mRNA_P-fluviatile_contig15.2415.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig15.2415.1
Unique NamemRNA_P-fluviatile_contig15.2415.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig15.2415.1 vs. uniprot
Match: D8LN00_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN00_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 6.740e-113
Identity = 166/227 (73.13%), Postives = 186/227 (81.94%), Query Frame = 2 
Query:  122 CVHSQRNMIRPSLTACVMFAVCSTIRGQVELPPLPYAQDALKEYISEETVSFHYGKHHQGYVNNLNTFIEEDPSLAGLSLWRIMQKTKEGKVFNNAAQIYNHNLYWESLSPNGGGEPSGELYTAIVTAFGSYEKFKEAFTLLASGHFGSGWAWLTMHEDGSVDVVDSHDASNPVVEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWKYAEAEYARVMAKW 802
            C+ S R  +  +L   +    CS   GQVELP LPY +  L+ YI+ ETV FHYG HHQGYVNN+N FIE DP L GLSLW++M++T EG +FNNAAQIYNHNLYW SLSP+GGG P+G+LYTAIV AFGSYE F+ AFT LASGHFGSGWAWL MHEDGSVDVVDSHDASNPV EGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNW YAE+EY RV+ K+
Sbjct:    3 CITSSRFCLWGAL---IFSFCCSQGYGQVELPALPYGESDLEPYITAETVGFHYGAHHQGYVNNMNAFIEADPELEGLSLWKLMKQT-EGTIFNNAAQIYNHNLYWNSLSPSGGGMPTGDLYTAIVAAFGSYEDFQTAFTDLASGHFGSGWAWLMMHEDGSVDVVDSHDASNPVSEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWDYAESEYTRVLNKY 225
[Close]
BLAST of mRNA_P-fluviatile_contig15.2415.1 vs. uniprot
Match: D7FRS6_ECTSI (Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRS6_ECTSI)

HSP 1 Score: 335 bits (860), Expect = 7.920e-108
Identity = 157/214 (73.36%), Postives = 176/214 (82.24%), Query Frame = 2 
Query:  170 VMFAVCSTIRGQVELPPLPYAQDALKEYISEETVSFHYGKHHQGYVNNLNTFIEEDPSLAGLSLWRIMQKTKEGKVFNNAAQIYNHNLYWESLSPNGGGEPSGELYTAIVTAFGSYEKFKEAFTLLASGHFGSGWAWLTMHEDGSVDVVDSHDASNPVVEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWKYAEAEYARVMAKWGAK 811
            ++   C    GQVELP LPY +  L+ YI+EETV FHYG HHQGYVNN+N FIE DP L GLSL  +M +T EG +FNNAAQIYNHNLYW SLSP+GGG P G+LYTAI +AFGSYE+F+  FT LASGHFGSGWAWL MHEDGSVDVVDSHDASNP  +GLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNW YAE+EY RV+ ++  K
Sbjct:   16 LLIPFCPQGYGQVELPALPYGESDLEPYITEETVGFHYGAHHQGYVNNMNAFIEADPDLEGLSLSALMDQT-EGTIFNNAAQIYNHNLYWNSLSPSGGGVPEGDLYTAIQSAFGSYEEFQTTFTDLASGHFGSGWAWLMMHEDGSVDVVDSHDASNPESDGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWDYAESEYTRVLDEYNKK 228
[Close]
BLAST of mRNA_P-fluviatile_contig15.2415.1 vs. uniprot
Match: W7T7U7_9STRA (Superoxide dismutase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7U7_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.210e-74
Identity = 109/193 (56.48%), Postives = 143/193 (74.09%), Query Frame = 2 
Query:  206 VELPPLPYAQDALKEYISEETVSFHYGKHHQGYVNNLNTFIEEDPSLAGLSLWRIMQKTKEGKVFNNAAQIYNHNLYWESLSPNGGGEPSGELYTAIVTAFGSYEKFKEAFTLLASGHFGSGWAWLTMHEDGSVDVVDSHDASNPVVEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWKYAEAEYA 784
            +ELPPLP+ ++AL  +IS ET+ +HYGKHH  YV  LN  I++DP+ AG S+  IM     G +FNNAAQ++NH  YW S++PN GG PSG +   I  AFGS++ FK  F+  A+GHFGSGWAWL + +DG ++VV +HDASNP+ EGLG PLL CDVWEHAYY+DY+N R +Y+E WW+LVNW++A A  A
