mRNA_P-fluviatile_contig15.2434.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig15.2434.1
Unique NamemRNA_P-fluviatile_contig15.2434.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig15.2434.1 vs. uniprot
Match: D7FJ97_ECTSI (Thylakoid lumenal protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ97_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 6.030e-75
Identity = 181/201 (90.05%), Postives = 189/201 (94.03%), Query Frame = 1 
Query:    1 MSLEGTNNAARVAVGTFLAGAAVLFSGENMALADGSTAKFSLPPVSQAKDRCVFKSSAMGQANAARDKLYDLRECDMSGKTAAGFDLSGVIASEANFSKGDFREVVMSKAYARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVTGAETRESAGCRGV 603
            MSL+  NN+ARVA+GTFLAGAAVLFSG   ALADGST KFSLPPV Q KDRC+FKSSAMGQANAARDKLYDLRECDMSGK+AAGFDLSGVIASEANFSKGDF+EVVMSKAYAR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVT A+TR SAGCR +
Sbjct:    1 MSLD--NNSARVALGTFLAGAAVLFSGGEAALADGSTTKFSLPPVGQGKDRCLFKSSAMGQANAARDKLYDLRECDMSGKSAAGFDLSGVIASEANFSKGDFKEVVMSKAYARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVTNADTRASAGCRSL 199
[Close]
BLAST of mRNA_P-fluviatile_contig15.2434.1 vs. uniprot
Match: A0A836CB03_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB03_9STRA)

HSP 1 Score: 177 bits (448), Expect = 3.510e-49
Identity = 148/200 (74.00%), Postives = 165/200 (82.50%), Query Frame = 1 
Query:    1 MSLEGTNNAARVAVGTFLAGAAVLFSGENMALADGSTAKFSLPPVSQA-KDRCVFKSSAMGQANAARDKLYDLRECDMSGKTAAGFDLSGVIASEANFSKGDFREVVMSKAYARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVTGAETRESAGCR 597
            M  EG  +     V   LAG ++L  G  +ALADGST KF+LPP++ + KDRC FKSS+MGQANAAR+KL+DLR CDMSGK+AA  DLSGVIASEANFSK DF+E  +SKAYAR+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  TEA MGDFD K+LCKNPTLKG NPVTGA T+ESAGCR
Sbjct:   34 MKAEGGASPFSRTVAAVLAGISLL-GGAELALADGSTGKFALPPINYSEKDRCTFKSSSMGQANAAREKLFDLRMCDMSGKSAALSDLSGVIASEANFSKVDFKEAQLSKAYARNSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTEAAMGDFDLKSLCKNPTLKGENPVTGAPTKESAGCR 232
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BLAST of mRNA_P-fluviatile_contig15.2434.1 vs. uniprot
Match: A0A4D9D0Q4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0Q4_9STRA)

HSP 1 Score: 157 bits (396), Expect = 2.190e-41
Identity = 135/189 (71.43%), Postives = 153/189 (80.95%), Query Frame = 1 
Query:   34 VAVGTFLAGAAVLFSGENMALADGSTAKFSLPPV-SQAKDRCVFKSSAMGQANAARDKLYDLRECDMSGKTAAGFDLSGVIASEANFSKGDFREVVMSKAYARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVTGAETRESAGCR 597
            VAV + L  AAV FS    A+ADG+T++F LPPV ++ K RC FKSS MGQANAARDKLYDLR CDMSGK A GFDLSG I +E  F K +F+E V+SKAYA++  XXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT+ YMG+F+ + LCKNPTLKGTNPVT A T+ESAGCR
