mRNA_P-fluviatile_contig15.2372.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig15.2372.1
Unique NamemRNA_P-fluviatile_contig15.2372.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig15.2372.1 vs. uniprot
Match: A0A6H5KNK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK9_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 3.580e-79
Identity = 116/138 (84.06%), Postives = 125/138 (90.58%), Query Frame = 1 
Query:    1 APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEVRMVDRLADDLVHGKGFSASAQYISQAYTTKFIVDQLKYTSLVNARRSGSSILRSVNLA 414
            APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKC E N+GK EAEKR TSFNAWDAGCLRRLP+Y+SKEF FLLTKRSGIE+ MVDRLADDLVHGKGFSA+A+ I QA+TTKF+VDQLKYTSLVN RR+ S I RS NLA
Sbjct:   53 APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCAEFNEGKQEAEKRKTSFNAWDAGCLRRLPEYMSKEFHFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLA 190
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BLAST of mRNA_P-fluviatile_contig15.2372.1 vs. uniprot
Match: A0A6H5L7G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G9_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 1.450e-78
Identity = 117/140 (83.57%), Postives = 127/140 (90.71%), Query Frame = 1 
Query:    1 APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEVRMVDRLADDLVHGKGFSASAQYISQAYTTKFIVDQLKYTSLVNARRSGSSILRSVNLAAT 420
            APDGWNP+GPRRVFM+HDVAYVMGFRYKCAKC E NKGK EAEKR TSFNAWDAGCLRRLP+Y+SKEFPFLLTKRSGIE+ MVDRLADDLVHGKGFSA+A+ I QA+TTKF+VDQLKYTSLVN RR+ S I RS NLA T
Sbjct:  127 APDGWNPQGPRRVFMDHDVAYVMGFRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKT 266
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BLAST of mRNA_P-fluviatile_contig15.2372.1 vs. uniprot
Match: A0A6H5JPP4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP4_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 4.400e-77
Identity = 116/138 (84.06%), Postives = 125/138 (90.58%), Query Frame = 1 
Query:    1 APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEVRMVDRLADDLVHGKGFSASAQYISQAYTTKFIVDQLKYTSLVNARRSGSSILRSVNLA 414
            APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKC E NKGK EAEKR TSFNAW AGCLRRLP+Y+SKEFPFLLTKRSGIE+ MVDRLADDLVHGKGFSA+A+ I QA+TTKF+VDQLKYTSLV+ RR+ S I RS NLA
Sbjct:  127 APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCAEFNKGKQEAEKRKTSFNAWGAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNICQAHTTKFMVDQLKYTSLVSTRRTSSGIFRSANLA 264
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BLAST of mRNA_P-fluviatile_contig15.2372.1 vs. uniprot
Match: A0A6H5KT01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT01_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 3.370e-76
Identity = 114/140 (81.43%), Postives = 123/140 (87.86%), Query Frame = 1 
Query:    1 APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEVRMVDRLADDLVHGKGFSASAQYISQAYTTKFIVDQLKYTSLVNARRSGSSILRSVNLAAT 420
            APDGWNPKGPRRVFM+HDVAYVMGFRYKCAK  E NKGK EAE R T  NAWDAGCLRRLP+Y+SKEFPFLLTKRSGIE+ MVDRLADDLVHGKGFSA+A+ I QA+TTKF+VDQLKYTSLVN RR+ S I RS NLA T
Sbjct:    6 APDGWNPKGPRRVFMDHDVAYVMGFRYKCAKGAEFNKGKQEAETRKTRVNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKT 145
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BLAST of mRNA_P-fluviatile_contig15.2372.1 vs. uniprot
