mRNA_P-fluviatile_contig15.2475.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig15.2475.1 vs. uniprot
Match: D7FLC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC4_ECTSI) HSP 1 Score: 1038 bits (2685), Expect = 0.000e+0 Identity = 572/828 (69.08%), Postives = 612/828 (73.91%), Query Frame = 3
Query: 288 VMRTASGPPLDAAQRAALGXXXXXXXXIVKGEFPRVLG---EESLRKRPREAWSGMNESTRPGLTVNVGTVXXXXXXXXXXXXXXXXXXLPTPGGKKDRVPNHWWELELTAEGPMLYPTSNCHEWTSDNGIEHRIMEIEFQHGCEVKPPKDRLIKDFTLNWRPNSDIVYVFETEQSGFFGPILGMFEKQTITYNKMFLYRQMQAQPWPVRG-RGWNGVGGAAETTQMRSAWLFNDPRTSQWTIALDYKAQPSTPIYQYTLPSEYSRQGTPCMDPNTFNANSIKVKGCTTLIPPIEVLLLSENSVRDVCSAVWMGCFTANPQEVAFDLLCRLMSMTESLHLPEDSDRYAAEVFDAQRADILAFFLVGICDDPQDRVVRREHYLAFMEWFVYTLPQVALPVKIWRMYRALNDDNIPFVSFPLSQDKSAFYSHRQAMSGPAVPGRFSFRFSRQPSYVTVDYTVQGRAIEGRPQATVMSYRIKISAIDVRGVMLRIENLLLRRDGQVTQDRMLGESSLVQGL---GAXXXXXXXXXXXXXXPSANVGAPSSGDHNEPGLGPLGSLERIIAQVDMEESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGASGSD------------GWTDMFQGMTVELAQEQASQLQHGHHRGSGXXXRPDDRQRTGEHAAAAASGYQDRSNYGHRVCGWLGPRGEGNGRKVGVG--------RRGGA----RQRXXXXXXXXXXXXXXXXGGRMSVQSGDTLTFFDDPPQGNHAPHHLT--GSDGHGGPMNLEYVEFPNFHELLVFFGRTLTERYDTSREEQETIPSPMYMHNMDE 2672
+MR SGPPLDAAQRAALG +VKGE R G EESLRKRPRE+WSG+ + PGLTV G L TPGGKKDRVPNHWWELELTAEGPMLYPTSNCHEWTSDNGIEHRIMEIEFQHGCEVKPPKDRLIKDFTLNWRPNSDIVYVFETEQSGFFG +LGMFEKQT+T+NKMFLYRQMQAQPWPVRG RGWNG GG AETTQMRSAWLFNDP T QWTIALDY++QPS+PIYQY LP EY+RQGTPCMDP+TFN NS+KVKGCTTLIPPIEVLLLSENSVR+VC AVW+GCFTANP EVAFDLLCRLMSMTESLHL ++SDRYAAEVFD+QRA+IL+FFLVGI +DP DRVVRREHYLAFMEWFVYTLPQVALPVKIWRMYRAL DDNIPFVSFPLSQDKSAFYSHRQAMSGPA+PGRFSFRFSRQPS +TVDYTVQ RA+EGRPQATVMSYRIKISAIDVRGVMLRIENLLLR D QV Q R+L E+SLVQG G XXXXXXXXXXXXXX +G +E GLGPLGSLER+IAQVDMEESG G++GS GWTDMFQGMTVELAQEQA+QL H XXX +G G++VG G RRGGA +Q GRMSVQ+GDTL+FFDDPPQGN H L G+ GHGG MNLEYVEFPNFHELLVFFGRTLTERYDTSREEQETIPSPMYMHNMDE
