mRNA_P-fluviatile_contig15.2514.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig15.2514.1
Unique NamemRNA_P-fluviatile_contig15.2514.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig15.2514.1 vs. uniprot
Match: D7FV51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV51_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 6.190e-80
Identity = 153/263 (58.17%), Postives = 193/263 (73.38%), Query Frame = 1 
Query:    1 MAELGDPLEHGGSA-RDVSIEMLDYDFLDKCHDPNLIRAIVCKLRSGEEGHFPELVKHAESRLMAELPAAERSKILRMRAEPRPEQFYEAVKELRDWEEQMANLMSKTKGSGGQQQHAPRWTSCAKEEGEYQNTEEASSSKDARATNDGRDRDTLAQSIGLDTKRSETKKLDAYNFRAWEQYNADEEIERLEKEEQEEELRKAEVATSTKARVEQDRLRRAKKRQEQLREAGKGRFKEILSPFERTRAAEREHAKGNESFKAR 786
            MAELGD L  G    +DV+IEMLDYDFLDKC DP LIRAI  KL+SGEEGH+P+LVKHAE+RL+ ELP AERSKILRM+AEP+P++ +EA+ +L  WEE+MA + ++ K +  ++ HAP WTS A  +     T E       R ++DG     LA+S GL  +++ TKKL+AY+FRAWE+Y+AD+EIERLEKEE EE+  K E     K  VEQDRLRRA KR++QLREAGK R++  LSPFE+ RAAERE  KGNESFK +
Sbjct:    1 MAELGDFLVGGSEKLKDVTIEMLDYDFLDKCTDPGLIRAIARKLKSGEEGHYPDLVKHAETRLLEELPQAERSKILRMKAEPQPDEIHEAISDLHGWEEEMARVPARPKENNSEEAHAPIWTSNATAQTHSTKTIEPPMLDARRGSDDGG----LARSTGLAIEQNRTKKLNAYDFRAWERYDADKEIERLEKEELEEQRHKTEARVEAKVTVEQDRLRRATKREDQLREAGKARYQGNLSPFEKKRAAERERIKGNESFKVK 259
[Close]
BLAST of mRNA_P-fluviatile_contig15.2514.1 vs. uniprot
Match: A0A6H5KKH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKH8_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 4.840e-31
Identity = 86/185 (46.49%), Postives = 100/185 (54.05%), Query Frame = 3 
Query:  783 EIKHRKQSSPWGVKEYDEAFRCYTCSLALDDTNAKVYNNRAAAAHKLERFDQAEDDCTSRAISLDPKFKKAWMRRGMVRHSRGKYADSIADFSEALLLDPNDKLAKKLRDHSASKELEVEGEGA-GQAQDKGNKKRGRILIEEVDTLPDNDGKHCGMVCIPTTTMTAAPPTLGSKKILIANGRIE 1334
            E +  K +  + V+EYDEAFRCYTCSLALDD+N +VYNNRAA AH L                                                     NDK AKKL  HSA+KE EVEGE A GQ Q K  KK GRILIEEVDTL + D +H  MVCIPTT+   APPT G++K LIA+G +E
Sbjct:  108 ERERIKGNESFKVEEYDEAFRCYTCSLALDDSNPRVYNNRAATAHHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XNDKHAKKLLKHSAAKEREVEGEAAAGQMQAK-LKKPGRILIEEVDTLKEEDEEH-SMVCIPTTSAAIAPPTPGNQKTLIAHGWME 289
[Close]
BLAST of mRNA_P-fluviatile_contig15.2514.1 vs. uniprot
Match: A0A835YMY0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY0_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.880e-23
Identity = 89/279 (31.90%), Postives = 150/279 (53.76%), Query Frame = 1 
Query:    1 MAELGDPL---EHGGSARD--VSIEMLDYDFLDKCHDPNLIRAIVCKLRSGEEGHFPELVKHAESRLMAELPAAERSKILRMRAEPRPEQFYEAVKELRDWEEQMANLMSKTK---GSGGQQQHAPRWTSCAKEEGEYQNTEEASSSKDARATNDGRDRDTLAQSIGLDTKRSETKKLDAYNFRAWEQYNADEEIERLEKEEQEEELRKAEVATSTKARVEQDRLRRA-KKRQEQLREAGKGRFKEILSPFERTRAAEREHAKGNESFKAR*NTESNHH 810
