mRNA_P-fluviatile_contig14.2290.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2290.1 vs. uniprot
Match: D7FNS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNS0_ECTSI) HSP 1 Score: 556 bits (1433), Expect = 5.430e-181 Identity = 416/884 (47.06%), Postives = 493/884 (55.77%), Query Frame = 1
Query: 274 IELQQRKIDALGRLRKQWLSGEREISARV----ELPRELLADGSGSETIAPAGGAYQEIPGRAYQWGASQTLPQIPTGMPEKYMTPHARFPLASPVVATELLSFRLKGGKTRPSPGGSXXXXXXXXXSSRQYATGGARFGYLNVFVFLHADGTVRLLDMNGEEILAFDAGHRRSDRGAVTSPAAILSSSAGVGRGYDETVEESATAAAAA--AEVARPAPVTGLAADTSEASPVLVTAGADGTARVHALSVYYRGRRVAGAGSRGGRGRRDGANKPEEGPPGXXXXXXXXHGSGPREQQDKVPQTTAANSGEDIVGEYGGGISGSSSSKESRRCRDEDARGGGTDEGDSTRGSGLPRHPATGMGVGITVESKTCLGTAC----GDSGSGSRPDSAETAYVGVDAGAEAAASAGATVGVGSLPMHGE--AAAVTSIDAYFHRSLGATVVIAGYSSGGVRFFHAGNGTELSSVDAGS-AVLAVKRSGQSIAFSDGEDVHFVNAAKFTRAMGRVCRGGRRDRSLSSSSDGDGGRNVTALAFDAISTGVLYVGFGTGEVMAYDSRLQEADGSYACLPSHRLPPPAQQSPPASHV----AGAAGLENTEGXXXXXXXXXPDAGCESISTVRGYAIVSLGPLLSVYNTTDGDSRLLFTRYTHAAAGGAAEAIAAGRGDPGPCSEGVLAGF---GGGGGPAAF--------AGSSKWSVMSSN-SGELLMAEVPRCSAEMIVHRAVLPYDRSVPDISWMRVPVLLLGLLVVAVTQVYSRRAAKTAVGRTSRRRA---GRGWVPDDGDAGGGFSVDGQADLHSRGDLGSRGRLSGRDWKEVTERRSFRGDGGTRE---------------------SFSRLPPARQGYGKAW 2766
++LQ RK++AL LR+QWLSGER++ V L R L DG + AP Q G +WG S Q+P G E+YMTPHA+FP +S VVATE+ SFRLKGG XXXXX G R G+LNVF +LHADG VRL D + EEIL FDAGH R + SP+ + S+ +++E+A +AA AE A PA V G+ AD+SE+ PVLVTAGADGTARVHAL+VYYRGR+VAG G RGGR G K E S P + + G++GG D GS P AT MGVG+TVE KTCLG+AC G S ET VG G + + + GSLP GE A +TS+DA+FHRSLG TVVIAGYSSGGV F+HAGNGT+L+SVD GS AVLAVKR GQSIAF+DGEDVHF ++ KFTRA GRVCRGGRR VTALAFDA+STGVLYVGFGTG+VMAYDSR+QE D SYACLPS+RLPPP Q P+ H A AAG + G GC+SISTVRGYAIVS G LLSVYNTTD RLLFT + AAA A+A G C + G GGG G +G WSVMSS+ SGE+L+ E RCSAE++VHRAVLPY+R+ PD+SW+R PVLLLGL VVA+TQVYSRRAA A GRTSR++ RGW G G S + + RD +++ER S R D G R SRLP RQGYG W
Sbjct: 1 MKLQARKVEALEELRRQWLSGERKLPNHVPPLGSLGRVLGDDGR--DVPAPTSDTRQNT-GLGPKWGTSTPPSQLPIGYFEQYMTPHAKFPSSSAVVATEMFSFRLKGGXXX----------XXXXXXXXXXXXXGIRSGFLNVFAYLHADGMVRLRDTDAEEILVFDAGHTRRE----ASPSLTTADSSSSATADAGSLKEAAVSAAXXXXAETATPAGVVGMTADSSESGPVLVTAGADGTARVHALAVYYRGRQVAGVGVRGGRSDPSGRRKKAE-------------ASDPSSSSTRGEAPRRGTGSSEKKGDHGG---------------------------DRPHGS-PPXXXATAMGVGVTVEFKTCLGSACRSPDGLSQLRGMGGDGETVSVGNGGGGDQETAGSVS---GSLPPQGEEMATVITSMDAFFHRSLGTTVVIAGYSSGGVSFYHAGNGTQLASVDTGSSAVLAVKRGGQSIAFTDGEDVHFASSTKFTRAPGRVCRGGRRXXXXXXXXXXXEPAVVTALAFDAVSTGVLYVGFGTGDVMAYDSRVQEMDSSYACLPSYRLPPPLPQQRPSPHADPSTATAAGDGGSGGILLGG------GGCDSISTVRGYAIVSHGGLLSVYNTTDHAGRLLFTTHATAAA-----ALAEGARTEDHCGAPLSPGTESRGGGVGXXXXXXXXXXXPSGGRTWSVMSSSGSGEVLVVEASRCSAEVVVHRAVLPYERNGPDMSWVRFPVLLLGLFVVAITQVYSRRAANNAAGRTSRKKGRSGSRGW------RGAGLSDEXXXXXXXXXXFSADALAQLRD--DLSERTSRRRDWGGRRLGSGRXXXXXXXXXXXXXXXXXSSRLPAPRQGYGDPW 804
