GETLL++GTG K W ERGIGEV+ L+H+ +  +R+LMRQEKTMKVI NHV DP+I L+PN GSDRSWVW+A+D+ EG L+E  FA+R G+SD ANEF+++F   Q  ++ L+  +  E A
Sbjct:   24 AKEEESTATFEPVVKLEEVDVKSGEEEEEVLYTKRSKLFIYGETLLDQGTGNKTWRERGIGEVRLLKHREHQKIRLLMRQEKTMKVIANHVVDPKIKLEPNVGSDRSWVWSAFDFAEGELKETIFAIRFGDSDIANEFRDKFLECQSEMEKLLGGKDAEDA 184
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BLAST of mRNA_P-fluviatile_contig16.2650.1 vs. uniprot
Match: A0A6S8ZTG3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZTG3_9STRA)

HSP 1 Score: 199 bits (507), Expect = 6.070e-60
Identity = 97/162 (59.88%), Postives = 128/162 (79.01%), Query Frame = 2 
Query:  179 EEESTAQFEPVVQLEEVEVKTHEENEEILWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNCMVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAYDYTEGHLEEVTFALRLGNSDTANEFKEQFTSAQEIVKGLMNAEAPEPAAEG 664
            EEESTA F+PVV+LEEVEVK+ EE+EE+++ MRAKLF+FGETLL+KGTG K W ERGIGE + L+H+ +  +R LMRQEKTMKVI NH  DPRI L+PNAGSDRSWVW+A+D+++G LEE  FALR  +S+ AN+FK +F   Q+ ++ ++  E  +P  +G
Sbjct:   26 EEESTATFKPVVELEEVEVKSGEEDEEVVFSMRAKLFLFGETLLDKGTGNKSWRERGIGEARILRHREHQRLRFLMRQEKTMKVIANHAVDPRIKLEPNAGSDRSWVWSAFDFSDGELEETVFALRFADSEIANDFKTKFLECQKEMEAILAGE-DKPGEDG 186
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BLAST of mRNA_P-fluviatile_contig16.2650.1 vs. uniprot
Match: A0A7S3NPI9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPI9_9STRA)

HSP 1 Score: 201 bits (512), Expect = 6.300e-60
Identity = 96/163 (58.90%), Postives = 130/163 (79.75%), Query Frame = 2 
Query:  179 EEESTAQFEPVVQLEEVEVKTHEENEEILWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNCMVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAYDYTEGHLEEVTFALRLGNSDTANEFKEQFTSAQEIVKGLMNAE--APEPAAE 661
            E EST +F PVVQL+EVEVKT EE+EEI++KMRA+L+ F ETLLNKGTG+KEW+ERG+GE K L+H+ +  +R+LMRQEKTMK+I NHV DPRI L+PNAG+D+SWVW A+D++EG L +  FA+R  N++ A +FK+ FT+AQ+++  L+  E   P P A+
Sbjct:   79 EAESTQEFTPVVQLDEVEVKTLEEDEEIIFKMRARLYRFAETLLNKGTGKKEWIERGVGEAKLLKHREHSKIRLLMRQEKTMKIIVNHVIDPRIQLQPNAGNDKSWVWGAWDFSEGELVDEVFAIRFANAENATKFKDAFTNAQQVMAKLIAGEDGPPNPQAD 241
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BLAST of mRNA_P-fluviatile_contig16.2650.1 vs. uniprot
Match: A0A7S1VE37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VE37_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.100e-59
Identity = 96/158 (60.76%), Postives = 124/158 (78.48%), Query Frame = 2 