Sbjct:   59 VAVLSVLFPAAVTFS-PPPAIADGATSRFVLPPVDTKDKGRCQFKSSNMGQANAARDKLYDLRLCDMSGKDATGFDLSGAIMAEGTFKKVNFKEAVLSKAYAKAADXXXXXXXXXXXXRVSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTYMGEFNLRELCKNPTLKGTNPVTQAPTKESAGCR 246
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BLAST of mRNA_P-fluviatile_contig15.2434.1 vs. uniprot
Match: L1ICC6_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1ICC6_GUITC)

HSP 1 Score: 145 bits (367), Expect = 2.770e-37
Identity = 113/188 (60.11%), Postives = 137/188 (72.87%), Query Frame = 1 
Query:   40 VGTFLAGAAVLFSGE-NMALADGSTAKFSLPPVSQ-AKDRCVFKSSAMGQANAARDKLYDLRECDMSGKTAAGFDLSGVIASEANFSKGDFREVVMSKAYARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVTGAETRESAGCR 597
            V +F+AGA +L S    + +   S+ KF+ PP+ + AKDRC F+SSA+GQANAARDKLYDLREC M+GK A GFDL+G +  + +FSK  F++ VMSK +A        XXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXX      ++ YMGDFD K +CKNPTL+GTNPVTG +TR SA CR
Sbjct:   49 VASFVAGALILGSSVLPLDVQADSSLKFNFPPIDRKAKDRCTFRSSAIGQANAARDKLYDLRECPMAGKDATGFDLAGALMQKGDFSKVKFKDAVMSKVFADEATFDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEFXXXXLTDSDFSDTYMGDFDNKKICKNPTLQGTNPVTGVDTRASASCR 236
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BLAST of mRNA_P-fluviatile_contig15.2434.1 vs. uniprot
Match: A0A7S0EIA2_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EIA2_9CRYP)

HSP 1 Score: 145 bits (366), Expect = 3.860e-37
Identity = 111/165 (67.27%), Postives = 129/165 (78.18%), Query Frame = 1 
Query:  106 STAKFSLPPVSQA-KDRCVFKSSAMGQANAARDKLYDLRECDMSGKTAAGFDLSGVIASEANFSKGDFREVVMSKAYARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVTGAETRESAGCR 597
            S+ KF+ PP+ +  KDRC F+SSA+GQANAARDKLYDLREC MSGK A GFDL+G +  + +FSK  F++ VMSK +A        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      ++ YMGDFD K +CKNPTL+GTNPVTGA+TR SA CR
Sbjct:   72 SSLKFNFPPIDRKDKDRCTFRSSAIGQANAARDKLYDLRECSMSGKDATGFDLAGALMQKGDFSKVKFKDAVMSKVFANEATFDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTDADFSDTYMGDFDNKKICKNPTLQGTNPVTGADTRASASCR 236
[Close]
BLAST of mRNA_P-fluviatile_contig15.2434.1 vs. uniprot
Match: A0A7S0LGG3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LGG3_9EUKA)

HSP 1 Score: 143 bits (361), Expect = 1.280e-36
Identity = 121/175 (69.14%), Postives = 135/175 (77.14%), Query Frame = 1 
Query:   73 FSGENMALADGSTAKFSLPPVSQAK-DRCVFKSSAMGQANAARDKLYDLRECDMSGKTAAGFDLSGVIASEANFSKGDFREVVMSKAYARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVTGAETRESAGC 594
            FS    A+A      F  PP+ ++K DRC F  SAMGQANAARDKLYDLREC MSG +AA  D+SG + ++ +FSK DF+E  +SK YA       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TEAY+G FDQ+ LCKNPTLKG NPVTGA TRESAGC
Sbjct:   44 FSPIPAAIAADGDITFKFPPIDRSKKDRCTFSGSAMGQANAARDKLYDLRECKMSGASAASLDISGALMAQGDFSKADFKEAQLSKVYAPGAVFDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEAYVGQFDQRKLCKNPTLKGENPVTGAGTRESAGC 218