BLAST of mRNA_P-fluviatile_contig14.2290.1 vs. uniprot
Match: A0A6H5L6B1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B1_9PHAE) HSP 1 Score: 548 bits (1412), Expect = 1.320e-176 Identity = 427/895 (47.71%), Postives = 496/895 (55.42%), Query Frame = 1
Query: 232 VKLVDEELAELEQLIELQQRKIDALGRLRKQWLSGEREISARV----ELPRELLADGSGSETIAPAGGAYQEIPGRAYQWGASQTLPQIPTGMPEKYMTPHARFPLASPVVATELLSFRLKGG---KTRPSPGGSXXXXXXXXXSSRQYATGGARFGYLNVFVFLHADGTVRLLDMNGEEILAFDAGH-RRSDRGAVTSPAAILSSSAGVGRGYDETVEESATAAAAAAEVARPAPVTGLAADTSEASPVLVTAGADGTARVHALSVYYRGRRVAGAGSRGGRGRRDGANKPEEGPPGXXXXXXXXHGSGPREQQDKVPQTTAANSGEDIVGEYGGGISGSSSSKESRRCRDEDARGGGTDEGDSTRGSGLPRHPATGMGVGITVESKTCLGTAC-GDSGS---GSRPDSAETAYVGVDAGAEAAASAGATVGVGSLPMHGEAAAV-TSIDAYFHRSLGATVVIAGYSSGGVRFFHAGNGTELSSVDAGS-AVLAVKRSGQS----IAFSDGEDVHFVNAAKFTRAMGRVCRGGRRDRSLSSSSDGDGGRN----VTALAFDAISTGVLYVGFGTGEVMAYDSRLQEADGSYACLPSHRLPPPA--QQSPPASHVAGAAGLENTEGXXXXXXXXXPDAGCESISTVRGYAIVSLGPLLSVYNTTDGDSRLLFTRYTHAAAGGAAEAIAAGRGDPGPCSEGVLAGFGGGGGPAAFA--------GSSKWSVMSSNSGELLMAEVPRCSAEMIVHRAVLPYDRSVPDISWMRVPVLLLGLLVVAVTQVYSRRAAKTAVGRTSRRRA--------GRGWVPDDGDAGGGFSVDGQADLHSRGDLGSRGRLSGRDWKEVTERRSFRGDGGTRESF----------SRLPPARQGYGKAW 2766
++L+DEEL ELE+LI+LQ RK++AL LR+QW+SGER+++ V L R L DG G APA Q G ++WG S Q+PTG E+YMTPHA+FP +S VVATE+ SFRLKGG K+R S G + GG R G+LNVF +LHADG VRL D + EEIL FDAGH RR + T PA V G+ AD+SE+ PVLVTAGADGTARVHAL+VYYRGR+VAG G RGGR G K E S P GD GS P MGVG+TVE KTCLG+AC G G S ET VG G + A + + GSLP GE A V TS+DA+FHRSLG TVVIAGYSSGGV F+HAGNGTEL+ +D GS AVLAVKR GQ+ IAF+ GEDVHF +++KFTRA GRVCRGGR VTALAFDA+STGVLYVGFGTG+VMAYDSR+QE D SYACLPS+RLPPP Q+S P + + + XXXXXXXXX GC+SISTVRGYAIVS G LLS YNTTD RLLFT THAAA AE P S G + G G A A G WSVMSS SGE+L+ E RCSAE++VH+AVLPY+R+ PD+SW+R PVLLLGLLVVA+TQVYSRRAA AVGRTSR + G G +D + GGGFS D A L R DL R RDW RS RG SR P +RQGYG W
Sbjct: 69 IRLLDEELVELEKLIKLQARKVEALEELRRQWVSGERKLTKHVPPLGSLGRVLGDDGRG--VPAPASDTRQNT-GLGHKWGTSTPPSQLPTGYYEQYMTPHAKFPSSSAVVATEMFSFRLKGGYSSKSRRSFSGGG-------------SGGGVRSGFLNVFAYLHADGMVRLRDTDAEEILVFDAGHARREALPSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTETPAAVVGMTADSSESGPVLVTAGADGTARVHALAVYYRGRQVAGVGVRGGRSDHSGRRKKAE-------------ASDPSSSTSXXXXXXXXXXXXXXXXXXXXXX---------------------XXXGDRLHGS-PPXXXXXXMGVGVTVEFKTCLGSACRGTDGLLQLRSMGGDGETVSVGNGGGDQETAGSMS----GSLPPQGETATVITSMDAFFHRSLGTTVVIAGYSSGGVSFYHAGNGTELAFIDTGSSAVLAVKRGGQARNRAIAFTVGEDVHFASSSKFTRAPGRVCRGGRWSGGXXXXXXXXXXXXERAVVTALAFDAVSTGVLYVGFGTGDVMAYDSRVQEMDSSYACLPSYRLPPPLPQQRSSPHADPSTSXXXXXXXXXXXXXXXXXXWGGCDSISTVRGYAIVSHGGLLSAYNTTDHAGRLLFT--THAAAAALAEGARTEDHCGAPLSPGTESRRSGVGADALAAAAEEATPSGGRTWSVMSSGSGEVLVVEASRCSAEVVVHKAVLPYERNGPDMSWVRFPVLLLGLLVVAITQVYSRRAASNAVGRTSRNKGRSGSRGLRGAGLSDEDDEGGGGFSADALAQL--RDDLNERTSRR-RDWGG-RRLRSGRGSXXXXXXXXXXXXXXXXXSRFPASRQGYGDPW 902
BLAST of mRNA_P-fluviatile_contig14.2290.1 vs. uniprot
Match: F0YMM9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMM9_AURAN) HSP 1 Score: 63.9 bits (154), Expect = 1.400e-6 Identity = 67/250 (26.80%), Postives = 108/250 (43.20%), Query Frame = 1
Query: 1831 VTALAFDAISTGVLYVGFGTGEVMAYDSRLQEADGSY-ACLPSHRLPPPAQQSPPASHVAGAAGLENTEGXXXXXXXXXPDAGCESISTVRGYAIVSLGPLLSVYNTT---DGDSRLLFTRYTHAAAGGAAEAIAAGRGDPGPCSEGVLAGFGGGGGPAAFAGSSKWSVMSSNSGELLMAEVPRCSAEMIVHRAVLPYDRSVPDISWMRVPVLLLGLLVVAVTQVYSRRAAKTAVGRTSRRRAGRGWVPD 2568
V+ +AFDA++ GVL+V + TGE++A+++R ++ DG AC + +LP +PP ++T +G+ + S L+++NTT G RL+ AA+ +A D P P FA S V + E+L A A ++ ++L YD DISWMR+P+L +GL+VV Q+ + G + GRG + D
Sbjct: 428 VSDVAFDALNPGVLHVAYETGELLAFNTRARQGDGGAPACRLTTKLPSSPHVAPP------------------------------KLATTKGFLVSSSAHFLAIHNTTVPGPGGYRLV-----------AAQRLA-NESDAAP--------------PHKFAASF---VAGMSMQEILFAYDDGAGAVRVLE-SLLRYDPPDRDISWMRMPILFVGLIVVFGFQILRKNGGGRGGGAFGKLGGGRGGISD 617 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2290.1 >prot_P-fluviatile_contig14.2290.1 ID=prot_P-fluviatile_contig14.2290.1|Name=mRNA_P-fluviatile_contig14.2290.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=910bp MGDTTTPPAAGSCDAVNVCHSSGSDTEGDGEHDLTDPEMEQHLHHNTAAAback to top mRNA from alignment at P-fluviatile_contig14:2488937..2498813+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2290.1 ID=mRNA_P-fluviatile_contig14.2290.1|Name=mRNA_P-fluviatile_contig14.2290.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9877bp|location=Sequence derived from alignment at P-fluviatile_contig14:2488937..2498813+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:2488937..2498813+ >mRNA_P-fluviatile_contig14.2290.1 ID=mRNA_P-fluviatile_contig14.2290.1|Name=mRNA_P-fluviatile_contig14.2290.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5460bp|location=Sequence derived from alignment at P-fluviatile_contig14:2488937..2498813+ (Porterinema fluviatile SAG_2381)back to top |