mRNA_P-fluviatile_contig15.2525.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig15.2525.1 vs. uniprot
Match: A0A6H5KLN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLN8_9PHAE) HSP 1 Score: 827 bits (2137), Expect = 2.030e-287 Identity = 462/706 (65.44%), Postives = 522/706 (73.94%), Query Frame = 3
Query: 576 MSVNQEAEPELANRSRG-RGHRRSESEAGSGAFGV-PRSFNSTSYDSPRWKSGSNNSKQ----RYGWKANDSNFASQEDDGSPKLVSLADLIRNEDKVPATLLYEHAGDTDVAMDPRDTGGGGFPHQAMKGGAVGMQEALQAAEHGNSIRLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNEGYASCVSELLAAGADPNVTSSSLGYTPLMSAAFTGSRECCWLLLRAGARLDMKADDGRTAFDFAQKARHLG---AGGDIDSVLAVLRDPPKKIPRSPTLVIATLSERSRLEPEEEVPPVEVRWRVPSQASLAPTMCGEVERFYVKTWCRGKGKEAIRTKTSTATVPRRDFCRNQIIDRGIALRKNLCLPQSHTTSIIIHGLQAGEIYSFTVSCVAEIEGALRHSPPSCMSKPLLIPESKEEHQWRLGGLLQSLNGKEISSPGPTGES-AHPQAQARRGAEVSPTTFPQRRQFERPLQNFSVSWAQDDLAPEIGLRQPASYRLANGVNTSPLGGFGRTLPARASAAVPARRRSQVKHAWPPRDGTNQTPSQCFHVILLRKTAEIACAEASSVWFAPLPHSLSSLLSPLIQSYAFPASEADSILQMTAAEQPFRSSFGGPGYSSPGASPPLEEGTELQP-FPKTNSKSSCARA------LP---NRSSRALYASEAFQEEDCSIS 2633
MS+N + EPE+A R G R HRRSESEA SGAFG PR F+STSYDSPRW+ G N ++ RYGW+AND N AS DD +P+LVSLADLIR EDKVPATLLYEH GDTD MD RD GG HQAM GGAVGMQEALQAAEHGNS+RLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCN+GY +CVSELLAAGADPN+TSSSLGYTPLMSAA TGS+ECCWLLLRAGARLDM+ADDGRTAFDFAQKARHLG +GG DSVL VLR+PPKKIPRSPT+VIATL+ERS LEPEEEVPPVEVRWRVPSQASLAPT+CG+VERFY+KTWCRGKGKE IRTKTSTA VPRRDFCRNQIIDRGIALRKNLCLPQS TTS I+HGL+AG +YSFTVSCVAE+EGALRHSPPSCMSKPLLIPESKE+HQWRLGG+LQ + GK+ S G TGE A PQ RR SPT+ QRR P ++FSVSWA+DD+AP I RQPASYR+++ V SP G FGR+L + AS P KHA P V+ LR+ + QSYA A+ AD+ LQ + A++ R+S + P S LEEGTE +P F + A+ P + +S ASE +++ CS+S
Sbjct: 1 MSLNHQGEPEVAGRKTGNRAHRRSESEA-SGAFGGGPRPFSSTSYDSPRWRGGGANKQRGSGGRYGWRANDGNNASPADDENPRLVSLADLIRKEDKVPATLLYEHPGDTDAPMDARDIEAGGLTHQAMNGGAVGMQEALQAAEHGNSVRLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYVTCVSELLAAGADPNITSSSLGYTPLMSAALTGSKECCWLLLRAGARLDMRADDGRTAFDFAQKARHLGGGSSGGIHDSVLDVLREPPKKIPRSPTMVIATLAERSSLEPEEEVPPVEVRWRVPSQASLAPTLCGDVERFYLKTWCRGKGKEVIRTKTSTADVPRRDFCRNQIIDRGIALRKNLCLPQSQTTSAIVHGLRAGGVYSFTVSCVAEVEGALRHSPPSCMSKPLLIPESKEDHQWRLGGMLQMVTGKDTPSSGTTGEGGAAPQV--RRVTNQSPTSIDQRR---GPAKSFSVSWAKDDIAPTIDQRQPASYRVSDDVIVSPSGDFGRSLTSNASEWEP-------KHASP--------------VVPLRRRS---------------------------QSYASSATRADTFLQTSTADETIRASM---AFPPPSTSSHLEEGTEARPLFGDMTPHAGRAQGEMGGGGTPLTFSTNSSGFEASEFYEDGGCSVS 649
BLAST of mRNA_P-fluviatile_contig15.2525.1 vs. uniprot
