mRNA_P-fluviatile_contig14.2285.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2285.1 vs. uniprot
Match: A0A6H5L2V4_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V4_9PHAE) HSP 1 Score: 369 bits (948), Expect = 1.490e-109 Identity = 377/915 (41.20%), Postives = 440/915 (48.09%), Query Frame = 1
Query: 487 LDPSLKKDLWTEEEEKIIHDAQLRMGNRWADIAKLLKGRSESAVKSHWYATVHKNIRRKENVGREGGXXXXXXXXNEVGPTGGMDSWGAPGGNNXGKNNSEIGGSISSESHTNSIFGSRFLGGDG-YAYPKPNLVPGEAGADGSYPTAQACQVAEGE---GEHLMPSVVAGLGVCRGIAP--TFAASTAATTTSMGQRAPTI-SSEAARGHEFTSP-ALVPTSSFSSSTAATASA-ELGQWQVSNSSKQGLPNQPVFESFVKKERATLP----ITYAELNKTAGTNEGGGSGSCSGSTGAIESVESGSMHSAAPAGNTAVNGQQSNRFRGKIGAV---------SSSLEIEQAPIDAHLTSSSVATKSPPLPAPASSVGSPGGEKQVDNDSKRSRPRLFVNTNVDA-GMYVGGLEQQPRQYHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSA----ARPSLATSSPSLPFGCPPGIGSSAAEAAXXXXETAARYTSGMISMRDQSLPHVHHLQAHQSPQHQXXXXXXXXXXXXXXXXLQHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVERGDGGGGSGHPIAIPGTSVRRYMHVQLLLALMSAPDVKVVIPARAAWEQLGYFSVDALFGPEKPGTRRPGPPRLSPTSISTPTMPGFSPGAYFGSDPAAGPM-PPKRARLSRGL-LNPGGGAGSGS--------------------------------------------VHNIMPMVGGGGGRXXXXGIXXXXXXXXXXXXXXXXXXXXXXXXXXXGMTTHTGAMAMPPPQHSPRTSAILSGLPVGEGLMMLGDAGELLPYAAMSPTSFIGMGGIGPTS---PYQFP 3003
LDPS K WTEEE IIHDA LR+GNRWA+IAKLL GR++SAVK++WY T HKNI R+ R GG GG D + G + + G TN GG G Y PKP++VP EA G C G GE + VVAGLGVC GI P A +TAA + GQ P + ++ AA G E SP ALVP+S+ + T A A+ E +WQVS+ +K+G+ NQ S K E AT P Y EL+K G GS S +G GA+ H A A + AV +R G G V +SSL + + ++AH S++V TKSPPLPAPASSVGS ++Q+ SKR RPRLFVNTNVDA GMY+GG EQQ XXXXXXXXXXXXXXXXXXX XXXXXXX AR A S ++PFGCPPG+GSSAAE XXXX G HPIAIPGTSVRRYMHVQLLLALMSAP ++VV PAR +W++LGY+ VDA+FGP KPG R PGPPRL+PTS + PTMPG SP + FGSD AA + P KRAR G + GGG SG V MP +GG G XXXXXXXXXXX HTGAMAMPPPQHSPRTSAILSGLPVGEG+MMLGD GELLPYA++SPTSFIG+GG PYQFP
Sbjct: 2 LDPSQKNAPWTEEEITIIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWYTTAHKNIGRQNKEIRGGGGD------------GGSDPSRSRDAGARGSSTIDPIGPRGESVATNG-------GGPGFYDDPKPDVVPREAVIAGG------CSAPVGHVEGGECQLQPVVAGLGVCGGIGPPPAMAVATAAAVATHGQGMPPVGAATAAPGVESPSPPALVPSSASTLGTTAPAAVDENNRWQVSDDNKRGVVNQTAIGSLTKTE-ATDPRKAAACYGELDKKVAGENGDGSAS-TGDAGAVHG-----WHLATSAASDAVEEAPGHRKDGSCGVVLGPGGVAPATSSLLEQASVVNAHAVSNTV-TKSPPLPAPASSVGSRDRDQQIG--SKRPRPRLFVNTNVDAAGMYIGGHEQQQHXXXXXXXXXXXXXXXXXXXXXXXXGFEADANAXXXXXXXXXXXXXARAPHAVSMSAVPFGCPPGLGSSAAEXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------GGDHPIAIPGTSVRRYMHVQLLLALMSAPGLRVVTPARVSWDRLGYYPVDAVFGPPKPGARPPGPPRLTPTSTAIPTMPGLSPRSQFGSDSAAAALVPSKRARSGTGPPVAEGGGDSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVCVRETMPAIGGRG------------------------XXXXXXXXXXXXXXXHTGAMAMPPPQHSPRTSAILSGLPVGEGMMMLGDTGELLPYASISPTSFIGIGGXXXXXXXXPYQFP 734
