mRNA_P-fluviatile_contig15.2494.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig15.2494.1 vs. uniprot
Match: A0A6H5JHH0_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH0_9PHAE) HSP 1 Score: 125 bits (315), Expect = 5.890e-31 Identity = 70/103 (67.96%), Postives = 87/103 (84.47%), Query Frame = 2
Query: 722 SLLRQAAKAAAKG-PVK-KKRAKKDKDAPKGAMSAFMQFSQQERPKLQSENPEMKITEISKVLGSRWREMDEEAKAPYQKKTDADKIRYQKEMEAYNAKKAAE 1024
++ +++AKAA+ G PVK KK+AKKD + PKGA SAFMQFSQ+ER ++ ENP+MK+TEISK+LG+RWREMD+ KAP+QKK D DK RYQKEM AYNAKKAAE
Sbjct: 5 AVSKKSAKAASNGGPVKRKKKAKKDPNKPKGASSAFMQFSQKERAVVKEENPDMKVTEISKLLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAAE 107
BLAST of mRNA_P-fluviatile_contig15.2494.1 vs. uniprot
Match: D7FLE3_ECTSI (ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP) transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLE3_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 1.670e-21 Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 2
Query: 824 MQFSQQERPKLQSENPEMKITEISKVLGSRWREMDEEAKAPYQKKTDADKIRYQKEMEAYNAKKAAE 1024
MQFSQ+ER ++ ENP+MK+TEISKVLG+RWREMD+ KAP+QKK D DK RYQKEM AYNAKKAAE
Sbjct: 1 MQFSQKERAVVKQENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAAE 67
BLAST of mRNA_P-fluviatile_contig15.2494.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI) HSP 1 Score: 105 bits (263), Expect = 1.620e-20 Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = 2
Query: 779 AKKDKDAPKGAMSAFMQFSQQERPKLQSENPEMKITEISKVLGSRWREMDEEAKAPYQKKTDADKIRYQKEMEAYNAKKAA 1021
AKKDKDAPKGAMSAFMQFSQ R +++++NPE+K+TEISKVLG +W ++DE K PYQ K D DK RY++E +AY++KKAA
Sbjct: 546 AKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRERDAYDSKKAA 626
BLAST of mRNA_P-fluviatile_contig15.2494.1 vs. uniprot
Match: A0A166GYV5_9AGAM (HMG box domain-containing protein n=1 Tax=Peniophora sp. CONT TaxID=1314672 RepID=A0A166GYV5_9AGAM) HSP 1 Score: 85.5 bits (210), Expect = 4.210e-16 Identity = 52/116 (44.83%), Postives = 72/116 (62.07%), Query Frame = 2
Query: 689 VCTFP-PHYPMCSLLRQAAKAAAKGPV-KKKRAKKDKDAPKGAMSAFMQFSQQERPKLQSENPEMKITEISKVLGSRWREMDEEAKAPYQKKTDADKIRYQKEMEAYNAKKAAEAS 1030
+ T P P P + + KAA K KK RAKKDK+APK +SA+M FSQ R +++ ++P+ E+ K+LG +W+EMDE+ K PY K+ DK RY++E E Y A KAA S
Sbjct: 23 LTTLPAPQMPKEATQTKTRKAATKKDNGKKPRAKKDKNAPKRGLSAYMFFSQDHREQVKKDHPDASFGELGKILGGKWKEMDEDDKKPYAKQAAEDKARYEREKEEYEAGKAASGS 138
BLAST of mRNA_P-fluviatile_contig15.2494.1 vs. uniprot
Match: NHP6_NEUCR (Non-histone chromosomal protein 6 n=6 Tax=Sordariaceae TaxID=5148 RepID=NHP6_NEUCR) HSP 1 Score: 83.6 bits (205), Expect = 6.330e-16 Identity = 43/102 (42.16%), Postives = 69/102 (67.65%), Query Frame = 2
Query: 725 LLRQAAKAAAKGPVKKKRAKKDKDAPKGAMSAFMQFSQQERPKLQSENPEMKITEISKVLGSRWREMDEEAKAPYQKKTDADKIRYQKEMEAYNAKKAAEAS 1030
+ + AAK+ G V+K+RAKKD +APK +SA+M F+ ++R ++ ENP + ++ K+LG RW+ + ++ +APY+ K ADK RY+ E +AYNA+ E S
Sbjct: 1 MPKAAAKSKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYEAKAAADKKRYEDEKQAYNAEADEEES 102
BLAST of mRNA_P-fluviatile_contig15.2494.1 vs. uniprot
Match: A0A5E3X9L3_9AGAM (HMG box domain-containing protein n=1 Tax=Peniophora sp. CBMAI 1063 TaxID=718367 RepID=A0A5E3X9L3_9AGAM) HSP 1 Score: 83.2 bits (204), Expect = 1.240e-15 Identity = 45/95 (47.37%), Postives = 64/95 (67.37%), Query Frame = 2
Query: 746 AAAKGPVKKKRAKKDKDAPKGAMSAFMQFSQQERPKLQSENPEMKITEISKVLGSRWREMDEEAKAPYQKKTDADKIRYQKEMEAYNAKKAAEAS 1030
AA K KK RAKKDK+APK +SA+M FSQ R +++ ++P+ E+ K+LG +W+EMD++ K PY K+ DK RY++E E Y + KAA S
