mRNA_P-fluviatile_contig16.2637.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig16.2637.1 vs. uniprot
Match: A0A6H5KD64_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD64_9PHAE) HSP 1 Score: 407 bits (1046), Expect = 1.540e-122 Identity = 256/550 (46.55%), Postives = 331/550 (60.18%), Query Frame = -2
Query: 182 KAQFRPKRGCVDLVCSRGKIVQSRGVAGLTTYCFFVDIRKA*DKLWHNGL*QKMWEMGITGKSWGMIKKMTECTRSVVM-DGEISEYVDILQEVAQGCHR--TCCKVFINDLNESIAIEEVKQGIDVRGKKVSGLVFADDFVRV*ETLEG-Q*QSR*PWG-AQEMEVHRERPKVRSMIFNE---NPEQFNWEWGESELPGVEQYSYLGVETSKDCSCDAHVQKAIAKGKANVEQMDAILADPHLDTRTKRCIRSNFVVPQLEYAGEA*EG-KKWTKPHERVQMTAAEKILRCSRTASNTVFRAQLGMDSLKSAGVTSKLKWPHW*VE*GNTRHC*QGHMDEGQ-GKEFGERMGRESRETGRRLWEVK*KAGKSWRAQNCSVGHDGREGEAIAWRQD-------KK*GPVIICCKLQAGSGMKMYLNGMMDNAKKLKLRLRVGDVDMPDRRKLISSKRTEEEEERQACPCGAPEECRTHTVAGCELSGRKERT-----MRVR*RELVQHGRVWLTRRR----RNRWCPAEAKQEGDEISKYFLCKVRQNAK 1753
+A FRP R CVD V + KI+Q R AG TTYCFF+D++KA D +W NGL +KMW++GI GK W M+KKMTECTRS VM DGEIS+YVDILQ VAQGC T K++INDL A+E V+QG+ V GK VSGL+FADDFV V ET EG Q Q G ++ + K ++ NE NP +F W+WGE ELP V++Y+YLGVE SK+CS DAH+ K I KGKA + +MD IL DPHLDTR KRC+ N +VP+LEYAGE EG +K K E VQM AA+KIL C+ T SNTV RA+LGM SLK+ KL W + + R +D+ GK + G + R+W+ ++ + G + E +A R+D + + I KL+ G GMK YL+G MD AK+LKL+ RVGD+D+P RRK S +RQ CPCG EE R H V CEL RKER MR R ++ + G++ + + +RW EA ++GD + K FLC + Q K
Sbjct: 203 QAGFRPDRSCVDHVYTLSKIIQGRKDAGRTTYCFFLDVQKAYDTVWRNGLWKKMWDIGIRGKMWRMLKKMTECTRSAVMLDGEISKYVDILQGVAQGCTMSPTLFKIYINDLIS--AVEAVRQGVQVGGKSVSGLMFADDFVGVSETPEGLQEQIDAAVGYTRKWRLSANVGKCAVVVCNEDKKNPVEFKWKWGEEELPVVDRYTYLGVEISKECSWDAHIAKLIGKGKAQIGKMDEILTDPHLDTRIKRCVLLNVIVPKLEYAGEVWEGNEKAVKQLETVQMAAAKKILGCTSTTSNTVLRAELGMYSLKTRRDMQKLNWQYKVSRMSDDRL--PAMVDKAAWGKATPGKKGIRWNKVVERVWKEIGDEEETLDTEGFG-GFKKKVKEMLASREDATLRKKVRSEDHLEIYGKLKEGIGMKSYLDGPMDYAKRLKLQFRVGDLDLPQRRKRYSXXXXXXXXDRQTCPCGKSEESRPHIVGECELY-RKEREDLEEDMRQRGCDMDKFGKLDNSEKTIAVIGDRWWAQEAVEDGDNMCKEFLCSLWQKRK 746
BLAST of mRNA_P-fluviatile_contig16.2637.1 vs. uniprot
Match: D7G873_ECTSI (Chromodomain-helicase-DNA-binding protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G873_ECTSI) HSP 1 Score: 415 bits (1066), Expect = 3.240e-117 Identity = 261/550 (47.45%), Postives = 337/550 (61.27%), Query Frame = -2