Query:  194 AQFEPVVQLEEVEVKTHEENEEILWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNCMVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAYDYTEGHLEEVTFALRLGNSDTANEFKEQFTSAQEIVKGLMNAEAPEPAAEGT 667
            A FEPVV+LEEVE KT EE+EE L+ MR+KLFIFGET+L+ GTG+K W ERGIGE++ L+HK +  +R+LMRQEKTMKVICNHV DPRI L+PN GSDRSWVW+A+D+ EG L+E  FA+R  +SD A EFK +F   Q+ +K +++ E  +P  +GT
Sbjct:   25 ATFEPVVKLEEVETKTGEEDEEALFSMRSKLFIFGETMLDVGTGKKTWRERGIGEIRLLKHKQHERIRILMRQEKTMKVICNHVLDPRITLEPNVGSDRSWVWSAFDFAEGDLKETVFAIRFSSSDVAKEFKAKFEECQKEMKKILDGE-DKPDTDGT 181
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BLAST of mRNA_P-fluviatile_contig16.2650.1 vs. uniprot
Match: A0A7S2EXM6_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S2EXM6_TRICV)

HSP 1 Score: 198 bits (503), Expect = 2.210e-59
Identity = 96/154 (62.34%), Postives = 125/154 (81.17%), Query Frame = 2 
Query:  179 EEESTAQFEPVVQLEEVEVKTHEENEEILWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQHKVNCMVRVLMRQEKTMKVICNHVADPRIVLKPNAGSDRSWVWNAYDYTEGHLEEVTFALRLGNSDTANEFKEQFTSAQEIVKGLMNAE 640
            EEESTA FEPVV+L+EVEV++ EE+EE+++ +R+KLFI+GETLL+KGTG+K W ERGIGE K L+H+ +  +R+LMRQEKTMKVI NH  DPRI L+PNAGSDRSWVW+A+D+ EG L E  FALR  +SD AN+FK +FT +Q  ++ L+  E
Sbjct:   22 EEESTATFEPVVKLDEVEVQSGEEDEEVVFGVRSKLFIYGETLLDKGTGKKTWRERGIGEAKILRHREHQRLRILMRQEKTMKVIANHAIDPRIKLEPNAGSDRSWVWSAFDFAEGELVETVFALRFADSDIANDFKTKFTESQSEMEKLLAGE 175
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI29_9PHAE5.280e-9784.04RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S2XZR9_9STRA3.460e-6665.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YXP9_9STRA4.060e-6565.85RanBP1 domain-containing protein n=1 Tax=Tribonema... [more]
A0A8J2T1Z3_9STRA2.420e-6466.23Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
K0TLK1_THAOC1.620e-6064.10RanBD1 domain-containing protein n=1 Tax=Thalassio... [more]
A0A1Z5JPA6_FISSO3.240e-6060.25Ran-binding protein 1 n=1 Tax=Fistulifera solaris ... [more]
A0A6S8ZTG3_9STRA6.070e-6059.88Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3NPI9_9STRA6.300e-6058.90Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S1VE37_9STRA1.100e-5960.76Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S2EXM6_TRICV2.210e-5962.34Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig16contigP-fluviatile_contig16:424674..431208 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score203.4
Seed ortholog evalue1.1e-49
Seed eggNOG ortholog159749.K0TLK1
