mRNA_P-fluviatile_contig15.2571.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig15.2571.1 vs. uniprot
Match: D7FI05_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI05_ECTSI) HSP 1 Score: 1268 bits (3280), Expect = 0.000e+0 Identity = 755/1146 (65.88%), Postives = 837/1146 (73.04%), Query Frame = 2
Query: 845 VATAGQALVMTGTGFGEVVADVRVMVGGRDCRDPELCHLVCRPCGDEDRCEFDEMCMEDGLAKEKVCVPICDGTKGSCPCDHRCLPKRFELQGEPRSMVVNLCRPPDADPNFLCHGSVLREQERIQCTVPVLVWDQAETESSDRAGXXXXXXXXXXXXXXAPSSVAAGAE---GEGLLNGWDGGEVPPXXXXXXXXXXXXXXXXTAVGVSLSVGGLGAVWEGSVEYAPRPCGSADDCDDGDACSIDACVKGKCVHTGVQEGYGCQAQPSSTTWRGDAYRYFQIVDRADPAEEADFLAEVRAQDKVSSVTFADDYPVEFHNWVEFPVYGTKYQDIYISPNGALFVPPLQTVVPGGLSAVSPSTEAFFPVLKADWNPSDSRASSSVLLMIGDEQFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRYVRVGDKADWTVGVSGNSFVSPTIRDRHVRQAELIQIDEDGLPVASAAASAVFPGASAPFPRPSGSFNGSDASDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIEVTLCRAPTVACLGRACGKAGTEIPILWEGFGCRAAAASLNVTFGCRIGGLEVPAVSLEDFSGRSSWAEGGTGHWTGDSPRDRRKVWGPDWAGVDREDRRESAGGGLVCEVPRLEWAEEGQERAVMVPVEVVWFSTEQASASAQQQMRLGASEVAVRGMSVVGDAGAVNSHVLTFRYFRDDVDAPECGCSSTPRQRDVTCDSCLVCGGDDSSKDCGGFCHGEAYVSPCGDCAGGMTGVTGGLWCDDYRDYLDGPAQAALLSLSQSIMMLVALFIMTAFLTTCLFLARALMLRGVLAVERDRHGTLRRRVFPRHRGLSPSELDCLETAEYPAFGVAAADADIGEDEGSGYTDAXXXXXXXXXXXMKLREDSHAVCGSGAGAMAAVRAXXXXGGAAGGEPKEDGGXXXXXXXXXXXXXXXXXXXEEPCADCAICLTGFDSGDMLRKLPCRHFFHQECVDEWLHLSVSCPLCKRSAREGLRRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWWRGLSSYLSRSFTDGGXXXXXXV------GRRQWEQVGD 4255
V AG+AL++ G+GFGE V+DVRVMVGGRDCRDPELCHLVCRPCG+EDRCEFDEMCMEDGL+KEKVC+PICDGT+GSCPCDHRCLPKRFELQGEP SMVVNLCRPPDADPNFLCHGSVLREQERIQCTVPVLVWDQAETESSDRAG G E G G++ G GE XXXXXXXXX +A SLSVG GAVWEGSVEYAPR C SA+DCDDGDACS DACV+G CVHTGVQEGYGCQAQP TWRGD YRYFQIVDRADP E+A+F+AEVRAQ+K+SSVTFADDYPVEFHNW EFPVYGTKY+D+YISPNGALFVPPLQTVVPGGLSAVSPSTEA+FPVLKADWNPSDSRA+SSVL+MI ++QFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRY+R+GDKADWT GVSGNSFVSPTIR+RHVRQ++ IQ+DE+GLP A+A PS +F+ + XXXXXXXXXXXXXXXXXXXX EVTLCRAPT+ACL RACGKAG+E+P+LWEG GCRA AASLNVTF CRIGGLEVPAVSLE + SS +G G + WGPDW G + GGGLVCEVPRLEWAE GQ+ AVMVPVEV+W EQAS SA++Q+RLGA+ V V G+SV+GDAG +NSHVL FRY+RDD +AP+CGCS++PRQ ++TCDSCLVCGGD S+KDCGGFCHGEA VSPCG+C+GGMTGVTGGLWCD+Y +YLDGPA+AALLSLSQSIMMLVAL IMTAFLT CLFLARALMLRGVLA+E DRHGTLRRR F RHRGLSPSELDCLET EY + + D G D+ S D K+ S V + GG ADCAICL GF+ GD+LRKLPC HFFHQ+CVDEWLHLSVSCPLCKRSAREGLRR+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +W+RGL S L+R F G XXXX GRRQW++V D