Query: 182 KAQFRPKRGCVDLVCSRGKIVQSRGVAGLTTYCFFVDIRKA*DKLWHNGL*QKMWEMGITGKSWGMIKKMTECTRSVVM-DGEISEYVDILQEVAQGCHR--TCCKVFINDLNESIAIEEVKQGIDVRGKKVSGLVFADDFVRV*ETLEG-Q*QSR*PWG-AQEMEVHRERPKVRSMIFNE---NPEQFNWEWGESELPGVEQYSYLGVETSKDCSCDAHVQKAIAKGKANVEQMDAILADPHLDTRTKRCIRSNFVVPQLEYAGEA*EG-KKWTKPHERVQMTAAEKILRCSRTASNTVFRAQLGMDSLKSAGVTSKLKWPHW*VE*GNTRHC*QGHMDEGQ-GKEFGERMGRESRETGRRLWEVK*KAGKSWRAQNCSVGHDGREGEAIAWRQD-------KK*GPVIICCKLQAGSGMKMYLNGMMDNAKKLKLRLRVGDVDMPDRRKLISSKRTEEEEERQACPCGAPEECRTHTVAGCELSGRKERT-----MRVR*RELVQHGRVWLTRRR----RNRWCPAEAKQEGDEISKYFLCKVRQNAK 1753
+A FRP R CVD V + KI+Q R AG TTYCFF+DI+KA D +W NGL +KMW++GI GK W M+KKMTECTRS VM DGEIS+YVDILQ VAQGC T K++INDL A+E V+QG+ V GK VSGL+FADDFV V ET EG Q Q G ++ + K ++ NE NP +F W+WGE ELP V++Y+YLGVE SK+CS DAH+ K I KGKA + +MD IL DPHLDTR KRCI +VP+LEYAGE EG +K K E VQM AA+KIL CS T SNTV RA+LGM SLK+ KLKW + + R +DE GK + G + ++W+ ++ + G + E + R++ + + I KL+ G GMK YL+G MD AKKLKL+ RVGD+D+P+RRK +S+R EEEE+R CPCG EE R H V CEL RKER MR R ++ + G++ + + +RW EA ++GD++ K FL + Q K
Sbjct: 1007 QAGFRPDRSCVDHVYTLSKIIQGRKDAGRTTYCFFLDIQKAYDTVWRNGLWKKMWDIGIRGKMWRMLKKMTECTRSAVMLDGEISKYVDILQGVAQGCTMSPTLFKIYINDLIR--AVEAVRQGVQVEGKSVSGLMFADDFVGVSETPEGLQEQIDAAVGYTRKWRLSANVGKCAVVVCNEDKKNPVEFKWKWGEEELPVVDKYTYLGVEISKECSWDAHIAKLIGKGKAQIGKMDEILTDPHLDTRIKRCILLKVIVPKLEYAGEIWEGNEKAVKQLETVQMAAAKKILGCSSTTSNTVLRAELGMYSLKTKRDMQKLKWQYKVSRMSDDRL--PAMVDEAAWGKATPGKKGIRWDKVVEKVWKEIGDEEETLDTEGFG-GFKTKVKEMLESREETTLRKKVRSEDHLEIYGKLKEGIGMKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELY-RKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRK 1550
BLAST of mRNA_P-fluviatile_contig16.2637.1 vs. uniprot
Match: A0A6H5JGJ6_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ6_9PHAE) HSP 1 Score: 328 bits (840), Expect = 5.650e-96 Identity = 216/485 (44.54%), Postives = 267/485 (55.05%), Query Frame = -2
Query: 332 KAQFRPKRGCVDLVCSRGKIVQSRGVAGLTTYCFFVDIRKA*DKLWHNGL*QKMWEMGITGKSWGMIKKMTECTRSVVMDGEISEYVDILQEVAQGCHR--TCCKVFINDLNESIAIEEVKQGIDVRGKKVSGLVFADDFVRV*ETLEGQ*QSR*PWGAQEMEVHRERPKVRSMIFNENPEQFNWEWGESELPGVEQYSYLGVETSKDCSCDAHVQKAIAKGKANVEQMDAILADPHLDTRTKRCIRSNFVVPQLEYAGEA*EG-KKWTKPHERVQMTAAEKILRCSRTASNTVFRAQLGMDSLKSAGVTSKLKWPHW*VE*GNTRHC*QGHMDEGQ-GKEFGERMGRESRETGRRLW-------EVK*KAGKSWRAQNCSVGHDGREGEAIAWRQDKK*GPVIICCKLQAGSGMKMYLNGMMDNAKKLKLRLRVGDVDMPDRRKLISSKRTEEEEERQACPCGAPEECRTHTVAGCELSGRKER 1753
+A FRP R CVD V + KI+Q R AG TTYCFF+D++KA D +W NGL +KMW++GI G W M+K MTECTRS GC T K++INDL A+E V+QG+ V GK VSGL+FADDFV V ET EG Q + R V E ELP V++Y+YLGVE SK+CS DAH+ K I KGKA + +MD IL DPHLDTR KRC+ N +VP+LEYAGE EG +K K E VQM AA+KIL CS T SNTV RA+LGM SLK KL W + + R +D+ GK + G + R+W E G + + RE EA ++ + + KL+ G GMK YL+G MDNAKKLKL+ RVGD+D+P+RRK SS +RQ CPCG EE H V CEL RKER