[Close]
BLAST of mRNA_P-fluviatile_contig15.2434.1 vs. uniprot
Match: A0A7S3B0S2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B0S2_9EUKA)

HSP 1 Score: 143 bits (360), Expect = 2.290e-36
Identity = 123/170 (72.35%), Postives = 138/170 (81.18%), Query Frame = 1 
Query:   91 ALADGSTAKFSLPPVSQA-KDRCVFKSSAMGQANAARDKLYDLRECDMSGKTAAGFDLSGVIASEANFSKGDFREVVMSKAYARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVTGAETRESAGCR 597
            ALADG T+KF  PP+    K+RC F SSAMGQANAARD LYDLR+C M+G  A GFD+SG + +  +FS  +F+E  +SK YA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  TEAY+GD+DQ+ LCKNP LKG NP TGA TRESAGCR
Sbjct:   60 ALADGDTSKFKFPPIDNTNKNRCQFSSSAMGQANAARDSLYDLRQCSMAGTMAMGFDISGALLAGGDFSGVNFKEAQLSKVYAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFTEAYIGDYDQRKLCKNPKLKGENPKTGAPTRESAGCR 229
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BLAST of mRNA_P-fluviatile_contig15.2434.1 vs. uniprot
Match: A0A7S2UM92_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UM92_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.820e-36
Identity = 125/181 (69.06%), Postives = 141/181 (77.90%), Query Frame = 1 
Query:   61 AAVLFSGENMALADGSTAKFSLPPVS-QAKDRCVFKSSAMGQANAARDKLYDLRECDMSGKTAAGFDLSGVIASEANFSKGDFREVVMSKAYARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVTGAETRESAGCRG 600
            A  LF+    +LADG T  F LPP+    K RCV  SSAMGQANAARDKLYDLR+C++SGK A+GFDLSGVI ++ N S    +E   SKAY   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   T+AY+G++D +NLCKNPTLKG NPVTG +TR SA C G
Sbjct:   66 ALTLFTSPMASLADGQTKDFKLPPIDVNDKTRCVLNSSAMGQANAARDKLYDLRQCNLSGKDASGFDLSGVIMTDTNLSNAKLKEAQFSKAYLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADFTDAYIGEYDIRNLCKNPTLKGENPVTGVDTRFSANCVG 246
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BLAST of mRNA_P-fluviatile_contig15.2434.1 vs. uniprot
Match: A0A7S1H2G8_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H2G8_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.830e-36
Identity = 121/178 (67.98%), Postives = 136/178 (76.40%), Query Frame = 1 
Query:   64 AVLFSGENMALADGSTAKFSLPPVS-QAKDRCVFKSSAMGQANAARDKLYDLRECDMSGKTAAGFDLSGVIASEANFSKGDFREVVMSKAYARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVTGAETRESAGC 594
            AV+ S    + ADG T +F LPP+  + K RC   SSA+GQANAARDKLYDLREC +SG+ A GFDLSGVI ++ + SK DF+E   SK Y R        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AY+GDFD +NLCKNPTLKG N VTGA+TR SAGC
Sbjct:   20 AVILSSPMPSYADGQTKEFKLPPIDFKDKSRCTLSSSAIGQANAARDKLYDLRECKLSGEKATGFDLSGVIMTKTDVSKVDFKEAYFSKGYLRDSNFDGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYIGDFDIRNLCKNPTLKGENSVTGADTRLSAGC 197
