mRNA_P-fluviatile_contig15.2381.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig15.2381.1 vs. uniprot
Match: D7G5R3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R3_ECTSI) HSP 1 Score: 654 bits (1686), Expect = 7.090e-225 Identity = 403/713 (56.52%), Postives = 493/713 (69.14%), Query Frame = 1
Query: 34 APRKPSAMATGGRMLNPSVEPAARRESAAQARRNSEGKARQSSAAVENPHKRQLRSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXAALEARNQRRSVGLKRLSLNGNMKEKLINALEGVAKHVAEGGTEKTGIETLQNIMTEAKEKGLGVSKLFQFFLLHSDDGAKRESVERQATEKPAKPEDTTVQPKDKNDSGLGGVFKDTLSSKTRAEASRSSRGAKKKSQEIMPSLQKKARPSTASSKRASGSE-IGAAHGPTGEEEVPANVTNPASSGGISTNSESRKSSMSRRSSFAEEASMRDRLITSTSFQQGLATLGFRLGLEETTALFGHLDTNGDGMIDLAEFTRFCLEIPSMAWKAERARRGVLGI----EGGRELDKAASDMANETLVAGSSVAGEAGVGAGLARLGPVVDLGNVVFKGEKFFWRTKDLIQIVIQLNETKGFLAVSTFHTERLEVFPVIFVDLAKIPLNATAVAEILDQLKTKKLAAKTNREMAGSGVAGAGEENASTKDRGGGEEHENDLSKKAHLQYMANYIVHRITMPDNNGNLLQPDLTRPEEQVNPDLPEGGKQGNSATDA-KTRRGSAVARPGLMKTTFDEWDTLLFPKPPARFHGAPEFPKTKKRESYFQEFLSVTGKFDENRVKAHRLSEEADFLALQVAKTLAPLSHSASAPAPAVLMT--RDVLSVETS-PRLGSGRLVLADDISAKRGR 2145
APRK SA ATGGRM+NPSVEPA+RRESA Q RR+SEG+AR++SA + + S+ G AAL+ARNQRRS+GLKRLS+N +MK+ LIN LE VA+ V G + TGIE LQ IMTEAKEKGLGVS LF FFLL S+ G KRES+ER+A+ +T +K + GG+FKDT SSKTRA+A R+S+ + S E+MPSL+K ARPSTA+SKR S + A + + + +PA+ G S+ S R+SSMSRRSS AEEA MRDRLITS SFQ GLATLGF + EET +F LD NGDG IDLAEFTRFCLEIPSM WKAERARRG+LG +G REL+KAA DMANET+ A A E G+G LA+L P+V LG + ++GEKFFWRTKDLI++V+QLNE KGFLA IP +A A AEIL+ LK K+LAAKT M GSG G GE +A+ + G ++ + LS+KAH+ Y+A+YIVHRITMPD NGNLLQPD+TRPEE+VNP LP GG+ ++ + A KT+RGSA ARPGLM+TTFDEWDTLLFP PP+R G P+F +TKKRESYFQEF SVT KF+ENRV+A RLS EA A+QV+ TLAPL HSAS+PA L +DV + + PR GSGR++LAD+IS +RGR
Sbjct: 2 APRKASACATGGRMINPSVEPASRRESA-QERRDSEGRARRASARASSRESHKRPSAGGRDSASKNGSLVLPQGGDSTTSA----AALQARNQRRSIGLKRLSVNTHMKDSLINTLEDVARDVRMG-LQTTGIEKLQTIMTEAKEKGLGVSNLFHFFLLQSE-GGKRESMERKASSSLETSGETMEPVAEKREGVTGGLFKDTESSKTRAKAVRTSKSGNRASTELMPSLKKGARPSTANSKRTSSDPAMNTARDESSNASGSSQIDDPATKEGDSSTSGRRRSSMSRRSSLAEEAMMRDRLITSASFQHGLATLGFNISTEETAKMFDQLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEDGDRELEKAARDMANETVSAND--AAEGGLGGELAKLEPLVHLGKIFYRGEKFFWRTKDLIEVVVQLNEAKGFLA---------------------IPASAAAEAEILNDLKAKRLAAKTEHAMGGSGSRG-GESDANKEQAGDQQQEDQALSEKAHMAYIADYIVHRITMPDGNGNLLQPDVTRPEEEVNPGLPAGGEGSSTGSGATKTKRGSAAARPGLMRTTFDEWDTLLFPNPPSRVEGVPKFAETKKRESYFQEFCSVTEKFEENRVRAQRLSGEAAAFAMQVSNTLAPLGHSASSPATLALAESQQDVAGGDAATPRRGSGRIILADEISNRRGR 683
BLAST of mRNA_P-fluviatile_contig15.2381.1 vs. uniprot
Match: A0A6H5JYN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYN0_9PHAE) HSP 1 Score: 196 bits (499), Expect = 1.860e-53 Identity = 153/321 (47.66%), Postives = 195/321 (60.75%), Query Frame = 1
