mRNA_P-fluviatile_contig15.2401.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig15.2401.1 vs. uniprot
Match: D7G5P3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5P3_ECTSI) HSP 1 Score: 311 bits (797), Expect = 1.580e-85 Identity = 204/371 (54.99%), Postives = 241/371 (64.96%), Query Frame = 1
Query: 490 TAQQPPSFSSTFGAESLGRTSEDSQPSNTAPDGNRGGANCETNPFASRGRGGGRGGEAHAV--------GATPPAAEALSSQHFGLRRWKEYAVLRHGNNRRFVESQHGREILAETAAKIRTKEVEDLNRELKEMRALVEELHGALRAEQVEKSNLQARVLLLEREIEEMDSARRRWLKEGASNRSRGSNLERRLAGNTGTLRAYLFGADPKSEM-QKLAMTDPSSRTSGAKASAGSXXXXXXXXXXXXXXXXXXGADCATTPEGLPRKREQHEGEGAMLSAATAAEASAVRRAKETAELEKSEMRRRHQVELAAKQSRIEKLKLEIRKLEAERDGFKQAAENQAGLFKDGYAELKACVEQMKTCQPPPPP 1575
T+QQ S SS FG+ S RTSE+ Q ++ ++ S G + G A + G A +LS Q +GL RWKEYAVLRHG N+RFV SQHGREIL ETA+ IRTKEV DLNRELKEMRALV+ELH AL AEQVEKSNLQA+++LLERE+E MD ARRRWL+E ASNR RGSNLERRLAGNTG LR +LFGAD K E ++LA D S + SA G A T E+ + + A + TA E +AVRRA+ETAELE+SE+RRRH VE+ AKQSRIE+LKLE+R+LEAERDG KQAAE Q GLFKDGYAELK C+E+MK PPP
Sbjct: 205 TSQQRLSLSSIFGSASERRTSENKQ------------SDARSSMLVSENEGAVKRGIARSAFLEGRNEGGDGSNAGASLSPQTYGLHRWKEYAVLRHGGNKRFVNSQHGREILVETASTIRTKEVADLNRELKEMRALVQELHSALHAEQVEKSNLQAKIVLLEREVEGMDFARRRWLRENASNRGRGSNLERRLAGNTGNLRTFLFGADAKPEATRQLATRDASEAPGTFRPSA------TCSGSPVASSRAHSGVGGAATTASEMSTGEEGDRDMAAIGGTTA-ERNAVRRARETAELERSELRRRHDVEMTAKQSRIERLKLEVRRLEAERDGLKQAAETQVGLFKDGYAELKTCLEEMKAHGQSPPP 556
BLAST of mRNA_P-fluviatile_contig15.2401.1 vs. uniprot
Match: A0A6H5KE49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE49_9PHAE) HSP 1 Score: 241 bits (616), Expect = 4.530e-62 Identity = 195/433 (45.03%), Postives = 227/433 (52.42%), Query Frame = 1
Query: 493 AQQPPSFSSTFGAESLGRTSEDSQP---SNTAPDGNRGGANCETNPFASRGRGGGRGGEAHAVGATPPAAEALSSQHFGLRRWKEYAVLR--------HGNNRRFVESQHGREILAETAAKIRTKEVE---------------------------------------------------DLNRELKEMRALVEELHGALRAEQVEKSNLQARVLLLEREIEEMDSARRRWLKEGASNRSRGSNLERRLAGNTGTLRAYLFGADPKSEMQKLAMTDPSSRTSGAKASAGSXXXXXXXXXXXXXXXXXXGADCATTPEGLPRKREQHEGEGAMLSAATAAEASAVRRAKETAELEKSEMRRRHQV---------ELAAKQSRIEKLKLEIRKLEAERDGFKQAAENQAGLFKDGYAELKACVEQMKTCQPPPPPA 1578
+QQ S S TFG+ S RTSE Q S+ N G +C FA G GG+ GA+ +S Q +GL RWKEYAVLR HG N+RFV SQHGREIL ETA+ IRTKEV DLNRELKEMR LV+ELH AL AEQVEKSNLQA+++LLEREIE MD ARRRWL+E ASNR RGSNLERRLAGNTG LR +LFGAD K E +LA D S + S C+ +P R H G G +AATA+E S E E + + + +++AKQSRIE+LKLE+RKLEAERDG KQAAE Q GLFKDGYAELK C+E+MK PPPA
Sbjct: 141 SQQRLSLSPTFGSASERRTSEKKQSDTRSSMLVSENEGVVHCGKARFAFL-EGMNEGGDGSNAGAS------VSPQTYGLHRWKEYAVLRQGTPWLVRHGGNKRFVNSQHGREILFETASTIRTKEVREGNTQARLCRHIALRARIRMEQRGTRFPSKLHRFPQASVGPTCLLRSHEVADLNRELKEMRGLVQELHSALHAEQVEKSNLQAKIVLLEREIEGMDFARRRWLRENASNRGRGSNLERRLAGNTGNLRTFLFGADAKPEATRLATRDASRAPGTFRPST----------------------TCSGSPVASSRT---HSGVGG--AAATASEMSTG----EEGERDMAAIGDHPDFLSASSLLVPQMSAKQSRIERLKLEVRKLEAERDGLKQAAEIQVGLFKDGYAELKTCLEEMKAHGQSPPPA 535 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig15.2401.1 >prot_P-fluviatile_contig15.2401.1 ID=prot_P-fluviatile_contig15.2401.1|Name=mRNA_P-fluviatile_contig15.2401.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=820bp MRAGAILGDRWTSRRRSLSAPQKAYPFIGGPVAGGAVAGGPVTADTHLDSback to top mRNA from alignment at P-fluviatile_contig15:685592..695762+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig15.2401.1 ID=mRNA_P-fluviatile_contig15.2401.1|Name=mRNA_P-fluviatile_contig15.2401.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10171bp|location=Sequence derived from alignment at P-fluviatile_contig15:685592..695762+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig15:685592..695762+ >mRNA_P-fluviatile_contig15.2401.1 ID=mRNA_P-fluviatile_contig15.2401.1|Name=mRNA_P-fluviatile_contig15.2401.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4920bp|location=Sequence derived from alignment at P-fluviatile_contig15:685592..695762+ (Porterinema fluviatile SAG_2381)back to top |