Match: D7FV58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV58_ECTSI) HSP 1 Score: 596 bits (1536), Expect = 2.510e-201 Identity = 307/377 (81.43%), Postives = 329/377 (87.27%), Query Frame = 3
Query: 576 MSVNQEAEPELANRSRG-RGHRRSESEAGSGAFGV-PRSFNSTSYDSPRWKSGSNNSKQ----RYGWKANDSNFASQEDDGSPKLVSLADLIRNEDKVPATLLYEHAGDTDVAMDPRDTGGGGFPHQAMKGGAVGMQEALQAAEHGNSIRLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNEGYASCVSELLAAGADPNVTSSSLGYTPLMSAAFTGSRECCWLLLRAGARLDMKADDGRTAFDFAQKARHLG---AGGDIDSVLAVLRDPPKKIPRSPTLVIATLSERSRLEPEEEVPPVEVRWRVPSQASLAPTMCGEVERFYVKTWCRGKGKEAIRTKTSTATVPRRDFCRNQ 1679
MS+NQ+ EPE+A+R G R HRRSESEA SGAFG PR F STSYDSPRW+ G N ++ RYGW+AND N S DD +P+LVSLADLIR EDKVPATLLYEH GDTD MD RD GG HQAM GGAVGMQEALQAAEHGNS+RLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCN+GY +CVSELLAAGADPN+TSSSLGYTPLMSAA TGS+ECCWLLLRAGARLDM+ADDGRTAFDFAQKARHLG +GG DSVL VLR+PPKKIPRSPTLVIA L+ERS LEPEEEVPPVEVRWRVPSQASLAPT+CG+VERFY+KTWCRGKGKE IRTKTST VPRRDFCRNQ
Sbjct: 1 MSLNQQGEPEVADRKTGNRAHRRSESEA-SGAFGGGPRPFTSTSYDSPRWRGGGANKQRGSGGRYGWRANDGNNVSPADDENPRLVSLADLIRKEDKVPATLLYEHPGDTDAPMDARDIEAGGLTHQAMNGGAVGMQEALQAAEHGNSVRLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYVTCVSELLAAGADPNITSSSLGYTPLMSAALTGSKECCWLLLRAGARLDMRADDGRTAFDFAQKARHLGGGSSGGTHDSVLDVLREPPKKIPRSPTLVIAALAERSSLEPEEEVPPVEVRWRVPSQASLAPTLCGDVERFYLKTWCRGKGKEVIRTKTSTVDVPRRDFCRNQ 376
BLAST of mRNA_P-fluviatile_contig15.2525.1 vs. uniprot
Match: A0A835YST7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST7_9STRA) HSP 1 Score: 334 bits (856), Expect = 1.370e-95 Identity = 208/525 (39.62%), Postives = 266/525 (50.67%), Query Frame = 3
Query: 798 GSPKLVSLADLIRNEDKV------PATLLYEHAGDTDVAMDPR--DTGGGGFPHQAMKGGAVGMQEALQAAEHGNSIRLSKFLQDGGNPDTLSRLHHLRWSLLHLAAG------------------------CSSMGGRLAFA--SHRRRPEPDCNEGYASCVSELLAAGADPNVTSSSLGYTPLMSAAFTGSRECCWLLLRAGARLDMKADDGRTAFDFAQKARHLGAGGDIDSVLA--------------------------------------------------------------VLRDPPKKIPRSPTLVIATLSERSRLEPEE-------------------------------------------EVPPVEVRWRVPSQASLAPTMCGEVERFYVKTWCRGKGKEAIRTKTSTATVPRRDFCRNQIIDRGIALRKNLCLPQSHTTSIIIHGLQAGEIYSFTVSCVAEIEGALRHSPPSCMSKPLLIPESKEEHQWRLGGLLQSLNGKEISSPGPTGE 1955
G+ KL+SL+DLIR E+ PA LLY + G+ +D D GGG +A+ GAVG QEALQAAEHGNS L++FLQD G+P T SRLHH+RWSLLHLAAG C+ MG L+ A +HR RPEPDCN+GYA+C++ LLAAGADPN TS GYTPLM AA TGS E CWLLLRAGA + G+TA DFAQ R G + L VL++PP+ +PRSP V+A L++RS ++ E EVRW +PSQASL P CG ER+ VK W +G+ + +RT T + PRRDFC++ +DRGIALR NL L T S IIH L+ G YSFTVS +AE++GAL+ SPPS +SK + IP++K++ QW +GG+L + + + GP E