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BLAST of mRNA_P-fluviatile_contig15.2434.1 vs. uniprot
Match: A0A8J2SQC9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQC9_9STRA)

HSP 1 Score: 141 bits (355), Expect = 8.180e-36
Identity = 125/169 (73.96%), Postives = 139/169 (82.25%), Query Frame = 1 
Query:   94 LADGSTAKFSLPPVS-QAKDRCVFKSSAMGQANAARDKLYDLRECDMSGKTAAGFDLSGVIASEANFSKGDFREVVMSKAYARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAYMGDFDQKNLCKNPTLKGTNPVTGAETRESAGCR 597
            LADG T KF LPP++ +   RCVFKSSAMGQAN ARD L D R+C M+GK+A GFDL+G I SEA+F+   FRE VMSKAYAR  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A++GDF+ +N+CKNPTL G N  TGA TR SAGCR
Sbjct:   46 LADGQTDKFKLPPINFKDTTRCVFKSSAMGQANGARDTLADFRQCSMNGKSADGFDLAGAIMSEADFTSASFRETVMSKAYARDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFIGDFELRNICKNPTLSGENAKTGAPTRASAGCR 214
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2434.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ97_ECTSI6.030e-7590.05Thylakoid lumenal protein n=2 Tax=Ectocarpus TaxID... [more]
A0A836CB03_9STRA3.510e-4974.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D0Q4_9STRA2.190e-4171.43Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
L1ICC6_GUITC2.770e-3760.11Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S0EIA2_9CRYP3.860e-3767.27Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S0LGG3_9EUKA1.280e-3669.14Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S3B0S2_9EUKA2.290e-3672.35Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2UM92_9STRA2.820e-3669.06Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1H2G8_9STRA3.830e-3667.98Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A8J2SQC9_9STRA8.180e-3673.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig15contigP-fluviatile_contig15:1050219..1055977 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score243.0
Seed ortholog evalue1.2e-61
Seed eggNOG ortholog2880.D7FJ97
EggNOG free text desc.Pentapeptide repeats (9 copies)
EggNOG OGs28M7V@1,2QTR1@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionthylakoid lumenal protein
Ec32 orthologEc-12_008340.1
Exons6
Model size1368
Cds size615
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815651.8429158-CDS-P-fluviatile_contig15:1050218..10503701622815651.8429158-CDS-P-fluviatile_contig15:1050218..1050370Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1050219..1050370 +
1693562717.8659737-CDS-P-fluviatile_contig15:1050218..10503701693562717.8659737-CDS-P-fluviatile_contig15:1050218..1050370Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1050219..1050370 +
1622815651.857329-CDS-P-fluviatile_contig15:1050660..10507411622815651.857329-CDS-P-fluviatile_contig15:1050660..1050741Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1050661..1050741 +