Preferred nameRANBP1
KEGG koko:K15306,ko:K20282
KEGG Pathwayko05166,ko05203,map05166,map05203
GOsGO:0000060,GO:0000082,GO:0000166,GO:0000226,GO:0000278,GO:0001101,GO:0001882,GO:0001883,GO:0003674,GO:0005092,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006403,GO:0006405,GO:0006508,GO:0006511,GO:0006606,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007088,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007346,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008536,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010564,GO:0010638,GO:0010720,GO:0010975,GO:0010976,GO:0012505,GO:0014070,GO:0015031,GO:0015630,GO:0015833,GO:0015931,GO:0016032,GO:0016043,GO:0017016,GO:0017038,GO:0017076,GO:0019001,GO:0019538,GO:0019899,GO:0019941,GO:0022008,GO:0022402,GO:0023052,GO:0030154,GO:0030163,GO:0030234,GO:0030424,GO:0030695,GO:0031267,GO:0031291,GO:0031344,GO:0031346,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032838,GO:0032886,GO:0033036,GO:0033043,GO:0033267,GO:0033365,GO:0033993,GO:0034504,GO:0034613,GO:0035556,GO:0035639,GO:0036094,GO:0042221,GO:0042886,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045184,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045787,GO:0045840,GO:0045931,GO:0046602,GO:0046604,GO:0046605,GO:0046607,GO:0046677,GO:0046907,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050657,GO:0050658,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051094,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051493,GO:0051495,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051785,GO:0051960,GO:0051962,GO:0060284,GO:0060589,GO:0065007,GO:0065009,GO:0070507,GO:0070542,GO:0070727,GO:0070887,GO:0071229,GO:0071236,GO:0071310,GO:0071396,GO:0071398,GO:0071407,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072750,GO:0090068,GO:0097159,GO:0097367,GO:0097458,GO:0098772,GO:0099568,GO:0120025,GO:0120035,GO:0120038,GO:0120111,GO:1901265,GO:1901344,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1901701,GO:1903047,GO:1904115,GO:2000026
EggNOG free text desc.Ran-binding domain
EggNOG OGs2XC5A@2836,COG5171@1,KOG0864@2759
COG Functional cat.U
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Exons5
Model size952
Cds size648
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815684.0927856-UTR-P-fluviatile_contig16:424673..4246951622815684.0927856-UTR-P-fluviatile_contig16:424673..424695Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 424674..424695 +