            MA++ D L    +G S++D  V++EMLDYDF+D C D  L+R I+ +L+SG +GH+  L KHAESRL+  LP  ER++++ MR  P  ++   A   L+DW + +    ++ K   G G QQ   PR+  C     +     EA +    R          +  S G   + S+  ++  Y+F+AWE+++ D     L+KEE++           +K+RVE+++ ++  + RQ ++    +G     LS  +R  ++ERE  KGNE F+A+ + ++  H
Sbjct:    1 MADIDDILASGSYGASSKDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKSGRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQDWHDNIQATDAEIKSRQGQGRQQVPPPRFVVC-----DSNGKSEAPAPAGTRGI-------AVGSSSGSTPQTSQ--RISGYDFKAWEKFDPDAAEAELDKEEEQ---------LLSKSRVEREQAQQQLEARQAEMESVLRGMDVSALSAVQRRVSSERERQKGNECFRAQESEQAYVH 256
[Close]
BLAST of mRNA_P-fluviatile_contig15.2514.1 vs. uniprot
Match: K3WSW6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSW6_GLOUD)

HSP 1 Score: 110 bits (275), Expect = 1.060e-22
Identity = 59/127 (46.46%), Postives = 80/127 (62.99%), Query Frame = 3 
Query:  765 QRIIQGEIKHRKQSSPWGVKEYDEAFRCYTCSLALDDTNAKVYNNRAAAAHKLERFDQAEDDCTSRAISLDPKFKKAWMRRGMVRHSRGKYADSIADFSEALLLDPNDKLAKKLRDHSASKELEVEG 1145
            +R +    + +K +  + V E DEA   YT S+A DD+NA +Y NRA A  +++ F  AE DC SRA+ LDP + K W RRGM R  RGKYA++IADF EAL L+P++K  KKL   +  K  E +G
Sbjct:  238 EREVHALHEKQKGNECFKVNENDEAILYYTRSMAFDDSNAIIYANRAMAYLRIKSFAAAEQDC-SRAVLLDPTYVKGWTRRGMTRFRRGKYAEAIADFEEALRLEPSNKEVKKLLKKAMDKWKETDG 363
[Close]
BLAST of mRNA_P-fluviatile_contig15.2514.1 vs. uniprot
Match: A0A7S2R421_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R421_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.370e-22
Identity = 97/281 (34.52%), Postives = 148/281 (52.67%), Query Frame = 1 
Query:    1 MAELGDPLEHGG-SARDVSIEMLDYDFLDKCHDPNLIRAIVCKLRSGEEGHFPELVKHAESRLMAELPAAERSKILRMRAEPRPEQFYEAVKELRDW------EEQMANLMSKTKGSG-----------GQQQHAPRWTSCAKEEGEYQNTEEASSSKDARATNDGRDRDTLAQSIGLDTKRSETKKLDAYN-FRAWEQYNADEEIERLEKEEQEEELRKAEVATSTKARVEQDRLRRAKKRQEQLREAGKGRFK-EILSPFERTRAAEREHAKGNESFKA 783
            MAELGD +  G  S ++V++EM+DYD+++KC DP  +RAI+ KL+SGEEG FP L +H E+RL++ LP  ER KI  +RA PRP++  EA   L +W      E++  +  +K   SG           G+Q  AP   + A+ E E                        L + I +  KR      DA   FR W++Y+ D E ++L+    + E ++   + + K   ++    RA++R+++L E  +GR + E +S  ERTR A  E  KGNE +KA
Sbjct:   15 MAELGDFITQGPKSQKEVTVEMMDYDYVNKCEDPAELRAILAKLKSGEEGFFPHLNQHVENRLLSLLPEKERKKIKTLRAGPRPDEVSEAESSLGEWMRSVRAEDEHLSRQAKENSSGNARARPLPPVRGRQTKAPVRNAAAEAELEVP----------------------LVEDIEV-PKRPAAHVYDAPEYFRKWDKYDVDAEEKKLD----DTEAKRMAASDAAKQAHDEKERGRARRREQELAEL-RGRLQWESMSQLERTRLAFGEKNKGNECYKA 267
[Close]
BLAST of mRNA_P-fluviatile_contig15.2514.1 vs. uniprot
Match: A0A1V9YB77_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB77_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.470e-22
Identity = 59/131 (45.04%), Postives = 83/131 (63.36%), Query Frame = 3 
