mRNA_P-fluviatile_contig14.2320.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2320.1
Unique NamemRNA_P-fluviatile_contig14.2320.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:2806691..2808637 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons3
Model size517
Cds size513
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2320.1prot_P-fluviatile_contig14.2320.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 2806691..2808635 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815589.9324768-CDS-P-fluviatile_contig14:2806690..28068101622815589.9324768-CDS-P-fluviatile_contig14:2806690..2806810Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2806691..2806810 +
1693562364.0403812-CDS-P-fluviatile_contig14:2806690..28068101693562364.0403812-CDS-P-fluviatile_contig14:2806690..2806810Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2806691..2806810 +
1622815589.9447916-CDS-P-fluviatile_contig14:2807971..28081791622815589.9447916-CDS-P-fluviatile_contig14:2807971..2808179Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2807972..2808179 +
1693562364.0541184-CDS-P-fluviatile_contig14:2807971..28081791693562364.0541184-CDS-P-fluviatile_contig14:2807971..2808179Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2807972..2808179 +
1622815589.95588-CDS-P-fluviatile_contig14:2808450..28086351622815589.95588-CDS-P-fluviatile_contig14:2808450..2808635Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2808451..2808635 +
1693562364.063209-CDS-P-fluviatile_contig14:2808450..28086351693562364.063209-CDS-P-fluviatile_contig14:2808450..2808635Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2808451..2808635 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2320.1

>prot_P-fluviatile_contig14.2320.1 ID=prot_P-fluviatile_contig14.2320.1|Name=mRNA_P-fluviatile_contig14.2320.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=171bp
RRRAIRQTAVAAHAPRTMSLEAAAREFNIIETRMKQTGDAGNGNMDGYGK
EGHFLTTSSCSATALGASDRACASAWHSQGGKHQRDGAGDEELVHSKCSS
PTRVHLRRTGSIEIERGGRFETPSSSSPLLSSRGLHEAARIHHRDATTSG
GLAAPPRAATTTAGATATAAS
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mRNA from alignment at P-fluviatile_contig14:2806691..2808637+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2320.1 ID=mRNA_P-fluviatile_contig14.2320.1|Name=mRNA_P-fluviatile_contig14.2320.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1947bp|location=Sequence derived from alignment at P-fluviatile_contig14:2806691..2808637+ (Porterinema fluviatile SAG_2381)
CGCCGTCGTGCGATCAGACAAACTGCTGTGGCCGCGCACGCACCTCGAAC
TATGTCGCTGGAGGCGGCCGCACGAGAGTTCAACATAATCGAGACGAGAA
TGAAGCAGACGGGAGATGCTGTGAGTGTGCAGGGGCTGCCGCAGTCTTTC
AAGACGAGTTGCACGCTCGGACGGCGTCGTCCTGCAGCTGTTTGTTGTGC
GAGTTCCATGCGTAACGCCTGGGGGCCGACCGCTTCTATATCACGTCTCC
GCGACCATAAGAACACCCAACTCAGCAGACTAGGGCGCTCCTGATTACCC
CATGTGCGGTTTCCGCCCGATCTTCCTACCGTTCCACCGTTTGCATCCGA
AGGCACAGCAGAGAGGTTGTGTCCTGTTTCGTGTATCTGTATCCTGCAAT
ACACCGTTTGAGAGACAAAACCTAACGGACGCCTGTTGTGCGTTGCAGGC
