mRNA_P-fluviatile_contig15.2431.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig15.2431.1 vs. uniprot
Match: D7FJA1_ECTSI (Putative Leucine Rich Repeat Protein Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJA1_ECTSI) HSP 1 Score: 283 bits (725), Expect = 3.650e-85 Identity = 246/289 (85.12%), Postives = 262/289 (90.66%), Query Frame = 2
Query: 872 LPGAVLRSGLFFQRVTALSLPGQGIADGEVPTLVSRLAGSLRKVDLSGNRLTAVPPGLLGLGPALEELNLGNNKIMELPPEIARLTELLILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCRLAVNPGLAAVPEGFWFAERLAWVSLAGSAWCARTMEKRRKSTFPVIPREEVVLGERLGSGASGDVFAGVYRGQDVAVKVFKSSVGPDGNAHDELEVACAIDHPNL 1738
LPG VLRSGL FQRVTALS+PGQGI DG+VP V RLAG LRKVDLSGNRLTAVPPGLLGLG LE+LNLGNN I E+PPEIA+L LL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCRLAVNPGL VPEG +AE+LAWVSLAGSAWCAR EKRR+++FP IPREEVVLGERLGSGASG+VFAGVYRG+DVAVKVFK+ +GPDGNA DEL+VA +DHPNL
Sbjct: 4 LPGIVLRSGLVFQRVTALSMPGQGIGDGDVPASVVRLAGVLRKVDLSGNRLTAVPPGLLGLGAGLEDLNLGNNDIAEMPPEIAKLGGLLFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCRLAVNPGLTVVPEGLTYAEKLAWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAGVYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNL 292
BLAST of mRNA_P-fluviatile_contig15.2431.1 vs. uniprot
Match: A0A6H5L0B3_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B3_9PHAE) HSP 1 Score: 114 bits (284), Expect = 3.020e-23 Identity = 58/86 (67.44%), Postives = 67/86 (77.91%), Query Frame = 2
Query: 1481 LAWVSLAGSAWCARTMEKRRKSTFPVIPREEVVLGERLGSGASGDVFAGVYRGQDVAVKVFKSSVGPDGNAHDELEVACAIDHPNL 1738
+A V LA + W T +FP IPREEVVLGERLGSGASG+VFAGVYRG+DVAVKVFK+ +GPDGNA DEL+VA +DHPNL
Sbjct: 19 VAVVVLAVAVWKGVT-------SFPDIPREEVVLGERLGSGASGEVFAGVYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNL 97
BLAST of mRNA_P-fluviatile_contig15.2431.1 vs. uniprot
Match: I0Z463_COCSC (L domain-like protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z463_COCSC) HSP 1 Score: 85.5 bits (210), Expect = 4.350e-14 Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = 2
Query: 1484 AWVSLAGSAWCARTMEKRRKSTFPVIPREEVVLGERLGSGASGDVFAGVYRGQDVAVKVFKSSVGPDGNAHDELEVACAIDHPNL 1738
AW+SLAG+ C +T + + FP + +++ LG LG GASGDV+A +DVAVKVFK V PDG A DE+ V C +DHP+L
Sbjct: 189 AWMSLAGNPICPQTPVRGQ---FPAMTIDQLSLGVSLGEGASGDVYAAKLGAEDVAVKVFKGEVSPDGRAADEIAVTCYVDHPHL 270
BLAST of mRNA_P-fluviatile_contig15.2431.1 vs. uniprot
Match: A0A836C659_9CHLO (Protein kinase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C659_9CHLO) HSP 1 Score: 85.1 bits (209), Expect = 9.410e-14 Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 2
Query: 1478 RLAWVSLAGSAWCARTMEKRRKSTFPVIPREEVVLGERLGSGASGDVFAGVYRGQDVAVKVFKSSVGPDGNAHDELEVACAIDHPNL 1738
RLAW S+AG+ C P++ REE+ LG++LG GASGDVF V+RG+ VAVK F++ V PDG DE+ +A A+ HP+L
Sbjct: 264 RLAWFSVAGNPACPDPPPPA--PGLPLVAREELELGQKLGDGASGDVFRAVWRGELVAVKFFRADVSPDGRTEDEVALAIALQHPHL 348
BLAST of mRNA_P-fluviatile_contig15.2431.1 vs. uniprot
Match: A0A835WDB1_9CHLO (Protein kinase domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WDB1_9CHLO) HSP 1 Score: 83.2 bits (204), Expect = 4.220e-13 Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 2
Query: 1478 RLAWVSLAGSAWCARTMEKRRKSTFPVIPREEVVLGERLGSGASGDVFAGVYRGQDVAVKVFKSSVGPDGNAHDELEVACAIDHPNL 1738
RLAW S+AG+ C PV+ R+E+ LG++LG GASGDV+ V+RGQ VAVK F++ V PDG DE+ +A ++ HP+L
Sbjct: 271 RLAWFSVAGNPVCPDPPAPA--PGLPVVCRDELELGQKLGDGASGDVYRAVWRGQLVAVKFFRADVSPDGRTEDEVALAISLQHPHL 355
BLAST of mRNA_P-fluviatile_contig15.2431.1 vs. uniprot
Match: A0A150GRA6_GONPE (Protein kinase domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GRA6_GONPE) HSP 1 Score: 82.4 bits (202), Expect = 5.280e-13 Identity = 37/87 (42.53%), Postives = 58/87 (66.67%), Query Frame = 2