Query:  765 QRIIQGEIKHRKQSSPWGVKEYDEAFRCYTCSLALDDTNAKVYNNRAAAAHKLERFDQAEDDCTSRAISLDPKFKKAWMRRGMVRHSRGKYADSIADFSEALLLDPNDKLAKKLRDHSASKELEVEGEGAG 1157
            +R +    +  K +  + + E DEA   Y+ SLA D TNA V+ NRA    +L+ F +AEDDC SRAI LD  + KAW RRGM R  RGKY++++ADF++AL+LDP ++  +KL   +  K LEV+G   G
Sbjct:  221 EREVYALHEKHKGNECFKLGENDEAILYYSRSLAYDPTNAIVHANRALTHLRLQNFAKAEDDC-SRAIELDSSYVKAWSRRGMTRFRRGKYSEAVADFTQALVLDPENREIEKLLKKTEEKWLEVDGTRGG 350
[Close]
BLAST of mRNA_P-fluviatile_contig15.2514.1 vs. uniprot
Match: A0A6G0XJ35_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJ35_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.160e-20
Identity = 60/157 (38.22%), Postives = 90/157 (57.32%), Query Frame = 3 
Query:  747 EGTRQGQRIIQGEIKHRKQSSPWGVKEYDEAFRCYTCSLALDDTNAKVYNNRAAAAHKLERFDQAEDDCTSRAISLDPKFKKAWMRRGMVRHSRGKYADSIADFSEALLLDPNDKLAKKLRDHSASKELEVEGEGAGQAQDKGNKKRGRILIEEVDT 1217
            E     +R +    + +K +  +   + ++A   Y+ SL  D T+A V+ NRA    K++    AE+DCT+ AI LDPK+ KAW RRGM R  RGKYA+++ADF EAL LDP+++  +KL + + SK   V+G  +  A+    K   R  I  +DT
Sbjct:  218 EAMSNAERQVCAHREKQKGNESFRAGDNEDAIIFYSRSLVFDPTSAIVHANRALVHLKVKNLSSAEEDCTA-AIELDPKYFKAWSRRGMARFRRGKYAEAVADFEEALRLDPSNREVQKLLEKTKSKWASVDGTSSAAAEQTAAKPFKRFEI--IDT 371
[Close]
BLAST of mRNA_P-fluviatile_contig15.2514.1 vs. uniprot
Match: A0A7S1Y169_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y169_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.680e-20
Identity = 54/121 (44.63%), Postives = 73/121 (60.33%), Query Frame = 1 
Query:    1 MAELGDPL-EHGGSAR--DVSIEMLDYDFLDKCHDPNLIRAIVCKLRSGEEGHFPELVKHAESRLMAELPAAERSKILRMRAEPRPEQFYEAVKELRDWEEQMANLMSKTKGSGGQQQHAP 354
            MAELGD L  +GG  R  DV++EM+DY ++D C D   +RAI+ KL++GE G FP L  H E RLMA LPA ER++ILR+R+ P P     A +EL  W+E +        G    + + P
Sbjct:   60 MAELGDDLITYGGGGREVDVTVEMMDYAYVDTCEDVATLRAILRKLKAGEGGRFPHLEAHVEERLMARLPAKERNRILRLRSRPNPSDIVAAEEELAQWQESVKTTSGAASGGARSKANLP 180
[Close]
BLAST of mRNA_P-fluviatile_contig15.2514.1 vs. uniprot
Match: A0A833RNG1_PHYIN (Tetratricopeptide repeat n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833RNG1_PHYIN)

HSP 1 Score: 102 bits (254), Expect = 5.090e-20
Identity = 56/126 (44.44%), Postives = 75/126 (59.52%), Query Frame = 3 
Query:  768 RIIQGEIKHRKQSSPWGVKEYDEAFRCYTCSLALDDTNAKVYNNRAAAAHKLERFDQAEDDCTSRAISLDPKFKKAWMRRGMVRHSRGKYADSIADFSEALLLDPNDKLAKKLRDHSASKELEVEG 1145
            R +    + +K +  +   E + A   YT S+A DDT+A +Y NRA    K + F  AEDDC +RAI LDP + K W RRGM R+ RGKYA+S+ DF EAL LDP+++   KL   +  K  EV G
Sbjct:  245 RKMYAGYEKQKGNDCFKANELEVALLHYTRSMAYDDTDAILYANRALVYLKTKNFAAAEDDC-ARAILLDPTYMKGWSRRGMTRYRRGKYAESVQDFEEALRLDPDNREVTKLMKAAKEKHGEVNG 369
[Close]
BLAST of mRNA_P-fluviatile_contig15.2514.1 vs. uniprot