1693562718.2793484-CDS-P-fluviatile_contig15:1050660..10507411693562718.2793484-CDS-P-fluviatile_contig15:1050660..1050741Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1050661..1050741 +
1622815651.8701103-CDS-P-fluviatile_contig15:1052342..10524481622815651.8701103-CDS-P-fluviatile_contig15:1052342..1052448Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1052343..1052448 +
1693562718.2867966-CDS-P-fluviatile_contig15:1052342..10524481693562718.2867966-CDS-P-fluviatile_contig15:1052342..1052448Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1052343..1052448 +
1622815651.883919-CDS-P-fluviatile_contig15:1053211..10532861622815651.883919-CDS-P-fluviatile_contig15:1053211..1053286Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1053212..1053286 +
1693562718.2947488-CDS-P-fluviatile_contig15:1053211..10532861693562718.2947488-CDS-P-fluviatile_contig15:1053211..1053286Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1053212..1053286 +
1622815651.8932793-CDS-P-fluviatile_contig15:1054012..10540901622815651.8932793-CDS-P-fluviatile_contig15:1054012..1054090Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1054013..1054090 +
1693562718.3028002-CDS-P-fluviatile_contig15:1054012..10540901693562718.3028002-CDS-P-fluviatile_contig15:1054012..1054090Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1054013..1054090 +
1622815651.90228-CDS-P-fluviatile_contig15:1055101..10552241622815651.90228-CDS-P-fluviatile_contig15:1055101..1055224Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1055102..1055224 +
1693562718.311386-CDS-P-fluviatile_contig15:1055101..10552241693562718.311386-CDS-P-fluviatile_contig15:1055101..1055224Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1055102..1055224 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815651.9133334-UTR-P-fluviatile_contig15:1055224..10559771622815651.9133334-UTR-P-fluviatile_contig15:1055224..1055977Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1055225..1055977 +
1693562718.3242466-UTR-P-fluviatile_contig15:1055224..10559771693562718.3242466-UTR-P-fluviatile_contig15:1055224..1055977Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1055225..1055977 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig15.2434.1prot_P-fluviatile_contig15.2434.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig15 1050219..1055224 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig15.2434.1

>prot_P-fluviatile_contig15.2434.1 ID=prot_P-fluviatile_contig15.2434.1|Name=mRNA_P-fluviatile_contig15.2434.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=205bp
MSLEGTNNAARVAVGTFLAGAAVLFSGENMALADGSTAKFSLPPVSQAKD