Match: A0A6H5KDX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX0_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 1.470e-74
Identity = 114/140 (81.43%), Postives = 123/140 (87.86%), Query Frame = 1 
Query:    1 APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEVRMVDRLADDLVHGKGFSASAQYISQAYTTKFIVDQLKYTSLVNARRSGSSILRSVNLAAT 420
            APDGWNPKGPRRVF EHDVAYVM FRYKCAKC E NKGK EAEK  TSFNAWDAGCLRRLP+Y+SKEFPFLLTKRSGIE+ MV+RLADDLVHGK FSA+A+ I QA+TTKF+VDQLKYTSLVN RR+ S I RS NLA T
Sbjct:   93 APDGWNPKGPRRVFTEHDVAYVMEFRYKCAKCAEFNKGKQEAEKHKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVNRLADDLVHGKDFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLANT 232
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BLAST of mRNA_P-fluviatile_contig15.2372.1 vs. uniprot
Match: A0A6H5KGK6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK6_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 1.320e-66
Identity = 103/126 (81.75%), Postives = 111/126 (88.10%), Query Frame = 1 
Query:   43 MEHDVAYVMGFRYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEVRMVDRLADDLVHGKGFSASAQYISQAYTTKFIVDQLKYTSLVNARRSGSSILRSVNLAAT 420
            MEHDVAYVMGFRYKCAKC E NKGK EAEKR TSFNAWDAGCLRRLP+Y+SKEFPFLLTKRSGIE+ MVDRLADDLVHGKG SA+A+ I QA+TTKF+VD LKYTSLVN RR+ S I RS NLA T
Sbjct:    1 MEHDVAYVMGFRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGLSAAAKNIRQAHTTKFMVDHLKYTSLVNTRRTSSGIFRSANLAKT 126
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BLAST of mRNA_P-fluviatile_contig15.2372.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 1.270e-65
Identity = 113/166 (68.07%), Postives = 125/166 (75.30%), Query Frame = 1 
Query:    1 APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEVRMVDRLADDLVHGKGFSASAQYISQA--------------------------YTTKFIVDQLKYTSLVNARRSGSSILRSVNLAAT 420
            APDGWNPKGPRRVFMEHDVAY+MGFRYKCAKC + N+GK EAEKR TSFNAWDAGCL+RLP+Y+SKEFP LLTKRSGIE+RMVDRLADDLVHGKGFSA+A+ I Q                            TTKF+VDQLKYTSLVN+RR+ S I RS N A T
Sbjct:  127 APDGWNPKGPRRVFMEHDVAYIMGFRYKCAKCAKFNQGKEEAEKRKTSFNAWDAGCLQRLPEYISKEFPSLLTKRSGIEIRMVDRLADDLVHGKGFSAAAKNICQVNVHFLICSVLKITXXXXXXXXXXXXXXTTKFMVDQLKYTSLVNSRRTSSGIFRSANHAKT 292
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BLAST of mRNA_P-fluviatile_contig15.2372.1 vs. uniprot
Match: A0A6H5JXN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN0_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 2.370e-64
Identity = 99/117 (84.62%), Postives = 106/117 (90.60%), Query Frame = 1 
Query:    1 APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEVRMVDRLADDLVHGKGFSASAQYISQAYTTKFIVDQLK 351
            APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKC E NKGK EAEKR TSFNAWDAGCLRRLP+Y+SKEFPFLLTKRSGIE+  VDRL D LVHGKGFS +A+ I QA+TTKF+VDQLK
Sbjct:  191 APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICKVDRLTDHLVHGKGFSGAAKDIRQAHTTKFMVDQLK 307
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BLAST of mRNA_P-fluviatile_contig15.2372.1 vs. uniprot
Match: A0A6H5K4A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A9_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 1.290e-61
Identity = 99/126 (78.57%), Postives = 109/126 (86.51%), Query Frame = 1 
Query:   43 MEHDVAYVMGFRYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEVRMVDRLADDLVHGKGFSASAQYISQAYTTKFIVDQLKYTSLVNARRSGSSILRSVNLAAT 420