1693562911.5179486-UTR-P-fluviatile_contig16:424673..4246951693562911.5179486-UTR-P-fluviatile_contig16:424673..424695Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 424674..424695 +
1622815684.1763246-UTR-P-fluviatile_contig16:430926..4312081622815684.1763246-UTR-P-fluviatile_contig16:430926..431208Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 430927..431208 +
1693562911.7869222-UTR-P-fluviatile_contig16:430926..4312081693562911.7869222-UTR-P-fluviatile_contig16:430926..431208Porterinema fluviatile SAG_2381UTRP-fluviatile_contig16 430927..431208 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815684.1060944-CDS-P-fluviatile_contig16:424695..4249461622815684.1060944-CDS-P-fluviatile_contig16:424695..424946Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 424696..424946 +
1693562911.527492-CDS-P-fluviatile_contig16:424695..4249461693562911.527492-CDS-P-fluviatile_contig16:424695..424946Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 424696..424946 +
1622815684.1192276-CDS-P-fluviatile_contig16:428044..4281431622815684.1192276-CDS-P-fluviatile_contig16:428044..428143Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 428045..428143 +
1693562911.5350254-CDS-P-fluviatile_contig16:428044..4281431693562911.5350254-CDS-P-fluviatile_contig16:428044..428143Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 428045..428143 +
1622815684.1344047-CDS-P-fluviatile_contig16:429148..4292031622815684.1344047-CDS-P-fluviatile_contig16:429148..429203Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 429149..429203 +
1693562911.5425994-CDS-P-fluviatile_contig16:429148..4292031693562911.5425994-CDS-P-fluviatile_contig16:429148..429203Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 429149..429203 +
1622815684.1469362-CDS-P-fluviatile_contig16:430240..4304051622815684.1469362-CDS-P-fluviatile_contig16:430240..430405Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 430241..430405 +
1693562911.5506194-CDS-P-fluviatile_contig16:430240..4304051693562911.5506194-CDS-P-fluviatile_contig16:430240..430405Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 430241..430405 +
1622815684.1597776-CDS-P-fluviatile_contig16:430848..4309261622815684.1597776-CDS-P-fluviatile_contig16:430848..430926Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 430849..430926 +