Match: W2PRY6_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2PRY6_PHYPN)

HSP 1 Score: 100 bits (250), Expect = 1.440e-19
Identity = 54/126 (42.86%), Postives = 74/126 (58.73%), Query Frame = 3 
Query:  768 RIIQGEIKHRKQSSPWGVKEYDEAFRCYTCSLALDDTNAKVYNNRAAAAHKLERFDQAEDDCTSRAISLDPKFKKAWMRRGMVRHSRGKYADSIADFSEALLLDPNDKLAKKLRDHSASKELEVEG 1145
            R +    + +K +  +   E + A   YT S+A DDT+A +Y NRA    +++ F  AEDDCT RA  LDP + K W RRGM R+ RGKYA+S+ DF EAL L+P ++   KL   +  K  EV G
Sbjct:  225 RKLYAGYEKQKGNDCFKANELEMALLHYTRSMAYDDTDAILYANRALVHLRMKNFATAEDDCT-RATLLDPAYMKGWSRRGMTRYRRGKYAESVQDFEEALRLEPENREVTKLMKAAKEKHEEVNG 349
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV51_ECTSI6.190e-8058.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKH8_9PHAE4.840e-3146.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YMY0_9STRA1.880e-2331.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K3WSW6_GLOUD1.060e-2246.46Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S2R421_9STRA2.370e-2234.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1V9YB77_9STRA3.470e-2245.04Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6G0XJ35_9STRA1.160e-2038.22Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S1Y169_9STRA1.680e-2044.63Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A833RNG1_PHYIN5.090e-2044.44Tetratricopeptide repeat n=1 Tax=Phytophthora infe... [more]
W2PRY6_PHYPN1.440e-1942.86Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig15contigP-fluviatile_contig15:1989476..1993336 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score267.3
Seed ortholog evalue7.5e-69
Seed eggNOG ortholog2880.D7FV51
KEGG rclassRC00010,RC00100,RC00950,RC01025
KEGG koko:K01426,ko:K19870
KEGG ReactionR02540,R03096,R03180,R03909,R05551,R05590
KEGG Pathwayko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0008104,GO:0008150,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0019867,GO:0031072,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072655,GO:0098588,GO:0098805
EggNOG free text desc.cellular component assembly
EggNOG OGsCOG0457@1,KOG1124@2759
EC3.5.1.4
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-12_007530.1
Exons10
Model size1334
Cds size789
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815663.3850827-UTR-P-fluviatile_contig15:1989475..19895861622815663.3850827-UTR-P-fluviatile_contig15:1989475..1989586Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1989476..1989586 -
1693562798.326509-UTR-P-fluviatile_contig15:1989475..19895861693562798.326509-UTR-P-fluviatile_contig15:1989475..1989586Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1989476..1989586 -