Sbjct: 259 VVKAGEALMVVGSGFGEAVSDVRVMVGGRDCRDPELCHLVCRPCGEEDRCEFDEMCMEDGLSKEKVCLPICDGTEGSCPCDHRCLPKRFELQGEPHSMVVNLCRPPDADPNFLCHGSVLREQERIQCTVPVLVWDQAETESSDRAGAGLGQKPPVRRGRHLDGDGRRGGERVEGRGVVEGE--GEXXXXXXXXXXXXEL-----SAASFSLSVGDRGAVWEGSVEYAPRDCHSAEDCDDGDACSFDACVEGSCVHTGVQEGYGCQAQPVHATWRGDTYRYFQIVDRADPVEQAEFVAEVRAQNKLSSVTFADDYPVEFHNWREFPVYGTKYEDVYISPNGALFVPPLQTVVPGGLSAVSPSTEAYFPVLKADWNPSDSRAASSVLVMIEEDQFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRYMRIGDKADWTAGVSGNSFVSPTIRNRHVRQSQFIQMDENGLPSAAA---------------PSEAFSATPTX-----------------------XXXXXXXXXXXXXXXXXXXXDDASEVQGEGGGSAVTIIANGDGAEEEDGDTEVTLCRAPTLACLARACGKAGSEVPVLWEGVGCRA-AASLNVTFSCRIGGLEVPAVSLEGGATASS-----SGSLAGGF---EEEAWGPDWVGGE-------GGGGLVCEVPRLEWAEAGQDEAVMVPVEVLWSLPEQASDSAKEQVRLGAAGVGVHGLSVLGDAGLINSHVLAFRYYRDDAEAPDCGCSTSPRQTELTCDSCLVCGGDGSTKDCGGFCHGEASVSPCGECSGGMTGVTGGLWCDEYGEYLDGPAEAALLSLSQSIMMLVALSIMTAFLTMCLFLARALMLRGVLAMEGDRHGTLRRRAFSRHRGLSPSELDCLETVEY-STAIDIVSKDKGNDDNSCAADGGGDSSGVELIGEKVSPTSSRSSSGXXXXXXXVESAGVTGG-------------------DDEAFIAQGAEAASSADCAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSAREGLRRN----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPVGAWFRGLPSSLARLFAHSGDGXXXXXXXXXXXGRRQWQRVDD 1313
BLAST of mRNA_P-fluviatile_contig15.2571.1 vs. uniprot
Match: A0A6H5LLL6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLL6_9PHAE) HSP 1 Score: 879 bits (2271), Expect = 3.120e-294 Identity = 549/924 (59.42%), Postives = 625/924 (67.64%), Query Frame = 2
Query: 1679 QIVDRADPAEEADFLAEVRAQDKVSSVTFADDYPVEFHNWVEFPVYGTKYQDIYISPNGALFVPPLQTVVPGGLSAVSPSTEAFFPVLKADWNPSDSRASSSVLLMIGDEQFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRYVRVGDKADWTVGVSGNSFVSPTIRDRHVRQAELIQIDEDGLPVASA------AASAVFPGASAPFPRPSGSFNGSDASDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIEVTLCRAPTVACLGRACGKAGTEIPILWEGFGCRAAAASLNVTFGCRIGGLEVPAVSLEDFSGRSSWAEGGTGHWTGDSPRDRRKVWGPDWAGVDREDRRESAGGGLVCEVPRLEWAEEGQERAVMVPVEVVWFSTEQASASAQQQMRLGASEVAVRGMSVVGDAGAVNSHVLTFRYFRDDVDAPECGCSSTPRQRDVTCDSCLVCGGDDSSKDCGGFCHGEAYVSPCGDCAGGMTGVTGGLWCDDYRDYLDGPAQAALLSLSQSIMMLVALFIMTAFLTTCLFLARALMLRGVLAVERDRHGTLRRRVFPRHRGLSPSELDCLETAEYPAFGVAAADADIGEDEGSGYTDAXXXXXXXXXXXMKLREDSHAVCGSGAGAMAAVRAXXXXGGAAGGEPKEDGGXXXXXXXXXXXXXXXXXXXEEPCADCAICLTGFDSGDMLRKLPCRHFFHQECVDEWLHLSVSCPLCKRSAREGLRRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWWRGLSSYLSRSFTDGGXXXXXXVGRRQWEQVGDXXXXXXXXXXXXXXXXXXXXGGGESPPPGGSEGRRTIRVVNEDLAAFLGGADPSPHVAP 4432
QIVDRADP E+A+F+AEVRAQ+K+SSVTFADDYPVEFHNW EFPVYGTKY+D+YISPNGALFVPPLQTVVPGGLSAVSPSTEA+FPVLKADWNPSDSRA+SSVL++I ++QFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRY+R+GDKADWT GVSGNSFVSPTIR+RHVRQ++ IQ+DE+GLP A+A A + P AP S S + + D EVTLCRAPT+ACL RACGKAG+E+P+LWEG GCRA AASLNVTF CRIGGLEVPAV L + SS +G W G + WGP WAG + GGGLVCEVPRLEWAE GQE AVMVPVEV+W EQAS A++Q+RLGA+ VAV G+SV+GDAG +NSHVL FRY+RDD DAP+CGCS++PRQ ++TCDSCLVCGGD S+KDCGGFCHGEA VSPCG+C+GGMTGVTGGLWCD+YR+YLDGPA+AALLSLSQSIMMLVAL IMTAFLT CLFLARALMLRGVLA+E DRHGTLRRRVF RHRGLSPSELDCLET EY + V+ D G D+ S D K+ + S++ SG+ E K G ADC+ICL GF+ GD+LRKLPC H FHQ+CVDEWLHLSVSCPLCKRSAREGLRR+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXX +W+RGL L+R F G XXXX XXXXXXXX G + P G R +RV+N ++AAF GGA+PSPHV+P