1693562911.7752688-CDS-P-fluviatile_contig16:430848..4309261693562911.7752688-CDS-P-fluviatile_contig16:430848..430926Porterinema fluviatile SAG_2381CDSP-fluviatile_contig16 430849..430926 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig16.2650.1prot_P-fluviatile_contig16.2650.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig16 424696..430926 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig16.2650.1

>prot_P-fluviatile_contig16.2650.1 ID=prot_P-fluviatile_contig16.2650.1|Name=mRNA_P-fluviatile_contig16.2650.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=216bp
MSDFAELAAKAKEEGVVAAAAAAVSGDAQEASAGAAATADEAAGGESGTA
APEEESTAQFEPVVQLEEVEVKTHEENEEILWKMRAKLFIFGETLLNKGT
GQKEWVERGIGEVKFLQHKVNCMVRVLMRQEKTMKVICNHVADPRIVLKP
NAGSDRSWVWNAYDYTEGHLEEVTFALRLGNSDTANEFKEQFTSAQEIVK
GLMNAEAPEPAAEGT*
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mRNA from alignment at P-fluviatile_contig16:424674..431208+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig16.2650.1 ID=mRNA_P-fluviatile_contig16.2650.1|Name=mRNA_P-fluviatile_contig16.2650.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6535bp|location=Sequence derived from alignment at P-fluviatile_contig16:424674..431208+ (Porterinema fluviatile SAG_2381)
AAGCAAAAAATATCTCAAGATCATGTCTGACTTTGCTGAGCTCGCGGCGA
AAGCCAAGGAGGAAGGAGTGGTTGCCGCCGCCGCTGCGGCCGTGTCTGGC
GATGCACAGGAAGCATCAGCAGGAGCCGCGGCGACCGCTGATGAGGCCGC
CGGGGGCGAATCCGGCACCGCGGCTCCCGAGGAGGAGAGCACGGCACAGT
TCGAACCTGTCGTACAGCTCGAGGAGGTCGAGGTGAAGACACACGAGGAG
AACGAGGAGATTCTGTGGAAGATGTGAGTGGGTGGCACCAAACCGCTCTT
GTGCGCGCCTTTTATCTTGGAGAGAACGCCTCGCGCACCTCTCCCATCTT
GCTGATGTGTGGGCTGCTCAACTAGATCAGATTGGAGATAATGAGCGTGG
GTGCCTTGCGGGGGAGAACGCCGGGCGGAAGCCAAGACGACTTTTCCTCG
TGTCTACGTGACCGGGTGTGTTTTGCTCGCAGAAAATTCGGAGATGGGTG
TCTGCGGGTGTGTGTGTGTGTGCAGTTCAAAAAAATCACAGCCAAAACAA
TGGAGGGGCGGGAGAGCCAAACAGGGCTTCTCAACAGACATGCTCGTTGT
CTCGTGGTGCTTCATGAGAGGGTTGCTTCGCATTTGGGCAGGCAGCGCAC
AGCATAGTTCCCGATACTCATGGTGTTCGGGTTTACATTTGTTTTTCGCC
CTTCTGCGCGCTCTCTCAGAGCAACCGAACCATGGAGGCGGCAGCAGAGG
CATATTTTGGATCATGCCCTCCGGGACCAGAGAGAAAACCATCAAGAAAA
CCATGTAGGGGCCTCCTCCGAAACGTCTCTACATGGCCAAAGAAAGGCGC
AGAGGAAGAGACTTACGGCAAGGCAATTTCATGATTGATTGTCGCACTCA
AGCAAAACGCCACCTTGGAGATATCTGTGTAAAGTTCAATACCCCCCCGC
CTAATGGCTAAAATAGAGGAAAACTCTCTCGTGCCGCCCGCCATTGGCTC
TAGTAGCATCCTCCCATGAGAAAGTGTCGCCGGATCCCTGCACGCGAGCC
AATCGTCAGAGACCACGAATTTTTTTTTCCCCGGGCCATTACACATGTCA
TGTCGGATTCGTTGCGTGATAAAAGGTAGTTTAGCGGAAACCGCGTCGTC