ACCCCTAGGAAGGTTCGTTCGCAACGCTGGTGGTTTCGACAGGGACAAAG
ACGGCGACCTCGTCTCACTACTGATTTTCCGCGCTCACATACCCCATTCA
CCGCGTAGCGAAACTTCCGGTAACATGCACTAGACGCACAGACAGGCTGC
TTGTGACCCTTTGTCCCGTTGGTCGTTTTTCCACTATCATGCCCCGGTGG
TCTAGTTGTTGGTGTACCTGTAACCTTCTAGCAGACAAGTTCGTGGGTTC
GAATCCCAGCTTGAGCGACTTTCTCTCACAAAAAATGGATTTATTCTCTC
ACTTGCGTTCGTGCCGGTGGATAGCGCCTAGTGCGTGTGTACGCAGTAGG
AAAGCGGTGGCTGAAACTTTCTCATAACAAAAACGTTCAGTCAGTACCGC
CGGAGGGAGTGGGGGCCTCAGGGAGGGGAACCTTATGTGCGACTACGGTT
AAGATATTCAGGCAAGATACCCCGGGTAGCAAGGCCCCCTTCGAACTCTG
GAAATAAACGTGACAAAAAAAAATTAAAATGTCAACACAGATAATCACAG
CTTTTCGGGAAAAGGCACGCGCTCACTTGGGTTCCGCCGGCTCGTAGTTA
TGAGAAAGTGACAAACGAAAGCTGTTGTTCCGACTCGGGAGTGACTGGGT
CTTGTGCTGGCCGTGTTGCTGCACACAACGACCGCCGTGAAATGAATGCC
CATTTTTCACTTTATGCTCGGCTGCTGCTTCGCGACGCGGCATGTGTTTT
TGGCTCTAATTTTTTAAGCCGGGTGCTTGTTTTGACACTGCGCCCTGTGT
ATCTGCTGCACGTACATGTACACGGCAGCAGGGGAATGGCAATATGGACG
GCTATGGCAAGGAAGGGCACTTTCTTACCACCTCGTCGTGTTCAGCAACC
GCTCTCGGGGCTTCAGATCGCGCCTGCGCATCGGCCTGGCATAGCCAAGG
GGGCAAGCACCAGAGGGACGGGGCTGGGGACGAGGAGTTGGTGCACAGCA
AGTGCTCGTCCCCAACGCGGGTCCACCTGCGGCGAACGGGTGAGTTTTAC
GTTTAAGGGTTATTTTTCAGGTTAACGCCGAGGGGGAGGACGGAGTACGT
CCGCCTATGCATGCCGCACGGCAGTTGTTGTCCGTCGACCGTTGTCGAAA
CTACTGATGCCGTGCGTTCATCATATGTTTTGGCCCGCAGATGCAGTAAA
ACATGCGATGTATGTTGAGAACGTTCCTATATCATCGAGTGCTCTTGACT
GTTGTCCCATTTGGGGGCCGAGTAACAGCTTCTGGGCGGCCCTCGCGTCA
CTAATCTCAGGGAGCATCGAGATCGAACGCGGGGGTCGCTTCGAAACACC
GTCGTCGTCGTCGCCATTGCTGTCGTCTCGAGGCTTGCACGAGGCAGCCC
GAATACACCACCGTGATGCTACCACTAGCGGTGGCCTGGCTGCACCGCCC
CGTGCAGCTACTACCACCGCCGGTGCCACTGCCACCGCCGCCTCCGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig14:2806691..2808637+

>mRNA_P-fluviatile_contig14.2320.1 ID=mRNA_P-fluviatile_contig14.2320.1|Name=mRNA_P-fluviatile_contig14.2320.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1026bp|location=Sequence derived from alignment at P-fluviatile_contig14:2806691..2808637+ (Porterinema fluviatile SAG_2381)
CGCCGTCGTGCGATCAGACAAACTGCTGTGGCCGCGCACGCACCTCGAAC
TATGTCGCTGGAGGCGGCCGCACGAGAGTTCAACATAATCGAGACGAGAA
TGAAGCAGACGGGAGATGCTCGCCGTCGTGCGATCAGACAAACTGCTGTG
GCCGCGCACGCACCTCGAACTATGTCGCTGGAGGCGGCCGCACGAGAGTT
CAACATAATCGAGACGAGAATGAAGCAGACGGGAGATGCTGGGAATGGCA
ATATGGACGGCTATGGCAAGGAAGGGCACTTTCTTACCACCTCGTCGTGT
TCAGCAACCGCTCTCGGGGCTTCAGATCGCGCCTGCGCATCGGCCTGGCA
TAGCCAAGGGGGCAAGCACCAGAGGGACGGGGCTGGGGACGAGGAGTTGG
TGCACAGCAAGTGCTCGTCCCCAACGCGGGTCCACCTGCGGCGAACGGGG
GAATGGCAATATGGACGGCTATGGCAAGGAAGGGCACTTTCTTACCACCT
CGTCGTGTTCAGCAACCGCTCTCGGGGCTTCAGATCGCGCCTGCGCATCG
GCCTGGCATAGCCAAGGGGGCAAGCACCAGAGGGACGGGGCTGGGGACGA
GGAGTTGGTGCACAGCAAGTGCTCGTCCCCAACGCGGGTCCACCTGCGGC
GAACGGGGAGCATCGAGATCGAACGCGGGGGTCGCTTCGAAACACCGTCG
TCGTCGTCGCCATTGCTGTCGTCTCGAGGCTTGCACGAGGCAGCCCGAAT
ACACCACCGTGATGCTACCACTAGCGGTGGCCTGGCTGCACCGCCCCGTG
CAGCTACTACCACCGCCGGTGCCACTGCCACCGCCGCCTCCGGAGCATCG
AGATCGAACGCGGGGGTCGCTTCGAAACACCGTCGTCGTCGTCGCCATTG
CTGTCGTCTCGAGGCTTGCACGAGGCAGCCCGAATACACCACCGTGATGC
TACCACTAGCGGTGGCCTGGCTGCACCGCCCCGTGCAGCTACTACCACCG
CCGGTGCCACTGCCACCGCCGCCTCC
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