1622815663.4012308-UTR-P-fluviatile_contig15:1989884..19899711622815663.4012308-UTR-P-fluviatile_contig15:1989884..1989971Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1989885..1989971 -
1693562798.5730455-UTR-P-fluviatile_contig15:1989884..19899711693562798.5730455-UTR-P-fluviatile_contig15:1989884..1989971Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1989885..1989971 -
1622815663.4175556-UTR-P-fluviatile_contig15:1990304..19904821622815663.4175556-UTR-P-fluviatile_contig15:1990304..1990482Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1990305..1990482 -
1693562798.8303354-UTR-P-fluviatile_contig15:1990304..19904821693562798.8303354-UTR-P-fluviatile_contig15:1990304..1990482Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1990305..1990482 -
1622815663.429813-UTR-P-fluviatile_contig15:1990587..19907271622815663.429813-UTR-P-fluviatile_contig15:1990587..1990727Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1990588..1990727 -
1693562798.8515248-UTR-P-fluviatile_contig15:1990587..19907271693562798.8515248-UTR-P-fluviatile_contig15:1990587..1990727Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1990588..1990727 -
1622815663.440881-UTR-P-fluviatile_contig15:1991018..19910471622815663.440881-UTR-P-fluviatile_contig15:1991018..1991047Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1991019..1991047 -
1693562798.862603-UTR-P-fluviatile_contig15:1991018..19910471693562798.862603-UTR-P-fluviatile_contig15:1991018..1991047Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1991019..1991047 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815663.4531415-CDS-P-fluviatile_contig15:1991047..19912271622815663.4531415-CDS-P-fluviatile_contig15:1991047..1991227Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1991048..1991227 -
1693562798.8724656-CDS-P-fluviatile_contig15:1991047..19912271693562798.8724656-CDS-P-fluviatile_contig15:1991047..1991227Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1991048..1991227 -
1622815663.4675236-CDS-P-fluviatile_contig15:1991377..19914591622815663.4675236-CDS-P-fluviatile_contig15:1991377..1991459Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1991378..1991459 -
1693562798.8818917-CDS-P-fluviatile_contig15:1991377..19914591693562798.8818917-CDS-P-fluviatile_contig15:1991377..1991459Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1991378..1991459 -
1622815663.482725-CDS-P-fluviatile_contig15:1991561..19916581622815663.482725-CDS-P-fluviatile_contig15:1991561..1991658Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1991562..1991658 -
1693562798.8994815-CDS-P-fluviatile_contig15:1991561..19916581693562798.8994815-CDS-P-fluviatile_contig15:1991561..1991658Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1991562..1991658 -