Sbjct:    3 IELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVL-KDGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARLA 194
[Close]
BLAST of mRNA_P-fluviatile_contig15.2415.1 vs. uniprot
Match: A0A7S2V2G5_9STRA (Superoxide dismutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G5_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.240e-73
Identity = 112/192 (58.33%), Postives = 139/192 (72.40%), Query Frame = 2 
Query:  206 VELPPLPYAQDALKEYISEETVSFHYGKHHQGYVNNLNTFIEEDPSLAGLSLWRIMQKTKEGKVFNNAAQIYNHNLYWESLSPNGGGEPSGELYTAIVTAFGSYEKFKEAFTLLASGHFGSGWAWLTMHEDGSVDVVDSHDASNPVVEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWKYAEAEY 781
            ++LPPLPY + AL  +ISEET+SFHY KHH GYV  LN  +       G SL  IM     G +FNNAAQI+NH  YW S+SPNGGGEPSG +  AI ++FGS+E FKE F+  A GHFGSGWAWL   +DGS+++VD+HDASNP+ EG G P+L CDVWEHAYY+DY+N R SYI  WW ++NW +A + Y
Sbjct:    3 IQLPPLPYEKGALAPHISEETLSFHYEKHHAGYVTKLNAALPGS-EFEGKSLEEIMMNASGG-MFNNAAQIWNHTFYWNSMSPNGGGEPSGPISDAINSSFGSFESFKEKFSASAGGHFGSGWAWLCKKDDGSLEIVDTHDASNPLKEGKGKPILTCDVWEHAYYIDYRNARPSYIAAWWNVINWDFANSNY 192
[Close]
BLAST of mRNA_P-fluviatile_contig15.2415.1 vs. uniprot
Match: D8LI17_ECTSI (Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI17_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 1.800e-73
Identity = 115/194 (59.28%), Postives = 138/194 (71.13%), Query Frame = 2 
Query:  206 VELPPLPYAQDALKEYISEETVSFHYGKHHQGYVNNLNTFIEEDPSLAGLSLWRIMQKTKEGKVFNNAAQIYNHNLYWESLSPNGGGEPSGELYTAIVTAFGSYEKFKEAFTLLASGHFGSGWAWLTMHEDGSVDVVDSHDASNPVVEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWKYAEAEYAR 787
            + LP LP+A+DAL  +IS ET+ +HYGKHH  YV  LN  I  +  L G SL  IM KT  G VFNNAAQ++NH  YW+SLSP+GGGEP+G +  AI   FGS+E FK+AF+  A+GHFGSGWAWL   E G VDVV +HDASNPV EG G P+L CDVWEHAYY+DY+N R  YI  WW LVNW +A    A+
Sbjct:    3 IVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISTNSELEGKSLDEIM-KTASGGVFNNAAQVWNHTFYWKSLSPSGGGEPTGAVKEAIEEKFGSFEAFKKAFSDTAAGHFGSGWAWLVKTESGGVDVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANENLAK 195
[Close]
BLAST of mRNA_P-fluviatile_contig15.2415.1 vs. uniprot
Match: A0A356T2V4_9DELT (Superoxide dismutase n=2 Tax=Myxococcales TaxID=29 RepID=A0A356T2V4_9DELT)

HSP 1 Score: 241 bits (616), Expect = 3.190e-72
Identity = 113/189 (59.79%), Postives = 141/189 (74.60%), Query Frame = 2 
Query:  212 LPPLPYAQDALKEYISEETVSFHYGKHHQGYVNNLNTFIEEDPSLAGLSLWRIMQKTKEGKVFNNAAQIYNHNLYWESLSPNGGGEPSGELYTAIVTAFGSYEKFKEAFTLLASGHFGSGWAWLTMHEDGSVDVVDSHDASNPVVEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWKYAEAE 778
            LP LPYA+DAL  +IS+ET+ FHYGKHHQGYVN LN  +E+D SL G SL  ++ KT++G VFNNAAQ++NH  YW SLSPNGGGEP+G++  AI  +FGS+  FKE F+  ASGHF SGWAW+    DG +D+VD HDA NP+  G   P+L CDVWEHAYY+DY+N R  YI  WW LVNW +A ++
Sbjct:    5 LPELPYAKDALAPHISKETLEFHYGKHHQGYVNKLNKAVEDDASLQGKSLEDLI-KTQKGGVFNNAAQVWNHTFYWNSLSPNGGGEPTGKIADAIKKSFGSFSDFKEQFSKAASGHFASGWAWVVTSGDG-LDIVDLHDAGNPLTMGKT-PVLTCDVWEHAYYIDYRNARPDYIAAWWNLVNWDHANSQ 190
[Close]
BLAST of mRNA_P-fluviatile_contig15.2415.1 vs. uniprot