RCVFKSSAMGQANAARDKLYDLRECDMSGKTAAGFDLSGVIASEANFSKG
DFREVVMSKAYARSSNWEGADFTNAVVDRVSFDGSSLKGAIFQNAVLTST
SFVGANVENADFTEAYMGDFDQKNLCKNPTLKGTNPVTGAETRESAGCRG
VEVL*
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mRNA from alignment at P-fluviatile_contig15:1050219..1055977+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig15.2434.1 ID=mRNA_P-fluviatile_contig15.2434.1|Name=mRNA_P-fluviatile_contig15.2434.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5759bp|location=Sequence derived from alignment at P-fluviatile_contig15:1050219..1055977+ (Porterinema fluviatile SAG_2381)
ATGTCCCTCGAAGGTACCAACAACGCGGCCCGCGTAGCGGTGGGAACATT
CCTCGCGGGTGCGGCGGTGCTGTTCTCGGGGGAGAATATGGCACTGGCAG
ATGGATCGACGGCCAAGTTCAGCCTCCCGCCGGTGTCGCAGGCAAAGGAT
AGGTGTGTGCGCGCGACATGTTTTTTTAGATTCCACGCGGCATTCTTCTC
TCCCTCTCCTGTCTTTTGTCTCCCCCCATGTGTGTATCCTCGCTCTCCCC
CCCCCACCCCCCACTCCTCTTCTCAATTTCTCTCCCTCTCTCTCTCCCCT
TTTGCTTTGGCAATATTTCGATCCATTCCTTCGCAACTGCGCCCCCCGTG
CATCTTACACCTCAGCTACACTCGACTCTCGACGGCGAATGCATTGTGCC
GCTCGATCAACCCACTCTCTGTCTTCGTGCCTGCTGGACCAGATGCGTTT
TCAAGAGCAGCGCCATGGGCCAGGCAAACGCCGCTAGGGACAAGCTGTAC
GACCTCCGAGAGTGTGACATGAGGTATGCGCGTGGTTGGTGTGTGATGGA
CGTCCATTTTTTTCCCGTCGGGAGTACGGTACGAGGACAGCTGCTCCACG
TCCCGCGTCTCTGAAACGCAAGATCTTGTTGCTGATCTCACCGAGCGTGT
CACACACACCTCCGCCACCTCGCTGCTGCAGCTCGCTGCTGCTGCTGCGT
GTCATGCATAGGCTTGATCTCCGTAGGCGATTGACTGATGTTGGAGGGGG
GGGCGGGATTTCATACTTATATTTGTACGGAATCAAGGTAAGTGCATCTA
AATCGCCTGCAGAGGATGAGCCTTGTCAAACGGTTGGAATTTAGGATTTT
GTCGCCGTCAATGTCGACGGAGTGCATACCGATGCGAACGGGGTGATGCA
TGCACGGATCTTGCCGGGAAGCAGTACGGCAATTCGCGAGAAATGCGGTG
CTTTAAGCTCGCTGTGATGACATTTGAAAGAAGCAATCAAGAGACGGGAC
TCGCAACGGTACCCCGCTTGAGATCGGCGGTAGATTCTCTAGTGAACGTC
AATTTTCAGCTTGCCGTACAAATACAAATACTCCGTGTGTGAAAAGGGTG
TTTGCCCGACCTCGAGATAAGGTGCCCCAAGCCTTATATCATGTGGTACC
CACATACCCCCCCGGATACGAGCGAGCGGACAGCTCAGCATCGTAGACAA
ATACGCGGGTACCACGACGCACCCCCCGTAGCATGTACGGTAACCGGAAC
CCGACCGGCTGGCGGCGGACAAAAAACCATTTTCACGTGCCCGGATTCGA
ACCCGGGACTTTGACATTGCAGGGTGACAATCCTGCCGTCGACGCCACTT
GTGAAAAGGGTGTTTGCCCGACCTCGAGATAAGGTGCCCCAAGCCTTATA
TCATGTGGTACCCACACGTGTTTCTTTTTCTTTTTTCACGGACGCAATTT
GTTTTCACGGAGCCCGCTTTTTTTTTCAGTCTGAAGCACAAGTAGCTCCC
CTGCACAACTCTGCATTGCTGAATAAATTTCATAGATTTTTCGCATTTGC
TCGATTTTCTGCGTCCGCAGCCCGCGGCAGCATGAGGCAAGGGGAACGCT
GTGTTTTTTGTTTTTTGTTTGTCACGCGCGTTTGGTGTTCTTGGCCTGGA
TCAACACCTGCTAATTCGGTTGCCGATACGGCACTTGCTTGATGACGGCA
TCAAACCTTCCAGAATTGGCCGAGTCCAACAAGCCTAAAGGACATTTAAG
GGCTTTACTTCGTCTAATGTTACGACCGGCTCCTGAAAGGTCTCAAACAT
ATCATTCAGACGACATTTCGTTCGTTGAGTTTGTATCAACCTCAGCAACT
TCCTCGGGGAAAATGTATCAAATCCTCGCTGTAGTGGAGAGCGAGCGAGA
GTTGAACATTCGGCCGGGGGTCCGACAGGTGCCGATAAATGCTACCCTTT
ACCGTCTTTTTCGGCATACTCGTTTTGTTGTGAACCAAACGAGAAGAAAT
GAATCTCGGCTTGCTGTCACCGTACCCCCGCAAGCACACACACAATGCTC
CCTACCTCTCAAGGCACATCCACCCGTAAGTTACATGGTACCATCACGAC
