mRNA_P-fluviatile_contig15.2411.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig15.2411.1 vs. uniprot
Match: A0A6H5JY66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY66_9PHAE) HSP 1 Score: 868 bits (2242), Expect = 1.590e-293 Identity = 534/937 (56.99%), Postives = 609/937 (64.99%), Query Frame = 2
Query: 395 VVVTGGHGYMPGTYIEEGERNGANLYISEDRSTELFYTERSNNDXXXXXXXXXXXSLLSRLDEGLFPDDAADEDER-----EG----RRALGACTSGFWSLAAAGGGYPRLVVDDCASHPADIKVTTWSEVTCPDCTEQTYNGDMPVVTCSSDNTIPSPSPXXXXXXXXXXTDPAAPPAAQ---SGERGGL-----IAYAAGMRSSHSCKVLRVGGRFAGLYTVAGTYNGRGDYYSENQQHNIFFEATAPAXXXXXXXXXXXXXXRRR------------VLAGPSGERSWNRKNGRELAACTEGYWVKTLTGGGYPFFAVADCAVQPEDIPPSADWMAVTCESCDPVAAPSAQGIACATGQNAIVETPSPVPPVQAGTQVAQTLPAAGPSTCEKVTITGARSGAYTVAGSTNGAADLYSDDGKWRMFFAGPAPALVNNNDDRGRRLSVAAATEAVAWGDAAVGLA------EGHRRLQDCQGYWYITPAEDTRYPAMAVSDCAGHPADIFATDWLLIECEECEVTTPQLKPVASCTGAPPNAKRGASLATPSPAAED----ASXXXXXXXXASSTCEDLILTGDFPGNYTARGTYRGKPDFYNDDGTVNLYFELATSRRRSLSA---ERYSGXXXXXXXXXEESFLPGEVMVSALEAYG---GASRRLAMCSSGYWVLARVEGNGYPVLGVPDCADHPADIRASTWLVAACATCGVQEAPSFVAPTITCTTAEGSTAGGGAGGTVAPSPLLPSSCSTVYVTGPPAGVYRQRGVYGGNRGDFFSVSGAWNMYWTFYAGKPVNR--FRRGLVALPDSADGGERMAEDRWSEEYERALQTLVDELRDRAAAAAVGGPVGDGEERQRRLEACDNGFWLITPRGGGFPFYGTLNCADHPADIAGSALWRAVECDGCGSTPVEAA-SLAVXXXXXXFTPPPS 3061
V+VTGG+GY PG Y EEG RNG +LYISEDRS ELF++ER XXXXXXXXXXX L P D D+ E+ EG +R LGACTSGFWSLA AG GYPRL V DCASHPADIKVT WSEVTC C EQ +NG +P V C+SDN++ +PSP XXXXX GE G +A A + SCKV+ V GR+ GLYTVAG+YN RGD+YS + HNIF XXXXXXXXXXXXXX +L G GERS + GR LAAC+ GYW+K TGGGYP FAVADCA PE+I S+ WM VTCE C A S+Q I CATG +A V TPSPV PV AG TLP AGPSTCE VT+TG R+G YTV GS NGAAD+YSDDG WRMFFA PAPAL R R S+ + + G + LA R LQ C GYWYITP +D RYPA AV DC HP DI ++DWL ++CE+CEV T KP ASCTGAP N KRG S TP+P D AS+TC +L +TG+FPGNYTA GTYRGK DF+NDDGTVNLYFELA S RR LS+ ER G LPGE+M SALE ASRRLA+C+SGYW++ +V G+GYPVLGVPDCADHP DIRA+TWLVA+C +CGVQEAPSFVAPTI C A G+ G T PSP LP+ C TVYVTGP AGVY Q+G YG RGDFFS + AWNMYWTFYAGKPVNR FRRGL ++P+ G ER WSEEYE ALQTL D+L R A G D R R+LE CD+GFWLITPRGGGFPFYGTLNCADHPADI+ A W VECDGCGS P++ ++ + FTPPPS
Sbjct: 17 VLVTGGYGYTPGVYFEEGTRNGGSLYISEDRSAELFFSERXXXXXXXXXXXXXXXXXXXXX---LLPQDMLDDSEKAVSVGEGGSAAKRRLGACTSGFWSLAPAGSGYPRLTVGDCASHPADIKVTAWSEVTCEGCEEQAFNGAVPAVACTSDNSLATPSPSAASTXXXXXXXXXXXXXXXXXXGGEVGAQQTPSPVASAPEIVVDDSCKVIDVVGRYPGLYTVAGSYNERGDFYSADGGHNIFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLRGLFGERSAQQATGRNLAACSNGYWIKMPTGGGYPLFAVADCAAYPEEIASSSTWMIVTCEGCVGTEATSSQTITCATGADAFVATPSPVSPVVAGGGETITLPGAGPSTCEAVTVTGPRAGGYTVGGSINGAADVYSDDGLWRMFFASPAPAL-----SRRARRSLHFSADGGDAGPLSAELAPDTRDTHDRRGLQTCDGYWYITPVDD-RYPAYAVMDCGEHPVDIVSSDWLYLDCEDCEVVTADSKPDASCTGAPANIKRGGSFNTPAPVVLDFVGTPGPDTSSSGSASTTCTELYVTGEFPGNYTANGTYRGKLDFFNDDGTVNLYFELADSSRRLLSSAGEEREGG----------RRLLPGELMASALEERYHALAASRRLAICTSGYWIITQVAGDGYPVLGVPDCADHPVDIRANTWLVASCESCGVQEAPSFVAPTIAC--ASGAAGXXXXGAT--PSPALPAICGTVYVTGPAAGVYVQQGDYG-TRGDFFSGNNAWNMYWTFYAGKPVNRNRFRRGL-SVPEDRAGSER-----WSEEYELALQTLADDLFRRKEA----GRSADWNGR-RKLEVCDDGFWLITPRGGGFPFYGTLNCADHPADISNLAAWSVVECDGCGSEPLDGTVTVTISCDGADFTPPPS 918
BLAST of mRNA_P-fluviatile_contig15.2411.1 vs. uniprot
