mRNA_P-fluviatile_contig15.2568.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig15.2568.1 vs. uniprot
Match: A0A6H5KE17_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE17_9PHAE) HSP 1 Score: 512 bits (1318), Expect = 2.260e-158 Identity = 469/1024 (45.80%), Postives = 574/1024 (56.05%), Query Frame = 1
Query: 7 SDGFPEGGSQGSASACKSKHLQRGIPSFKLIDDDHVRPKRFCDRAPSTDDQEDIVGSEGAASISTLLSRDGRSPPPDAVPGPRRVPSFILATDVFRMSHNSSWGSGSGNSMLGVCSASVDGDGEDVVQRLDDENFNDPNFLTMAGIGPSDRAGPTQREPLDAAIDAKFFKFCGTATRGEKHRYAPEIYGQ------DHAQMRVPKEETVSNPIVSRVSRARDGMSTPDFLGRAAS--DVQSCTSIARRDSGQGVSETNVFDLEAGVPAFEASVKEYFDRQLEAAEKSLDHLAGDGQAFAPIADG------LGGDGSTFGETRHFFMDAIVGGAGFSPNIAPRQSAMVKSELDLNLDLDLHAPGGGAVQDDAIRRPVAQAKQALEKPRVVERRVSTQRSSKREQRIPHPYHRGSEEGEPEGSQS-EYEPPAPP-RQAKVRKERGKARVAXXXXXXXXXXRAAKASG-RTPGACKAAISKARRRRGSAKRQTSEDVAARLPLHVLECFYHIPLNVAAKELEVSLTMLKKLCRTYGVKRWPHRQVSSLDKITTRLEEKIKARTDGGKEAPTLVTKLTQAQKRRSVIIKTASAGLDANILNSIFNCRPGEIDEDMLLSSTDVAKAVEQMKSTLEVGNKGSGSESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPAXXXXXQHTSNAAARAETFGRKEIATAPFSCKPPTTAAAAFEPIPASPPAFKLDGRTKVI-------------AATKKSN--LKTGGKACVTAKAVVQRPSMPA-RWTGKATVSSSPSSAKGRRTGTAAA-RTVPLADSNAAAEQRNSSAEMAASSDSQVFDGPGVDFSPGGDSDFTLAAAE-----ALLAPA---SPVSSFGTSPHSSAHRVAYSGVFGTNTHHRPSS-ASSRGGGSTAIARKTSVGGSF-EWPTAASHLSGGESDPSVQQRS---AWGRAGGEWAM-THAEWYGSVSSSKSSPLQQHI--ASVDSPTATATLDSFNFKLSLESPPQGPQQTS 2928
S G + SQ +SA S+ LQRGIPSFKL DD+ R KRF +R PS ++ +EG + T G +P PGPR V SF LA+DVFRMSHNSSWGSG+G + G ASVDG+GED VQRLDD ND NF TM GIGP + RE L +D K ++ G RY+ E G D Q+ V KEE V IV A + L RA+S DV S+ RDS + E NVF LE G+P F A+++EY +RQLEAAE SLD AGD +A + D +GG G T GE H + G AG SP P +S +VKSE + G +Q + + + LE + ERR +R +++ EYEPP+ R+ KV+K RG+ R A XXXXXX SG RT A A + RR S KRQTSEDVAARLPL VLECFYH+PLNVAA++L VSLTMLKKLCR YGVKRWPHRQVSSLDK T++LE+KIKAR DGGK+AP+LV KLTQA+KRR VIIKTASAGLD ++LNSIF CRPG+IDEDMLL STDVAKAVE+++ +KGSG+ES+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX + RA G T FS KPP A + P PPAF+ GR A K ++ L +G K C+ A + P+ PA R+ G A+++ AKGR+ TAAA R++ A A+ Q+ +A AA+ A +PA SPV S G PH A ++YSGVFG H SS ASSRGG A + SVGGS + P +A +G + V+Q + AW GG+ A ++ EW G S +SSP QQH+ A DSPT TATLDSF+ KLSLESPP+GP Q S
Sbjct: 5 SSGLEDSRSQAPSSASSSR-LQRGIPSFKLSDDELARSKRFRNRVPSDGSRDGAGSNEGGGATPTTTL--GGTP----APGPRSVSSFTLASDVFRMSHNSSWGSGTGGNFFGFGPASVDGEGEDAVQRLDDATLNDLNFFTMEGIGPGNLPETAPRETLGPGLDTKPTDTRSSSDGGGPDRYSIEGDGSHGGPRSDLVQLAVAKEEMVVPAIVDGTGSASN------ILRRASSARDVLRSGSMGGRDSNRDFLEGNVFGLEEGLPTFSAAMEEYLNRQLEAAEHSLDDPAGDERALGCMTDARDGGASVGGSGGT-GEEXHL---GVAGRAGASPIRNPTRSVVVKSECSRS-----RGASAGVLQGTTYSQRTQEEGRGLEA-KATERRTRYKRGAQQXXXXXXXXXXXXXXXXXXXXXXXEYEPPSCTLREGKVKKGRGRRRGAAATTXXXXXXXXXXXSGVRTASASSAFL----RRGSSLKRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIKARRDGGKDAPSLVRKLTQARKRRKVIIKTASAGLDVSVLNSIFTCRPGDIDEDMLLLSTDVAKAVEKIQFRQHADHKGSGAESDSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAKKTSRIRAVFAG-----TPAFSSKPPAVAKSVASP----PPAFEPGGRXXXXXXXXXXXXXXXKTAGNKPTSGSLGSGRKLCMKAGS----PAEPAKRFKGDASMT-----AKGRKGVTAAAARSMSSAGRRASFPQKKCTAATAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTAACSPADSTSPVFSIGRPPHIRAPMISYSGVFGVGLRHTASSRASSRGGDPMAFTKVRSVGGSSGQTPVSALVTAGECASSQVRQAARAPAWIGGGGKRAKGSYGEWRGGALSLRSSPSQQHLSDAGSDSPTTTATLDSFDLKLSLESPPRGPPQAS 983