Match: I7IGD3_BABMR (Superoxide dismutase n=1 Tax=Babesia microti (strain RI) TaxID=1133968 RepID=I7IGD3_BABMR)

HSP 1 Score: 237 bits (605), Expect = 1.390e-70
Identity = 103/190 (54.21%), Postives = 136/190 (71.58%), Query Frame = 2 
Query:  209 ELPPLPYAQDALKEYISEETVSFHYGKHHQGYVNNLNTFIEEDPSLAGLSLWRIMQKTKEGKVFNNAAQIYNHNLYWESLSPNGGGEPSGELYTAIVTAFGSYEKFKEAFTLLASGHFGSGWAWLTMHEDGSVDVVDSHDASNPVVEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWKYAEAE 778
            +LP LPY+  ALK +ISEET+SFHYGKHH GY+N LN  ++       L+L  ++ KT  G +FNNAAQ +NHN YW S+SPNGGGEP G +   I   FG++E FK+ ++ L  GHFGSGW WL   +DG+VD+V +HDA NP+ +G G P+L CD+WEHAYYLDY+N RASY+  WW  +NW++A  +
Sbjct:    4 KLPTLPYSLSALKPHISEETLSFHYGKHHAGYINKLNALVK-GTKFESLTLEELL-KTTSGAIFNNAAQSWNHNFYWNSMSPNGGGEPFGAVKQKINEKFGTFESFKKEYSSLLVGHFGSGWGWLVQRQDGTVDIVQTHDAGNPIADGTGKPILACDIWEHAYYLDYKNDRASYVNAWWNTINWEFANKQ 191
[Close]
BLAST of mRNA_P-fluviatile_contig15.2415.1 vs. uniprot
Match: A0A661MY79_9DELT (Superoxide dismutase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661MY79_9DELT)

HSP 1 Score: 235 bits (599), Expect = 1.020e-69
Identity = 113/189 (59.79%), Postives = 138/189 (73.02%), Query Frame = 2 
Query:  209 ELPPLPYAQDALKEYISEETVSFHYGKHHQGYVNNLNTFIEEDPSLAGLSLWRIMQKTKEGKVFNNAAQIYNHNLYWESLSPNGGGEPSGELYTAIVTAFGSYEKFKEAFTLLASGHFGSGWAWLTMHEDGSVDVVDSHDASNPVVEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWKYAEA 775
            ELP LPY +DAL  +IS  T+ FHYGKHHQGYVN LN   E D S+AG SL  ++ +T EG VFNNAAQI+NH  YW S+SP+GGGEP+G++  AI  +FGS+  FK+ F+  A+GHFGSGWA+L    D  + +V  HDA NP+ +G   PLL CDVWEHAYYLDYQN R  YIE WW LVNWK+AE+
Sbjct:    4 ELPALPYEKDALAPHISANTLGFHYGKHHQGYVNKLNAAAEADSSIAGKSLEDLV-RTAEGGVFNNAAQIWNHTCYWNSMSPDGGGEPTGKIAEAIKASFGSFSDFKDQFSKTAAGHFGSGWAFLVKDGD-RLAIVGEHDAGNPLRDGKT-PLLTCDVWEHAYYLDYQNARPKYIEAWWNLVNWKFAES 189
[Close]
BLAST of mRNA_P-fluviatile_contig15.2415.1 vs. uniprot
Match: UPI0015534675 (superoxide dismutase [Fe] n=1 Tax=Permianibacter fluminis TaxID=2738515 RepID=UPI0015534675)

HSP 1 Score: 231 bits (589), Expect = 2.940e-68
Identity = 111/191 (58.12%), Postives = 139/191 (72.77%), Query Frame = 2 
Query:  209 ELPPLPYAQDALKEYISEETVSFHYGKHHQGYVNNLNTFIEEDPSLAGLSLWRIMQKTKEGKVFNNAAQIYNHNLYWESLSPNGGGEPSGELYTAIVTAFGSYEKFKEAFTLLASGHFGSGWAWLTMHEDGSVDVVDSHDASNPVVEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWKYAEAEY 781
            ELPPLPY + AL  +ISEET++FHYGKHHQ YV+NLN  +    +  G SL  IM K+ +G V+NNAAQI+NH  YW SL+PN GGEP+G L  AI  AFGS+  FKE FT  A G+FGSGW WL    DGSVD+V++  A NP+++G   PLL CDVWEHAYY+DY+N RA Y+E +WALVNW++A   +
Sbjct:    4 ELPPLPYVRTALAPHISEETLNFHYGKHHQTYVDNLNKLVP-GTAFEGKSLEEIM-KSSQGGVYNNAAQIWNHTFYWHSLAPNAGGEPTGALADAINKAFGSFAAFKEKFTASALGNFGSGWTWLVKKADGSVDIVNTGAAGNPMLDGHT-PLLTCDVWEHAYYIDYRNARAKYVEAFWALVNWQFASKNF 191
[Close]
BLAST of mRNA_P-fluviatile_contig15.2415.1 vs. uniprot
Match: UPI0018DDE1CB (superoxide dismutase [Fe] n=1 Tax=methane-oxidizing endosymbiont of Gigantopelta aegis TaxID=2794938 RepID=UPI0018DDE1CB)