Sbjct: 181 GTEKLMSLSDLIRREEGGRTRGGGPAPLLYSNEGEAGELLDGDGFDKGGG---RKAVNNGAVGTQEALQAAEHGNSALLARFLQDNGDPRTTSRLHHMRWSLLHLAAGFNXXXXXXXXXXXXXXXXXXXXXGCAGMGSALSLAGAAHRSRPEPDCNDGYAACIALLLAAGADPNATSIQGGYTPLMGAAVTGSAESCWLLLRAGANPLARTAAGQTALDFAQTPRAGAPAGAHQAALKXXXXXXXXXXXXXXXXTALDFAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLQNPPRLVPRSPLQVVARLADRSLVDEEPCRRCLXXXXXXXXXXXXXXXXEASHGFRLVTRSQEDDSQCVEXXXXXXEVRWLIPSQASLLPAHCGAAERYLVKCWSQGQASDVVRTNTGNSLKPRRDFCKHGAMDRGIALRNNLSLQAPRTASTIIHNLRPGREYSFTVSLLAEVDGALQQSPPSAVSKTIYIPKTKDDAQWSVGGVLSKMMPRAQGTDGPLDE 702
BLAST of mRNA_P-fluviatile_contig15.2525.1 vs. uniprot
Match: A0A7S2CTM4_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTM4_9STRA) HSP 1 Score: 314 bits (805), Expect = 2.810e-92 Identity = 169/329 (51.37%), Postives = 223/329 (67.78%), Query Frame = 3
Query: 951 GAVGMQEALQAAEHGNSIRLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNEGYASCVSELLAAGADPNVTSSSLGYTPLMSAAFTGSRECCWLLLRAGARLDMKADDGRTAFDFAQKARHLGAGGDIDSVLAVLRDPPKKIPRSPTLVIATLSERSRLEPEEEVPPVEVRWRVPSQASLAPTMCGEVERFYVKTWCRGKGKEAIRTKTSTATVPRRDFCRNQIIDRGIALRKNLCLPQSHTTSIIIHGLQAGEIYSFTVSCVAEIEGALRHSPPSCMSKPLLIPESKEEHQWRLGGLLQSLNGKEISS 1937
GAV Q+AL+AAEHGNS L+ +L GG+P +SRLHH+ WSLLHLA GC+ MGG ++R RPEPDC G+A+CVS L+AAGADPNV S YTPLM A+ +G +CC LLL+AGA + A DG+TA D A ++R A G + VL VL +PP+ +PRSP V A L + E E+ VEVRW++P+ S+A CGE++R+ V+T+ +G+ E + + RRDFC+NQ++DRGIALR+NL LPQ T S +IHGL G Y FTVSC+AEI+G++R SPPS MSKPL IP S EE +W +G +L + IS+
Sbjct: 16 GAVSTQDALKAAEHGNSDVLAAYLHAGGDPMAVSRLHHMGWSLLHLATGCALMGG--ISNTYRTRPEPDCPNGFATCVSLLMAAGADPNVASKQGHYTPLMGASLSGDADCCRLLLQAGAIVKHMALDGQTALDAANRSRF--ADGHM-RVLQVLGNPPRLLPRSPLEVTARLLDY--YEGEDRERDVEVRWKIPTTTSMALVKCGEIQRYVVRTYVKGQELEVMHSAVGPGRRQRRDFCQNQVVDRGIALRQNLALPQPRTASTLIHGLIPGVTYHFTVSCIAEIDGSIRDSPPSLMSKPLDIP-SYEEEEWNIGEILDKVFAYNISN 336
BLAST of mRNA_P-fluviatile_contig15.2525.1 vs. uniprot
Match: A0A8J2SBP4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SBP4_9STRA) HSP 1 Score: 144 bits (364), Expect = 5.590e-34 Identity = 104/261 (39.85%), Postives = 138/261 (52.87%), Query Frame = 3
Query: 810 LVSLADLIRNEDKVPATLLYEHAGDTDVAMDPRDTGGGGFPHQAMKGGAVGMQEALQAAEHGNSIRLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNEGYASCVSELLAAGADPNVTSSSLGYTPLMSAAFTGSRECCWLLLRAGARLDMKADDGRTAFDFAQKARHLGAGGDIDSVLAVLRDPPKKIPRSPTLVIATLSERSRLEPEEEVPPVEVRWRVPSQASLAPTMCGEVERFYVK 1592
+ SL++LI D+ P L ++A M T P + A Q+AL+AAEHG++ L+ +L++GG+P SRLHH+ WSLLHLAAGC+ GG A ++RRRPEPD G+A CV LLAAGA+P + PL A G LLLRAGA + + A RH A + +++ +L PPK +PRSP V A LSE + E V VEVRWR P A G VER+ V+