            M+HDVAYVMGFR KCAK  E NKGK EAEKR TSFNAWDAGCLRRLP+Y+SKEFPFLLT+RSGIE+ MV RLADDLV GKGFSA+A+ I QA+TTKF+VDQLKYTSLVN RR+ S I RS NLA T
Sbjct:    1 MDHDVAYVMGFRCKCAKRAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTERSGIEICMVGRLADDLVRGKGFSAAAKNILQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKT 126
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BLAST of mRNA_P-fluviatile_contig15.2372.1 vs. uniprot
Match: D7FSB0_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSB0_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 5.700e-60
Identity = 94/118 (79.66%), Postives = 103/118 (87.29%), Query Frame = 1 
Query:   67 MGFRYKCAKCVECNKGKTEAEKRATSFNAWDAGCLRRLPDYVSKEFPFLLTKRSGIEVRMVDRLADDLVHGKGFSASAQYISQAYTTKFIVDQLKYTSLVNARRSGSSILRSVNLAAT 420
            MGFRYKCAKC E NKGK E  KR TSFNAWDAGCLRRLP+Y+SKEFPFLLTKRSGIE+RMVDRLADDLVHGK FSA+A+ I QA+TTKF+VDQLK TSLVN+RR+ S I RS NLA T
Sbjct:    1 MGFRYKCAKCAEFNKGKQEVGKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEIRMVDRLADDLVHGKDFSAAAKNICQAHTTKFMVDQLKCTSLVNSRRTSSGIFRSANLAKT 118
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2372.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNK9_9PHAE3.580e-7984.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7G9_9PHAE1.450e-7883.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPP4_9PHAE4.400e-7784.06Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KT01_9PHAE3.370e-7681.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX0_9PHAE1.470e-7481.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGK6_9PHAE1.320e-6681.75Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JQG2_9PHAE1.270e-6568.073'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JXN0_9PHAE2.370e-6484.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4A9_9PHAE1.290e-6178.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSB0_ECTSI5.700e-6079.66Uncharacterized protein n=4 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig15contigP-fluviatile_contig15:233530..234274 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score138.3
Seed ortholog evalue2.8e-30
Seed eggNOG ortholog2880.D7FIV2
Preferred nameWRN
KEGG koko:K10900,ko:K20777
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Exons3
Model size421
Cds size420
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig15.2372.1prot_P-fluviatile_contig15.2372.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig15 233530..234274 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815644.3899662-CDS-P-fluviatile_contig15:233529..2336061622815644.3899662-CDS-P-fluviatile_contig15:233529..233606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 233530..233606 +
1693562667.5556042-CDS-P-fluviatile_contig15:233529..2336061693562667.5556042-CDS-P-fluviatile_contig15:233529..233606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 233530..233606 +
1622815644.4025915-CDS-P-fluviatile_contig15:233769..2340071622815644.4025915-CDS-P-fluviatile_contig15:233769..234007Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 233770..234007 +
1693562667.5684965-CDS-P-fluviatile_contig15:233769..2340071693562667.5684965-CDS-P-fluviatile_contig15:233769..234007Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 233770..234007 +