Query: 34 APRKPSAMATGGRMLNPSVEPAARRESAAQARRNSEGKARQSSAAVENPHKRQLRSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXAALEARNQRRSVGLKRLSLNGNMKEKLINALEGVAKHVAEGGTEKTGIETLQNIMTEAKEKGLGVSKLFQFFLLHSDDGAKRESVERQATEKPAKPEDTTVQPKDKNDSGLGGVFKDTLSSKTRAEASRSSRGAKKKSQEIMPSLQKKARPSTASSKRASGSEIGAAHGPTGEEEVPANVTNPASSGGISTNSESRKSSMSRRSSFAEEASMRDRLITSTSFQQGLATLGFRLGLE 996
APRK SA ATGGRM+NPSVEPA+RRESA Q RR+SEG+AR++SA + + S+ G AAL+ARNQRRS+GLKRLS+N +MK+ LIN LE VA+ V G + TGIE LQ IMTEAKEKGLGVS LF FFLL S+DG KRES+ER+A+ P +T +K + GG+FKDT SSKTRA+A+RS + S E++ L ++ S ++ + I + + + V +PA+ G S+ S S SS AEEA MRDRLITS SFQ GL TLGF++ E
Sbjct: 2 APRKASACATGGRMINPSVEPASRRESA-QERRDSEGRARRASARASSRESHKRPSAGGRDSASKSESLLLPQGGDSTTSA----AALQARNQRRSIGLKRLSVNTHMKDSLINTLEDVARDVRMG-LQTTGIEKLQTIMTEAKEKGLGVSNLFYFFLLQSEDG-KRESMERKASSSLETPGETMEPVAEKREGATGGLFKDTESSKTRAKAARS-----RASTELVDRLNRRRYLSISAIMVEQCATIVVSAAGSSQ------VDDPATKEGDSSTSGRXXXXXSXXSSLAEEAMMRDRLITSASFQHGLTTLGFKISTE 304
BLAST of mRNA_P-fluviatile_contig15.2381.1 vs. uniprot
Match: D7FJC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC1_ECTSI) HSP 1 Score: 142 bits (357), Expect = 5.400e-36 Identity = 75/119 (63.03%), Postives = 91/119 (76.47%), Query Frame = 1
Query: 1795 MKTTFDEWDTLLFPKPPARFHGAPEFPKTKKRESYFQEFLSVTGKFDENRVKAHRLSEEADFLALQVAKTLAPLSHSASAPAPAVLMT--RDVLSVETS-PRLGSGRLVLADDISAKRG 2142
M+TTFDEWDTLLFP PP+R G P+F +TKKRESYFQEF SVT KF+ENRV+A RLS EA A+QV+ TLAPL HSAS+PA L +DV + + PR GSGR++LAD+IS +RG
Sbjct: 1 MRTTFDEWDTLLFPNPPSRVEGVPKFAETKKRESYFQEFCSVTEKFEENRVRAQRLSGEAAAFAMQVSNTLAPLGHSASSPATLALAESQQDVAGGDAATPRRGSGRIILADEISNRRG 119
BLAST of mRNA_P-fluviatile_contig15.2381.1 vs. uniprot
Match: A0A835YNE5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNE5_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 6.940e-18 Identity = 83/311 (26.69%), Postives = 142/311 (45.66%), Query Frame = 1
Query: 937 ITSTSFQQGLATLG---FRLGLEETTALFGHLDTNGDGMIDLAEFTRFCLEIPSMAWKAERARRGVLGIEGGRELDKAA--SDMANETLVAGSSVAGEAGVGAGLARLGPVVDLGNVVFKGEKFFWRTKDLIQIVIQLNETKGFLAVSTFHTERLEVFPVIFVDLAKIPLNATAVAEILDQL------KTKKLAAKTNREMAGSGVAGAGEENASTKDRGGGEEHENDLSKKAHLQYMANYIVHRITMPDNNGNLLQPDLTRPEEQVNPDLPEGGKQGNSATDAKTRRGSAVAR--PGLMKTTFDEWDTLL 1830
+T+ F++ L L F L E L H D N +G I+L+EF FC+ IPS+AWKAERARR + ++G L +AA S+ T A VDLG + + FFWR++ + +V+ N +G + +ST +R FP IFV+ ++IP+ + + +D K + +++ G+ +E ST++R +L + + ++ Y+++R+ +PD D +P P L K +T K+ +A+A P L + + D ++L
Sbjct: 63 MTADDFERALRELSPQHFPLSAAELDELMAHFDANRNGRIELSEFMEFCMAIPSLAWKAERARR-MSAVDGPEALTEAARNSERRRSTCKA--------------------VDLGEKIHDRKMFFWRSQQNLDVVLHENIGEGVVIISTRSFDRDLTFPPIFVEASRIPIARAQINKAVDDKELSVVDKRQAFPPQSHHAQIAKRQEGSRQEPISTQERA-------ELYEATRKELISEYLLNRLKVPD--------DANKP-----PGLSAAAKSPKRSTSPKSVAAAAMAAEAPFLQRLSTDGAGSVL 332