BLAST of mRNA_P-fluviatile_contig14.2285.1 vs. uniprot
Match: D7FNQ9_ECTSI (Transcription factor C-MYB n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ9_ECTSI) HSP 1 Score: 254 bits (649), Expect = 5.290e-69 Identity = 198/446 (44.39%), Postives = 250/446 (56.05%), Query Frame = 1
Query: 265 QGDGEGDDDRGEDSHLGSNTPDHRPWSQKEDETITRMVVDHGIKSWSVVAGNLFAEVAGTLRTGNQCRARWQQTLDPSLKKDLWTEEEEKIIHDAQLRMGNRWADIAKLLKGRSESAVKSHWYATVHKNIRRKENVGREGGXXXXXXXXNEVGPTGGMDSWGAPGGNNXGKNNSEIGGSISSESHTNSIFGSRFLGGDGYAYPKPNLVPGEAGADGSYPTAQACQVAEGE---GEHLMPSVVAGLGVCRGIAP--TFAASTAATTTSMGQRAPTI-SSEAARGHEFTSP-ALVPT-SSFSSSTAATASAELGQWQVSNSSKQGLPNQPVFESFVKKERATLP----ITYAELNKTAGTNEGGGSGSCSGSTGAIESVESGSMHSAAPAGNTAVNGQQSNRFRGKIGAV---------SSSLEIEQAPIDAHLTSSSVATKSPPLPA 1539
+G+G+GD+ GED+HLG+ PD RPWS+ EDE I RMVV+ GIK WSV+AGNL+ EVAGTLRTG QC+ARWQ LDPS K WTEEEE IIHDA LR+GNRW++IAKLL GR++SAVK++WY T HKNI R +N+ GG + G T S N + IG ES + S F Y PKP++VPGEAG G C G GE + VVAGLGVC GI P A +TAA + GQ P + ++ AA G E +SP ALVP+ +S +TA A +WQVS+ +K+G+ +Q S K E AT P Y EL+K G GS S +G GA+ H A A AV +R G G V +SSL + + ++AH S++V TKSPPLPA
Sbjct: 98 EGNGDGDEACGEDTHLGARAPDLRPWSRMEDEAIARMVVERGIKRWSVIAGNLYVEVAGTLRTGKQCKARWQHMLDPSQKNAPWTEEEENIIHDAHLRLGNRWSEIAKLLTGRTDSAVKNYWYTTAHKNIGR-QNMEIRGGDGDGRSDPSRSGDTEATGS----------SNINPIG--PGGESVATNGGASGF-----YDDPKPDIVPGEAGIAGG------CSAPVGHVEGGECQLQPVVAGLGVCGGIGPPPAMAVATAAAVATHGQGMPPVGAATAAPGVESSSPPALVPSLASTLGTTAPPAVDGNNRWQVSDDNKRGVVSQTAIGSLTKTE-ATNPRKAAACYGELDKKVAGENGDGSAS-TGDAGAVHG-----RHLATSATTGAVEEAPGHRRDGSRGVVLGPGGVAPATSSLLEQASVVNAHAVSNTV-TKSPPLPA 511
BLAST of mRNA_P-fluviatile_contig14.2285.1 vs. uniprot
Match: A0A835ZPI2_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPI2_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.070e-37 Identity = 60/111 (54.05%), Postives = 91/111 (81.98%), Query Frame = 1
Query: 334 RPWSQKEDETITRMVVDHGIKSWSVVAGNLFAEVAGTLRTGNQCRARWQQTLDPSLKKDLWTEEEEKIIHDAQLRMGNRWADIAKLLKGRSESAVKSHWYATVHKNIRRKE 666
R WS++ED+ I+ +V +G+K WS++A NL EV G +R+G QCR RW LDPSL++D WT+EEE++I++AQ R+GN+WA+IAKLL GR+++A+K+HWY+T+ KN+RR++
Sbjct: 3 RAWSKREDDAISGLVTHYGVKRWSLIAQNLSKEVEGAVRSGKQCRTRWLNHLDPSLRRDPWTDEEEQVIYNAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNMRRRQ 113
BLAST of mRNA_P-fluviatile_contig14.2285.1 vs. uniprot
Match: A0A835YS16_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS16_9STRA) HSP 1 Score: 145 bits (365), Expect = 4.330e-37 Identity = 60/107 (56.07%), Postives = 86/107 (80.37%), Query Frame = 1
