mRNA_P-fluviatile_contig15.2391.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig15.2391.1 vs. uniprot
Match: D7FJ86_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ86_ECTSI) HSP 1 Score: 112 bits (280), Expect = 2.230e-26 Identity = 50/73 (68.49%), Postives = 57/73 (78.08%), Query Frame = -1
Query: 10 REQPVCYICCERRADAVVMECGHGGLCFACATQLADTPPHQCPVCRKPIQEVLMLQKVQGFCRVLPVPGGGGG 228
RE CYICCERRADAV+MECGHGG+CF CAT LAD+PPH CPVCRK IQEV L +++ F RV+ VP GG
Sbjct: 776 REHSTCYICCERRADAVMMECGHGGVCFTCATTLADSPPHLCPVCRKVIQEVFKLHEIREFGRVVVVPPASGG 848
BLAST of mRNA_P-fluviatile_contig15.2391.1 vs. uniprot
Match: A0A7S3ZTM6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTM6_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 2.570e-13 Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = -1
Query: 58 VCYICCERRADAVVMECGHGGLCFACATQLADTPPHQCPVCRKPIQEVLMLQK 216
+CY+CC R +AV+MECGHGG+CF C LA P CP+CR PI VL +++
Sbjct: 539 LCYVCCVSRKNAVIMECGHGGICFECGKSLASRHPRNCPICRAPISAVLRVER 591
BLAST of mRNA_P-fluviatile_contig15.2391.1 vs. uniprot
Match: A0A7S0I1C8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I1C8_9EUKA) HSP 1 Score: 68.9 bits (167), Expect = 1.010e-12 Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = -1
Query: 55 EQPVCYICCERRADAVVMECGHGGLCFACATQLADTPPHQCPVCRKPIQEVLMLQKV 225
E+P C+ICC DAV+MECGHGG+C CATQ A P CP+CR +L++ KV
Sbjct: 42 EEPTCWICCSGPCDAVLMECGHGGICMDCATQCAKKRPPLCPLCRA---RILVVVKV 95
BLAST of mRNA_P-fluviatile_contig15.2391.1 vs. uniprot
Match: R1BX35_EMIHU (RING-type domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BX35_EMIHU) HSP 1 Score: 65.9 bits (159), Expect = 1.950e-11 Identity = 29/72 (40.28%), Postives = 43/72 (59.72%), Query Frame = -1
Query: 19 PQREQPVCYICCERRADAVVMECGHGGLCFACATQLADTPPHQCPVCRKPIQEVLMLQKVQGFCRVLPVPGG 234
P + C+IC E DAV++ECGHGG+C ACA ++ CP+CR+P+ +++ LQ G L +P G
Sbjct: 29 PDAVEDRCWICYEGPRDAVLLECGHGGICVACARRVFKKRGRLCPMCRQPVSQMVQLQLGDGHGSELEMPRG 100
BLAST of mRNA_P-fluviatile_contig15.2391.1 vs. uniprot
Match: A0A7S2XWW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWW7_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 3.060e-11 Identity = 26/56 (46.43%), Postives = 38/56 (67.86%), Query Frame = -1
Query: 61 REQPVCYICCERRADAVVMECGHGGLCFACATQLADTPPHQCPVCRKPIQEVLMLQ 228
R + C +C R++AV++ECGH GLCF CA LA P QCP+CR+ I ++L ++
Sbjct: 28 RGETSCLVCWNARSNAVLLECGHSGLCFPCAQALAQRYPQQCPMCRQNIVQILRIE 83
BLAST of mRNA_P-fluviatile_contig15.2391.1 vs. uniprot
Match: A0A7S3JUI3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUI3_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 3.630e-11 Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = -1
Query: 64 VCYICCERRADAVVMECGHGGLCFACATQLADTPPHQCPVCRKPIQEVLML 216
+CYIC DAV+MECGH G+CF+CA +LA P CP+CR+PI VL L
Sbjct: 429 LCYICYVAPRDAVLMECGHAGVCFSCAQKLAVRHPRSCPICRQPISTVLKL 479
BLAST of mRNA_P-fluviatile_contig15.2391.1 vs. uniprot
Match: A0A7S3EPQ4_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EPQ4_9EUKA) HSP 1 Score: 64.3 bits (155), Expect = 5.950e-11 Identity = 24/52 (46.15%), Postives = 38/52 (73.08%), Query Frame = -1
Query: 61 VCYICCERRADAVVMECGHGGLCFACATQLADTPPHQCPVCRKPIQEVLMLQ 216
+C IC E + DAV++ECGHGG+C+ACA + +CP+CR+P+ +V+ +Q
Sbjct: 30 LCLICFEGQRDAVLLECGHGGICYACARRCFKKKRRECPMCRQPVTQVVHIQ 81
BLAST of mRNA_P-fluviatile_contig15.2391.1 vs. uniprot
Match: A0A0M0J2X5_9EUKA (Putative e3 ubiquitin-protein ligase log2-like protein (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J2X5_9EUKA) HSP 1 Score: 67.0 bits (162), Expect = 1.700e-10 Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = -1
Query: 61 APQREQPVCYICCERRADAVVMECGHGGLCFACATQLADTPPHQCPVCRKPIQEVLMLQ 237
A ++ +C+IC DAV++ECGHGGLCF CAT+ +CP+CR+PI +++ L+
Sbjct: 394 AGSQDGDLCFICYSGPRDAVLLECGHGGLCFGCATRCMQMRFQECPICRQPISQIVQLE 452
BLAST of mRNA_P-fluviatile_contig15.2391.1 vs. uniprot
Match: A0A7S4F120_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F120_CHRCT) HSP 1 Score: 64.7 bits (156), Expect = 8.470e-10 Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = -1
Query: 73 EQPVCYICCERRADAVVMECGHGGLCFACATQLADTPPHQCPVCRKPIQEV 225
+ C+ICC ADAV+++CGHGGLC+ACA + PH CP+CR I+ V
Sbjct: 241 DSSTCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVV 291
BLAST of mRNA_P-fluviatile_contig15.2391.1 vs. uniprot
Match: A0A7S4BGL3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BGL3_CHRCT) HSP 1 Score: 64.7 bits (156), Expect = 9.850e-10 Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = -1
Query: 73 EQPVCYICCERRADAVVMECGHGGLCFACATQLADTPPHQCPVCRKPIQEV 225
+ C+ICC ADAV+++CGHGGLC+ACA + PH CP+CR I+ V
Sbjct: 291 DSSTCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVV 341 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig15.2391.1 >prot_P-fluviatile_contig15.2391.1 ID=prot_P-fluviatile_contig15.2391.1|Name=mRNA_P-fluviatile_contig15.2391.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=122bp PAAAAAAAGNRQDSTEALHLLEHEDLLDWLPAHRALVRGGVGKLGRAGEAback to top mRNA from alignment at P-fluviatile_contig15:596183..596549+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig15.2391.1 ID=mRNA_P-fluviatile_contig15.2391.1|Name=mRNA_P-fluviatile_contig15.2391.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=367bp|location=Sequence derived from alignment at P-fluviatile_contig15:596183..596549+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig15:596183..596549+ >mRNA_P-fluviatile_contig15.2391.1 ID=mRNA_P-fluviatile_contig15.2391.1|Name=mRNA_P-fluviatile_contig15.2391.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=732bp|location=Sequence derived from alignment at P-fluviatile_contig15:596183..596549+ (Porterinema fluviatile SAG_2381)back to top |