HSP 1 Score: 229 bits (584), Expect = 1.580e-67
Identity = 111/191 (58.12%), Postives = 136/191 (71.20%), Query Frame = 2 
Query:  209 ELPPLPYAQDALKEYISEETVSFHYGKHHQGYVNNLNTFIEEDPSLAGLSLWRIMQKTKEGKVFNNAAQIYNHNLYWESLSPNGGGEPSGELYTAIVTAFGSYEKFKEAFTLLASGHFGSGWAWLTMHEDGSVDVVDSHDASNPVVEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWKYAEAEY 781
            ELPPLPYA+DAL  +ISEET+ +HYGKHHQ YV NLN  +       G SL  I+ KT  G +FNNAAQI+NH  YW SLSPNGGGEP+GEL  AI   FGS+E+FKEAFT  A   FGSGWAWL  + +G++++V + +A  P+ EG   PLL CDVWEHAYY+DY+N R  Y+E +W LVNW +A   Y
Sbjct:    4 ELPPLPYAKDALAPHISEETLEYHYGKHHQTYVTNLNNLVP-GTEFEGKSLEEII-KTSSGGIFNNAAQIWNHTFYWNSLSPNGGGEPTGELANAINRTFGSFEEFKEAFTKCAVTTFGSGWAWLVKNPNGTLELVSTSNAGCPLTEGQT-PLLTCDVWEHAYYIDYRNARPKYLEAFWNLVNWDFAAKNY 191
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN00_ECTSI6.740e-11373.13Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
D7FRS6_ECTSI7.920e-10873.36Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879... [more]
W7T7U7_9STRA1.210e-7456.48Superoxide dismutase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7S2V2G5_9STRA1.240e-7358.33Superoxide dismutase n=1 Tax=Fibrocapsa japonica T... [more]
D8LI17_ECTSI1.800e-7359.28Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A356T2V4_9DELT3.190e-7259.79Superoxide dismutase n=2 Tax=Myxococcales TaxID=29... [more]
I7IGD3_BABMR1.390e-7054.21Superoxide dismutase n=1 Tax=Babesia microti (stra... [more]
A0A661MY79_9DELT1.020e-6959.79Superoxide dismutase n=1 Tax=Deltaproteobacteria b... [more]
UPI00155346752.940e-6858.12superoxide dismutase [Fe] n=1 Tax=Permianibacter f... [more]
UPI0018DDE1CB1.580e-6758.12superoxide dismutase [Fe] n=1 Tax=methane-oxidizin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig15contigP-fluviatile_contig15:846446..853013 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score348.6
Seed ortholog evalue2.2e-93
Seed eggNOG ortholog2880.D8LN00
Preferred nameSODB1
KEGG koko:K04564
KEGG Pathwayko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016
EggNOG free text desc.oxidoreductase activity, acting on superoxide radicals as acceptor
EggNOG OGsCOG0605@1,KOG0876@2759
EC1.15.1.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorysignal peptide
Exons6
Model size2102
Cds size684
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig15.2415.1prot_P-fluviatile_contig15.2415.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig15 847722..852871 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815649.4900055-UTR-P-fluviatile_contig15:846445..8477211622815649.4900055-UTR-P-fluviatile_contig15:846445..847721Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 846446..847721 -
1693562707.6779711-UTR-P-fluviatile_contig15:846445..8477211693562707.6779711-UTR-P-fluviatile_contig15:846445..847721Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 846446..847721 -
1622815649.594164-UTR-P-fluviatile_contig15:852871..8530131622815649.594164-UTR-P-fluviatile_contig15:852871..853013Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 852872..853013 -