Query: 334 RPWSQKEDETITRMVVDHGIKSWSVVAGNLFAEVAGTLRTGNQCRARWQQTLDPSLKKDLWTEEEEKIIHDAQLRMGNRWADIAKLLKGRSESAVKSHWYATVHKNI 654
R W++ EDE I R+V +HG+K WS+VA +L E+ G +R+G QCR RW LDPSL+K+ WT EEE++I+DAQ R+GN+WA+IAKLL GR+++A+K+HWY+T+ KN+
Sbjct: 3 RSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109
BLAST of mRNA_P-fluviatile_contig14.2285.1 vs. uniprot
Match: A0A7S2ST59_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST59_9STRA) HSP 1 Score: 147 bits (372), Expect = 9.890e-35 Identity = 65/127 (51.18%), Postives = 94/127 (74.02%), Query Frame = 1
Query: 325 PDHRPWSQKEDETITRMVVDHGIKSWSVVAGNLFAEVAGTLRTGNQCRARWQQTLDPSLKKDLWTEEEEKIIHDAQLRMGNRWADIAKLLKGRSESAVKSHWYATVHKNIRR------KENVGREGG 687
P+ R WS+KED+ I R+V HG K W+V+A L E++G R+G QCR RW LDP++KK+ W+E EE+II+DAQ R+GN+WA+IAKLL GR+++A+K+HWY+T+ +N+RR ++ G EGG
Sbjct: 37 PERRAWSRKEDDAIVRLVNRHGTKRWAVIAQELNGEISGVFRSGKQCRTRWLNHLDPAIKKEPWSEHEERIIYDAQQRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNMRRLAKEISMDDEGAEGG 163
BLAST of mRNA_P-fluviatile_contig14.2285.1 vs. uniprot
Match: A0A7S2G8M0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G8M0_9STRA) HSP 1 Score: 140 bits (352), Expect = 2.230e-32 Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = 1
Query: 325 PDHRPWSQKEDETITRMVVDHGIKSWSVVAGNLFAEVAGTLRTGNQCRARWQQTLDPSLKKDLWTEEEEKIIHDAQLRMGNRWADIAKLLKGRSESAVKSHWYATVHKNIRR 660
P+ R W++KED+ I R+V HG K W+ +A L E+ G R+G QCR RW LDP++KK+ W++ EE II+DAQ R+GN+WA+IAKLL GR+++A+K+HWY+T+ +N+RR
Sbjct: 48 PERRAWTRKEDDAIVRLVKRHGTKRWACIAQELNTEIPGVFRSGKQCRTRWLNHLDPAIKKEPWSDTEEHIIYDAQHRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNMRR 159
BLAST of mRNA_P-fluviatile_contig14.2285.1 vs. uniprot
Match: F0Y4P7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4P7_AURAN) HSP 1 Score: 132 bits (331), Expect = 3.380e-32 Identity = 55/107 (51.40%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 334 RPWSQKEDETITRMVVDHGIKSWSVVAGNLFAEVAGTLRTGNQCRARWQQTLDPSLKKDLWTEEEEKIIHDAQLRMGNRWADIAKLLKGRSESAVKSHWYATVHKNI 654
R WS+KED+ I R+V+ HG K W+V++ L E+AG R+G QCR RW LDP++K++ W+E EE +I++AQ R+GN+WA+IAKLL GR+++A+K+HWY+T+ +N+
Sbjct: 27 RAWSRKEDDAIVRLVMTHGTKRWAVISQELNKELAG-FRSGKQCRTRWLNHLDPAIKREPWSEGEESVIYEAQHRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNM 132
BLAST of mRNA_P-fluviatile_contig14.2285.1 vs. uniprot
Match: A0A3F2RS30_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RS30_9STRA) HSP 1 Score: 141 bits (356), Expect = 6.810e-32 Identity = 61/117 (52.14%), Postives = 89/117 (76.07%), Query Frame = 1
Query: 310 LGSNTPDHRPWSQKEDETITRMVVDHGIKSWSVVAGNLFAEVAGTLRTGNQCRARWQQTLDPSLKKDLWTEEEEKIIHDAQLRMGNRWADIAKLLKGRSESAVKSHWYATVHKNIRR 660