GCTCCACAAACATCACGGACGCGACTGGTGCTCCAGGCATCATCTGACAA
GCATCTGATCGATCAAGCGAGCGACGAGAGAGGGGCCGAAAACCTGGTGT
GTGGCACCGGCTGCACATCCGAGCGTTCGATCCTTTCGCCCGGTGACCGG
CGCGGCTCCCGCTCCACAACAAGGACAACGGCCATACACTTATGAGACCT
TGCTTGGGTATTGATCCCGACGAACGTCCACGGGCTTTGGTCTTTGCGTT
GTCGTTGTCTCGAGCGACATGAAAATTCCAGCCTGCGGAGAAAAGAACAG
GAATGGCCTCTTTCCGTCTCAAAATGTGTCGGGGGTTGTCTTTTTGAGTG
ACCGTTATTTTCCCTTTTTTCTCCACCGAAGCCTCGGGAACAGGTGTGTT
TGTGTTTTCAGGAATCCACTTCTGTAACTACTGCTGTCGCTGTGACGCTG
TGCCGCGGACGCGTTCGCCAGCTGAGGATTCGGCAGCGGCTTCGCCCGCA
CCCGCGCCCGCGCCCGCGCCTGTGTCCTCTCAACGCTCCTCTGCGCTGAG
GGGCGCCGCGGTTTAGACACCACCTATCCTTCTCCGGCACACAATCCCGC
CGGCGATGCGTGGCTTCCCCATGCTTATCTTGCGCATGACAGAATTTAAC
CCTCGACTCGGGCCAACTCTATATGTGGGCAACAATAGGATGAAGGAAAG
ATTTGTCTTCACGGAGGTGTCCTGCAAGGTCGCGGCTATTGCAGCGCGTG
CCCTCGAAACCGGAGGGCGGGGTTTACTCGGCGCTTGCTGGCGACGCGAA
CAGCTTTGGCGTACACGTTCACCTCTGCCACCTCGGAGTGCTTCCGCGTG
CGGCCGCCCAAGGGGCTTCTCGTCGAGCATGTCACGACACTGCTTCATCA
TCACAACTTCCTGCTGTTGGCTTGACAGATGCGTCCTTCTAGTCGCACAA
CGCCGATTATGAGAACGCATCTGTCAGCCAACAGCACGTGATGTCATGAT
GCAGCAGTGTAATGGCATTCCAGACGATGCTCCTTGACATGCCGCTTGCG
GAAGCTCTCCGAGGTGGCGGCGGTGACCTTGGACGCCCAGCCAATGTTCG
TCTCGCCAAGAAGTGCCGTCTGAATCCAGCCTTCCGGGTTTGGTGGCACA
CGCGTCGCAATGGCCTCCACCTAGCAGCACACGTCGGCGAAGGGTAATTC
TTTCTTTCAAGCTCTTGCCCACATCCATGACCTGAGGAGGCTCGGAACCT
CCTCGTCTCGGCCTTCACTTACGTGGTGTGTTCCCTCCGTTCAAGTTGAA
TCCCGCATGCGATCTGTGCGTCTCCGACTCTCGCCCACAAGCACCCATGG
TCGTGGATCGCTTTGTTTTATGGTCGCACTCGAATGCGCATTTTCGTAGT
GGCCCCGCGGTTGCGCAGGTGTGTGTGCTGCGCCGCGCATTCCCGGTCCA
AGGATTGGAGTGTAACTATTTAGCGTCGCGTGAAATACTTAGCGTCGCGT
GGAAGTGTTTGACGAGAGCAGACGGCTCTTTTCTCTCGCCGCAAATTTTA
CGCGTGGCGATCTATCGATATGAAGCTTTGGTGGAGTGTCTTCGATGGCC
ACCACCAAACTTCATTGCACAAGAGAGTGTCAAGAGCGTTTGGGCGGGAT
CGTCAAGGCCGACGCAGGAGATGCCACCTTTAATCCAATACTTGCTATAC
TTACAAAACGCAAGAATTCAAGAGTGCATGCAACTGGACATGTTTGTTGC
ACCGCCCCAGTAGACATTAAGTTCCGCGATCATGAGCGATTATGAGCGAT
CATTCACGAGCTTCTGCTCGCACGCACACGGCGGTGGGGTCACACCCGGC
GAGGAAGGTGGTCAGGCCCATTTTTGGCATGACATGCACGATCCACGTCG
TAACTTTTCTGTCTTGCATCTGCTCCGTATCTCAGGATTAATTGTGGGTG
TGCGGACAATCCCCCCCCCCTTACCGCCCACACTCAAACCATCGTTGCTC
TTTATGTCGGTTATCACACAAGGACCGGTCGGCCGCCGTTTCTTTTCTCG
ATGAACCCTTTAAGCCCCCACCCCCCCAGAAATACATCCATTCATGTATC
CCCTTGCTTGCTCCTGGGGTGAGCACGTTACCGCCGTGCATCATTCGGAC
TAACGGCCACAACCTGACCTTTGCCCGACACAACAACCACCACCATGACC
CCACAACAACAACACCTTCAGGCGGGCCAAGCTGTTCATCTTCGGAGAGA
CGTTGCTCAATAAGGGGACCGGCCAGAAGGAGTGGGTCGAGAGGGGCATC
GGGGAGGTCAAGTTCCTTCAGTGAGTGAGCCAGCGGGCCAGTGTAGATAT