1693562707.74431-UTR-P-fluviatile_contig15:852871..8530131693562707.74431-UTR-P-fluviatile_contig15:852871..853013Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 852872..853013 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815649.5100453-CDS-P-fluviatile_contig15:847721..8478131622815649.5100453-CDS-P-fluviatile_contig15:847721..847813Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 847722..847813 -
1693562707.688202-CDS-P-fluviatile_contig15:847721..8478131693562707.688202-CDS-P-fluviatile_contig15:847721..847813Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 847722..847813 -
1622815649.5284326-CDS-P-fluviatile_contig15:848647..8487711622815649.5284326-CDS-P-fluviatile_contig15:848647..848771Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 848648..848771 -
1693562707.6983285-CDS-P-fluviatile_contig15:848647..8487711693562707.6983285-CDS-P-fluviatile_contig15:848647..848771Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 848648..848771 -
1622815649.5419028-CDS-P-fluviatile_contig15:849473..8496681622815649.5419028-CDS-P-fluviatile_contig15:849473..849668Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 849474..849668 -
1693562707.7071424-CDS-P-fluviatile_contig15:849473..8496681693562707.7071424-CDS-P-fluviatile_contig15:849473..849668Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 849474..849668 -
1622815649.553394-CDS-P-fluviatile_contig15:850142..8502551622815649.553394-CDS-P-fluviatile_contig15:850142..850255Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 850143..850255 -
1693562707.7164805-CDS-P-fluviatile_contig15:850142..8502551693562707.7164805-CDS-P-fluviatile_contig15:850142..850255Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 850143..850255 -
1622815649.567164-CDS-P-fluviatile_contig15:850652..8506891622815649.567164-CDS-P-fluviatile_contig15:850652..850689Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 850653..850689 -
1693562707.7271419-CDS-P-fluviatile_contig15:850652..8506891693562707.7271419-CDS-P-fluviatile_contig15:850652..850689Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 850653..850689 -
1622815649.5817575-CDS-P-fluviatile_contig15:852748..8528711622815649.5817575-CDS-P-fluviatile_contig15:852748..852871Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 852749..852871 -
1693562707.73547-CDS-P-fluviatile_contig15:852748..8528711693562707.73547-CDS-P-fluviatile_contig15:852748..852871Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 852749..852871 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig15.2415.1

>prot_P-fluviatile_contig15.2415.1 ID=prot_P-fluviatile_contig15.2415.1|Name=mRNA_P-fluviatile_contig15.2415.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=228bp
MIRPSLTACVMFAVCSTIRGQVELPPLPYAQDALKEYISEETVSFHYGKH
HQGYVNNLNTFIEEDPSLAGLSLWRIMQKTKEGKVFNNAAQIYNHNLYWE
SLSPNGGGEPSGELYTAIVTAFGSYEKFKEAFTLLASGHFGSGWAWLTMH
EDGSVDVVDSHDASNPVVEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGW
WALVNWKYAEAEYARVMAKWGAKGKTD*
back to top

mRNA from alignment at P-fluviatile_contig15:846446..853013-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig15.2415.1 ID=mRNA_P-fluviatile_contig15.2415.1|Name=mRNA_P-fluviatile_contig15.2415.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6568bp|location=Sequence derived from alignment at P-fluviatile_contig15:846446..853013- (Porterinema fluviatile SAG_2381)
CCTCTGTCTGCCTCTCCTTCCCTTGCTTTCAACTGAGATTGTGTGCACCC
TCACAGACAACCCACCCAGCGGCACCTTTCCATCTCAACCAGCTCGGCCA
AAGCTCTCCCTCCGCAGGACTTGTGTCCACTCCCAGCGAAACATGATTCG
TCCCTCTTTGACTGCCTGTGTTATGTTCGCGGTCTGCTCCACGATCCGCG
GTCAAGTGGAGCTGCCTCCGCTACCGTACGCACAAGACGCCCTCAAGGAG
TACATCAGTGAGGAGGTAGGTTCTTCGTCTCGGCGCAACCGTTTGAGCGA
GAGGCTTTGCCTGCCAAACTCTTTGTGTACCATGCGTCCGCGGGTGACAT
GTGTCTTTTCGTGGTTTTTCGTGTTCTCATGACAGCGCGCTTTCAAGAGG
CGCTGCCGTTGCTGTGGCGTTCACAGGGCAATAGTTGAGCCAACGACAAT
CCATGGCCACTGGAGGTCATGTGCCGGGTTTGTGTAAGTGTCTGGTGGAC
AGTGGTACACGTGTTCAATGTCATCAAATGAGGGTGTACCACAGCGGACG
ATCTTGTTGCACACGCTCCAAAAAAATTTCGCGGTTCCACCTGGCGGTAT
TAACGGGGTCCTGGCTGTACGGTAGGTGCAGATGTTGCTCACGGCAAGCG
AGAGCTAGGCTGGAGATAAAATGACCGTTCGTGTAGATGAAGTCCCTGCC
GGGACGGATGGCGTATGGTCGAGCGAAAGTTCTCGCGAGATTATGGAGCC
CACGTTGGCCTAGGACAAAGTACAATCTAATCTATAGCCCGTAAATCGAT
ATTGATGTCGATTGACGTCTCAGGGCTTCGGTACTTTTGTACTTTTCGCT
GGAATACACACACAATACATCCATTCACTGGCGGGCGAACCTGGTCCCTT
CACAACTGCTGCTGCTGCCTTTGCTGTACATGAGCTGACCGAGTTTGATT
TAGGAGCCGAGGAGCCATTTTTTGCCTTTGGCGCTCAGGTGAAAGTCGCG
GGTATATGGCACAATCGCTCCGGTGGCGTAATTCAACGCGCGCGTTTTCA
CACGCCTCACCTTAATCAATCCAAGATTCGACTATCAGGCCTCCAACACA
CAATTCTTCCGCCTCCCAATGACGATGTCGCCGCCTTGGATAACACGCCT
CAAGAAAGGTATGGCCCGTCCAACCTTGAGGACCTTTCCTCTCCATGTCT
GTTTGCGCTGTCGCACATGATGTGTCTGCTCAGACCTCATTACTCCCCCC
CTTTACCCATGTGGTATGGTCCCGGTTCACCGTACCTTTTCGGCGAAATC
CCTGCTGTAACGACTGCATCTTCGTCGTGGCTCAGGGGTACCCTTACCCG
GCACCTCGACTGTATTTCGTATTTGTCCGCGGCTGGGGCACAAACTGCTG
TCGATAACTATTAGTTTTTAATTTGGTGGATGGGTCTCCCGCTTCATCCC
GCCCCTGTTCTCTCTTGACATGCGCATGTCACGGCGTTCACTAAATGGAA
GGTATTCGTAGAAATAAGGAAGGTAGCCTGCCTCACCACCGTTATTCACT
TGCACAAGGGTGTGCTTCGTGTAACCTTGTGCCTGCCTTGGCGAGCAGGC
ACTTCACGACACAAGTTTTTATCTGGTGATAGCATTTTGTTTTTGTATGG
AGGGCGTGCTGTCTGAAGGAGACCCGTCACTTGATCCTAGAATAGCATTA
TTTTCGGGCCTCATTCGGGCTCTTCAATCAGAGGGCCGGGTGTGCATTAT
TGTAGAGGGGTTCGTTCCCAAGCTGATACGTCGACTTCAGTCACATGCGG
TCAAGGCGCCGCACGAGTTTTGGTGCCAAGCAAGCGTTCCATGCGTCACT
GTGCCTTTTTCTACTTGTGGCTAACTTAACGATCGGAAAATTTAAGAGTC
TGTCGATCAGAAAGAAGCCGCCGATGCATGCATGGCCTGCCAGACCCTCT
CGACTTCTCACCAGTGGTTGATGTCGGCTCGATCTCGGCGTCCCGACCAC
TCTCTGCTTCCATCGCTTGGCCATCGCTGCGCGTTGTGCCGCACCGTGTG
CCATGTTTCACATCAGCCGATATATATGTATGTACGCACGACAAAGGTTG
TGAGAACTTAAGTGCTTGAATAATCTAGGGACGACAATGTGGGAGGAGAA
ATCAGAGCCGAAAACAAAAGCCCGTCAAAATCGATTGCAGCAGATCAGGT
CGTGCTTTGATCAGGTCGCGCTTACTTATCCGGCGCCCGCTTTTCTTCAC
GCCTCTTGCCCCCCCCCCTTCCGTTCGCGTCATGCCGCCCCTCCTTCCCA
CCGTACGTTTCGCTGCGCCTCCAGACCGTGAGCTTCCACTACGGAAAACA
CCATCAAGGCTGTGAGTAAAGTTATTTAATACGGAGTATATGTATATAGT
GCTGACTTCAGAGTACGGCGCAGGTGTTTTTTGCCTTCTGGTGCAAGTTT
