mRNA_P-fluviatile_contig15.2409.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig15.2409.1 vs. uniprot
Match: A0A6H5JMR3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR3_9PHAE) HSP 1 Score: 382 bits (981), Expect = 1.750e-133 Identity = 186/194 (95.88%), Postives = 189/194 (97.42%), Query Frame = 1
Query: 100 MWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETSELGQGLRC 681
MWGIFALFGVLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDETSE+ LRC
Sbjct: 1 MWGIFALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETSEVPAALRC 194
BLAST of mRNA_P-fluviatile_contig15.2409.1 vs. uniprot
Match: A0A6H5JH77_9PHAE (S5A_REDUCTASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH77_9PHAE) HSP 1 Score: 369 bits (947), Expect = 2.730e-123 Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 1
Query: 100 MWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDET 654
MWGIFA FGVLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDET
Sbjct: 1 MWGIFAPFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDET 185
BLAST of mRNA_P-fluviatile_contig15.2409.1 vs. uniprot
Match: A0A6H5L1T0_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T0_9PHAE) HSP 1 Score: 377 bits (968), Expect = 3.390e-123 Identity = 184/193 (95.34%), Postives = 187/193 (96.89%), Query Frame = 1
Query: 100 MWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETSELGQGLR 678
MWGIFALFGVLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDETS QG +
Sbjct: 1 MWGIFALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETSSTPQGTK 193
BLAST of mRNA_P-fluviatile_contig15.2409.1 vs. uniprot
Match: A0A6H5KQE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE4_9PHAE) HSP 1 Score: 372 bits (955), Expect = 2.470e-122 Identity = 181/186 (97.31%), Postives = 184/186 (98.92%), Query Frame = 1
Query: 100 MWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETS 657
MWGIFALFGVLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDET+
Sbjct: 1 MWGIFALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETT 186
BLAST of mRNA_P-fluviatile_contig15.2409.1 vs. uniprot
Match: A0A6H5LAK0_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAK0_9PHAE) HSP 1 Score: 346 bits (888), Expect = 5.060e-119 Identity = 168/178 (94.38%), Postives = 171/178 (96.07%), Query Frame = 1
Query: 148 RTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETSELGQGLRC 681
R DPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDETSE+ LRC
Sbjct: 32 RVNQDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETSEVPAALRC 209
BLAST of mRNA_P-fluviatile_contig15.2409.1 vs. uniprot
Match: A0A6H5JUK8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK8_9PHAE) HSP 1 Score: 343 bits (879), Expect = 1.120e-112 Identity = 168/197 (85.28%), Postives = 178/197 (90.36%), Query Frame = 1
Query: 76 AHPSPTPLMWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETSELG 666
A PSPTPLMWGIFALFGVLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAA+TYGLPLASLHDRVK KVAIDA+VGPGTVLSKE EDFVEDVLIYASRHFLLLGRREL+DAVRN+CSDGRKVPW+PDKGPGDSWLEG M RHPGLSERATHI EAN INED E RL+AFY AWAEYL ETKLPPE + ++ +G
Sbjct: 31 AQPSPTPLMWGIFALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAAKTYGLPLASLHDRVKKKVAIDAKVGPGTVLSKEGEDFVEDVLIYASRHFLLLGRRELKDAVRNICSDGRKVPWNPDKGPGDSWLEGVMTRHPGLSERATHINEANPINEDDERRLEAFYKAWAEYLAETKLPPEXVSAVSVSTAVG 227
BLAST of mRNA_P-fluviatile_contig15.2409.1 vs. uniprot
Match: A0A6H5JPC4_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPC4_9PHAE) HSP 1 Score: 284 bits (726), Expect = 8.500e-95 Identity = 139/186 (74.73%), Postives = 155/186 (83.33%), Query Frame = 1