Sbjct: 1 MMRAGSGPPLDAAQRAALGGG------VVKGEISRAAGAGQEESLRKRPRESWSGLGDPAGPGLTVKTGGRGSGRAGGQSQGPASPAGGLSTPGGKKDRVPNHWWELELTAEGPMLYPTSNCHEWTSDNGIEHRIMEIEFQHGCEVKPPKDRLIKDFTLNWRPNSDIVYVFETEQSGFFGLVLGMFEKQTVTHNKMFLYRQMQAQPWPVRGDRGWNGGGGPAETTQMRSAWLFNDPCTGQWTIALDYQSQPSSPIYQYNLPPEYTRQGTPCMDPSTFNGNSVKVKGCTTLIPPIEVLLLSENSVREVCGAVWVGCFTANPPEVAFDLLCRLMSMTESLHLTDESDRYAAEVFDSQRAEILSFFLVGIYEDPADRVVRREHYLAFMEWFVYTLPQVALPVKIWRMYRALRDDNIPFVSFPLSQDKSAFYSHRQAMSGPAIPGRFSFRFSRQPSCITVDYTVQARAVEGRPQATVMSYRIKISAIDVRGVMLRIENLLLRGDEQVAQGRVLEETSLVQGPVENGXXXXXXXXXXXXXXXXXXXXXXSQNGAQHEAGLGPLGSLERVIAQVDMEESGDSGAGVSRQEHARPPVHGGYPNSRG---------GSTGSXXXXXXXXXXXXXGWTDMFQGMTVELAQEQAAQL----HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQGGRQGQRVGDGGMPGGKGDRRGGAPQFSQQHGGPGPSTSSSYMCGPAVGRMSVQTGDTLSFFDDPPQGNQVQHQLPVGGAAGHGGAMNLEYVEFPNFHELLVFFGRTLTERYDTSREEQETIPSPMYMHNMDE 809
BLAST of mRNA_P-fluviatile_contig15.2475.1 vs. uniprot
Match: A0A6H5J9Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z1_9PHAE) HSP 1 Score: 863 bits (2231), Expect = 1.670e-288 Identity = 488/758 (64.38%), Postives = 532/758 (70.18%), Query Frame = 3
Query: 12 GAGGSFPLPGLHQPAS-SSGPSRLFADGKESDG--------------GGSPGFAGG----YHDN-VSGMMSGLLPTSGGGDGGGRNPSTVAMGFGG--QMMDHRRGGYRPDQAGVMRTASGPPLDAAQRAALGXXXXXXXXIVKGEFPRVLGEES----LRKRPREAWSGMNESTRPGLTVNVGTVXXXXXXXXXXXXXXXXXXLPTPGGKKDRVPNHWWELELTAEGPMLYPTSNCHEWTSDNGIEHRIMEIEFQHGCEVKPPKDRLIKDFTLNWRPNSDIVYVFETEQSGFFGPILGMFEKQTITYNKMFLYRQMQAQPWPVRG-RGWNGVGGAAETTQMRSAWLFNDPRTSQWTIALDYKAQPSTPIYQYTLPSEYSRQGTPCMDPNTFNANSIKVKGCTTLIPPIEVLLLSENSVRDVCSAVWMGCFTANPQEVAFDLLCRLMSMTESLHLPEDSDRYAAEVFDAQRADILAFFLVGICDDPQDRVVRREHYLAFMEWFVYTLPQVALPVKIWRMYRALNDDNIPFVSFPLSQDKSAFYSHRQAMSGPAVPGRFSFRFSRQPSYVTVDYTVQGRAIEGRPQATVMSYRIKISAIDVRGVMLRIENLLLRRDGQVTQDRMLGESSLVQGL---GAXXXXXXXXXXXXXXPSANVGAPSSGDHNEPGLGPLGSLERIIAQVDMEESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGASGSD----------------GWTDMFQGMTVEL 2147
G GG F +PGL Q A+ +SG S+LF+DG G G SPG GG Y + + + GL P+ G G G S+ +M FGG RPD + P AA R+ G G R + EE+ + G+ + PGLTV G L TPGGKKDRVPNHWWELELTAEGPMLYPTSNCHEWTSDNGIEHRIMEIEFQHGCEVKPPKDRLIKDFTLNWRPNSDIVYVFETEQSGFFG +LGMFEKQT+T+NKMFLYRQMQAQPWPVRG RGWNG GG AET QMRSAWLFNDP T QWTIALDY++QPS+PIYQY LP EY RQGTPCMDPNTFN NS+KVKGCTTLIPPIEVLLLSENSVR+VC AVW+GCFTANP EVAFDLLCRLMSMTESLHL ++SDRYAAEVFD+QR +IL+FFLVGIC+DP DRVVRREHYLAFMEWFVYTLPQVALPVKIWRMYRAL DDNIPFVSFPLSQDKSAFYSHRQAMSGPA+PGRFSFRFSRQPS +TVDYTVQ RA+EGRPQATVMSYRIKISAIDVRGVMLRIENLLLR D QV Q R+L E+SLVQG G XXXXXXXXXXXX +G +EPGLGPLGSLER+IAQVDMEESG G++GS GWTDMFQGMTVE+