BLAST of mRNA_P-fluviatile_contig15.2568.1 vs. uniprot
Match: D7FS12_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS12_ECTSI) HSP 1 Score: 459 bits (1180), Expect = 2.440e-142 Identity = 311/638 (48.75%), Postives = 377/638 (59.09%), Query Frame = 1
Query: 19 PEGGSQGSASAC----KSKHLQRGIPSFKLIDDDHVRPKRFCDRAPSTDDQEDIVGSEGAASISTLLSRDGRSPPPDAVPGPRRVPSFILATDVFRMSHNSSWGSGSGNSMLGVCSASVDGDGEDVVQRLDDENFNDPNFLTMAGIGPSDRAGPTQREPLDAAIDAKFFKFCGTATRGEKHRYAPEIYG------QDHAQMRVPKEETVSNPIVSRVSRARDGMSTPDFLGRAAS--DVQSCTSIARRDSGQGVSETNVFDLEAGVPAFEASVKEYFDRQLEAAEKSLDHLAGDGQAFAPIA---DGLGGDGSTFGETRHFFMDAIVGGAGFSPNIAPRQSAMVKSELDLNLDLDLHAPGGGAVQDDAIRRPVAQAKQALEKPRVVERRVSTQRSSKREQRIPHPYHRGSEEGE-PEGSQSEYEPPA-PPRQAKVRKERGKARVAXXXXXXXXXXRAAKASGRTPGACKAAISKA-RRRRGSAKRQTSEDVAARLPLHVLECFYHIPLNVAAKELEVSLTMLKKLCRTYGVKRWPHRQVSSLDKITTRLEEKIKARTDGGKEAPTLVTKLTQAQKRRSVIIKTASAGLDANILNSIFNCRPGEIDEDMLLSSTDVAKAVEQMKSTLEVGNKGSGSESE 1878
P GG Q S S S LQRGIPSFKL DD+ R KRF +R PS D D GS + + +G PGPR V SF LA+DVFRMSHNSSWGSG+G++ G SVDG+GED VQR DD FND NF TM GIGPSD RE +D K + G RY+ E G D Q V KEE V IV A + L RA+S DV S++ RDS + E NVFDLE G+P F +++EY +RQLEAAE SLD AGD +AF +A DG G G + + G G SP P +S +VK E + G +Q + + LE + ERR +R +++++ E + SQSEYEPP PR+ K +K RG+ R A RAAK S + G A++S A RR GS KRQTSEDVAARLPL VLECFYH+PLNVAA++L VSLTMLKKLCR YGVKRWPHRQVSSLDK T++LE+KIK R DGGK+AP+LV KLTQA+KRR VIIKTASAGLDA++LNSIF CRPG+IDEDMLLSSTDVAKAVE+++ + +KGSG+ES+
Sbjct: 4 PSGGLQDSRSQAPSLASSSRLQRGIPSFKLSDDELARSKRFRNRVPS-DGSRDGAGSHEGGGPTPTTTLEGIP-----APGPRSVSSFTLASDVFRMSHNSSWGSGTGSNFFGFGLPSVDGEGEDAVQRFDDATFNDLNFFTMEGIGPSDLPETAPRETSGPGLDTKPTDTRSSTDGGGPDRYSIERGGTHGGPRSDPLQPAVAKEEMVVPAIVDGTGSASN------ILRRASSARDVLRSASMSGRDSNRDFLEGNVFDLEGGLPTFSTAMEEYLNRQLEAAEHSLDDPAGDERAFGCMAGARDGGAGVGXXXXXXXXXXL-GVAGRVGASPIEHPTRSVVVKQECRRS-----RGASDGVLQGTTHSQCTQEEGGGLET-KAAERRTRCKRGTQQQKXXXXXXXXXXXXXEYADSSQSEYEPPTCTPREGKAKKGRGRRRGAAATTAT----RAAKTSSGSSGVRTASVSSAFLRRGGSLKRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIKTRRDGGKDAPSLVRKLTQARKRRKVIIKTASAGLDASVLNSIFTCRPGDIDEDMLLSSTDVAKAVEKVQFRQDADHKGSGAESD 618
BLAST of mRNA_P-fluviatile_contig15.2568.1 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA) HSP 1 Score: 143 bits (360), Expect = 3.050e-36 Identity = 75/118 (63.56%), Postives = 91/118 (77.12%), Query Frame = 1
Query: 1414 KRQTSEDVAARLPLHVLECFYHIPLNVAAKELEVSLTMLKKLCRTYGVKRWPHRQVSSLDKITTRLEEKIKARTDGGKEAPTLVTKLTQAQKRRSVIIKTASAGLDANILNSIFNCRP 1767