G +T + R W++KED+ I R+V ++G K WSV++ +L E GT RTG QCR RW LDP++KKD WT EEE+II DAQ R+GN+WA+I+KLL GR+++A+K+HWY+++ + +RR
Sbjct: 21 AGGSTYERRAWTRKEDDAIIRLVEEYGTKRWSVISDHLNGENHGTERTGKQCRTRWLNHLDPTIKKDPWTTEEEQIIEDAQTRLGNKWAEISKLLPGRTDNAIKNHWYSSMRRTMRR 137
BLAST of mRNA_P-fluviatile_contig14.2285.1 vs. uniprot
Match: A0A3M6VGP6_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGP6_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.360e-31 Identity = 61/113 (53.98%), Postives = 88/113 (77.88%), Query Frame = 1
Query: 322 TPDHRPWSQKEDETITRMVVDHGIKSWSVVAGNLFAEVAGTLRTGNQCRARWQQTLDPSLKKDLWTEEEEKIIHDAQLRMGNRWADIAKLLKGRSESAVKSHWYATVHKNIRR 660
T + R W++KEDE I R+V ++G K WSV++ +L +E GT RTG QCR RW LDP++KKD WT EEE+II DAQ R+GN+WA+I+KLL GR+++A+K+HWY+++ + +RR
Sbjct: 18 TYERRAWTRKEDEAIIRLVDEYGTKRWSVISDHLNSENHGTERTGKQCRTRWLNHLDPTIKKDPWTAEEEQIIEDAQTRLGNKWAEISKLLPGRTDNAIKNHWYSSMRRTMRR 130
BLAST of mRNA_P-fluviatile_contig14.2285.1 vs. uniprot
Match: A0A484E484_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E484_BRELC) HSP 1 Score: 140 bits (352), Expect = 1.540e-31 Identity = 60/118 (50.85%), Postives = 91/118 (77.12%), Query Frame = 1
Query: 307 HLGSNTPDHRPWSQKEDETITRMVVDHGIKSWSVVAGNLFAEVAGTLRTGNQCRARWQQTLDPSLKKDLWTEEEEKIIHDAQLRMGNRWADIAKLLKGRSESAVKSHWYATVHKNIRR 660
++ +T + R W++KED+ I R+V ++G K WSV++ +L +E GT RTG QCR RW LDP++KKD WT EEE+II DAQ R+GN+WA+I+KLL GR+++A+K+HWY+++ + +RR
Sbjct: 12 NVRGSTYERRAWTRKEDDAIIRLVEEYGTKRWSVISDHLNSENHGTERTGKQCRTRWLNHLDPTIKKDPWTTEEEQIIEDAQTRLGNKWAEISKLLPGRTDNAIKNHWYSSMRRTMRR 129 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2285.1 >prot_P-fluviatile_contig14.2285.1 ID=prot_P-fluviatile_contig14.2285.1|Name=mRNA_P-fluviatile_contig14.2285.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1018bp MSALSRPKPALGLGAAAEDKSTAPSSQLQPQILGENATTLPAGGGSHHNCback to top mRNA from alignment at P-fluviatile_contig14:2455941..2460365+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2285.1 ID=mRNA_P-fluviatile_contig14.2285.1|Name=mRNA_P-fluviatile_contig14.2285.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4425bp|location=Sequence derived from alignment at P-fluviatile_contig14:2455941..2460365+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:2455941..2460365+ >mRNA_P-fluviatile_contig14.2285.1 ID=mRNA_P-fluviatile_contig14.2285.1|Name=mRNA_P-fluviatile_contig14.2285.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6108bp|location=Sequence derived from alignment at P-fluviatile_contig14:2455941..2460365+ (Porterinema fluviatile SAG_2381)back to top |