Sbjct: 227 GGGGHFGMPGLQQQAAPASGSSQLFSDGSSGGGAIDPNGMAVGGARGGVSPGLVGGGGAPYDAHGIDDGIPGLSPSPGSGRG-----SSASMTFGGGXXXXXXXXXXXRPDGVDEGGVGATPGRRAAGRSRRGRGEGGDVEG-GGRGARGVVEEAAEGIMEVTMMSVLCGLGDPAGPGLTVKTGGRGSGRAGGQSQGPASPAGGLSTPGGKKDRVPNHWWELELTAEGPMLYPTSNCHEWTSDNGIEHRIMEIEFQHGCEVKPPKDRLIKDFTLNWRPNSDIVYVFETEQSGFFGLVLGMFEKQTVTHNKMFLYRQMQAQPWPVRGDRGWNGGGGPAETMQMRSAWLFNDPCTGQWTIALDYQSQPSSPIYQYNLPPEYIRQGTPCMDPNTFNTNSVKVKGCTTLIPPIEVLLLSENSVREVCGAVWVGCFTANPPEVAFDLLCRLMSMTESLHLTDESDRYAAEVFDSQRGEILSFFLVGICEDPADRVVRREHYLAFMEWFVYTLPQVALPVKIWRMYRALRDDNIPFVSFPLSQDKSAFYSHRQAMSGPAIPGRFSFRFSRQPSCITVDYTVQARAVEGRPQATVMSYRIKISAIDVRGVMLRIENLLLRGDEQVAQGRVLEETSLVQGPVENGGGGXXXXXXXXXXXXXXXXXSGSQNGAQHEPGLGPLGSLERVIAQVDMEESGDSGACVSRQEHARPPVDGGYPNSRG---------GSAGSXXXXXXXXXXXXXXAGGGWTDMFQGMTVEV 969 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig15.2475.1 >prot_P-fluviatile_contig15.2475.1 ID=prot_P-fluviatile_contig15.2475.1|Name=mRNA_P-fluviatile_contig15.2475.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=840bp MMSGLLPTSGGGDGGGRNPSTVAMGFGGQMMDHRRGGYRPDQAGVMRTASback to top mRNA from alignment at P-fluviatile_contig15:1650386..1665835+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig15.2475.1 ID=mRNA_P-fluviatile_contig15.2475.1|Name=mRNA_P-fluviatile_contig15.2475.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=15450bp|location=Sequence derived from alignment at P-fluviatile_contig15:1650386..1665835+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig15:1650386..1665835+ >mRNA_P-fluviatile_contig15.2475.1 ID=mRNA_P-fluviatile_contig15.2475.1|Name=mRNA_P-fluviatile_contig15.2475.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5040bp|location=Sequence derived from alignment at P-fluviatile_contig15:1650386..1665835+ (Porterinema fluviatile SAG_2381)back to top |