KRQTSE+VA RLP+ VLE FYH+PLN+AA+EL VSLTMLKKLCR YG+KRWPHRQVSSL+K +LEEKI +D K A L K + +R +IIKTASAGLD ++LN++F RP
Sbjct: 2 KRQTSEEVAKRLPVSVLEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSLNKSLGKLEEKILGASDD-KAAAALRAKAGPLRTKRELIIKTASAGLDPDVLNAVFAARP 118
BLAST of mRNA_P-fluviatile_contig15.2568.1 vs. uniprot
Match: A0A836CMG7_9STRA (RWP-RK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG7_9STRA) HSP 1 Score: 110 bits (276), Expect = 3.610e-21 Identity = 57/128 (44.53%), Postives = 83/128 (64.84%), Query Frame = 1
Query: 1417 RQTSEDVAARLPLHVLECFYHIPLNVAAKELEVSLTMLKKLCRTYGVKRWPHRQVSSLDKITTRLEEKIKARTDGGKEAPTLVTKLTQAQKRRSVIIKTASAGLDANILNSIFNCRPGEIDEDMLLSS 1800
RQ S +V R+ L VLE Y PL AA+ L VS TMLKKLCR YG++RWPHRQ+ S++K + + +A+ + ++ QK+R++++KTAS GL+A++ ++IF RPGE+D D L SS
Sbjct: 90 RQNSREVGQRITLSVLEACYGEPLTAAARRLGVSNTMLKKLCRRYGIQRWPHRQIRSIEKEVQKHMQ-ARAQATSAVDIAACDERIALLQKKRAIVVKTASCGLNASLRSAIFMARPGELDADQLFSS 216
BLAST of mRNA_P-fluviatile_contig15.2568.1 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.900e-17 Identity = 47/128 (36.72%), Postives = 82/128 (64.06%), Query Frame = 1
Query: 1438 AARLPLHVLECFYHIPLNVAAKELEVSLTMLKKLCRTYGVKRWPHRQVSSLDKITTRLEEKIKARTDGGKEAPTLVTKLTQAQKRRSVIIKTASAGLDANILNSIFNCRPGEIDEDMLLSSTDVAKAV 1821
A + L +L+ FY++PL AKEL +SLT+LKK+CR YG++RWPHRQ+ S++K L E+I T + A L ++L +K++ ++ + AS+GL + + N++F P +++ED + + A ++
Sbjct: 11 ADNITLELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSINKSAQELTERINGATSHEERAE-LQSQLHLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEDAVFDAPGAAPSM 137
BLAST of mRNA_P-fluviatile_contig15.2568.1 vs. uniprot
Match: A0A7S3YET5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YET5_HETAK) HSP 1 Score: 93.2 bits (230), Expect = 2.720e-16 Identity = 44/122 (36.07%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 1417 RQTSEDVAARLPLHVLECFYHIPLNVAAKELEVSLTMLKKLCRTYGVKRWPHRQVSSLDKITTRLEEKIKARTDGGKEAPTLVTKLTQAQKRRSVIIKTASAGLDANILNSIFNCRPGEIDE 1782
RQ ++ R+PLH+LE Y +PL A ++ VSLTM+K++CR Y +KRWPHRQ+ S+ K +L++++ +A ++ ++ ++++S+I K AS GL+A + +F PGE+++
Sbjct: 243 RQNFDENLKRIPLHILESKYELPLKEVADQIGVSLTMMKQICRHYKIKRWPHRQMKSIMKTLHQLKDRLNMVDPNSSDAQEIMRQVQLTEQKKSLITKMASRGLNAEERSLLFLSHPGELNK 364
BLAST of mRNA_P-fluviatile_contig15.2568.1 vs. uniprot
Match: A0A835YN08_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN08_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 5.300e-16 Identity = 43/105 (40.95%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 1453 LHVLECFYHIPLNVAAKELEVSLTMLKKLCRTYGVKRWPHRQVSSLDKITTRLEEKIKARTDGGKEAPTLVTKLTQAQKRRSVIIKTASAGLDANILNSIFNCRP 1767
L +L+ ++ PL A+E VSLTM+K+LCR G++RWPHRQ+ SLDK+ LEE+I A T +E L ++ +K+R ++ + AS+GL + + N++F P
Sbjct: 5 LELLQSRFNTPLVDVAREFRVSLTMMKRLCRKLGIQRWPHRQIRSLDKLLFELEERISA-TTSARELSYLQEQVALLEKKRRLVTRGASSGLQSALRNALFMADP 108