CAAGACATCGACTTTTTGCTTCGTACTTGTTTGCCAGCGTAGTAAGGGTT
TGAAATATTCCCGATCGTGCGGGAAGCGCCAAGTGCTTCATTGGTTGGAC
AATAATGAGTTTTGAACGTGCTGCTCTTCTTCCTGTGAGAGTTTACCGTT
GTTGATGTGTTTGGTTTCTTTCTTCCCTTCTGATTCCCACTCTCAGATGC
TAATGAATTGCACGTTTTCAATCGAAAAGAGGCATGCGGCTCCCCTCCCC
CAGTATTTTCAAATCGTCCGTGCTGCCTCTCGGTTTTCATCCCCTTCATC
CTTCTCAGATGTGAACAACTTGAACACTTTCATCGAAGAAGACCCTTCGC
TGGCGGGACTTTCCTTGTGGAGGATCATGCAGAAGACGAAAGAGGGAAAG
GTTTTCAACAACGCGGCACAGGTGAGCTCCATTTGAGCACAGTTTCACGT
CGATGCAAGTATGCGCATGTTCACGGCTGTTAGATTCACGGCGCGATGAT
GTTCACTCCTTTCACTGTGAAATCGTATGGTCTTTGAGAGGTAATTGATA
GGAATGAACGCGGAGACTACAACAACAACTTTATCTGCTAGACGTCACCG
CGCATACCAGCAGCTGCCAAATTGACAACCCCTTCGTTGCGTCGTTCCCT
CGCAGAGTTTCATTGCAGCGGATTGAGAATAATCTCCGGTTCGAAACAAG
ATAAGGAAAAGCGTACCCGCATCGAGCAACCTGACCTTTACGCACTATCT
GCGGCAGGGGCACCCTCGAACCGTAGCCACTCGCCAAGGCCTCCCTCGAT
CGGCTCAACAAACCTTTTGAAGAAATGCCGCGCCTCAATCAACAAACGCA
AACCTTTTGAAGCAATACCGCGCCACAATCATAACCCGTGTCTAGATATA
TAACCACAACCTCTATTGGGAGTCCTTGTCCCCCAATGGCGGCGGAGAGC
CCTCCGGGGAGCTGTACACGGCGATCGTGACCGCGTTCGGCAGCTACGAA
AAATTCAAGGAGGCGTTCACCCTCCTGGCCTCCGGACACTTCGGATCCGG
CTGGGCTTGGCTCACAATGCACGAGGACGGCTCTGTGGATGTGAGATGAA
ATGAAATACCGACTGGAGCATGTATGACTTGATTTTAGTGAGAACTTGTT
ATTTCTGTGGACTCGGTTGCTAGAAAGTACGGACGAAAAATTGCCTGTTG
ATTGACGGTGCGAATAGTACAACGCGGTCACCACTTGGCACTTACTTGCG
TTTCAGAGAAGCTTCGTAAATATACTCGGCCGACCTACTCACCATCCACA
TGCCGTAGTCGCTAGTTTTGTGAATGAGTCATCTCTTACCTTTGCGCCCG
TCCGTCGCCGCCGGCCTCCCTCTCTCTGCCATGGTTCGGATACCGTTTCG
TCCACTTGCCCATTTTCCCGGTTGTTCCCTCTTCATTGACCATCGCTATC
GTCGCAATGCACTACCTTCTCCGAGATGGTTCCCCATCTTCGACTTTCTT
GGCATGCGTTCCGCCGGCCTCTTATGGCCAACCATTTCAACGACACAGTT
CACCATGTTTGACTCTCTTGGCATTCCTCTATTGGGGTCACTCCCTAGGC
GACTGACTTTCTCTCCGATTGAGATGCACTTGATCCGATCCCATGCTAAT
TTTAGCGTGGAATTTCCCCCCTTTCCAAGTATCAGTCAATCGCCTGGGGA
GTACACACCTACTTGGTTTGCCTCTTCGTCGCCTCTGATGTCACCAATTG
ATTGTTGCTCTGCTGCCTGCCATCCACACCGTGCCGTGTCAGGTGGTGGA
CTCGCACGACGCCTCGAACCCTGTCGTCGAAGGACTAGGCTTTCCGCTCC
TTGTCTGCGACGTTTGGGAGCACGCCTACTACCTCGACTACCAGAACCTG
AGGGCTAGCTATATAGGTGAGTCGGTTCGGGTCTGTTAGGTGAATTGGGT
CTGTTCGGCGAATCGCGTCTGTCCGGTGCAATATACTGTGGGGGGGGAGG
GGGGGGCGTATAGTGCGGCTTGAATAATCCGTGTGCCCGATATGGTGCGG
GGAATCGTTTGGTACAAAAGCTCTCTCATAACAAAATATATACATCAACC
ACTGGTGAACAGTGCGGATGCCAGAGTTAGTGCCCATTAAAGCTGCCCTT
CCCAACCCCACACTTCTAGGGTCCCCCACTGTACGTACTTTGCATGTGTA
ATCGGGTCTATTCGATCAATCGGATGCGACAAAGATAGCTCTGTACGCGT
TCAAGGGTAAGTTGATTCGAGCATCGTGCTTGTATCGAGTGCGTCGGCGA
GTTGAGTCAGAAAATCTGCTTGCTTTACTTGTTGAGGGATCTCCGGCACC
GCACTTTTTTCAGGATTTCGTCCATTCTCGACAACAACACCGGGATGCAG
TTTAAGGCAAGAGTTCGATCGGAATCCGCGACTTACTTTCCACGGAATTT
CAACATTTCCCTCTCTATTTCGTGTTTGCGTTTATCTTCCTCCTCGTGTG
CGCGCGCACTCGCCTATTGCGAAACGCCCGAATGCCGCAACCGATGTCGC
CTTGCATGTGTTTGCCTTGCCCCGACAGGCCCGGCCTGGCCTCGTCTCGC
CTCATTTCGCGTCGACACAAGGAACGAAGCTCCCTCCCTGAGAAGTTGCT
TTGATAACGTTTCGCCGCTATTGGGGGCGCATGTCTTGACCGACCTTACA
TTGCCTTGCCTTGCGTTTTCTTACGTTGCCTCTCCTCGCCTGATGCGCAG
AGGGCTGGTGGGCGCTGGTGAACTGGAAATACGCCGAGGCTGAATACGCT
CGCGTCATGGCGAAGTGGGGCGCGAAGGGAAAGACGGATTGAGTTCTTTT
TTTCCTTTAATGGGAGGAATTTGATCATTAAAGATCAACTCCCGATGACT
TTCACCTTCGCGTCATGGGTGCGCTGGCCAGCGCATCAAATAAAAGCCGG