CGATATATCTTTTTTTGCCTCCAGCGGGAAGACTGCGGCGGGTTTCGACC
TCAGCGGCGTGATCGCTTCGGAGGCTAACTTCTCTAAGGGCGACTTCAGG
GAGGTGGTCATGTCCAAGGCTTACGCCAGGGTGAGAGCTCGTCGGTTTCA
AAATGAACCTGAATACACACATGCATCGAAGAATAAACACCCCAAATGAG
ACAGGACTCTCGGAGCACAGCGTAGAGTTTCCCCCTTCATTTCAATTGAG
GAAGGCGGGTAGGACAGCGCAGAAAACGTAGGACAGGCTCTCAGTCCCAC
AGCCGATAGCGGGCTATATGTCCACATTTTATGTGCCACATTCGTGTGGC
ATCGTGCGCGGCAGCGCACACTACCACTGCGACTCACGTTTTAAGTTTTC
GAACTATCGTTTAGCCCGAATTTGTTGCAGCCGTGCAGACTGCTCATGGC
AGATGGCGGCAGCGATTTTACACAGCCACCGACAGTACACCTTTGTCGTT
CAATTCACATCTCTGTAGCCTACTTTGCCGGCAATTTTCCCTTCATTTCC
CACCTGCGTTGCTTTGATTTGCGTCACGTTGCGACATTTCCTGCCGAATA
CCACTCCCCACTCACCATCGCCGAAAGCGGCAGCACCAGCTGCTGCAGCG
AAGTGGCATTTTTGTGAAACTGGCTGACGAGCGGGCTAGGCACGCTCTGC
CAACTCTCAGCTGGCATTCCGCTTCCCACCCTTCGTCGTACGGTCTCCCG
CTTTCCTCTCCAACCACCACGTCTTCATCCACCTGTTCCGTCGCCGTTTT
CCTCTCTTCCTCTTTGCCCGGCCCGCACTTGCCTTTTGGTTGCTATTTCT
GGTTTGCGCGCGCCCGGGGGGGTAATTTACGGGGTCCCGGCAGAGCTCCA
ATTGGGAAGGCGCTGACTTCACGAATGCCGTGGTGGACAGGGTTTCTTTC
GACGGCTCTTCCCTCAAGGTACGACGACGTGCGGGCGACCTTTGGATTGA
AGACGAGGCAGACAAACAGAAAGAGAACAGCAAGCACCCTGCATGAAGTG
TGCACGAACAAGCAGTGTGAGCATACCTCTTTTTATCCTTTATTTGTGTG
CATGTCAAGGGCGTGCGCTCCTTAAGGTGGCACACGGACCGAGTTGCGCC
CCCCGAAAGGCTTTGTTTCCACTGCTTTGGGACCAGTCACACTGGGCCGC
AGTCAACGGGAAATTATTCCCCTTTTCTTGTCTACCTTCCTGTTGCCAAA
TAACAATGCGGATTGCTTCCTCTGTCAATTGTGCTGCTCTGGACAAAAGT
GGGGGGTCCCGAAAATTGCGGGTTGAATAGTGGGGGTCTCTGGTATCGTC
TGGGTGAAAATCAGTTGGCATGAACGTTCTATCACATCCTAATATCTATT
ATACTTCGCAGTATTTACCCCCTTCTGAAAAGTGCGGTTGCCCGCCAGAC
TGCGGGAGGAATTTCCCGTCCAACCCCCCCACCACTGAGACCCCTGTTTT
TTATATTTGTGTTTCATGTGCCCCCTACAAATGTCCGACCGGCAACTCAA
TTACTGATGGACTCAGCGCCCGATCCCTCAGCAACGAAATATTTAAATAT
TTCATTTCTGTACACGGGCGGACATCGCTCATGCCCTCTGTTGTGGTCGG
GGCGACCCTCTATTGTGGTCGTAATTTCCTCGCGTGCATCACAGGGCGCC
ATCTTCCAAAACGCCGTCCTGACGAGCACCAGCTTCGTGGGAGCAAACGT
TGAGAACGCCGACTTCACGGAGGTGCGATGCGTGGATTGCTTCACCTGCC
GCACCTTTCCTAATATGTTCTACAATCAGCACATGAAAGCAGGATGAACA
CCATCAGATGGGACTCACGGTGACCCGTTGTAGCAGCGGTTCATTCGTTA
CAGTTATGGGTTTCATTAGGCGGGCCGGGTTAAAAACATTTCCAAATCTC
TTGTTTGCTGCGCGCCCGGATGTCGGGGGTGGATCTCACGGTCGCCGTCC
ACTCCGTGACTGTGTGCGAATACGAAGGCCGCCTCCTTTATCTAGCCGCC
TCCGCCGCTCACCACTCCTCGTGTAGGCGGGCCCACTGGCCCGGGCCCCG
CGTTTTCTCGCCCCTTGCCCATCCATTCTTGCCGCTGGTAGGCGTGTACC
ATTGTGCGCGCGGGAGGTTGTCTGGTCTCGAACGTAGCAACACCTCCGGT
GACCGGTAGCAAAATACTGGCTTAGATAAAGGCGAGCGGACGGCCGTAGA
CGGGTGATAAATAACTCTTGTGACGTACCTGTACAACATGCATGCGAAAA
ATTCGAAGGAAAATCCGAAATGTAAGAAACGGCAGAGCTGCCGTTTTGTC
CGATGCGACCCTCGCTGAGGATTGCTCAGCGGTACTGAAGCACAGGGTGG
TGAAATCAAGAACTCGTGAGAGGAAATAAATGTACTGCTAGCACAAGAAG
GACAGGGCAGCACAAGCCGTTCGCGTCAACGAGTTTAAGCCTTAGGCCTC
TCGCTATTTCGCTCTCCTCCTTCTCGATCTGCTGCCGCTGGTCTAGATTT
TCTACTGCTCAAGTCAATCCAGGCCCACATTAGGGATTTTTCTGAGAAAT
CGTAGTGGAAATACTTAACCCTCAAACAACAATTCCTTGAGGAAAAGCAG
GCACGCTGTCAAAAACCCCGGTCGCATCCCTTTACGGAAGCTGAAGGCCT
