mRNA_P-fluviatile_contig15.2402.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig15.2402.1 vs. uniprot
Match: A0A835YQG9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG9_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.630e-20 Identity = 81/231 (35.06%), Postives = 104/231 (45.02%), Query Frame = 1
Query: 805 ACRAEGKRILDWSVKVFLQPRAVVDLQRVWRGHRARKRMAAYVQWLENRARRRREYQRYLAALAARRAAAWRNDEQVK----RRVWGRVEFAHTGWRPRYEAD---DPPDMHDHVWTPPRGSSSGVRTLKVLLPPATERDRLTLTGDKNAWAGVPVGITDRKPRPERFGPSPRPGTITA-APXXXAEGARGRGRAPPLSPVGVRVGGSGETEGG-VLTRYNWIPATLVGKA 1470
AC A+ ++ V+ L+P A D+QRV+RGHRAR R+ RR WGR F HTGWRP+ A ++ H PPR +++G+R V LPP TE D L GD W GVPV RK +P GP PRPGT A +P A GRG A GG+GE G +T+Y W+PA+L+ A
Sbjct: 124 ACAAQVAALVRGGVQRALRPAAARDVQRVFRGHRARARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRRAWGRAAFVHTGWRPQRGAAAAWSAAELEAHAAAPPRATAAGLRVSCVTLPPRTEWDLKLLAGDGAVWVGVPVATAPRKCKPPPLGPPPRPGTAGAWSPPRLA----GRGEA----------GGAGEGGGHQFVTKYTWLPASLLAGA 340 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig15.2402.1 >prot_P-fluviatile_contig15.2402.1 ID=prot_P-fluviatile_contig15.2402.1|Name=mRNA_P-fluviatile_contig15.2402.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=490bp MRFCGVGAIEAQIAAGGYGDGGSNRDDSVVVTGKGDRQRGGNQTVRAKERback to top mRNA from alignment at P-fluviatile_contig15:695719..708778- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig15.2402.1 ID=mRNA_P-fluviatile_contig15.2402.1|Name=mRNA_P-fluviatile_contig15.2402.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=13060bp|location=Sequence derived from alignment at P-fluviatile_contig15:695719..708778- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig15:695719..708778- >mRNA_P-fluviatile_contig15.2402.1 ID=mRNA_P-fluviatile_contig15.2402.1|Name=mRNA_P-fluviatile_contig15.2402.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2940bp|location=Sequence derived from alignment at P-fluviatile_contig15:695719..708778- (Porterinema fluviatile SAG_2381)back to top |