GCAGAACGGCCAAGAGTTTGCGTATGTTTGTTCCGAAAATCGAAAGGCGG
ATTGCCGGAAGCCGGTTCTTCCTTTGTGTGTGTGTCTGTTAGCGCAAACC
GCGCGAAACGGCTGATCAGAGAAAAGACGCCAGGCTCAGCGAGGTGAAAG
GCAAGAACACCTCCAACACATCGTTGCCCTCCTGTGGAAGGTTTGCTGGT
GATGGTCTACGACACGGTTTGTGTGTGTTTGTTCGTACTTCTTGTTTTTG
TTTTTTTTGTTGTTTTCCTGGCTGTGCGTACCAAAGCAGCCGCAACGAGC
TGGCACTGCACGCTCTTCCGGCTGAGCTTCATAACCGCATGCGCACTCGC
TGATTTCGGATACTTCCGAAGTTCTTCAGTTGTGTTTCGTGGACGCTACA
CGCCCTTTCTCTCCACCAAATGAGTTCGTTCTGTGGTGGTGCGTCAATCC
GAGCGTCCGTGTGCACCTTGGAAGGGAGGCCAGTTTGTGCCTGAATTGTT
GATGCAGGAGAAGCATTGCTTTGGACAGGCATGTATGTTTTTACGTGTAA
AAAGCCATGCCCAAGGGTTCTTTGTTCATGTGGTTAAATTACGTGATATG
TTTGTGGGTGTAGTGCGATGATGATCTGCAATTTACACGCGTGGGAGTGG
ATAGATTTGGCGGAAAATCTTATGACCATCGCTTGCTTTGGCTTTCGATG
TGGCAACGACCTCGCGACCATTTCTTGATGTGTACGGTCAGTTTTTGTTA
ACACTGCGGCTTCTGGAATATCTAGAGAAGGGATCGAGCGCGTGGACCTT
CGACTCTTGGTCAGTGTTACGATGCCCTTCTTTACTCCTTCCCCCAGTGC
AAGTTGCGGGGAGATCAGGTTCGAGGAGACCAATCAAGACGAGAGGCCTA
CCTGTTGATTTCGGCGAAGTTGACGGGAGCGTTTGTCGGACGCCGAGGTT
GCTGACGGCAGGAGAATGGCGTTACAGTATTTTTCATTTTCCTCGCCCCT
TGTAATCCTGCGGCGATTTGATTTTCGGGTTGTCTCTGCGTCACCACCCC
CGGTGTTTACTTCATGTCTCGGGCTGGAACGGCGACGTAGTGTTTTCTTG
CGGTGTGTGCAATGAACCAAAAAAATGACGAAATAAATACAACATTTAAA
CCTCCTGGTAAAGGACCC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig15:846446..853013-

>mRNA_P-fluviatile_contig15.2415.1 ID=mRNA_P-fluviatile_contig15.2415.1|Name=mRNA_P-fluviatile_contig15.2415.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1368bp|location=Sequence derived from alignment at P-fluviatile_contig15:846446..853013- (Porterinema fluviatile SAG_2381)
ATGATTCGTCCCTCTTTGACTGCCTGTGTTATGTTCGCGGTCTGCTCCAC
GATCCGCGGTCAAGTGGAGCTGCCTCCGCTACCGTACGCACAAGACGCCC
TCAAGGAGTACATCAGTGAGGAGATGATTCGTCCCTCTTTGACTGCCTGT
GTTATGTTCGCGGTCTGCTCCACGATCCGCGGTCAAGTGGAGCTGCCTCC
GCTACCGTACGCACAAGACGCCCTCAAGGAGTACATCAGTGAGGAGACCG
TGAGCTTCCACTACGGAAAACACCATCAAGGCTACCGTGAGCTTCCACTA
CGGAAAACACCATCAAGGCTATGTGAACAACTTGAACACTTTCATCGAAG
AAGACCCTTCGCTGGCGGGACTTTCCTTGTGGAGGATCATGCAGAAGACG
AAAGAGGGAAAGGTTTTCAACAACGCGGCACAGATGTGAACAACTTGAAC
ACTTTCATCGAAGAAGACCCTTCGCTGGCGGGACTTTCCTTGTGGAGGAT
CATGCAGAAGACGAAAGAGGGAAAGGTTTTCAACAACGCGGCACAGATAT
ATAACCACAACCTCTATTGGGAGTCCTTGTCCCCCAATGGCGGCGGAGAG
CCCTCCGGGGAGCTGTACACGGCGATCGTGACCGCGTTCGGCAGCTACGA
AAAATTCAAGGAGGCGTTCACCCTCCTGGCCTCCGGACACTTCGGATCCG
GCTGGGCTTGGCTCACAATGCACGAGGACGGCTCTGTGGATATATATAAC
CACAACCTCTATTGGGAGTCCTTGTCCCCCAATGGCGGCGGAGAGCCCTC
CGGGGAGCTGTACACGGCGATCGTGACCGCGTTCGGCAGCTACGAAAAAT
TCAAGGAGGCGTTCACCCTCCTGGCCTCCGGACACTTCGGATCCGGCTGG
GCTTGGCTCACAATGCACGAGGACGGCTCTGTGGATGTGGTGGACTCGCA
CGACGCCTCGAACCCTGTCGTCGAAGGACTAGGCTTTCCGCTCCTTGTCT
GCGACGTTTGGGAGCACGCCTACTACCTCGACTACCAGAACCTGAGGGCT
AGCTATATAGGTGGTGGACTCGCACGACGCCTCGAACCCTGTCGTCGAAG
GACTAGGCTTTCCGCTCCTTGTCTGCGACGTTTGGGAGCACGCCTACTAC
CTCGACTACCAGAACCTGAGGGCTAGCTATATAGAGGGCTGGTGGGCGCT
GGTGAACTGGAAATACGCCGAGGCTGAATACGCTCGCGTCATGGCGAAGT
GGGGCGCGAAGGGAAAGACGGATTGAAGGGCTGGTGGGCGCTGGTGAACT
GGAAATACGCCGAGGCTGAATACGCTCGCGTCATGGCGAAGTGGGGCGCG
AAGGGAAAGACGGATTGA
back to top