1622815663.4951928-CDS-P-fluviatile_contig15:1991857..19920231622815663.4951928-CDS-P-fluviatile_contig15:1991857..1992023Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1991858..1992023 -
1693562798.909593-CDS-P-fluviatile_contig15:1991857..19920231693562798.909593-CDS-P-fluviatile_contig15:1991857..1992023Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1991858..1992023 -
1622815663.5063927-CDS-P-fluviatile_contig15:1992854..19929501622815663.5063927-CDS-P-fluviatile_contig15:1992854..1992950Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1992855..1992950 -
1693562798.920456-CDS-P-fluviatile_contig15:1992854..19929501693562798.920456-CDS-P-fluviatile_contig15:1992854..1992950Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1992855..1992950 -
1622815663.5171454-CDS-P-fluviatile_contig15:1993168..19933361622815663.5171454-CDS-P-fluviatile_contig15:1993168..1993336Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1993169..1993336 -
1693562798.9283063-CDS-P-fluviatile_contig15:1993168..19933361693562798.9283063-CDS-P-fluviatile_contig15:1993168..1993336Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1993169..1993336 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig15.2514.1prot_P-fluviatile_contig15.2514.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig15 1991048..1993336 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig15.2514.1

>prot_P-fluviatile_contig15.2514.1 ID=prot_P-fluviatile_contig15.2514.1|Name=mRNA_P-fluviatile_contig15.2514.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=263bp
MAELGDPLEHGGSARDVSIEMLDYDFLDKCHDPNLIRAIVCKLRSGEEGH
FPELVKHAESRLMAELPAAERSKILRMRAEPRPEQFYEAVKELRDWEEQM
ANLMSKTKGSGGQQQHAPRWTSCAKEEGEYQNTEEASSSKDARATNDGRD
RDTLAQSIGLDTKRSETKKLDAYNFRAWEQYNADEEIERLEKEEQEEELR
KAEVATSTKARVEQDRLRRAKKRQEQLREAGKGRFKEILSPFERTRAAER
EHAKGNESFKAR*
back to top

mRNA from alignment at P-fluviatile_contig15:1989476..1993336-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig15.2514.1 ID=mRNA_P-fluviatile_contig15.2514.1|Name=mRNA_P-fluviatile_contig15.2514.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3861bp|location=Sequence derived from alignment at P-fluviatile_contig15:1989476..1993336- (Porterinema fluviatile SAG_2381)
ATGGCTGAGCTCGGGGATCCGCTCGAACACGGAGGGTCGGCCAGGGATGT
GTCTATTGAAATGCTTGACTATGACTTCCTTGACAAGTGTCATGACCCCA
ATCTGATCCGCGCTATCGTGTGCAAACTTCGGTCTGGGGAAGAGGGACAC
TTTCCCGAACTCGTCAAGGTGTGGCAAGAGGAGCTTGCGCAGAGGGAACT
GGTTGGTTCGAGCTTTGGTATTTTACCTCCACATGCACCGTGTAAAATGG
ACTTAGAGCGTCGCGATAGGTTCGCCCCAAAGGTCAAACTTGTTTGAGAA
TGAAGGCTACTCATGATGCTCAACAATCCCCTGAGTAGTCTGGGCTCGCA
CGCTCACGTTGTGCTCCCGGTGCTTTGCATGCGCAGCATGCTGAATCTCG
CTTGATGGCAGAGCTCCCAGCAGCAGAGCGCTCCAAGATACTACGAATGA
GGGCAGAGCCACGGCCCGAGCAATTTTATGAGGTGTGAGGTTCCTAAATG