BLAST of mRNA_P-fluviatile_contig15.2568.1 vs. uniprot
Match: A0A835YW93_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW93_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 5.640e-15 Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 1
Query: 1417 RQTSEDVAARLPLHVLECFYHIPLNVAAKELEVSLTMLKKLCRTYGVKRWPHRQVSSLDKITTRLEE 1617
RQ+S +V+ R+ L VLE Y+IPL AAK+L+VS TMLKKLCR YG++RWPHRQ+ S+DK + +E
Sbjct: 2 RQSSREVSQRVSLAVLEGCYNIPLTAAAKKLKVSNTMLKKLCRRYGIQRWPHRQIRSIDKEMQKHQE 68
BLAST of mRNA_P-fluviatile_contig15.2568.1 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 8.910e-15 Identity = 41/116 (35.34%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 1438 AARLPLHVLECFYHIPLNVAAKELEVSLTMLKKLCRTYGVKRWPHRQVSSLDKITTRLEEKIKARTDGGKEAPTLVTKLTQAQKRRSVIIKTASAGLDANILNSIFNCRPGEIDED 1785
A ++ L +L+ +Y++PL AKEL +SLT+LKK+CR +G++RWPHRQ+ SL+K L+E+ + + A + +L +K++ ++ + AS+GL + + N++F P +++E+
Sbjct: 8 ADQITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSLNKTAQELKERAQCALTAEEHAE-IEAQLQLLEKKKRLVTRGASSGLQSALRNALFLANPEQLEEE 122
BLAST of mRNA_P-fluviatile_contig15.2568.1 vs. uniprot
Match: H6WBB7_VAULI (Putative NIN-like transcription factor n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB7_VAULI) HSP 1 Score: 87.8 bits (216), Expect = 1.070e-14 Identity = 48/152 (31.58%), Postives = 86/152 (56.58%), Query Frame = 1
Query: 1414 KRQTSEDVAARLPLHVLECFYHIPLNVAAKELEVSLTMLKKLCRTYGVKRWPHRQVSSLDKITTRLEEKIKARTDGGKEAPTLVTKLTQAQKRRSVIIKTASAGLDANILNSIFNCRPGEIDEDMLLSSTDVAKAVEQMKSTLEVGNKGSGS 1869
++ T++ + L +L+ +Y++PL AKEL +SLT+LKK+CR +G++RWPHRQ+ S++K L E+I + + E L ++ +K+R ++ K AS+GL + N+IF P + E+ + ++ + + K SGS
Sbjct: 3 RQSTTQIEPEEITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSINKNIQDLNERINS-VNSPDEHAELRNQIGLLEKKRRLVTKGASSGLHTAMRNAIFLANPEHLQEESMFEGLHRFPQLQTPQQHPSIDRKPSGS 153 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig15.2568.1 >prot_P-fluviatile_contig15.2568.1 ID=prot_P-fluviatile_contig15.2568.1|Name=mRNA_P-fluviatile_contig15.2568.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1139bp MASDGFPEGGSQGSASACKSKHLQRGIPSFKLIDDDHVRPKRFCDRAPSTback to top mRNA from alignment at P-fluviatile_contig15:2401513..2406882+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig15.2568.1 ID=mRNA_P-fluviatile_contig15.2568.1|Name=mRNA_P-fluviatile_contig15.2568.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5370bp|location=Sequence derived from alignment at P-fluviatile_contig15:2401513..2406882+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig15:2401513..2406882+ >mRNA_P-fluviatile_contig15.2568.1 ID=mRNA_P-fluviatile_contig15.2568.1|Name=mRNA_P-fluviatile_contig15.2568.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6834bp|location=Sequence derived from alignment at P-fluviatile_contig15:2401513..2406882+ (Porterinema fluviatile SAG_2381)back to top |