ACAGTAGACCATAAGTCAAAGTCACCTCAGTGTACTCGTTCAGTCTTCAA
TCGTGCCGAGTAGAGTGGAGTCGAAAAGAGTTGGTCGTTCGACTCGCCGT
TGTTGCTCTTCCGCCGTCGTCAAGCTCGTCAAAAATCCATCTCAAGTCTG
CCTCCACAATGCGCCGCTTCGACTCACCAATCTGAGGCAGGAAGGAGGGC
GAGAGGGGCACAGGCCTTACGCGACAGAGAGAAGCAGCGAAGGCGCTTTT
AAGCATGTTTTTGCCACACAAGCTGTTGGCTTACGAGGGAAACGAGACAA
TGAAGCCACGAAGGCGAATCTCGCCGTTGTGACCAATGACGATTTTTTGC
GGGACAGCATTTTTCGCATCTACTCGCACGTGTATCGTTCTGTCCCATTT
AACGATGATGCTGTGCGGAGAGCCTCAACCTTTTTTGTCCCGAGTCAAAC
AAGGGAGGCAGGAGGCAAGAGTAAAAGCTTGGCGGGTTCGATAGCCCTCT
TGACATGGCAGCGACAGTGTCTATTTTATAATGACGTGTGTCGAAGGACC
GCAAGCCCTGCGTCCTAACACAAGTAGTAACGTTTGCACACAGGGGGCAA
CCCTCAGTGTTGTTTCACGTGAAATGTTTAGGTTGACAGAAAGCAAACGG
AACGAGAAAGGAAGGAAAGGGAGCAAGTAGTGGGCCTAGATCAAACAATT
GTGGTGGCGGGACTGCTGTGCCATTCCCCGATACTCTCGCGCATCGTGCG
GGGGCCGCTTGGGATCGACCCGAGGTCCTGTAGTTTTCTCGGCGAGAGGA
AAGTTGGTATTTCATTGATCGTTGGTCTTCGATGTTTGAGCTTTTGGGCT
AGACATCTACCCCGTCTTCTCGTTTATTTTTAGGAGCAGAGAACGCTCCG
TTGAAGTGCCTTCTGCTTCAAGAATGTAACTCCCCCTCTTTTCCAATTTT
GTCGCCGCTGATCCCCTCGCCCCAGGCACAAGGTTAACTGTATGGTTCGC
GTGCTGATGCGGCAAGAGAAGACAATGAAGGTGAGCGGGTAGGGCCTGGG
TCTGAAGTGGGTAGAGGGGCGGGAGCGAGGGGCGGGGGGCTCTTGTTTTC
ATCTACTCTGATTTCTTGAGATGCGGGGGGGGGGGGGTGTACTCATGAAA
ACGCATGCCGTAGTCGGTCAGACCATAGACCTCGCGTCACCTACAATGCC
GGGACGGAGCGATACGCCGGGTTTTCGCCGGCCAGGCGCGTTTCACAAGG
ATAAGCCAGCATCTGGCCATCATCCTTGTGTTTGCTGAGCCAAACCGGGT
CTGCCATGGGTTGATTGGGCATCCGGTAAACCAAACGTTTCACATTCGGA
GATGCGGGGGGCGGGAGAAGGGACCGTATCCCGCGGGACCGCGTAAGTTT
GAGAACACTCAAGAGATCCCCTATTTAGGGTTTGTGCGGAACACCTGGCT
AGCATTTGCCAATCTCCCCGGTTTTCGCCCTTTGCACAAAGAGCGAGAGT
CGCCGTCAGGGTATTTTGTGCAACGAGCCGTAGCTACACGATGGAGGCTT
GGAAATCGGAGGGGCTGATGGATTGCCGTGCGATCGGATCCATGTCGTTG
TTGACTCTGGTGCTTTTTGCCGACAAAACTATTTTTTTGTTACGGGCACT
CGTTGAAGTTATGTAGGAGTAATATTTCTTGGAAAACTACGAAAATGGTT
CTTGATTTGTTTTGCTCTGCGGACTGTTGAATTTAAAAAGCAAAAGAGTC
GTTACATGAAGGCTGCCGAAGCCTTACAGCTTGACAAGACAGGCCAGATG
TTCGCTCACGCATGTACGGGCATCCTGATAGTAGCTAAACGGCGCACAAG
CCCTGCATTCTGTCGGAAAAGTAGCCGCAGCAGCGGCCACCGTGCACCCG
TCCCCGTTCAAATTAGCTGCCCTGTTTGGCTTGTGTCACACCAGTCTCAC
TCTCAATTCCTCAGATGAAAGGAACCGCATTAAACAAAGAGTTGTAGCGC
CTGCAGAAACAAAAGCGTCAAACACGACAACATGCACGGGCCTTCGTCTT
TCGAATTGCTCCGATAGGTAATCTGCAACCACGTGGCGGACCCCCGCATC
GTGCTCAAGCCGAACGCCGGCTCCGATCGATCTTGGGTGTGGAACGCGTA
CGACTACACGGAGGGGCATCTGGAGGAGGTCACTTTCGCACTCCGCCTCG
GGAACTCGGACACTGCCAACGAGTTCAAGGAGGTGAGGGGAGGGGGTAGG
AAGGCAGACACGTAGCAGGCAGGGGAGCAGGCGACGGGCGCTGTGTTTGA
ACAGTTAGTGTCGTTCACCAGGAGTTGGACGTTCGTTTGCTTTTTTTGGG
CGTTGGTAGTCGAGCGGTGCATTTTCTGCCGCAGGAAGCCATATTGCTGG