AGCAGCTTACAGCAGTATAGCACAGAAGGCTCAAAAACATGGCACTTGAA
AACATCAACCGGAAACAAATCAATGTAGACTAGACTAAAATTGCATCAGT
CTAGAGGTTAAAATGCCTCTACAGCAGCAGGGAGGATTTCCGTGCTCCAG
GACAAAGTAGGTGTGTTGCCAACGAAGTGCAGATGGCCCCGTGACCGCCC
GGCTTTGCTTTCACGTAAACCATAAAAGCATAACAATAGACCGGAAGCGA
ATTGCAACGAGTGCGGACGGCTTCGACGCCGTTCGAGACTGCCTTTTGGT
TTAACGTTGAAATATCGAGAGGCTAACAATACTATCTAGACTTACCCCCC
TTCGTGTTAAGAGATCAGACCGGACTCAGGTTCTTTCGTTGACCTGTGTC
CGCCTGGCTGCGTGGTCAAATCCCTTGACAATGTAGCACCAACGGCAGGA
CAGGCTCGGGGGTTCGTTTCTCGTCGACAACACTTCTTTTGATCTGTGCG
TGAGAACAGACCGAAATACTAATCCGAAAAACCGTCTGTGATTAATTACT
AGCTGGAAAAAAGCAGCATCTACTTCATGGATGAAGTTGGACCTTACTAC
TTATCGACCAGGTTTCAGTGGGGAAGCGAACCTCATCGGGTGTTGGGTAA
ACCTTTTACCCGACTGGCCAAAGGATCAAGCATTCCACGAGGCGGTCAAA
GCCCCTCACACTAGCAAGTGTCTATCAAGAACTCCCCAGCGAGATTTTTG
CCAGCCGCATTGAGTCATACAGGCCGCAAAATCGTGTACCCCTTGTTCTG
AATGTCACCTCAGGCCGTCAAAGAGCTGCGTGACTGGGAGGAGCAAATGG
CCAACCTCATGTCGAAGACCAAAGGTAGTGGTGGTCAGCAGCAACACGCT
CCAAGATGGACAAGCTGCGCCAAAGAAGAGGGCGAATATCAAAACACGGA
AGAGGCGAGTTCCTCGAAGGATGCTCGAGGTCATCGTGCATGGACTTAGC
GACAACGAAATCAGCATCATCATGCCGAAGAACGCGCCCAGCAAGAATAA
ACCGCGTTTCAGTCCTGCAGATTATTCCTCCTCCATCTCTCCTTGGGGTC
GCGATGAAAGCACTTTCTGCTGCGGTTACGCAGAATCTGAAATGCACTTT
CTGCGCCAGCAGGTGCAGCTTGCAAGAGCGACGAATGACGGGCGTGATCG
CGATACCCTGGCACAATCCATTGGACTCGACACCAAGCGTAGTGAGACGA
AGAAGCTCGACGCATACAACTTCAGGTGCGTGGTCGTTGCCGGTGCAGAA
AAATTTGCTGACGATGGCTTGTGAACGTATGATCAAGCTCAAAGGTCGTC
CGCGATCGTTCCGCATGGATACTGCAGGGCATGGGAGCAGTACAACGCGG
ACGAAGAGATCGAAAGGTTGGAAAAGGAAGAGCAGGAAGAGGAGCTGCGA
AAAGCCGAGGTGTGGCCCAAAGAAATGCATTGTGAGAGTTGGGCTGTCAG
TGCTTTCCGCGGCTTCGTTAAAAAGTAGCGTCTCACAAATTGCGATGAGT
GTTGCCGGCGGCAGAAACACGCGCGGATGAAAATGAAAGTGTCTGAAACA
CCGCGACAGGTTGCCACGTCAACTAAAGCCAGAGTCGAACAAGACCGACT
CAGGCGCGCCAAAAAGAGACAGGAACAACTTCGGGAGGCGGGCAAGGGTC
GATTTAAGGAAATCCTGTCTCCATTTGAAAGGACACGTGCTGCGGAGAGG
GAACACGCCAAGGGCAACGAATCATTCAAGGCGAGATAAAACACAGAAAG
CAATCATCACCTTGGGGTGTGAATTCATCTTGTCCGGTTGCTGGTTTCCT
GTCCGTTCGATTCATATGCAAGCAGGCCATTTCTGAATCAAGCTCGCAAC
GGCATTTCACAATTCGCCTCCACACGAGAAACTGCTTTGCCACGAGACAA
TTTTTTGCTCGTCGAAGGGTTCCCTCAACTCAATTAACGAATGCGGCAAT
GTCGCTGGTATCATCTCTTGAAATCTGCATTCGACTTTCCTAAAGTGTGA
CGCCTTTCATGGTGTTTTTGGGAATAATCGTCATCAAAGCGCTATTTATC
GCGTCTCAGGTGAAAGAGTATGACGAGGCGTTCCGATGCTACACTTGCTC
CCTGGCCTTGGATGACACAAACGCCAAGGTGTACAACAACAGGGCTGCCG
CCGCGCACAAATTAGAAAGATTCGACCAAGCAGAGGACGATTGTACGAGG
TGAGGTGCTTTGCCGTGCATTCTCCGTGTTCTTCGCCTGCAACGTCTTCG
CAACGCCTGCTGATACGGGATCACGGACACGCGATCACCGACCGCACTGT
CAAGCAGGGCTATTTCTCTTGACCCAAAGTTCAAGAAAGCCTGGATGCGG
CGAGGTATGGTGCGCCACAGCCGTGGGAAGTATGCCGACTCAATTGCTGA
CTTCAGCGAAGCGCTACTTCTGGATCCAAACGATAAACTTGCGAAGAAGC
TCAGGGACCACAGCGCATCCAAAGAACTCGAGGTCAGCTGGAAGACCCTA
CATTTTCAAGCCGGCCTTGTTGGCCAGTGATGTAGAAGTACATGAACCGA
CGATTGTTTGGCGCTCAGACATGCACAAAGGTTGTCCTATGAACCCGCGT