Query: 100 MWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETS 657
M G+FA+ G+LL SMGRTRVDPEQAQKAVDAVRSG+MS+R AA YGL SLH R+ NKVAIDA+V PGTVLSKEEE+FVEDVL+YASR LLLGRREL+DAVR +C DGRKV WDPDKGPGD WL+ F+ RHP L ERATHIYEANRINED E RL+AFY W YL ETKL +RI+NTDETS
Sbjct: 1 MRGVFAIVGLLLPSMGRTRVDPEQAQKAVDAVRSGQMSVRGAAEAYGLSRNSLHSRLTNKVAIDAKVAPGTVLSKEEEEFVEDVLVYASRRLLLLGRRELKDAVRKICLDGRKVRWDPDKGPGDRWLQWFLKRHPELPERATHIYEANRINEDDESRLEAFYETWDAYLSETKLTSDRIMNTDETS 186
BLAST of mRNA_P-fluviatile_contig15.2409.1 vs. uniprot
Match: A0A6H5L2N3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2N3_9PHAE) HSP 1 Score: 274 bits (701), Expect = 1.050e-91 Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 1
Query: 100 MWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPG 507
MWGIFALFGVLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPG
Sbjct: 1 MWGIFALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPG 136
BLAST of mRNA_P-fluviatile_contig15.2409.1 vs. uniprot
Match: A0A6H5K5E3_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5E3_9PHAE) HSP 1 Score: 274 bits (700), Expect = 5.250e-89 Identity = 159/277 (57.40%), Postives = 168/277 (60.65%), Query Frame = 1
Query: 58 KHSRDTAHPSPTPLM---WGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEG-------------------------------------------------------------------------FMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETSE 660
K+S H L+ WG A G R RVDPEQAQK VDAVRSG+MSLRVAA+TY LPLASLHDRVK +VAIDA VGPGTVLSKEEE FVEDVLIYASRHFLL GRREL+ AVRN+CSDGRKVPW+P KGPGDSWLEG FMARHPGLSERATHIYEANRINED EPRL+AFY A AEYL ETKLPPERILNTDETSE
Sbjct: 40 KYSTALTHTPDVGLLCPFWGPAAKHGTY---ESRPRVDPEQAQKTVDAVRSGQMSLRVAAKTYRLPLASLHDRVKKEVAIDASVGPGTVLSKEEEGFVEDVLIYASRHFLLSGRRELKYAVRNICSDGRKVPWNPAKGPGDSWLEGXKKEVAIDASVGPGTVLSKEEEGFVEDVLIYASRHFLLSGRRELKYAVRNICSDGRKVPWNPAKGPGDSWLEGFMARHPGLSERATHIYEANRINEDDEPRLEAFYKARAEYLAETKLPPERILNTDETSE 313
BLAST of mRNA_P-fluviatile_contig15.2409.1 vs. uniprot
Match: A0A6H5KK08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK08_9PHAE) HSP 1 Score: 263 bits (672), Expect = 1.600e-83 Identity = 130/175 (74.29%), Postives = 143/175 (81.71%), Query Frame = 1
Query: 142 MGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETSELG 666
MGR RVDPE+AQKA+DAVRSGEMS RVAA TYGL SLH RVK +VAIDARVGPGTVL KEEEDFVEDVL++A RHFLLLGR EL++AVR +C DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHI EANRINED EPRL+AFY W L ET + + +T+ L
Sbjct: 1 MGRARVDPERAQKAIDAVRSGEMSFRVAADTYGLNPTSLHRRVKKEVAIDARVGPGTVLCKEEEDFVEDVLMHAFRHFLLLGRGELKEAVRKICLDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHICEANRINEDDEPRLEAFYETWEACLAETSSRRXKQTGSTKTTSLA 175 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig15.2409.1 >prot_P-fluviatile_contig15.2409.1 ID=prot_P-fluviatile_contig15.2409.1|Name=mRNA_P-fluviatile_contig15.2409.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=196bp MWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLback to top mRNA from alignment at P-fluviatile_contig15:781469..782155+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig15.2409.1 ID=mRNA_P-fluviatile_contig15.2409.1|Name=mRNA_P-fluviatile_contig15.2409.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=687bp|location=Sequence derived from alignment at P-fluviatile_contig15:781469..782155+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig15:781469..782155+ >mRNA_P-fluviatile_contig15.2409.1 ID=mRNA_P-fluviatile_contig15.2409.1|Name=mRNA_P-fluviatile_contig15.2409.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1176bp|location=Sequence derived from alignment at P-fluviatile_contig15:781469..782155+ (Porterinema fluviatile SAG_2381)back to top |