BLAST of mRNA_P-fluviatile_contig15.2381.1 vs. uniprot
Match: D8LSJ9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 1.080e-17 Identity = 62/171 (36.26%), Postives = 91/171 (53.22%), Query Frame = 1
Query: 937 ITSTSFQQGLATLG---FRLGLEETTALFGHLDTNGDGMIDLAEFTRFCLEIPSMAWKAERARRGVLGIEGGRELDKAASDMANETLVAGSSVAGEAGVGAGLARLGPVVDLGNVVFKGEKFFWRTKDLIQIVIQLNETKGFLAVSTFHTERLEVFPVIFVDLAKIPLNAT 1440
+T F+ L LG F L E L DT+G+G ++L EF FCL IPS+ W+AE+ARR + E EL+ AA +A SS+ V +G +V +G +FFWR+K+ I + + LN +G + +ST ER +P IFVD++KIP++ T
Sbjct: 143 VTPLMFESALRKLGQRAFDLDEMELEHLVTVFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARR-LNNAESKDELNVAARKIARRR----SSLR--------------AVPIGELVHQGSRFFWRSKETIDVALHLNADEGLMTISTRCPERGYNYPAIFVDVSKIPVHKT 294
BLAST of mRNA_P-fluviatile_contig15.2381.1 vs. uniprot
Match: D8LCP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP2_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 1.080e-13 Identity = 61/158 (38.61%), Postives = 86/158 (54.43%), Query Frame = 1
Query: 1000 TTALFG----HLDTNGDGMIDLAEFTRFCLEIPSMAWKAERARR-------GVLGIEGGREL--DKAASDMANETLVAGSSVAGEAGVGAGLARLGPVVDLGNVVFKGEKFFWRTKDLIQIVIQLNETKGFLAVSTFHTERLEVFPVIFVDLAKIPLN 1434
T+ LFG DT+G G I+L+EF R+CL+I +MAWKAER RR G G G E+ D+AA+ MA E VA + + E P LG ++++G K FWRT + ++I + N+ K +A+ST E FPV+ VD I +N
Sbjct: 126 TSQLFGVFLETFDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSGGHGKRGDGEIGIDEAAARMAGE--VAQAQLPPEQ----------PRFPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVN 271 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig15.2381.1 >prot_P-fluviatile_contig15.2381.1 ID=prot_P-fluviatile_contig15.2381.1|Name=mRNA_P-fluviatile_contig15.2381.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=707bp MAAPRKPSAMATGGRMLNPSVEPAARRESAAQARRNSEGKARQSSAAVENback to top mRNA from alignment at P-fluviatile_contig15:448752..461152+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig15.2381.1 ID=mRNA_P-fluviatile_contig15.2381.1|Name=mRNA_P-fluviatile_contig15.2381.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=12401bp|location=Sequence derived from alignment at P-fluviatile_contig15:448752..461152+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig15:448752..461152+ >mRNA_P-fluviatile_contig15.2381.1 ID=mRNA_P-fluviatile_contig15.2381.1|Name=mRNA_P-fluviatile_contig15.2381.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4242bp|location=Sequence derived from alignment at P-fluviatile_contig15:448752..461152+ (Porterinema fluviatile SAG_2381)back to top |