Query: 1478 RLAWVSLAGSAWCARTMEKRRKSTFPVIPREEVVLGERLGSGASGDVFAGVYRGQDVAVKVFKSSVGPDGNAHDELEVACAIDHPNL 1738
RLAW S+AG+ C R++ P + +E+ LG++LG GASG+V+ +++G+ VAVK F+S V PDG DE+ +A A+ HP++
Sbjct: 193 RLAWFSVAGNPACPEP--PAREAVLPEVDEDELELGQKLGDGASGEVYRAIWKGELVAVKFFRSDVSPDGRTEDEVALAIALQHPHV 277
BLAST of mRNA_P-fluviatile_contig15.2431.1 vs. uniprot
Match: A0A835TFM4_CHLIN (Protein kinase domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TFM4_CHLIN) HSP 1 Score: 82.8 bits (203), Expect = 5.410e-13 Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 2
Query: 1478 RLAWVSLAGSAWCARTMEKRRKSTFPVIPREEVVLGERLGSGASGDVFAGVYRGQDVAVKVFKSSVGPDGNAHDELEVACAIDHPNL 1738
RLAW S+AG+ C PV+ EE+ LG++LG GASGDVF V+RGQ VAVK F++ V PDG DE+ +A + HP+L
Sbjct: 270 RLAWFSVAGNPVCPGP--PCAAPGLPVVAPEELELGQKLGDGASGDVFRAVWRGQLVAVKFFRADVSPDGRTEDEVALAIGLQHPHL 354
BLAST of mRNA_P-fluviatile_contig15.2431.1 vs. uniprot
Match: A0A2J8A716_9CHLO (Leucine-rich repeat-containing protein 1 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A716_9CHLO) HSP 1 Score: 82.8 bits (203), Expect = 5.560e-13 Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 2
Query: 1481 LAWVSLAGSAWCARTMEKRRKSTFPVIPREEVVLGERLGSGASGDVFAGVYRGQDVAVKVFKSSVGPDGNAHDELEVACAIDHPNL 1738
LAW S+AG+ C P++ +EE+ LG++LG GASGDVF V+RGQ VAVK F++ V PDG DE+ +A A+ HP+L
Sbjct: 298 LAWFSVAGNPVCPDPPPPA--PGLPLVAQEELELGQKLGEGASGDVFRAVWRGQLVAVKFFRADVSPDGRTEDEVALAVALQHPHL 381
BLAST of mRNA_P-fluviatile_contig15.2431.1 vs. uniprot
Match: A0A2K3DNM2_CHLRE (Protein kinase domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DNM2_CHLRE) HSP 1 Score: 82.4 bits (202), Expect = 7.250e-13 Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 2
Query: 1478 RLAWVSLAGSAWCARTMEKRRKSTFPVIPREEVVLGERLGSGASGDVFAGVYRGQDVAVKVFKSSVGPDGNAHDELEVACAIDHPNL 1738
RLAW S+AG+ C PV+ EE+ LG++LG GASGDV+ V+RGQ VAVK F++ V PDG DE+ +A ++ HP+L
Sbjct: 271 RLAWFSVAGNPVCPGPPAPA--PGLPVVAPEELELGQKLGDGASGDVYRAVWRGQLVAVKYFRADVSPDGRTEDEVALAVSLQHPHL 355
BLAST of mRNA_P-fluviatile_contig15.2431.1 vs. uniprot
Match: A0A7S1CVX0_9CHLO (Hypothetical protein n=1 Tax=Picochlorum oklahomense TaxID=249345 RepID=A0A7S1CVX0_9CHLO) HSP 1 Score: 80.1 bits (196), Expect = 4.110e-12 Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = 2
Query: 1442 LAAVPEGFWFAERLAWVSLAGSAWCARTMEKRRKSTFPVIPREEVVLGERLGSGASGDVFAGVYRGQDVAVKVFKSSVGPDGNAHDELEVACAIDHPNL 1738
L +PE A L+W+S+AG+ +K + P + ++V++G++LG GASG+VF G Y+ + VAVK+F+ PDG+ DE+ +AC + NL
Sbjct: 264 LQHIPESLMNAHSLSWLSIAGNPLAGSL----KKPSAPCVSIDDVMVGKKLGDGASGEVFEGEYKKKQVAVKLFRKDTSPDGHCEDEIAIACMLHDDNL 358 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig15.2431.1 >prot_P-fluviatile_contig15.2431.1 ID=prot_P-fluviatile_contig15.2431.1|Name=mRNA_P-fluviatile_contig15.2431.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=297bp MASLGGRPWSWGINAPMAVAMAVVLLAVAAWKTSDPKASVGDHGDLSPPSback to top mRNA from alignment at P-fluviatile_contig15:1016731..1021156- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig15.2431.1 ID=mRNA_P-fluviatile_contig15.2431.1|Name=mRNA_P-fluviatile_contig15.2431.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4426bp|location=Sequence derived from alignment at P-fluviatile_contig15:1016731..1021156- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig15:1016731..1021156- >mRNA_P-fluviatile_contig15.2431.1 ID=mRNA_P-fluviatile_contig15.2431.1|Name=mRNA_P-fluviatile_contig15.2431.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1782bp|location=Sequence derived from alignment at P-fluviatile_contig15:1016731..1021156- (Porterinema fluviatile SAG_2381)back to top |