Sbjct: 1 MQSLSELI---DETPPDRLRDNASPDAQRMRASATTEEPPPTAPPRRIAPSTQDALEAAEHGDARALAAYLENGGDPAATSRLHHMGWSLLHLAAGCALAGGPGAAQAYRRRPEPDAPGGFARCVELLLAAGAEP--ATGDERPAPLAGAVLCGDAASARLLLRAGAAAPTEVE--------APPGRHTAA--EREAMRELLAAPPKLLPRSPLRVEAKLSEYVEGDARERV--VEVRWRPPPPAPGV----GPVERYVVR 240
BLAST of mRNA_P-fluviatile_contig15.2525.1 vs. uniprot
Match: A0A7S2XYK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYK3_9STRA) HSP 1 Score: 117 bits (293), Expect = 9.310e-27 Identity = 59/129 (45.74%), Postives = 79/129 (61.24%), Query Frame = 3
Query: 1566 GEVERFYVKTWCRGKGKEAIRTKTSTATVPRRDFCRNQIIDRGIALRKNLCLPQSHTTSIIIHGLQAGEIYSFTVSCVAEIEGALRHSPPSCMSKPLLIPESKEEHQWRLGGLLQSLNGKEISSPGPTG 1952
GEV ++ VK W GK + I T RRDFC+N +++RGIALR+NL LP T S I+H L G YSFTVS +AE++G L SPPSCMS+ + IP +E +W +G + + S+P PTG
Sbjct: 1 GEVIKYVVKCWGNGKMVDVIHATTGVGRGQRRDFCQNGVMNRGIALRQNLNLPPPQTASTIVHNLMPGLHYSFTVSAIAELDGVLCESPPSCMSRVVQIPVRDKEDRWMMGEVFNMM-----STPNPTG 124
BLAST of mRNA_P-fluviatile_contig15.2525.1 vs. uniprot
Match: A0A7S4D9X9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9X9_HETAK) HSP 1 Score: 95.9 bits (237), Expect = 3.450e-19 Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 3
Query: 1656 RRDFCRNQIIDRGIALRKNLCLPQSHTTSIIIHGLQAGEIYSFTVSCVAEIEGALRHSPPSCMSKPLLIPESKEEHQWRLGGLLQSLNGKEISSP 1940
RRDFC + ++DRG+ALR+NL LP S ++H L+ G YSFTVSCVA + G L SPPS +S+ + +P++++E +W LG + K+ P
Sbjct: 30 RRDFCEDTVVDRGVALRRNLGLPPPPVASAVVHNLRPGAHYSFTVSCVAAVGGRLAESPPSVLSRVVAVPQAEKEDRWMLGMMAGGSGPKDKGGP 124 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig15.2525.1 >prot_P-fluviatile_contig15.2525.1 ID=prot_P-fluviatile_contig15.2525.1|Name=mRNA_P-fluviatile_contig15.2525.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=687bp MSVNQEAEPELANRSRGRGHRRSESEAGSGAFGVPRSFNSTSYDSPRWKSback to top mRNA from alignment at P-fluviatile_contig15:2048670..2053790+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig15.2525.1 ID=mRNA_P-fluviatile_contig15.2525.1|Name=mRNA_P-fluviatile_contig15.2525.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5121bp|location=Sequence derived from alignment at P-fluviatile_contig15:2048670..2053790+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig15:2048670..2053790+ >mRNA_P-fluviatile_contig15.2525.1 ID=mRNA_P-fluviatile_contig15.2525.1|Name=mRNA_P-fluviatile_contig15.2525.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4122bp|location=Sequence derived from alignment at P-fluviatile_contig15:2048670..2053790+ (Porterinema fluviatile SAG_2381)back to top |