Sbjct: 14 AAKKTDGKKTRAKKDKNAPKRGLSAYMFFSQDHREQVKKDHPDASFGELGKILGGKWKEMDDDDKKPYIKQAAEDKARYEREKEEYESGKAASGS 108
BLAST of mRNA_P-fluviatile_contig15.2494.1 vs. uniprot
Match: D8Q5A9_SCHCM (HMG box domain-containing protein n=2 Tax=Schizophyllaceae TaxID=5332 RepID=D8Q5A9_SCHCM) HSP 1 Score: 82.8 bits (203), Expect = 1.600e-15 Identity = 46/96 (47.92%), Postives = 66/96 (68.75%), Query Frame = 2
Query: 743 KAAAKGPVKKKRAKKDKDAPKGAMSAFMQFSQQERPKLQSENPEMKITEISKVLGSRWREMDEEAKAPYQKKTDADKIRYQKEMEAYNAKKAAEAS 1030
KAA K ++AKKD +APK A+SA+M FSQ R ++++ENP+ E+ K+LG++W+EMDE+ K PY K DK R + + AY+ KK+AEAS
Sbjct: 12 KAATKSEKTPRKAKKDPNAPKRALSAYMFFSQDWRERVKAENPDASFGELGKILGAKWKEMDEDEKKPYVAKAAKDKERAEADKAAYDEKKSAEAS 107
BLAST of mRNA_P-fluviatile_contig15.2494.1 vs. uniprot
Match: T0K8J1_COLGC (HMG box domain-containing protein n=5 Tax=Colletotrichum gloeosporioides species complex TaxID=2707338 RepID=T0K8J1_COLGC) HSP 1 Score: 82.4 bits (202), Expect = 1.620e-15 Identity = 41/95 (43.16%), Postives = 65/95 (68.42%), Query Frame = 2
Query: 725 LLRQAAKAAAKGPVKKKRAKKDKDAPKGAMSAFMQFSQQERPKLQSENPEMKITEISKVLGSRWREMDEEAKAPYQKKTDADKIRYQKEMEAYNA 1009
+ + A K A G V+KKR KKD +APK +SA+M F+ ++R ++ ENP + ++ K+LG RW+ ++++ +APY+ K ADK RY+ E +AYNA
Sbjct: 1 MPKAATKRGAAGKVEKKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNDKQRAPYEAKAAADKKRYEDEKQAYNA 95
BLAST of mRNA_P-fluviatile_contig15.2494.1 vs. uniprot
Match: R1G0Y6_EMIHU (HMG box domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1G0Y6_EMIHU) HSP 1 Score: 80.5 bits (197), Expect = 4.590e-15 Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = 2
Query: 755 KGPVKKKRAKKDKDAPKGAMSAFMQFSQQERPKLQSENPEMKITEISKVLGSRWREMDEEAKAPYQKKTDADKIRYQKEMEAYNA 1009
K P KKK KDKDAPK MSA+M + RP+L+ E+P+ K+T+I ++ G++W+EMD EAKAP+ + ADK RY+ EM+A A
Sbjct: 3 KRPQKKK---KDKDAPKRGMSAYMLWMNANRPRLKEEHPDAKVTDIGRIAGAKWKEMDAEAKAPWDARAKADKQRYEAEMKALEA 84
BLAST of mRNA_P-fluviatile_contig15.2494.1 vs. uniprot
Match: I1BUW9_RHIO9 (HMG box domain-containing protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BUW9_RHIO9) HSP 1 Score: 80.9 bits (198), Expect = 5.070e-15 Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 2
Query: 734 QAAKAAAKGPVKKKRAKKDKDAPKGAMSAFMQFSQQERPKLQSENPEMKITEISKVLGSRWREMDEEAKAPYQKKTDADKIRYQKE 991
+ +K A KKKR KKD +APK A+SA+M FSQ R K+ ENPE K EI K+LG++W+EM EE K P+ +K +ADK RY+ E
Sbjct: 8 KVSKRATASDDKKKRGKKDPNAPKRALSAYMFFSQANREKVIKENPEAKFGEIGKILGAKWKEMTEEEKKPFVEKAEADKKRYEDE 93 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig15.2494.1 >prot_P-fluviatile_contig15.2494.1 ID=prot_P-fluviatile_contig15.2494.1|Name=mRNA_P-fluviatile_contig15.2494.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=119bp MCSLLRQAAKAAAKGPVKKKRAKKDKDAPKGAMSAFMQFSQQERPKLQSEback to top mRNA from alignment at P-fluviatile_contig15:1814252..1817611- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig15.2494.1 ID=mRNA_P-fluviatile_contig15.2494.1|Name=mRNA_P-fluviatile_contig15.2494.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3360bp|location=Sequence derived from alignment at P-fluviatile_contig15:1814252..1817611- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig15:1814252..1817611- >mRNA_P-fluviatile_contig15.2494.1 ID=mRNA_P-fluviatile_contig15.2494.1|Name=mRNA_P-fluviatile_contig15.2494.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=714bp|location=Sequence derived from alignment at P-fluviatile_contig15:1814252..1817611- (Porterinema fluviatile SAG_2381)back to top |