GATCGCTCGGTAGCTCGTGTTAATGGTGTGTTGAACCAATCGAAATTTCC
ATTCGAACGAAGCTGTCGGCCAGGGCGCAGATTCCACGTGATGTGAAAGT
TGCATCGGACTTGGCATCGCTTACGGTTAGGCGGAATTTCCCCTTCAAAA
TGTTTGCAGTTCAAAACTAAGTATTGGACACAACGAATACTGCTTCTCTA
CGACTACCGTCGCAGGTAGAAGGCGAAGGTGCTGGACAGGCACAGGACAA
AGGCAACAAAAAGCGAGGACGAATTCTCATCGAGGAAGTGGACACGCTGC
CGGTGAGCCTCAATTCTCCCCATGCGACATCCTGGCGTGGATGATGGCTT
GCTTTCCACCTCTCCGAGGGTGAAACGATGCACCCAAAGTAAGGTTCTCA
AGCAGTATCAGGGGAAACCAGCGGGCCAAATCGTCTCATGTTCGATCTTG
AGCATCTCTCTCGCTTCTTGAAGGAAACTGATAGCAACAACTCTGAAATG
GTGTGCATTCATCAGCAATTTCTACGATTGCTGATCCTCCTATTTCGAGA
ACACCGTGAGACACTTGCCTCGTGCCTGCTTTCCGCGCTTGTGGCTGAAG
GACAATGATGGCAAGCACTGTGGAATGGTGTGTATTCCAACCACCACCAT
GACTGCGGCCCCTCCTACTCTCGGGAGCAAGAAAATACTGATCGCGAACG
GACGGATTGAA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig15:1989476..1993336-

>mRNA_P-fluviatile_contig15.2514.1 ID=mRNA_P-fluviatile_contig15.2514.1|Name=mRNA_P-fluviatile_contig15.2514.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1578bp|location=Sequence derived from alignment at P-fluviatile_contig15:1989476..1993336- (Porterinema fluviatile SAG_2381)
ATGGCTGAGCTCGGGGATCCGCTCGAACACGGAGGGTCGGCCAGGGATGT
GTCTATTGAAATGCTTGACTATGACTTCCTTGACAAGTGTCATGACCCCA
ATCTGATCCGCGCTATCGTGTGCAAACTTCGGTCTGGGGAAGAGGGACAC
TTTCCCGAACTCGTCAAGATGGCTGAGCTCGGGGATCCGCTCGAACACGG
AGGGTCGGCCAGGGATGTGTCTATTGAAATGCTTGACTATGACTTCCTTG
ACAAGTGTCATGACCCCAATCTGATCCGCGCTATCGTGTGCAAACTTCGG
TCTGGGGAAGAGGGACACTTTCCCGAACTCGTCAAGCATGCTGAATCTCG
CTTGATGGCAGAGCTCCCAGCAGCAGAGCGCTCCAAGATACTACGAATGA
GGGCAGAGCCACGGCCCGAGCAATTTTATGAGCATGCTGAATCTCGCTTG
ATGGCAGAGCTCCCAGCAGCAGAGCGCTCCAAGATACTACGAATGAGGGC
AGAGCCACGGCCCGAGCAATTTTATGAGGCCGTCAAAGAGCTGCGTGACT
GGGAGGAGCAAATGGCCAACCTCATGTCGAAGACCAAAGGTAGTGGTGGT
CAGCAGCAACACGCTCCAAGATGGACAAGCTGCGCCAAAGAAGAGGGCGA
ATATCAAAACACGGAAGAGGCGAGTTCCTCGAAGGATGCTCGAGGCCGTC
AAAGAGCTGCGTGACTGGGAGGAGCAAATGGCCAACCTCATGTCGAAGAC
CAAAGGTAGTGGTGGTCAGCAGCAACACGCTCCAAGATGGACAAGCTGCG
CCAAAGAAGAGGGCGAATATCAAAACACGGAAGAGGCGAGTTCCTCGAAG
GATGCTCGAGCGACGAATGACGGGCGTGATCGCGATACCCTGGCACAATC
CATTGGACTCGACACCAAGCGTAGTGAGACGAAGAAGCTCGACGCATACA
ACTTCAGCGACGAATGACGGGCGTGATCGCGATACCCTGGCACAATCCAT
TGGACTCGACACCAAGCGTAGTGAGACGAAGAAGCTCGACGCATACAACT
TCAGGGCATGGGAGCAGTACAACGCGGACGAAGAGATCGAAAGGTTGGAA
AAGGAAGAGCAGGAAGAGGAGCTGCGAAAAGCCGAGGGCATGGGAGCAGT
ACAACGCGGACGAAGAGATCGAAAGGTTGGAAAAGGAAGAGCAGGAAGAG
GAGCTGCGAAAAGCCGAGGTTGCCACGTCAACTAAAGCCAGAGTCGAACA
AGACCGACTCAGGCGCGCCAAAAAGAGACAGGAACAACTTCGGGAGGCGG
GCAAGGGTCGATTTAAGGAAATCCTGTCTCCATTTGAAAGGACACGTGCT
GCGGAGAGGGAACACGCCAAGGGCAACGAATCATTCAAGGCGAGATAAGT
TGCCACGTCAACTAAAGCCAGAGTCGAACAAGACCGACTCAGGCGCGCCA
AAAAGAGACAGGAACAACTTCGGGAGGCGGGCAAGGGTCGATTTAAGGAA
ATCCTGTCTCCATTTGAAAGGACACGTGCTGCGGAGAGGGAACACGCCAA
GGGCAACGAATCATTCAAGGCGAGATAA
back to top