Sbjct: 77 QAGFRPDRSCVDHVYTLSKIIQGRKDAGRTTYCFFLDVQKAYDTVWRNGLWKKMWDIGIRGNMWRMLKNMTECTRSA------------------GCTMSPTLFKIYINDLIR--AVEAVRQGVQVGGKSVSGLMFADDFVGVSETPEGL-QEQIDAAVGYTRKWRLSANVGKCAVVE------------ELPVVDRYTYLGVEISKECSWDAHIAKLIGKGKAQIGKMDEILTDPHLDTRIKRCVLLNVIVPKLEYAGEVWEGNEKAVKQLETVQMAAAKKILGCSSTTSNTVLRAELGMYSLKKKRDMQKLNWQYKVSRMSDDRL--PAMVDKAAWGKATPGKKGIRWDKVVERVWKEIGDEEETLDTEGFGGFKKKVKEMLESRE-EATLRKKVRSNDHLETYEKLKEGIGMKSYLDGPMDNAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQTCPCGNSEESTPHIVGECELY-RKER 524
BLAST of mRNA_P-fluviatile_contig16.2637.1 vs. uniprot
Match: A0A6H5JKY8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY8_9PHAE) HSP 1 Score: 307 bits (786), Expect = 3.050e-90 Identity = 173/318 (54.40%), Postives = 208/318 (65.41%), Query Frame = -2
Query: 812 KAQFRPKRGCVDLVCSRGKIVQSRGVAGLTTYCFFVDIRKA*DKLWHNGL*QKMWEMGITGKSWGMIKKMTECTRSVVM-DGEISEYVDILQEVAQGCHR--TCCKVFINDLNESIAIEEVKQGIDVRGKKVSGLVFADDFVRV*ETLEGQ*QSR*PWGAQEMEVHRERPKVRSMIFNENPEQFNWEWGESELPGVEQYSYLGVETSKDCSCDAHVQKAIAKGKANVEQMDAILADPHLDTRTKRCIRSNFVVPQLEYAGEA*EG-KKWTKPHERVQMTAAEKILRCSRTASNTVFRAQLGMDSLKSAGVTSKLKWPH 1753
+A FRP R CVD V + KI+Q R AG TTYCFF+D++KA D +W NGL +KMW++GI GK W M+KKMTECTRS VM DGEIS+YVDILQ VAQGC T K++INDL A+E V+QG+ V GK VSGL+FADDFV V ET P G QE E+ R + N ++ V Y+YLGVE SK+CS DAH+ K I KGKA + +MD IL DPHLDTR KRC+ N +VP+LEYAGE EG +K K E VQM AA+KIL CS T SNTV RA+LGM SLK+ KL W +
Sbjct: 15 QAGFRPDRSCVDHVYTLSKIIQGRKDAGRTTYCFFLDVQKAYDTVWRNGLWKKMWDIGIRGKMWRMLKKMTECTRSAVMLDGEISKYVDILQGVAQGCTMSPTLFKIYINDLIR--AVEAVRQGVQVGGKSVSGLMFADDFVGVSET---------PEGLQE-EIDAVVGYTRKWRLSANVGKY----------AVVVYTYLGVEISKECSWDAHIAKLIGKGKAQIGKMDEILTDPHLDTRIKRCVLLNVIVPKLEYAGEVWEGNEKAVKQLETVQMAAAKKILGCSSTTSNTVLRAELGMYSLKTKRDMQKLNWQY 310
BLAST of mRNA_P-fluviatile_contig16.2637.1 vs. uniprot
Match: A0A6H5K3U9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3U9_9PHAE) HSP 1 Score: 308 bits (788), Expect = 1.720e-88 Identity = 181/370 (48.92%), Postives = 221/370 (59.73%), Query Frame = -2
Query: 812 KAQFRPKRGCVDLVCSRGKIVQSRGVAGLTTYCFFVDIRKA*DKLWHNGL*QKMWEMGITGKSWGMIKKMTECTRSVVM-DGEISEYVDILQEVAQGCHR--TCCKVFINDLNESIAIEEVKQGIDVRGKKVSGLVFADDFVRV*ETLEG-Q*QSR*PWG-AQEMEVHRERPKVRSMIFNE---NPEQFNWEWGESEL-----------------------------------------------PGVEQYSYLGVETSKDCSCDAHVQKAIAKGKANVEQMDAILADPHLDTRTKRCIRSNFVVPQLEYAGEA*EG-KKWTKPHERVQMTAAEKILRCSRTASNTVFRAQLGMDSLKSAGVTSKLKWPH 1753