1622815644.4196367-CDS-P-fluviatile_contig15:234169..2342741622815644.4196367-CDS-P-fluviatile_contig15:234169..234274Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 234170..234274 +
1693562667.578509-CDS-P-fluviatile_contig15:234169..2342741693562667.578509-CDS-P-fluviatile_contig15:234169..234274Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 234170..234274 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig15.2372.1

>prot_P-fluviatile_contig15.2372.1 ID=prot_P-fluviatile_contig15.2372.1|Name=mRNA_P-fluviatile_contig15.2372.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=140bp
APDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCVECNKGKTEAEKRATSFN
AWDAGCLRRLPDYVSKEFPFLLTKRSGIEVRMVDRLADDLVHGKGFSASA
QYISQAYTTKFIVDQLKYTSLVNARRSGSSILRSVNLAAT
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mRNA from alignment at P-fluviatile_contig15:233530..234274+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig15.2372.1 ID=mRNA_P-fluviatile_contig15.2372.1|Name=mRNA_P-fluviatile_contig15.2372.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=745bp|location=Sequence derived from alignment at P-fluviatile_contig15:233530..234274+ (Porterinema fluviatile SAG_2381)
GCACCTGATGGCTGGAACCCTAAGGGACCACGCCGGGTGTTCATGGAGCA
CGACGTGGCGTACGTGATGGGGTTTCGGTAAGATTAGACATGCGAGAATG
TTTTTCGTTCGATAAACTCCCATCGGTCTATTTTCGTGGCATCCGACTTG
TTCTGGGTTTCTGGTTGATTGGAGTTCGTGTTGTGGTTGTCCGACCATTT
GTCATCGCTTTGGTGTCTGTTCTCTTGCACGTACGTGCAGGTACAAGTGT
GCGAAGTGCGTGGAGTGCAACAAAGGCAAGACGGAGGCGGAGAAGCGCGC
GACGAGCTTCAATGCGTGGGACGCTGGGTGCCTCCGACGTCTTCCGGACT
ACGTCTCGAAGGAATTCCCTTTCCTTCTCACGAAGCGATCGGGCATTGAG
GTTCGCATGGTGGACCGGCTTGCAGATGATTTGGTGCATGGGAAGGGCTT
CTCCGCTTCTGCGCAGTATATTAGCCAGGTGAATTTGCAGCGTCTCAGAG
GACGGGCTGGTCTTTGCTTTTCGATCCTGTTCACAACGTTTTCTGATGGT
ACCGCAAGCTCTACCGTAGGAAATGTCGGACCTCATAAGCGCCGACCCGT
GCTACAACGAAAACGTGTCGTCCTCATAATGCTGTTGCAGGCGTACACGA
CCAAGTTCATAGTGGACCAGCTCAAGTACACCTCTCTGGTCAACGCCCGG
CGGTCCGGCTCATCAATCTTGCGCTCGGTCAACCTAGCCGCAACC
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Coding sequence (CDS) from alignment at P-fluviatile_contig15:233530..234274+

>mRNA_P-fluviatile_contig15.2372.1 ID=mRNA_P-fluviatile_contig15.2372.1|Name=mRNA_P-fluviatile_contig15.2372.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=840bp|location=Sequence derived from alignment at P-fluviatile_contig15:233530..234274+ (Porterinema fluviatile SAG_2381)
GCACCTGATGGCTGGAACCCTAAGGGACCACGCCGGGTGTTCATGGAGCA
CGACGTGGCGTACGTGATGGGGTTTCGGCACCTGATGGCTGGAACCCTAA
GGGACCACGCCGGGTGTTCATGGAGCACGACGTGGCGTACGTGATGGGGT
TTCGGTACAAGTGTGCGAAGTGCGTGGAGTGCAACAAAGGCAAGACGGAG
GCGGAGAAGCGCGCGACGAGCTTCAATGCGTGGGACGCTGGGTGCCTCCG
ACGTCTTCCGGACTACGTCTCGAAGGAATTCCCTTTCCTTCTCACGAAGC
GATCGGGCATTGAGGTTCGCATGGTGGACCGGCTTGCAGATGATTTGGTG
CATGGGAAGGGCTTCTCCGCTTCTGCGCAGTATATTAGCCAGGTACAAGT
GTGCGAAGTGCGTGGAGTGCAACAAAGGCAAGACGGAGGCGGAGAAGCGC
GCGACGAGCTTCAATGCGTGGGACGCTGGGTGCCTCCGACGTCTTCCGGA
CTACGTCTCGAAGGAATTCCCTTTCCTTCTCACGAAGCGATCGGGCATTG
AGGTTCGCATGGTGGACCGGCTTGCAGATGATTTGGTGCATGGGAAGGGC
TTCTCCGCTTCTGCGCAGTATATTAGCCAGGCGTACACGACCAAGTTCAT
AGTGGACCAGCTCAAGTACACCTCTCTGGTCAACGCCCGGCGGTCCGGCT
CATCAATCTTGCGCTCGGTCAACCTAGCCGCAACCGCGTACACGACCAAG
TTCATAGTGGACCAGCTCAAGTACACCTCTCTGGTCAACGCCCGGCGGTC
CGGCTCATCAATCTTGCGCTCGGTCAACCTAGCCGCAACC
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