Sbjct: 18 QIVDRADPVEQAEFVAEVRAQNKLSSVTFADDYPVEFHNWREFPVYGTKYEDVYISPNGALFVPPLQTVVPGGLSAVSPSTEAYFPVLKADWNPSDSRAASSVLVVIEEDQFSVLYQDVFLFKRSASATPSTFSTTVFPDGSLRYRYMRIGDKADWTAGVSGNSFVSPTIRNRHVRQSQFIQMDENGLPSAAAPPEAFSATPTLPPSPGAPVSTASNSSDSTSGDDSSEVQQWGEGEAVTIIANGDGAEEEDADT--------------------------------------------EVTLCRAPTLACLARACGKAGSEVPVLWEGVGCRA-AASLNVTFSCRIGGLEVPAVGLGGETTTSS-----SGSWAGGF---EEEAWGPYWAGGE-------VGGGLVCEVPRLEWAEAGQEEAVMVPVEVLWSLPEQASDRAKEQVRLGAAGVAVHGLSVLGDAGLINSHVLAFRYYRDDADAPDCGCSTSPRQTELTCDSCLVCGGDGSTKDCGGFCHGEASVSPCGECSGGMTGVTGGLWCDEYREYLDGPAEAALLSLSQSIMMLVALSIMTAFLTMCLFLARALMLRGVLAMEGDRHGTLRRRVFSRHRGLSPSELDCLETVEY-STAVSIVSKDKGNDDIS-CMDGGGDSSGVELIGEKV-DPSNSRSSSGS------------------EEKRGGVESAGMMGGGDGAFIAQGAEAASSADCSICLGGFEDGDVLRKLPCLHLFHQKCVDEWLHLSVSCPLCKRSAREGLRRN------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXAPTRTPTPVGAWFRGLPPSLARLFAHSGDGXXXXXXXXXXXXXXXXXXXXXXXGEEKFDDDRGDTGNDDGSPLDGET--RRMRVLNANIAAFFGGAEPSPHVSP 852
BLAST of mRNA_P-fluviatile_contig15.2571.1 vs. uniprot
Match: A0A6H5L2U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U7_9PHAE) HSP 1 Score: 216 bits (549), Expect = 1.670e-57 Identity = 94/108 (87.04%), Postives = 103/108 (95.37%), Query Frame = 2
Query: 845 VATAGQALVMTGTGFGEVVADVRVMVGGRDCRDPELCHLVCRPCGDEDRCEFDEMCMEDGLAKEKVCVPICDGTKGSCPCDHRCLPKRFELQGEPRSMVVNLCRPPDA 1168
V AG+AL++ G+GFGE V+DVRVMVGGRDCRDPELCHLVCRPCG+EDRCEFDEMCMEDGL+KEKVC+PICDGT+GSCPCDHRCLPKRFELQGEP SMVVNLCRPPDA
Sbjct: 271 VVKAGEALMVVGSGFGEAVSDVRVMVGGRDCRDPELCHLVCRPCGEEDRCEFDEMCMEDGLSKEKVCLPICDGTEGSCPCDHRCLPKRFELQGEPHSMVVNLCRPPDA 378
BLAST of mRNA_P-fluviatile_contig15.2571.1 vs. uniprot
Match: A0A0A9DQ84_ARUDO (RING-type domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9DQ84_ARUDO) HSP 1 Score: 71.6 bits (174), Expect = 1.950e-11 Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 2
Query: 3839 DCAICLTGFDSGDMLRKLPCRHFFHQECVDEWLHLSVSCPLCKRSARE 3982
+C ICL+ +D G LR+LPC H FH C+D+WLH++ +CPLCK S R+
Sbjct: 20 ECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCKYSVRK 67
BLAST of mRNA_P-fluviatile_contig15.2571.1 vs. uniprot
Match: A0A2P2ISY0_RHIMU (Cleavage and polyadenylation specificity factor n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2ISY0_RHIMU) HSP 1 Score: 71.2 bits (173), Expect = 2.590e-11 Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 2
Query: 3836 ADCAICLTGFDSGDMLRKLPCRHFFHQECVDEWLHLSVSCPLCK 3967
A+C ICL +D GD LR+LPC H FH CVD+WL+++ +CPLCK
Sbjct: 19 AECCICLCAYDDGDELRELPCSHHFHSACVDKWLYINSTCPLCK 62
BLAST of mRNA_P-fluviatile_contig15.2571.1 vs. uniprot
Match: A0A2G5BKA4_COERN (RING-type domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BKA4_COERN) HSP 1 Score: 78.2 bits (191), Expect = 2.680e-11 Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 2
Query: 3842 CAICLTGFDSGDMLRKLPCRHFFHQECVDEWLHLSVSCPLCKRSAREGLRRH 3997
CAICL +D GD+LR LPC H HQ+CVDEWLH++ SCPLCKR H
Sbjct: 257 CAICLCEYDDGDILRLLPCNHHLHQKCVDEWLHINQSCPLCKRVVTSDSEHH 308