Match: D7G5Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q9_ECTSI) HSP 1 Score: 624 bits (1609), Expect = 4.820e-203 Identity = 382/658 (58.05%), Postives = 435/658 (66.11%), Query Frame = 2
Query: 629 RRALGACTSGFWSLAAAGGGYPRLVVDDCASHPADIKVTTWSEVTCPDCTEQTYNGDMPVVTCSSDNTIPSPSPXXXXXXXXXXTDPAAPPAAQ---SGERGGL-----IAYAAGMRSSHSCKVLRVGGRFAGLYTVAGTYNGRGDYYSENQQHNIFFEATAPAXXXXXXXXXXXXXX------------RRRVLAGPSGERSWNRKNGRELAACTEGYWVKTLTGGGYPFFAVADCAVQPEDIPPSADWMAVTCESCDPVAAPSAQGIACATGQNAIVETPSPVPPVQAGTQVAQTLPAAGPSTCEKVTITGARSGAYTVAGSTNGAADLYSDDGKWRMFFAGPAPALVNNNDDRGRRLSVAAATEAVAWGDA-------AVGLAEGHRR--LQDCQGYWYITPAEDTRYPAMAVSDCAGHPADIFATDWLLIECEECEVTTPQLKPVASCTGAPPNAKRGASLATPSPAAED----ASXXXXXXXXASSTCEDLILTGDFPGNYTARGTYRGKPDFYNDDGTVNLYFELATSRRRSLSA--ERYSGXXXXXXXXXEESFLPGEVMVSALEAY---GGASRRLAMCSSGYWVLARVEGNGYPVLGVPDCADHPADIRASTWLVAACATCGVQEAPSFVAPTITCTTAEGSTAGGGAG 2488
RR LGACTSGFWSLA AG GYPRL V DCASHPADIKVT W EVTC C EQ +NG +P V C+SD++ +PSP XXXXXXXX GE G +A A + SCKV+ VGGR+ GLYTVAG+YN RGD+YS + HNIFFEA++ XXXXXXXX XXXXX RRRVL G GERS + GR LAAC+ GYW+K TGGGYPFFAVADCA PE+I S+ WM VTCE C A SAQ I CATG +A V TPSPV PV AG + TLP AGPSTCE +T+TG R+G YTV GS NGAAD YSDDG WRMFFA PA AL R R S+ + E GDA A + H R LQ C GYWYITP +D RYPA AV DC HP DI ++DWL ++CE+CEV T KP ASCTGAP N KRG S TP+P A D +S+TC +L +TGDFPGNYTA GTYRG+ DF++DDGT NLYFELA S RR LS+ E G E LPGEVM SALE ASRRLA+C+SGYW++ +V G+GYPVLG PDCADHP DIR +TWLVA+C +CGVQEAPSFVAPTITC A G+ AGGGAG
Sbjct: 34 RRRLGACTSGFWSLAPAGSGYPRLTVGDCASHPADIKVTAWLEVTCEGCEEQAFNGAVPAVACASDDSPATPSPSAXXXXXXXXXXXXXXXXXXXXXGGEVGAQQTPSPVASAPEIIVDDSCKVVDVGGRYPGLYTVAGSYNERGDFYSADGGHNIFFEASSAXXXXXXXXXFXXXXXXXXXXXXXXGDRRRRVLRGLFGERSGQQATGRNLAACSNGYWIKMPTGGGYPFFAVADCAAYPEEIASSSAWMIVTCEGCVGTEATSAQAITCATGTDAFVATPSPVSPVVAGGEETVTLPGAGPSTCEAITVTGPRAGGYTVEGSINGAADAYSDDGLWRMFFAPPASAL-----SRRARRSLYFSAEG---GDAVPLSTELAPDTRDTHDRRGLQTCDGYWYITPVDD-RYPAYAVMDCGEHPVDIVSSDWLYLDCEDCEVVTADSKPDASCTGAPANLKRGGSFNTPAPVALDFVGTPGPGSSSSGSSSTTCTELYVTGDFPGNYTANGTYRGRLDFFSDDGTFNLYFELADSSRRLLSSADEEREG---------ERRLLPGEVMASALEERYHAWAASRRLAICTSGYWIITQVAGDGYPVLGAPDCADHPVDIRTNTWLVASCESCGVQEAPSFVAPTITC--ASGA-AGGGAG 670 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2411.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig15.2411.1 >prot_P-fluviatile_contig15.2411.1 ID=prot_P-fluviatile_contig15.2411.1|Name=mRNA_P-fluviatile_contig15.2411.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=998bp MTAGRACRRAFAAYAAAVMLGRNCASAAVTGKAPAVRGRESTRRLASCGTback to top mRNA from alignment at P-fluviatile_contig15:797523..816237- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig15.2411.1 ID=mRNA_P-fluviatile_contig15.2411.1|Name=mRNA_P-fluviatile_contig15.2411.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=18715bp|location=Sequence derived from alignment at P-fluviatile_contig15:797523..816237- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig15:797523..816237- >mRNA_P-fluviatile_contig15.2411.1 ID=mRNA_P-fluviatile_contig15.2411.1|Name=mRNA_P-fluviatile_contig15.2411.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5988bp|location=Sequence derived from alignment at P-fluviatile_contig15:797523..816237- (Porterinema fluviatile SAG_2381)back to top |