+A FRP R CVD V + KI+Q R AG TTYCFF+D++ A D +W NGL +KMW++GI GK W M+KKMTECTRS VM DGEIS+YVDILQ VAQGC T KV+INDL A+E V+QG+ V GK VSGL+FADD V V ET EG Q Q G ++ + K ++ N+ NP +F W+W E EL P V++Y+YLGVE SK+CS DAH+ K I KGKA + +MD IL DPHLDTR KRC+ N +VP+LEYAGE EG +K K E VQM AA+KIL CS T SNTV RA+LGM SLK+ KL W +
Sbjct: 77 QAGFRPDRSCVDHVYTLSKIIQGRKDAGRTTYCFFLDVQYACDTVWRNGLWEKMWDIGIRGKMWRMLKKMTECTRSAVMLDGEISKYVDILQGVAQGCTMSPTLLKVYINDLIR--AVEAVRQGVQVGGKSVSGLMFADDLVGVSETPEGLQEQIDAAVGYTRKWRLSANVGKCAVVVCNDDKKNPVEFKWKWEEEELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPVVDRYTYLGVEISKECSWDAHIAKLIGKGKAQIGKMDEILTDPHLDTRIKRCVLLNVIVPKLEYAGEVWEGNEKAVKQLETVQMAAAKKILGCSSTTSNTVLRAELGMYSLKTKRDMQKLNWQY 444
BLAST of mRNA_P-fluviatile_contig16.2637.1 vs. uniprot
Match: A0A6H5KI62_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI62_9PHAE) HSP 1 Score: 296 bits (758), Expect = 1.250e-84 Identity = 206/521 (39.54%), Postives = 287/521 (55.09%), Query Frame = -2
Query: 320 DGVRCYRKKTYFV---KAQFRPKRGCVDLVCSRGKIVQSRGVAGLTTYCFFVDIRKA*DKLWHNGL*QKMWEMGITGKSWGMIKKMTECTRSVVM-DGEISEYVDILQEVAQGC--HRTCCKVFINDLNESIAIEEVKQGIDVRGKK--VSGLVFADDFVRV*ETLEGQ*QSR*PWGAQEMEVHRERPKVRS---MIFNEN---PEQFNWEWGESELPGVEQYSYLGVETSKDCSCDAHVQKAIAKGKANVEQMDAILADPHLDTRTKRCIRSNFVVPQLEYAGEA*EG-KKWTKPHERVQMTAAEKILRCSRTASNTVFRAQLGMDSLKSAGVTSKLKWPHW*VE*GNTRHC*QGHMD----EGQGKEFGERMGRESRETGR---RLW--------EVK*KAGKSWRAQNCSVGHDGREGEAIAWRQDKK*GPVIICCKLQAGSGMKMYLNGMMDNAKKLKLRLRVGDVDMPDRRKLISSKRTEEEEERQACPCGAPEECRTHTVAGCELSGRKERTMRV 1792
DG+ +K + + +A FR KRGCVD V + G+I+Q R AG TYCFF+D++KA D +W NGL +++ + GI GK W ++KKMTECT+S VM DGE+S++ DI Q V QGC T +VFINDL E +E V++G+ V + VSG++FADDFV + +T EG Q + + + R V+ M+ NEN P + W+WG E+ V+QY+YLGVE +KDCS +AH+ K KGKA ++ ILA+ HLDTR K + + +VP LEYAGE EG KK K E QM AA+ IL CSR SN RA+LG+ SL+S KL W + R C G + K ++ GR+ E + +W E G + SV RE + + K G + + L+ G G K YL+G MD KLK++ R GD+ + +RR+ + +EE++ C CG E R H VA C L +KER + V
Sbjct: 8 DGIVGVLEKEHSISEGQAGFRKKRGCVDHVFTVGRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLLE--VVEAVRKGVKVGDTETSVSGMLFADDFVGMSDTPEGL-QLQIDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKARAGKLHPILANRHLDTRIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQY--------RMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEG-LEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRT--VDEEDDEFKCDCGFECEDRVHVVAECPLY-KKEREVYV 513
BLAST of mRNA_P-fluviatile_contig16.2637.1 vs. uniprot
Match: A0A6H5JTB2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB2_9PHAE) HSP 1 Score: 293 bits (751), Expect = 3.250e-83 Identity = 202/505 (40.00%), Postives = 279/505 (55.25%), Query Frame = -2