BLAST of mRNA_P-fluviatile_contig15.2571.1 vs. uniprot
Match: A0A699K2M5_TANCI (E3 ubiquitin-protein ligase At1g63170-like (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699K2M5_TANCI) HSP 1 Score: 69.7 bits (169), Expect = 6.470e-11 Identity = 26/49 (53.06%), Postives = 35/49 (71.43%), Query Frame = 2
Query: 3842 CAICLTGFDSGDMLRKLPCRHFFHQECVDEWLHLSVSCPLCKRSAREGL 3988
C ICL + + D LR+LPC HFFH++CVD+WL ++ SCPLCK E +
Sbjct: 2 CCICLAKYANNDELRELPCTHFFHKDCVDKWLKINASCPLCKSEVGESV 50
BLAST of mRNA_P-fluviatile_contig15.2571.1 vs. uniprot
Match: A0A5B8MYU6_9CHLO (RING-type E3 ubiquitin transferase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYU6_9CHLO) HSP 1 Score: 75.9 bits (185), Expect = 8.190e-11 Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 2
Query: 3839 DCAICLTGFDSGDMLRKLPCRHFFHQECVDEWLHLSVSCPLCKRSAREGLR 3991
DC++C+ F+ GD +R+LPC H FH ECVDEWL L SCP+C+ R+ L+
Sbjct: 112 DCSVCMEAFEEGDRIRELPCGHMFHLECVDEWLKLHPSCPICREDVRDALK 162
BLAST of mRNA_P-fluviatile_contig15.2571.1 vs. uniprot
Match: A0A261Y600_9FUNG (RING-type domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y600_9FUNG) HSP 1 Score: 76.6 bits (187), Expect = 8.580e-11 Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 2
Query: 3836 ADCAICLTGFDSGDMLRKLPCRHFFHQECVDEWLHLSVSCPLCKRSA 3976
A CAIC+ ++ GD+LR LPCRH FHQ CVDEW+ L+ +CPLCK+SA
Sbjct: 292 AVCAICICDYEQGDLLRLLPCRHHFHQSCVDEWMSLNRACPLCKQSA 338
BLAST of mRNA_P-fluviatile_contig15.2571.1 vs. uniprot
Match: A0A7S0Y4G8_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y4G8_HEMAN) HSP 1 Score: 71.2 bits (173), Expect = 9.160e-11 Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 2
Query: 3839 DCAICLTGFDSGDMLRKLPCRHFFHQECVDEWLHLSVSCPLCK 3967
+C ICLT ++ GDM + LPC H FH ECVDEWL +S SCP+CK
Sbjct: 62 NCIICLTDYEEGDMTKLLPCMHVFHSECVDEWLAISRSCPMCK 104 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2571.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig15.2571.1 >prot_P-fluviatile_contig15.2571.1 ID=prot_P-fluviatile_contig15.2571.1|Name=mRNA_P-fluviatile_contig15.2571.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1268bp MTGTGFGEVVADVRVMVGGRDCRDPELCHLVCRPCGDEDRCEFDEMCMEDback to top mRNA from alignment at P-fluviatile_contig15:2425979..2441123+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig15.2571.1 ID=mRNA_P-fluviatile_contig15.2571.1|Name=mRNA_P-fluviatile_contig15.2571.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=15145bp|location=Sequence derived from alignment at P-fluviatile_contig15:2425979..2441123+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig15:2425979..2441123+ >mRNA_P-fluviatile_contig15.2571.1 ID=mRNA_P-fluviatile_contig15.2571.1|Name=mRNA_P-fluviatile_contig15.2571.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7608bp|location=Sequence derived from alignment at P-fluviatile_contig15:2425979..2441123+ (Porterinema fluviatile SAG_2381)back to top |