CTCGCTCTCTCGCCGTCCCCCGACGAGATCTGCTAACCGCCGACGTCTGC
GTTCTCTTTCCCTTGTACAACCGGCCAACCCAGGCGTACATGGGGGACTT
TGACCAGAAAAATCTGTGCAAGAATCCAACCCTCAAGGGCACCAACCCTG
TGACCGGCGCCGAAACGAGAGAGAGCGCCGGATGCCGGGGCGTAGAAGTG
CTGTAAATCAGGGGCGACGGATTGAACGAGTTGTCCGACAGGAGGATTGC
CATGTAATCCGAGGAGTGCTATATACGCAGAATGCGATAAACAATATTTA
ATTTGTTGGGCGCTCTGGACAGGGAAGAGGGAAGACGACGACGTCGTTCA
ACGTGTCAGTTCGTGGCGCCGACTTCACTTTTTTGGGGGTTTTGCCGTTG
CTATGTTGCAGCTGGCTGCTGGTATTGCGATGCCGCACAACGGCGGGTGG
TGTCTCGTCCCAGTGTGGGGTTGAGACGGGAGGGGCCCAACCAAGAAGGC
CGGCTTCCGGGAACTAGTTGTTCTCGTGCCATGGTACGCCTTTCCAGTTT
ACCGCCTTCCCGTACCGACTTGGGGAATGGAAGTCGAGGTCACGCCACAC
GGAGGACCATTCAACCAACCGCTTAAGCGGCAGAAACGAACTGCTTGGCC
CGGGCATCGATTGGGGTATGTGTCTGTGTCCGTGGTCGTGGAGCGGGTCT
CGCTGTCTGAAGGAAGTTGAAGCAAATGCGCTGTTGTGTCAGCTTCGAAG
CAGCCTCTGTTGCTGCTGTTAGGAACGGGTTTTCATGGACGGCTTCCACA
GGAAAAGGTTGAGAAGACAGACGTAGAATATGACTAACTCTGAACAAGAC
GAGTAGAAAAGACCCACGTGTGAAGTTTGATATGGGTTTCCTCTTCGTGC
TGCTTCCCTCGCCAAAACTGACGGGTTCGGCTAGGTCCTGGCGCCTACTA
GACTATACT
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Coding sequence (CDS) from alignment at P-fluviatile_contig15:1050219..1055977+

>mRNA_P-fluviatile_contig15.2434.1 ID=mRNA_P-fluviatile_contig15.2434.1|Name=mRNA_P-fluviatile_contig15.2434.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1230bp|location=Sequence derived from alignment at P-fluviatile_contig15:1050219..1055977+ (Porterinema fluviatile SAG_2381)
ATGTCCCTCGAAGGTACCAACAACGCGGCCCGCGTAGCGGTGGGAACATT
CCTCGCGGGTGCGGCGGTGCTGTTCTCGGGGGAGAATATGGCACTGGCAG
ATGGATCGACGGCCAAGTTCAGCCTCCCGCCGGTGTCGCAGGCAAAGGAT
AGATGTCCCTCGAAGGTACCAACAACGCGGCCCGCGTAGCGGTGGGAACA
TTCCTCGCGGGTGCGGCGGTGCTGTTCTCGGGGGAGAATATGGCACTGGC
AGATGGATCGACGGCCAAGTTCAGCCTCCCGCCGGTGTCGCAGGCAAAGG
ATAGATGCGTTTTCAAGAGCAGCGCCATGGGCCAGGCAAACGCCGCTAGG
GACAAGCTGTACGACCTCCGAGAGTGTGACATGAGATGCGTTTTCAAGAG
CAGCGCCATGGGCCAGGCAAACGCCGCTAGGGACAAGCTGTACGACCTCC
GAGAGTGTGACATGAGCGGGAAGACTGCGGCGGGTTTCGACCTCAGCGGC
GTGATCGCTTCGGAGGCTAACTTCTCTAAGGGCGACTTCAGGGAGGTGGT
CATGTCCAAGGCTTACGCCAGGCGGGAAGACTGCGGCGGGTTTCGACCTC
AGCGGCGTGATCGCTTCGGAGGCTAACTTCTCTAAGGGCGACTTCAGGGA
GGTGGTCATGTCCAAGGCTTACGCCAGGAGCTCCAATTGGGAAGGCGCTG
ACTTCACGAATGCCGTGGTGGACAGGGTTTCTTTCGACGGCTCTTCCCTC
AAGAGCTCCAATTGGGAAGGCGCTGACTTCACGAATGCCGTGGTGGACAG
GGTTTCTTTCGACGGCTCTTCCCTCAAGGGCGCCATCTTCCAAAACGCCG
TCCTGACGAGCACCAGCTTCGTGGGAGCAAACGTTGAGAACGCCGACTTC
ACGGAGGGCGCCATCTTCCAAAACGCCGTCCTGACGAGCACCAGCTTCGT
GGGAGCAAACGTTGAGAACGCCGACTTCACGGAGGCGTACATGGGGGACT
TTGACCAGAAAAATCTGTGCAAGAATCCAACCCTCAAGGGCACCAACCCT
GTGACCGGCGCCGAAACGAGAGAGAGCGCCGGATGCCGGGGCGTAGAAGT
GCTGTAAGCGTACATGGGGGACTTTGACCAGAAAAATCTGTGCAAGAATC
CAACCCTCAAGGGCACCAACCCTGTGACCGGCGCCGAAACGAGAGAGAGC
GCCGGATGCCGGGGCGTAGAAGTGCTGTAA
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