Query: 320 KAQFRPKRGCVDLVCSRGKIVQSRGVAGLTTYCFFVDIRKA*DKLWHNGL*QKMWEMGITGKSWGMIKKMTECTRSVVM-DGEISEYVDILQEVAQGC--HRTCCKVFINDLNESIAIEEVKQGIDVRGKK--VSGLVFADDFVRV*ETLEGQ*QSR*PWGAQEMEVHRERPKVRS---MIFNEN---PEQFNWEWGESELPGVEQYSYLGVETSKDCSCDAHVQKAIAKGKANVEQMDAILADPHLDTRTKRCIRSNFVVPQLEYAGEA*EG-KKWTKPHERVQMTAAEKILRCSRTASNTVFRAQLGMDSLKSAGVTSKLKWPHW*VE*GNTRHC*QGHMD----EGQGKEFGERMGRESRETGR---RLW--------EVK*KAGKSWRAQNCSVGHDGREGEAIAWRQDKK*GPVIICCKLQAGSGMKMYLNGMMDNAKKLKLRLRVGDVDMPDRRKLISSKRTEEEEERQACPCGAPEECRTHTVAGCELSGRKERTMRV 1753
+A FR KRGCVD V + G+I+Q R AG TYCFF+D++KA D +W NGL +++ + GI GK W ++KKMTECT+S VM DGE+S++ DI Q V QGC T +VFINDL E +E V++G+ V + VSG++FADDFV + +T EG Q + + + R V+ M+ NEN P + W+WG E+ V+QY+YLGVE +KDCS +AH+ K KGKA ++ ILA+ HLDTR K + + +VP LEYAGE EG KK K E QM AA+ IL CSR SN RA+LG+ SL+S KL W + R C G + K ++ GR+ E + +W E G + SV RE + + K G + + L+ G G K YL+G MD KLK++ R GD+ + +RR+ + +EE++ C CG E R H VA C +KER + V
Sbjct: 46 QAGFRKKRGCVDHVFTVGRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLLE--VVEAVRKGVKVGDTETSVSGMLFADDFVGMSDTPEGL-QLQIDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKARAGKLHPILANRHLDTRIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQY--------RMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEG-LEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRT--VDEEDDEFKCDCGFECEDRVHVVAECPWY-KKEREVYV 535
BLAST of mRNA_P-fluviatile_contig16.2637.1 vs. uniprot
Match: A0A6H5KUW5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW5_9PHAE) HSP 1 Score: 295 bits (754), Expect = 1.010e-82 Identity = 202/505 (40.00%), Postives = 280/505 (55.45%), Query Frame = -2
Query: 320 KAQFRPKRGCVDLVCSRGKIVQSRGVAGLTTYCFFVDIRKA*DKLWHNGL*QKMWEMGITGKSWGMIKKMTECTRSVVM-DGEISEYVDILQEVAQGC--HRTCCKVFINDLNESIAIEEVKQGIDVRGKK--VSGLVFADDFVRV*ETLEGQ*QSR*PWGAQEMEVHRERPKVRS---MIFNEN---PEQFNWEWGESELPGVEQYSYLGVETSKDCSCDAHVQKAIAKGKANVEQMDAILADPHLDTRTKRCIRSNFVVPQLEYAGEA*EG-KKWTKPHERVQMTAAEKILRCSRTASNTVFRAQLGMDSLKSAGVTSKLKWPHW*VE*GNTRHC*QGHMD----EGQGKEFGERMGRESRETGR---RLW--------EVK*KAGKSWRAQNCSVGHDGREGEAIAWRQDKK*GPVIICCKLQAGSGMKMYLNGMMDNAKKLKLRLRVGDVDMPDRRKLISSKRTEEEEERQACPCGAPEECRTHTVAGCELSGRKERTMRV 1753
+A FR KRGCVD V + G+I+Q R AG TYCFF+D++KA D +W NGL +++ + GI GK W ++KKMTECT+S VM DGE+S++ DI Q V QGC T +VFINDL E +E V++G+ V + VSG++FADDFV + +T EG Q + + + R V+ M+ NEN P + W+WG E+ V+QY+YLGVE +KDCS +AH+ K KGK+ ++ ILA+ HLDTR K + + +VP LEYAGE EG KK K E QM AA+ IL CSR SN RA+LG+ SL+S KL W + R C G + K ++ GR+ E + +W E G + SV RE + + K G + + L+ G G K YL+G MD KLK++ R GD+ + +RR+ + +EE++ C CG E R H VA C L +KER + V