CGCATAGTTTGGGTCAGGCTCACCTGTCGGCCGGATCTGCGTTCCCGCTT
TGCTCCTCTTTTGTCTGCGGGCCGTGTCATCATTCGTTGTTCACGTTTCG
AATTCCATTCCACAACAATATCGACGTCGAAAGCATGATACCACAGGTGG
GAGACGTGAGTAAGTAGGCTTTGCCCGCCTCCTCGCCCGACTTTTCCGTA
AGTTTCTATGACATTTCGCCGTTTCCCCTCCTTCATCTGTTTGCCGATCG
TCTCCGGTGACTTATCATCGATCAGCAATTCACGTCGGCTCAGGAAATAG
TGAAGGGACTCATGAACGCAGAAGCTCCGGAACCAGCGGCGGAGGGTACG
TAACGTTGCTGGGAATGTGAACTGTCTACTGGCCAAAGCAATTTGCAGCT
GGTTGTATGTTTCTAGCTTGATAAGGCGAATGGGTGCGAGCTGCAAGCAA
GTGCTGCGATTATTGGCGTTGTTTTCGATCGAGGAAAGACATCGGTACTT
TTGTCGACAGGAGGCAGGTTTGAGAGGACACCCTAAACGTTGTGGCAAAC
CCGAAGGCAAACACCTACTAATACTCTGGTTTGAGGTTTTTATTCCGGCT
TGTTTTGCTTGTTCATCTCTTGTCCCACGTCGGAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig16:424674..431208+

>mRNA_P-fluviatile_contig16.2650.1 ID=mRNA_P-fluviatile_contig16.2650.1|Name=mRNA_P-fluviatile_contig16.2650.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1296bp|location=Sequence derived from alignment at P-fluviatile_contig16:424674..431208+ (Porterinema fluviatile SAG_2381)
ATGTCTGACTTTGCTGAGCTCGCGGCGAAAGCCAAGGAGGAAGGAGTGGT
TGCCGCCGCCGCTGCGGCCGTGTCTGGCGATGCACAGGAAGCATCAGCAG
GAGCCGCGGCGACCGCTGATGAGGCCGCCGGGGGCGAATCCGGCACCGCG
GCTCCCGAGGAGGAGAGCACGGCACAGTTCGAACCTGTCGTACAGCTCGA
GGAGGTCGAGGTGAAGACACACGAGGAGAACGAGGAGATTCTGTGGAAGA
TATGTCTGACTTTGCTGAGCTCGCGGCGAAAGCCAAGGAGGAAGGAGTGG
TTGCCGCCGCCGCTGCGGCCGTGTCTGGCGATGCACAGGAAGCATCAGCA
GGAGCCGCGGCGACCGCTGATGAGGCCGCCGGGGGCGAATCCGGCACCGC
GGCTCCCGAGGAGGAGAGCACGGCACAGTTCGAACCTGTCGTACAGCTCG
AGGAGGTCGAGGTGAAGACACACGAGGAGAACGAGGAGATTCTGTGGAAG
ATGCGGGCCAAGCTGTTCATCTTCGGAGAGACGTTGCTCAATAAGGGGAC
CGGCCAGAAGGAGTGGGTCGAGAGGGGCATCGGGGAGGTCAAGTTCCTTC
AGCGGGCCAAGCTGTTCATCTTCGGAGAGACGTTGCTCAATAAGGGGACC
GGCCAGAAGGAGTGGGTCGAGAGGGGCATCGGGGAGGTCAAGTTCCTTCA
GCACAAGGTTAACTGTATGGTTCGCGTGCTGATGCGGCAAGAGAAGACAA
TGAAGGCACAAGGTTAACTGTATGGTTCGCGTGCTGATGCGGCAAGAGAA
GACAATGAAGGTAATCTGCAACCACGTGGCGGACCCCCGCATCGTGCTCA
AGCCGAACGCCGGCTCCGATCGATCTTGGGTGTGGAACGCGTACGACTAC
ACGGAGGGGCATCTGGAGGAGGTCACTTTCGCACTCCGCCTCGGGAACTC
GGACACTGCCAACGAGTTCAAGGAGGTAATCTGCAACCACGTGGCGGACC
CCCGCATCGTGCTCAAGCCGAACGCCGGCTCCGATCGATCTTGGGTGTGG
AACGCGTACGACTACACGGAGGGGCATCTGGAGGAGGTCACTTTCGCACT
CCGCCTCGGGAACTCGGACACTGCCAACGAGTTCAAGGAGCAATTCACGT
CGGCTCAGGAAATAGTGAAGGGACTCATGAACGCAGAAGCTCCGGAACCA
GCGGCGGAGGGTACGTAACAATTCACGTCGGCTCAGGAAATAGTGAAGGG
ACTCATGAACGCAGAAGCTCCGGAACCAGCGGCGGAGGGTACGTAA
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