Sbjct: 84 QAGFRKKRGCVDHVFTVGRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLLE--VVEAVRKGVKVGDTETSVSGMLFADDFVGMSDTPEGL-QLQIDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKSRAGKLHPILANRHLDTRIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQY--------RMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEG-LEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRT--VDEEDDEFKCDCGFECEDRVHVVAECPLY-KKEREVYV 573
BLAST of mRNA_P-fluviatile_contig16.2637.1 vs. uniprot
Match: A0A6H5JUL8_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL8_9PHAE) HSP 1 Score: 293 bits (750), Expect = 8.500e-82 Identity = 202/505 (40.00%), Postives = 279/505 (55.25%), Query Frame = -2
Query: 320 KAQFRPKRGCVDLVCSRGKIVQSRGVAGLTTYCFFVDIRKA*DKLWHNGL*QKMWEMGITGKSWGMIKKMTECTRSVVM-DGEISEYVDILQEVAQGC--HRTCCKVFINDLNESIAIEEVKQGIDVRGKK--VSGLVFADDFVRV*ETLEGQ*QSR*PWGAQEMEVHRERPKVRS---MIFNEN---PEQFNWEWGESELPGVEQYSYLGVETSKDCSCDAHVQKAIAKGKANVEQMDAILADPHLDTRTKRCIRSNFVVPQLEYAGEA*EG-KKWTKPHERVQMTAAEKILRCSRTASNTVFRAQLGMDSLKSAGVTSKLKWPHW*VE*GNTRHC*QGHMD----EGQGKEFGERMGRESRETGR---RLW--------EVK*KAGKSWRAQNCSVGHDGREGEAIAWRQDKK*GPVIICCKLQAGSGMKMYLNGMMDNAKKLKLRLRVGDVDMPDRRKLISSKRTEEEEERQACPCGAPEECRTHTVAGCELSGRKERTMRV 1753
+A FR KRGCVD V + G+I+Q R AG TYCFF+D++KA D +W NGL +++ + GI GK W ++KKMTECT+S VM DGE+S++ DI Q V QGC T +VFINDL E +E V++G+ V + VSG++FADDFV + +T EG Q + + + R V+ M+ NEN P + W+WG E+ V+QY+YLGVE +KDCS +AH+ K KGKA ++ ILA+ HLDTR K + + +VP LEYAGE EG KK K E QM AA+ IL CS SN RA+LG+ SL+S KL W + R C G + K ++ GR+ E + +W E G + SV RE + + K G + + L+ G G K YL+G MD KLK++ R GD+ + +RR+ + +EE++ C CG E R H VA C L +KER + V
Sbjct: 169 QAGFRKKRGCVDHVFTVGRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLLE--VVEAVRKGVKVGDTETSVSGMLFADDFVGMSDTPEGL-QLQIDAAKKFTDKWRLSANVKKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKARAGKLHPILANRHLDTRIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQMKAAKIILGCSTRTSNAAVRAELGIQSLRSGRDARKLTWQY--------RMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEG-LEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRT--VDEEDDEFKCDCGFECEDRVHVVAECPLY-KKEREVYV 658
BLAST of mRNA_P-fluviatile_contig16.2637.1 vs. uniprot
Match: A0A6H5K1P7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1P7_9PHAE) HSP 1 Score: 293 bits (749), Expect = 2.560e-81 Identity = 202/505 (40.00%), Postives = 279/505 (55.25%), Query Frame = -2
Query: 320 KAQFRPKRGCVDLVCSRGKIVQSRGVAGLTTYCFFVDIRKA*DKLWHNGL*QKMWEMGITGKSWGMIKKMTECTRSVVM-DGEISEYVDILQEVAQGC--HRTCCKVFINDLNESIAIEEVKQGIDVRGKK--VSGLVFADDFVRV*ETLEGQ*QSR*PWGAQEMEVHRERPKVRS---MIFNEN---PEQFNWEWGESELPGVEQYSYLGVETSKDCSCDAHVQKAIAKGKANVEQMDAILADPHLDTRTKRCIRSNFVVPQLEYAGEA*EG-KKWTKPHERVQMTAAEKILRCSRTASNTVFRAQLGMDSLKSAGVTSKLKWPHW*VE*GNTRHC*QGHMD----EGQGKEFGERMGRESRETGR---RLW--------EVK*KAGKSWRAQNCSVGHDGREGEAIAWRQDKK*GPVIICCKLQAGSGMKMYLNGMMDNAKKLKLRLRVGDVDMPDRRKLISSKRTEEEEERQACPCGAPEECRTHTVAGCELSGRKERTMRV 1753
+A FR KRGCVD V + G+I+Q R AG TYCFF+D++KA D +W NGL +++ + GI GK W ++KKMTECT+S VM DGE+S++ DI Q V QGC T +VFINDL E +E V++G+ V + VSG++FADDFV + +T EG Q + + + R V+ M+ NEN P + W+WG E+ V+QY+YLGVE +KDCS +AH+ K KGKA ++ ILA+ HLDT K + + +VP LEYAGE EG KK K E QM AA+ IL CSR SN RA+LG+ SL+S KL W + R C G + K ++ GR+ E + +W E G + SV RE + + K G + + L+ G G K YL+G MD KLK++ R GD+ + +RR+ + +EE++ C CG E R H VA C L +KER + V
Sbjct: 200 QAGFRKKRGCVDHVFTVGRIIQGRKRAGKPTYCFFLDVKKAYDTVWRNGLWKQLSKYGIKGKMWRVLKKMTECTKSAVMLDGELSKFFDIEQGVPQGCTLSPTLFQVFINDLLE--VVEAVRKGVKVGDTETSVSGMLFADDFVGMSDTPEGL-QLQIDAAKKFTDKWRLSANVQKSAVMVCNENKEEPVEHRWKWGIEEIAVVDQYTYLGVEIAKDCSWNAHMSKVAEKGKARAGKLHPILANRHLDTCIKLTVLKSVIVPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQY--------RMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEG-LEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRT--VDEEDDEFKCDCGFECEDRVHVVAECPLY-KKEREVYV 689 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig16.2637.1 >prot_P-fluviatile_contig16.2637.1 ID=prot_P-fluviatile_contig16.2637.1|Name=mRNA_P-fluviatile_contig16.2637.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=168bp MCPCQQCLVLPHSTYQCGHFNLLVTPADFNESMPSCARNTVLLAVLEHLNback to top mRNA from alignment at P-fluviatile_contig16:232830..236563+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig16.2637.1 ID=mRNA_P-fluviatile_contig16.2637.1|Name=mRNA_P-fluviatile_contig16.2637.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3734bp|location=Sequence derived from alignment at P-fluviatile_contig16:232830..236563+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig16:232830..236563+ >mRNA_P-fluviatile_contig16.2637.1 ID=mRNA_P-fluviatile_contig16.2637.1|Name=mRNA_P-fluviatile_contig16.2637.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1008bp|location=Sequence derived from alignment at P-fluviatile_contig16:232830..236563+ (Porterinema fluviatile SAG_2381)back to top |